KEGG   Rugositalea oryzae: RHPLAN_01160
Entry
RHPLAN_01160      CDS       T04290                                 
Name
(GenBank) CarD family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhz  Rugositalea oryzae
Pathway
rhz02020  Two-component system
rhz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RHPLAN_01160
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHPLAN_01160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhz03000]
    RHPLAN_01160
Transcription factors [BR:rhz03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    RHPLAN_01160
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 HTH_3 HTH_26 HpcH_C HVO_A0261_N HTH_37 Crp Sigma70_r4 LacI
Other DBs
NCBI-ProteinID: AMN38581
Position
132389..133060
AA seq 223 aa
MTPPTNLFSVFPETLAAKLFANARQTKLAADEVLFVAGDPGDGCYRVEQGLLKVSMIAPS
GAERILAIVGPGGIVGELSTIDGLPRSASVAAVRESELTFVSRAAFQTFAEDHPQVYKDL
VTLLASRLRDTDGVVAAGSFLPLKGRVARALLDLAEAFGHDVGQGRVLIRQKVSQSDVAA
MAGIARENVSRILNDWIRDKLVSRLSGYYCLENKKKLERESAI
NT seq 672 nt   +upstreamnt  +downstreamnt
atgaccccgcccaccaaccttttttcggtgtttcccgagactctggcggcgaagcttttc
gccaatgccagacagacgaagctcgccgcggatgaggtgctttttgtcgcaggggacccc
ggcgacggctgctaccgggtcgagcaaggcctgctcaaggtcagcatgatcgcgccgtcc
ggcgccgagcggattctggccatcgtcggacctggcggcatcgtcggcgagctttcgacc
atcgacggcctgccgcgctcggcttcggtggccgctgtccgcgagtcggagctgaccttt
gtcagccgcgcggcgttccagactttcgccgaggatcatccgcaggtttacaaggatctc
gtgacgctactggcctcgcggctgcgcgacaccgatggcgtggtggcggcgggaagcttc
ctgccgctcaagggccgtgtcgctcgcgcgctgctcgatctggctgaagcgttcggccat
gacgtgggccagggccgcgtcctcatccgccagaaggtcagccagagcgacgtggccgcc
atggcgggcatcgcccgcgagaatgtcagccgcattctcaacgactggattcgcgacaag
ctggtgagccggctgtcgggctactactgcctcgaaaacaagaagaagctcgagcgggaa
agcgccatctaa

  All links  
Gene (11)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system