KEGG   Rhizorhabdus wittichii RW1: Swit_4116
Entry
Swit_4116         CDS       T00538                                 
Name
(GenBank) putative transcriptional regulator, Crp/Fnr family
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02020  Two-component system
swi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Swit_4116
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_4116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:swi03000]
    Swit_4116
Transcription factors [BR:swi03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    Swit_4116
SSDB
Motif
Pfam: HTH_Crp_2 cNMP_binding MarR_2 HTH_11 HTH_36 Crp HVO_A0261_N WHD_RecQ_mid_bact HTH_3 GntR Xre-like-HTH RepA_N HVO_A0114 AllG
Other DBs
NCBI-ProteinID: ABQ70457
UniProt: A0A9J9LE79
Position
4519295..4519912
AA seq 205 aa
MAQSAWIKRYPNDTEVHPAGTPVRELWMVMEGALELRRDAYTGARSVLSFSQPGEILGFN
SQFSDAVPTYNVMTYGFTKLLHIPGSTMRDVLREQPELVWTVASYYFTRLQLRTDYIALH
ATAPLKERIILQLLQMARQTANMTDEIHLRLSQESLAFLLGTSRQSINRELKTLKDLGLI
DYKGGKIHVPSLSTLMSLHDLSMKN
NT seq 618 nt   +upstreamnt  +downstreamnt
ttggcgcaatccgcatggatcaagcgctatcccaacgatacggaggttcatcctgccggt
acccccgttcgcgagctatggatggtgatggagggggcgctggagttgcgcagggacgcc
tataccggcgcccgttcggtgctgtccttctcgcagcctggcgagattctgggcttcaac
tcccaattctcggatgccgtcccgacatataatgtgatgacctacggcttcaccaagctc
ctgcatattccgggctcgaccatgcgggacgtgttgcgcgaacagccggaactcgtctgg
acggtggccagctattactttacgcggctccagctgcgaaccgattatatcgccttgcat
gccacggcgccgctgaaggagcggatcatcctgcaactcctgcagatggcgcgccagacc
gccaatatgacggatgagatccatctgcggctttcgcaggagagcctcgcctttctgctg
ggcacatcgcgccagagcatcaatcgcgagctcaagaccctgaaggatctcggcctgatc
gactacaagggcggtaagatccacgttcccagcctgtcgacgttaatgtcgctgcacgat
ctatcgatgaagaattga

  All links  
Gene (3)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (18)   

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