KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117019456
Entry
117019456         CDS       T07722                                 
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
  KO
K08060  MHC class II transactivator [EC:2.7.11.1]
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04612  Antigen processing and presentation
rfq05145  Toxoplasmosis
rfq05152  Tuberculosis
rfq05164  Influenza A
rfq05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    117019456 (CIITA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    117019456 (CIITA)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    117019456 (CIITA)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    117019456 (CIITA)
  09163 Immune disease
   05340 Primary immunodeficiency
    117019456 (CIITA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rfq01001]
    117019456 (CIITA)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:rfq04054]
    117019456 (CIITA)
Enzymes [BR:rfq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     117019456 (CIITA)
Protein kinases [BR:rfq01001]
 Serine/threonine kinases: Other
  TAF1 family
   117019456 (CIITA)
Pattern recognition receptors [BR:rfq04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   117019456 (CIITA)
SSDB
Motif
Pfam: NACHT LRR_6 NLRC4_HD2 LRR_4 LRR_8 LRR_14 LRR_9 CARD
Other DBs
NCBI-GeneID: 117019456
NCBI-ProteinID: XP_032957033
Ensembl: ENSRFEG00010013899
UniProt: A0A671FE15
Position
15
AA seq 1211 aa
MNHFQTILAQVRMLLSSHQPSQVQALLDNLLEEELLSREYHCALLHEPDAEALARKISLT
LLQKGDPDLALLKWAWSGLQVPASERALGYKDHGGSGQCAAMELEPLEGGYLELLNSSAD
PLQLYHLCDQLDLAGEEEIELCSEPDTDTINCEQFSRLLCAIEDDEETREAYANIAELDQ
YVFQDSQFEGLSKDIFIEHIGLEEIISESVDVLEEAGQKRQKRPFPEELPVDLKHRKLAE
PITVPVVTGTFLVGPVSDSSALPCPSPPALFSKDPASSQTQPEETTLPPAPPSGSLLSCL
SLPAGSFQIIPALPTLPQGLWQISGAGTGVSSIVIYQGEMPQTSQAPPSSSPAVHSLPKT
PERPGSTSPFAPSAADDLPSMPEAALTSRASTTEDELSPTQCPAASEVSSKLPKWPDSVE
QFCRSLRDKYQAEPAGPEGILVEVELVRARLERSSSKSQERELANLDWAERQPARGGLAE
VLLAASDRRQPRETQVIAVLGKAGQGKSCWARAVSRAWACGQLPQYDFVFHLSCHCLDRP
GDTYRLQDLLFSLGPQPLPVDSEVFGHILRRPDRVLLILDAFEELEAQDGLLHGACGPSA
AEPRSLRGLLAGLLQRKLLRGCTVLLTARTRGRLAQSLSKADALFQMPGFSAEQAETYVL
CYFERSGATHHQDRALALLQDQPLLLSHSHNPTVCRAVCQLSKALLELGQEAELPSTLTG
LYVGLLGPAARDSPPGALQALAKLAWELGRRHHSTLQEDQFPSEEVRTWAVARGLVQPVP
EAPEMELAFPSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLV
GLVFQPRARCLGALAGPVALTLVDRKKKMLTRYLKRLQPGTLQAGRLLELLHCAHEALDA
GLWQHVVQGLPARLSFLGTRLTPPDTHVLGSTLQAAGRDFSLDLRNTGIDPSGLGSLVGL
SCVTHFRAALSDTVELWESLRQHGEAKLLQAVEDKFTIEPFKAKSMKDVEDLGNLVQIQR
TTSSSEDTARELPAVRDLKKLEFALGPVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKI
GDEGVAQLSATFPQLKALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNCICDV
GAESLAHVLPDMVSLRILDVQYNKFTASGAQQLTASLRKCPHVETLAMWTPTIPFGVQEH
LQQLDSRISLR
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgaaccacttccagaccatcctggctcaggtccggatgctgctctccagccatcagccg
agccaggtgcaggccctcctggacaacctgctggaggaggagcttctctccagggagtac
cactgcgccctgctccatgagcctgatgctgaggctctggccaggaagatctccttgacc
ctgctgcagaaaggagacccggacttggccctcttgaagtgggcctggagtgggctgcag
gtgccagcatccgagagggccctcggctacaaggaccatggtggcagtggacagtgtgcc
gccatggagttggagcctctagaaggtggctacctggagctccttaacagcagtgctgac
cctttgcagctctaccacctctgtgaccagttggacctggctggggaagaagagatcgag
ctctgctcagaacccgacacagacaccatcaactgtgaacagttcagcaggctgttgtgt
gccatagaagatgatgaagagaccagggaagcgtatgccaatatcgccgaactggaccag
tacgtgttccaggactcccagttcgagggcctgagcaaagacattttcatcgagcacata
ggattggaagaaataatcagcgagagtgtggacgtgctggaggaagcaggacaaaaacgt
cagaaaagacccttcccagaggagctgcctgtggacctgaagcacaggaagctcgccgag
cccatcaccgtgcccgtggtgactggtactttcctggtggggccagtgagtgactcctca
gctctgccctgcccgtcaccacctgctctgttcagcaaggatccggcatccagccagacc
cagccggaagaaaccaccctgccacccgcgcccccctccggctccttgttgagctgcctg
agtctcccggctggatccttccagatcatccccgctctccccactctgccccaggggctc
tggcagatctcaggcgctgggacaggcgtctccagtatagtcatctaccaaggtgagatg
ccccagaccagccaagcacccccatccagcagtccagctgtccacagcctcccgaagacc
cctgagcggcccggctccaccagccccttcgccccatccgcagctgatgacctgcccagc
atgccggaagcagccctgacctcccgtgcaagcacaacagaggatgagctgtcccccacc
caatgcccggcagcttccgaggtttccagcaagcttccaaaatggcctgacagtgtggag
caattctgccgctccctacgggacaagtaccaggctgagcccgcaggcccggaaggcatc
ctggtggaggtggagctggtgagggcacggctggagaggagcagcagcaagagccaggag
agggagctggccaacctggactgggcagagcggcagccggcccgcggggggctggctgag
gtgctgctggctgccagtgaccgccggcaaccacgtgaaacgcaggtgattgccgtgctg
ggcaaggcaggacaggggaaaagctgctgggcccgggcggtgagccgggcctgggcctgt
ggccagctgccgcagtacgatttcgtcttccacctgtcctgccactgtttggaccggcca
ggggacacctaccgcctgcaggaccttctcttctccctgggcccgcagccactgccggtg
gacagtgaagtctttggtcatatcttgaggaggcccgaccgcgtcctgctcatcctggac
gccttcgaggagctggaagcccaggacggcctcctgcacggtgcatgcggaccctcggcg
gccgagccccgctcgctccgggggctgctggccggcctcctccagcgcaaactgctccgg
ggctgcactgtgctgctcacagcccggacccggggccgcctggcccagagcctgagcaag
gcggatgccctgttccagatgcccggcttctcagctgagcaggccgagacctatgtgctg
tgctactttgagcggtcgggggccactcaccaccaagacagagccctggcgctcctccag
gaccagccacttctcctcagtcacagccacaaccccacggtgtgccgggcagtgtgccag
ctgtcaaaggccctcctggagctgggacaggaggccgagctgccctccacgctcacggga
ctctacgttggcctgctaggcccagcagcccgggacagccccccaggggccctgcaggca
ctggccaagctggcctgggagctgggccgcagacaccacagcaccttgcaggaggaccag
tttccatcggaggaggtgaggacctgggctgtggccagaggcttggtgcagcctgtgccc
gaggccccagagatggagctggccttccccagcttccttctgcagtgcttcctgggagcc
gtgtggctggctctgagcagtgagattaaggacaaggagttgccacaatatttggcactg
accccgaggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtc
gggctggtcttccagcctcgcgcccgctgcctgggagccctggcggggccagtggcgctc
accttggtggacagaaagaagaagatgctcaccaggtacctgaagcggctgcagccgggc
acactgcaggcagggcggctgctagagctgctgcattgtgcccacgaggcgctggatgct
ggcctttggcagcatgtggtgcaggggctccccgcccgtctctccttcctgggcacccgt
ctcacgcctccggatacccatgtgctgggcagcaccctgcaggctgcgggccgcgacttc
tccttggacctccgtaacactggcattgacccctctggactgggaagcctcgtgggactc
agctgtgtcacccatttcagggccgccttgagtgacacggtggagctgtgggagtcccta
cgacagcatggggaggccaagctactccaggcggtagaagacaagttcaccattgagcct
ttcaaggccaagtccatgaaggatgtggaagacctgggcaaccttgtgcagatccagagg
acaacaagttcctcagaagacacagctagggaactccccgctgtccgggacctaaagaag
ctagagtttgcgctgggccctgtcttgggcccccaggctttccctaaactggtgaggatc
ctcgaggccttttcctcccttcagcatctggacctggactcactgagtgagaacaagatt
ggggacgagggtgtcgcgcagctctcagccaccttccctcagctgaaagccctggagaca
ctgaacctgtctcagaacagcatcacggacgtgggcgcctgcaagctcgcagaggccctg
ccctccttggctgcatccctccttaggctgagcttgtacaataactgcatctgtgacgtg
ggagccgagagcctggcacacgtgcttccagacatggtgtccctgcggatcctggatgtc
cagtacaacaagttcacggcctccggggcccagcagctcacagccagcctgagaaagtgc
cctcatgtggagacgctggcgatgtggacgcccaccattccgtttggcgtccaggagcat
ctgcagcagctggactctcggatcagcctgagatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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