KEGG   Sphingomonas cannabina: LZK98_05000
Entry
LZK98_05000       CDS       T08607                                 
Name
(GenBank) ATP-binding cassette domain-containing protein
  KO
K16012  ATP-binding cassette, subfamily C, bacterial CydC
Organism
scab  Sphingomonas cannabina
Pathway
scab02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:scab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    LZK98_05000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:scab02000]
    LZK98_05000
Transporters [BR:scab02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    LZK98_05000
SSDB
Motif
Pfam: ABC_tran ABC_membrane AAA_21 AAA_16 SMC_N Dynamin_N AAA_25 DLIC MobB nSTAND1 AAA_29 RsgA_GTPase Roc AAA_22 FeoB_N MMR_HSR1 nSTAND3 PduV-EutP
Other DBs
NCBI-ProteinID: UIJ46302
Position
1003764..1005386
AA seq 540 aa
MTSPLDRLLARERWRERRNLRHAAALAALVCGASVVLLGLSGWFITAAALAGAAGLAAAQ
AFNYMLPSAAIRLLAIVRTGARYGEALAGHAASLRALARIRPVLFRAITAAPVAHALTYS
AGDASARLVNDVAAVEQDMVRRSAVSGATAAAITGIGLVLMGGWAAALGTLLCLVATLML
GARLARRIEAPGREVQHANGQLKHLLGELAEAAPELRCYTLEGWASATVSEASRRLADAQ
VAKARASGWFTLLQASAIATAAGTALSLAAPSGAPVAALAALAAAMAIDGAAPLLRRFAE
RGSVRQAEDRLAAILVEGCQQQDVRLALDGEASLQFLRPASSRLVSGERIALVGNSGSGK
TSLVEQLLGLRVAPPGRAKLNGIDIAYLPLETLRSAFAWLPQDAMLLAGTVRDNLLLADP
DATDERLWQALHDAALDGRIAALLHGLDTWIGDNGSRLSGGERRRLALARAYLVDAPWLL
LDEPTEGLDVATEASIADRLTRRLDRTGQGLVLVSHRRDLIQACANSMVAIAPERLGEAA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgacgagcccgctcgatcgactgcttgcccgcgaacggtggcgcgaacgcaggaatctc
cggcatgccgccgcgcttgccgcgctggtgtgcggagcgtcggtcgtgctgctggggctc
tccggctggttcatcaccgccgctgcgctggcgggcgctgccgggctcgccgcggcacag
gcattcaactacatgctgccgagcgccgcgatccgcctgctcgcgatcgtccgcaccggc
gcgcgctatggcgaggcgctggccggccatgcggcatcgctccgcgcgctcgcgaggatc
aggccggtcctgttccgcgctatcaccgccgcaccggttgcccatgccctcacctattcg
gccggcgacgcgagcgcgcgccttgtcaacgacgtcgcggcggtggagcaggacatggtc
cgccgctcggccgtatcgggagccaccgcggcggcgataacggggattggtctcgtcctg
atgggcggatgggccgcggcactcggcaccttgctatgccttgtcgcgacgctgatgctc
ggcgcccggctggcgcggcggatcgaggcgccggggcgcgaggtccagcacgccaacggc
cagctgaagcacctgctcggcgagctggcggaggccgcaccggaattgcgctgctatacc
ctggaaggctgggcgagcgcgaccgtctccgaagcgagccggaggctcgcggacgcgcag
gtcgccaaggcgcgcgcctccggctggttcaccttgctgcaggcgagcgcgatcgcgact
gccgccggcacggcgctgtcgcttgccgcaccctccggcgcgccggtggcggcactcgcc
gcgctggccgcggcgatggcgatcgacggcgccgcgccgctgctgcgccgtttcgcggaa
cgcggatcggtgcgtcaggccgaagatcgcctggccgcgatattggtcgaaggatgccag
caacaggatgtccgcctcgccctcgacggcgaagcttcgctgcaattcctccgcccggcg
tcctcacggttggtttcgggcgagcggatcgccctcgtcggaaattccggcagcggaaag
accagtctggtcgagcagctcctggggctccgtgtcgctcctccggggcgggcgaagctg
aatggcatcgacatcgcctatcttccgctcgagacgctgcgcagtgccttcgcctggttg
ccgcaggacgcgatgctgcttgccggaaccgttcgcgacaatctgctgctggccgatccc
gatgcgaccgacgagcggctctggcaggcgcttcacgatgctgcgctcgacggccgaatc
gcggcgttgctgcacgggctggatacctggatcggagacaacggcagccggctctccggc
ggtgagcgccggaggctcgcgctggcacgcgcctatctcgtggacgcgccctggctgctg
ctcgatgagccgaccgaggggctggacgtcgcaaccgaagcctccatcgccgatcgtttg
acacgacggcttgaccggaccggccaaggattggtgctggtcagccaccggcgtgacctc
atccaggcttgcgccaacagcatggtcgccatcgcgccggagcggctcggcgaagccgct
tga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (18)   
   Pfam (18)   
All databases (19)   

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