Thalassospira sp. A40-3: IT893_08125 Help Entry IT893_08125       CDS       T08364                                  Symbol recQ Name (GenBank) DNA helicase RecQ   KO K03654   ATP-dependent DNA helicase RecQ [EC:5.6.2.4] Organism thai  Thalassospira sp. A40-3 Pathway thai03018   RNA degradation Brite KEGG Orthology (KO) [BR:thai00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     IT893_08125 (recQ)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:thai03019]     IT893_08125 (recQ)    03400 DNA repair and recombination proteins [BR:thai03400]     IT893_08125 (recQ) Enzymes [BR:thai01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      IT893_08125 (recQ) Messenger RNA biogenesis [BR:thai03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      IT893_08125 (recQ) DNA repair and recombination proteins [BR:thai03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       IT893_08125 (recQ) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RQC DEAD HRDC RecQ_Zn_bind Helicase_C ResIII Motif Other DBs NCBI-ProteinID:  QPO13456 Position complement(1813487..1815319) Genome browser AA seq 610 aa AA seqDB search MPDLLDRPVQRQPIDVLQEVFGYDSFRGQQAEIIDHVIAGNDALVLMPTGGGKSLCYQVP ALCRPGTAVVVSPLIALMKDQVDALNQLGVKAAFINSTLAPDAAREIETRAVDGDIDLLY VAPERFASDRFLNLLDRISISLFAIDEAHCVSQWGHDFRPEYRRLDLLPTRFAHVPRIAL TATADTPTRKDIAENLHLTDAQCFITGFDRPNITYRIETKGNAKQRLLSFLNREHAKDAG IVYCLSRRKTEDVAQWLSENGRPALPYHAGLAQETRQLHQDRFLREDGLIICATVAFGMG IDKPNVRFVAHLNLPKSMEAYYQETGRAGRDGLPANAWMNYDLSDIVSIRSMVAGSDAPE AQKRIESRKLDALVGLAETTRCRRQVILSYFGEDRHEPCGNCDTCLEPVDTWDATQASRK ALSAVYRTGQRFGPAHVIEVLMGRKTEKIRQNGHDKLSVYAIGKDIAQPQWRSVFRQLLA MGYLEVDVEGHGGVYLTEESRPVLRGEKVVEMRKDPGESKRAMTKRLRDFDTEFENEEDR DLWERLRTLRRELATSQNVPPYVIFSDRTLWEMVRFKPRTLEDMASINGVGVKKLDQYGL AFLDVMDGRR NT seq 1833 nt NT seq  +upstreamnt  +downstreamnt atgcccgaccttctcgaccgacctgtacaacgtcagccgattgacgttctgcaagaagtg ttcggctatgacagctttcgtggccaacaggctgaaatcattgatcatgtcatcgctgga aatgatgcactggtcctgatgccgaccggtggcggcaagtcgctttgctatcaggttcct gccctgtgccgtccgggaacggcagttgtcgtatccccgctgatcgcgcttatgaaggat caggtcgatgcgcttaatcagttgggcgtcaaggcggcctttatcaattcgacccttgcc cccgatgccgcgcgcgaaattgaaacgcgtgccgtcgatggtgatatcgatcttctctat gtggcgccggaacgttttgcctctgaccggttcttgaacctgctcgaccggatcagcatt tcactgtttgcgattgatgaagctcactgcgtatcgcaatggggccatgatttccgcccg gaatatcgccgccttgatttgctgccaacgcgctttgcccatgtgccgcgcattgcgctg acggcaacggcggatacgccgacccgcaaagacattgccgaaaacctgcatctgaccgat gcacagtgctttatcaccggttttgaccgaccgaacatcacctatcgcattgaaaccaag ggcaatgccaagcaacgcctgctgtcgttccttaatcgcgaacatgcaaaggatgccggg attgtctattgcctgtcacggcgcaaaaccgaagacgtcgcgcaatggctttcggaaaat ggtcgaccggccctgccgtatcacgcgggtctggcacaggaaacacgccaacttcatcag gaccgcttcctgcgtgaagacgggctgatcatctgtgcgactgtggcctttggcatgggg atcgacaaacccaatgtccgctttgtcgcccatctcaatctgcccaaaagcatggaagcc tattatcaggaaaccgggcgtgccggacgtgatggactgccggccaatgcgtggatgaat tacgatctgtccgatatcgtttcgatccgaagcatggtggccggttccgacgcacccgaa gcccagaaacgcattgaatcgcgtaaactcgatgcgctggtcgggcttgcggaaaccacc cgttgccgccgtcaggtgatcctgtcctattttggtgaagaccggcacgaaccatgcggc aactgcgacacctgccttgaaccggttgatacctgggatgcaacccaggcctcgcgcaag gcgctgtcggcggtgtatcgcaccggccaacgctttggcccggcacatgtgatcgaagtc ctgatgggccgcaagaccgaaaaaatccgccaaaacggccacgacaagctttcggtctat gccattggcaaggacatcgcccagccgcaatggcgctcggtcttccgacagctccttgcc atgggatatctcgaagtcgatgtcgaaggacatggcggcgtctatctgaccgaggagtcc cgaccggtgctgcgcggcgaaaaagtcgtcgaaatgcgcaaggacccgggcgaaagcaaa cgcgccatgaccaagcgcctgcgcgattttgatacagagttcgaaaacgaggaagaccgc gatctttgggaacgtttgcgcacgctccgccgcgaactggcaaccagccagaatgtgccg ccctatgtgatcttcagtgaccggacactttgggaaatggtgcgtttcaagccccgcacc cttgaagatatggcatccatcaacggtgtcggcgtcaaaaagcttgatcagtacggattg gcatttcttgatgtcatggacggacggcggtaa

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