KEGG   Sphingopyxis sp. 113P3: LH20_13770
Entry
LH20_13770        CDS       T04069                                 
Name
(GenBank) hypothetical protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp02020  Two-component system
sphp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LH20_13770
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH20_13770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sphp03000]
    LH20_13770
Transcription factors [BR:sphp03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    LH20_13770
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 GntR HTH_24 HVO_A0261_N HTH_IclR HTH_8 DUF8462 HTH_11 HTH_36 MarR HTH_3 TrmB HTH_10 HTH_DeoR HTH_CodY Phage_CI_repr
Other DBs
NCBI-ProteinID: ALC13020
Position
complement(2753562..2754227)
AA seq 221 aa
MQRSYHFALAERTGLARAERERLAAIAPVRSIADGQFVQHQGDPGDTFWVVCEGHVLAGR
HAEDGRFTAFAVLGPGDMFGELAFFAGVPRQVDAIASGPARLIAIDRPLLRRLMAEDIGW
AELLLRSLSRQLAVTLDIIDAERRLPTADRLVQLLAAMAADAPDRSTVRATQQQLADLLG
VSRVTLGAALRELTARGLVEPGYGRIRVATSLSQRSGARYS
NT seq 666 nt   +upstreamnt  +downstreamnt
atgcaaagaagttatcactttgcgcttgccgagcggaccgggcttgcgcgcgccgagcgc
gagcggcttgcagcaatcgcgccggtgcgcagcatcgccgatgggcagttcgtgcagcac
cagggcgaccctggcgacacgttctgggtggtctgcgaggggcatgtccttgccggccgt
catgccgaggacggacgcttcaccgcctttgccgtgctggggccgggcgacatgttcggc
gaacttgccttttttgccggcgtaccccgccaggtcgacgcgatcgcgagcggacctgcg
aggctgatcgcgatcgaccggccgctgctgcgccggctgatggcggaggatatcggctgg
gccgaactcctgcttcgcagcctgtcgcgccagcttgctgtcacgctcgacatcatcgac
gccgagcggcgtctgcccaccgccgaccggcttgtgcagctgctcgctgcgatggcggca
gacgcgcccgatcgcagcacggtccgcgcaacgcagcagcagctcgcggatctcctcggg
gtctcgcgtgtgaccctcggggcagcgcttcgcgagctcactgcgcgcgggctggtcgag
ccgggctatggccgcatccgtgtcgccacctcgctttcgcagcgcagcggcgctcggtat
agttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (21)   

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