KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111956749
Entry
111956749         CDS       T05762                                 
Name
(RefSeq) fizzy-related protein homolog
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110  Cell cycle
salp04120  Ubiquitin mediated proteolysis
salp04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111956749
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111956749
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    111956749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111956749
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     111956749
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR19_1st EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st eIF2A Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_RIG_1st Beta-prop_SCAP ELYS-bb Ge1_WD40 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 111956749
NCBI-ProteinID: XP_023833091
Position
LG32:35587718..35595508
AA seq 495 aa
MDQDYECRLLRQINIQNENASPLKAIDTVRALTPTNSPLSSPSKHGDRFIPSRAGANWSV
NFHRINENEKSHNQNRKTKDGTTDTSKADGLAYSALLKNELLGAGIEKVQDPQSEDRRLQ
PSTPAKRSLFSYSVSAKRSLPEDGNTVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFKV
LDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWS
ERGNLVAVGTHKGYVQIWDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRVILQRDI
RAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAAV
KAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVSTH
GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMRS
TKESVSVLNLFTRIR
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggaccaggactatgagtgtcggctgctcaggcagatcaacatccagaatgagaacgcc
agccctttaaaggccatagatacagtacgagccctgacacccaccaactcccccctgtcg
tcaccaagcaaacatggcgaccgcttcatcccctcccgcgccggcgccaactggagcgtt
aacttccaccgcatcaacgagaatgagaagtctcacaatcagaacaggaagacaaaggat
ggcacaacagacactagcaaagcggacggcctggcgtactctgccctactgaagaacgag
ctgctgggggcaggcatagagaaggtccaggacccccagtcagaagaccgccgcctccag
ccctccacccccgccaagaggagcctcttcagttattctgtcagtgccaaacgatctcta
cccgaggatggtaacacagtgtctccatactccttgtctcctgttagcagcaacagtcag
aagctgttacggtcacctaggaaacccactcgtaagatctctaagatccccttcaaggtg
cttgatgctccagagctgcaggatgacttctacctcaacctggtggactggtcctccctc
aacgtcctcagtgtcggcctgggaacctgcgtctacctctggagcgcctgcactagccag
gtgacgcgtctgtgtgacttgtcagtggaaggggactctgtcacgtcagtgggctggtca
gagagggggaacttagtagcggtggggactcataagggctatgtacagatctgggacgcg
gcagcagggaagaaactgtcagtactggagggacacacagccagagtgggtgcgttggcg
tggaatgccgaccagttgtcgtctggcagtcgtgacagggttatcctgcagagggacatc
cgggccccgcccctccagtcagaacgtcgtctccagggacaccgacaggaagtttgcggc
ctcaagtggagcacagaccaccagctactggcctcagggggaaatgacaacaagctgctg
gtatggaaccactccagcgttctcccggtgcagcagtacacggagcacctggcagcagtg
aaggccatcgcctggtccccccatcagcatggcctgctggcgtctggagggggcacggcc
gaccgctgcatccgcttctggaacaccctgacaggccagcccctgcagtgcaccgacacg
ggctcccaggtctgcaacctggcctggtccaagcacaccaatgaactggtaagcacacac
ggctactcccagaaccagatcttggtgtggaagtacccttccctcacacaggtagccaaa
ctcacaggccactcctacagagtgctttacctggccatgtccccagacggagaggccatc
gtcacaggagccggagacgagacgctgcgcttctggaacgtcttcagcaagatgaggtcc
accaaggagtctgtatctgttctgaacctgttcaccaggatccggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (27)   
   Pfam (27)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system