KEGG   Salvelinus namaycush (lake trout): 120044128
Entry
120044128         CDS       T07522                                 
Symbol
aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120044128 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snh03400]
    120044128 (aptx)
Enzymes [BR:snh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     120044128 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     120044128 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     120044128 (aptx)
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120044128 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     120044128 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4 zf-C2H2 zf-C2H2_6
Other DBs
NCBI-GeneID: 120044128
NCBI-ProteinID: XP_038844677
UniProt: A0A8U0QJX3
Position
1:7765751..7767491
AA seq 348 aa
MSICLLISKNGRHKPIHLPHLQTVVLGRGPETTIKDKKCSREQVELKADCNKGYISVKQL
GFNPTSVNSEVVGKGNQVEMRSGQQLHMVNELYPYTVCFKEDPSNSQSSVGTKRPRGPAS
EERELHREPPGHKVTRKTEDSTQCKHGGSTSTNTRPEPQTTEKTETLGYWSQGLKASMQD
PKMQVYKDDRVVVIMDKYPKAHYHWLVLPWESIPSLKTLRREHCDLLRHMNQVADRIVQQ
QCPDTGLLHFRQGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESQEVIQM
LEKDGKVTIKEGTNELLKLPLCCHVCGMALSTIPQLKEHLKSHPYGRL
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtctatttgtttactgatcagcaaaaatggaaggcataaaccgattcatctacctcac
ctacagacagttgtcttgggtcggggtccagaaactacgataaaagacaaaaaatgttcc
agggagcaggttgaactcaaggcagactgcaacaaagggtatatcagtgtaaaacaactg
ggtttcaaccccactagtgtgaactctgaggtggtgggtaaaggcaaccaagtggagatg
agatctggccagcagctgcacatggtcaatgagctgtacccgtatactgtgtgcttcaaa
gaggatccatccaactctcagtccagtgtgggcaccaagaggccccgtgggcctgcctca
gaggagcgggagcttcacagagagccccctgggcataaagtaacaaggaaaacagaggac
tccactcagtgcaagcatggagggtccacctccactaacacacggcctgaacctcaaaca
acagagaaaactgaaactttaggatattggagccaaggattgaaagcctcaatgcaagac
cccaaaatgcaggtctacaaggatgacagagtagttgttatcatggacaagtaccccaag
gctcactaccactggctggtcctgccctgggagtccatccccagtctgaagacactgcgc
agggagcactgtgatctgttgaggcacatgaaccaggtagcagacaggattgtacaacaa
cagtgccccgatactggcctgctacacttccgccagggctaccacgccatccccagtatg
agccatgtccatctacacgtgatcagccaggactttgactccccttgtttaaagaacaag
aaacactggaattcattcacaactgactatttcatagaatctcaagaagtcattcagatg
ctggaaaaggatgggaaggtcaccataaaagaagggacaaatgagttgttgaaactacct
ctctgctgtcacgtgtgtggcatggcgctgtccaccataccacaacttaaggagcacctg
aaatctcacccatatggtagattgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (13)   

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