KEGG   Rugositalea oryzae: RHPLAN_12620
Entry
RHPLAN_12620      CDS       T04290                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhz  Rugositalea oryzae
Pathway
rhz02020  Two-component system
rhz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RHPLAN_12620
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHPLAN_12620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhz03000]
    RHPLAN_12620
Transcription factors [BR:rhz03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    RHPLAN_12620
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 HTH_24 HTH_3 WHD_RecQ_mid_bact Fe_dep_repress HTH_5 Phage_rep_O DUF5343
Other DBs
NCBI-ProteinID: AMN39719
Position
complement(1470290..1471024)
AA seq 244 aa
MARSPKTRSVKSSTSSKAASRAVFDPAVFLATAALGRDLSNHSKNEVIFAQGDDADAVFY
IKKGKVKVAVVSKDGKEAVVALLGPDQFVGEGCLIGQPKRLATASAMTECETMRVTKTEI
QRLLQDEPTFSQMFVSHLLVRNARIEEDLVDQLFNSTEKRLARLLLLLANFGKEGRTEPI
LAKISQETLAEMIGTTRSRVSHFMNRFRKMGFIDYNGHLEVHSSLVGVLLADQPRTVSGS
AESH
NT seq 735 nt   +upstreamnt  +downstreamnt
atggctcgttcacctaaaacaaggtccgtaaagtcgagcacaagtagcaaggcagcaagc
agggcggtgtttgatcctgcggtgtttcttgcaacggcggctcttggtcgcgacctttcc
aatcattcaaagaacgaagtcattttcgctcagggcgatgatgcagatgcggttttctat
atcaagaaaggcaaggttaaagtcgccgttgtatcgaaggatggaaaggaagccgtcgtc
gcactcttggggccagaccaatttgttggggaaggctgcctgatcggtcagcctaagcgt
ttagcgacagcgtcagcgatgacggaatgcgagacgatgcgagtgaccaaaaccgagatc
cagcggctgcttcaagatgagcccacattttcgcaaatgttcgtttcacatcttctggtg
aggaatgcccggattgaggaagacctggtcgatcaacttttcaactcgaccgagaaacgg
ttggcgcggctgttactgctattggcaaattttggcaaagaagggcgaacggagcccatt
ctcgcaaagatcagtcaggaaactctcgctgagatgattggcacgacgcgatcacgcgtg
agtcactttatgaataggttccgcaaaatgggtttcattgattacaacggacaccttgaa
gttcacagttctttggtgggcgttcttctggccgatcagcctcgcaccgtgagcggctcc
gccgagtcacattaa

  All links  
Gene (3)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (13)   

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