KEGG   Trichomycterus rosablanca: 134301669
Entry
134301669         CDS       T09921                                 
Symbol
cacna1sa
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, a
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
trn  Trichomycterus rosablanca
Pathway
trn04010  MAPK signaling pathway
trn04020  Calcium signaling pathway
trn04260  Cardiac muscle contraction
trn04261  Adrenergic signaling in cardiomyocytes
trn04270  Vascular smooth muscle contraction
trn04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:trn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    134301669 (cacna1sa)
   04020 Calcium signaling pathway
    134301669 (cacna1sa)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    134301669 (cacna1sa)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    134301669 (cacna1sa)
   04261 Adrenergic signaling in cardiomyocytes
    134301669 (cacna1sa)
   04270 Vascular smooth muscle contraction
    134301669 (cacna1sa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:trn04040]
    134301669 (cacna1sa)
Ion channels [BR:trn04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   134301669 (cacna1sa)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel CAC1F_C
Other DBs
NCBI-GeneID: 134301669
NCBI-ProteinID: XP_062842556
Position
24:complement(19556490..19577528)
AA seq 1786 aa
MEAGGEAPMSSYIMDEETLKRKQREKLKKLQATGGNPRPARSLLFLTLRNPFRRACISIV
EWKPFEIIILLTIFVNCVALAVFMPMPEEDTNNTNSNLESLEYIFLIIFTLECFLKIVAY
GLLFHADAYLRNCWNILDFVIVTMGLFTIVVDLINNISGVEAPVEQKGGGFNMKALRAFR
VLRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCYH
QGTEIVAAVENEKPSPCAEAGNGRRCTLNGTVCKPGWPGPNNGITHFDNLGFSMLTVYQC
ITTQGWTDVLHWVNDAIGMEWPWLYFVTLILLGSFFILNMVLGVLCGEFTKEREKSSRSG
EYQKLRERQQLDEDLKGYMEWITQAEVMDNDQEGQGLLPLQDGGSYTESLYELDGLNRLM
YYVRHARRWNRFFRRKCRVWVKSRLFYWLVFLLVFFNTLIIATEHHQQSQSLTDFQESCN
KALLMLFAVEMLVKMYALGLPSYFMSLFNRFDCFVVTVGILELILVNTGFMSTMGISVMR
CIRLLRLIKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFP
DQRVRRSNFDNFPQALITVFQILTGEDWNSVMYDGIMAHGGPVMPGILVSIYFIVLFICG
NYILLNVFLAIAVDNLAEAESLTSAQKEKAEEKKRKKILRSKASDKGDDDKNLLAKKLAE
QRAKIDGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPTSPRPRPMADLQL
KETVVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPLS
FRNQVLAYADYVFTSVFTAEIILKMTTYGAFLHKGSFCRNSFNILDLIVVGVSLLSMGME
SSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIG
VQLFRGKFYACTDPLKMTEAECRGAFIYHQEGALHEMVIKQRKWINSDLNFDNVLNGMLA
LFTASTFEGWPKLLYKAIDSNMEDVGPVYNNRIGISIFFIVYLILIAFFMMNIFVGFVIV
TFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMFL
LIMLNTMCLGMQHCNQSEHITHLSDMLNVIFTVLFTVELILKVAAFKVKGYFGDPWNVFD
FVIVVGSIVDVILSEINVALAAQGGLYCLTGCEEVNPMQEIADSENMSVSITLFRLFRVM
RLVKLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALIDGTVIN
RNNNFQTFPQAVLLLFRCATGEGWQEVMLGCLYGQRCDPKSDYLPGEEFTCGSGFAVLYF
MSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLD
VVTLLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTGLRIKTEG
NFQQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQE
EYYGYRPTKNKTTNEIQAGLRSIEEEAAPELQRAISGDLMDMDEMDGGLDEGADHSIFRR
AGGLFGNHVDPFSLHGGAPAHTQVVSQRPLQISDGSMPESNGSPRATVYFQNNYSDYNVN
NNANNSGRMAFTSPLINRLHFPACISENVQEPVSAAEVLIREVLKAGGVASLAADRSFVS
MTRTELAAVLRVNVQQLEEQAADMLNAPVRGGVREQATPLSGHSQV
NT seq 5361 nt   +upstreamnt  +downstreamnt
atggaggccggaggcgaggcccccatgagctcgtacatcatggacgaggagacgctgaag
aggaagcagagggagaagctgaagaagctccaggctacaggagggaaccctcgacccgcc
cgctcgctcctcttcctcaccctcaggaaccccttccgcagggcctgcatcagcatcgtg
gagtggaaaccgtttgagatcatcattctgctcaccatctttgtgaactgtgtagctctg
gccgtgttcatgcccatgcccgaggaggataccaacaacaccaacagcaacctggagagt
ctggagtacatattcctcatcatattcacactggagtgtttcctgaagatcgtggcatat
ggactactgttccacgctgacgcatacctacgaaactgctggaacattctggacttcgtc
atcgtcaccatggggctgttcactatagtggtggatctgattaataacatcagcggtgtg
gaggctccggtggaacagaagggtggaggattcaacatgaaagcactgcgagccttcagg
gtgttgaggccactacgtctcgtctccggggtcccaagcctgcaggtggtgatgagttcg
attctcaagtccatgctgccactgttccacatctcactgctggtcttcttcatggtcacc
atctacgccatcatcggcctggagctcttcaaatgcaagatgcacaaaacctgctaccac
cagggcacagaaatcgtagcagcggtggagaacgagaagccgtcgccgtgtgccgaggcg
ggtaacgggcgccgctgtaccctgaacggtaccgtctgtaagccggggtggcccgggccc
aacaacggcatcacacacttcgataacctgggcttctccatgctcaccgtgtaccagtgc
atcaccactcagggctggaccgacgtcctccactgggtgaacgatgctatcgggatggag
tggccgtggttgtacttcgtgactctgattcttctcggctccttcttcatactgaacatg
gtgctgggggtcctgtgtggtgaattcactaaggagcgagagaagagctctcggagcggt
gagtatcagaagctgcgagaacgtcagcagctggatgaagatctgaagggttacatggaa
tggatcactcaggcagaggtcatggacaacgatcaggagggacaaggtttgctgcccctg
caggatggaggttcctacacggagagcctgtacgagctggacggactgaacagactcatg
tactacgtgcgccacgcccgtcgctggaacaggttcttcaggaggaagtgccgggtgtgg
gtgaagtccagactcttctactggctcgtcttcctgctggtgttcttcaacacgctgatc
atcgctactgagcatcaccagcagtctcagtccctcaccgactttcaggagagctgtaat
aaagctctgctgatgctcttcgcggtggagatgctggtgaagatgtacgctctgggtctc
ccctcatacttcatgtccctgtttaaccggttcgactgtttcgtggtgacggtgggaatc
ctggagctcatcctggtcaacacgggcttcatgtccaccatgggcatctccgtcatgcgc
tgcatccgcctgctgcgcctcatcaaagtcaccaagtactggacgtccctgagtaacctg
gtggcatctctgttgaattcggtgcgctccatcgcctcgctcctgctcctcctcttcctc
ttcattgtgatcttctctctgctggggatgcaggtgttcggggggaagtttaacttccct
gatcagagggtcagacgcagcaacttcgataatttccctcaggcgctcatcaccgtcttc
cagattttaacaggtgaggactggaacagtgtgatgtacgatggaatcatggcacacgga
ggtccagtcatgcccggaatcctggtcagcatctacttcatcgtcctcttcatctgtgga
aactatatcctgctgaatgttttcttggcgattgcggttgataatctggctgaagcggag
agtctcacctcggctcagaaggagaaagctgaggagaagaaacggaagaagatcctcaga
tctaaagcctctgataaaggagacgacgataaaaacctgctggcaaagaaactggcagaa
caaagagccaagattgatggaattccaaccaccgctaagctgaaggtggacgagtttgaa
tcgaatgtgaacgagattaaggatccgtttcctcccgctgactttccaggtgacgatgag
gaggaggagcctgagattcccaccagcccgaggccacgccccatggctgacctgcagctg
aaggagacggtggtgcctatgcccgaggctagctccttcttcatcttcggccctcagaac
aagttccgtaagctgtgccatcgcatcatcaacgccacaacgttcaccaacatcatcctg
ctcttcatcctgctgagcagcatctccctcgccgctgaggaccccatcgaccccctgtcc
ttcaggaaccaggtcctggcatacgctgactacgtcttcacctcggtcttcactgctgag
atcatactgaagatgacgacctacggtgcttttctacacaaaggctccttctgcaggaac
tccttcaacatcctggatctgatagtggtaggagtgtcactgctgtctatggggatggaa
tccagtgctatctctgtagtgaagattctgcgagtgctgagagttctgagacctttacga
gccataaacagagccaaaggactcaaacatgtggttcagtgtgtgtttgtggccattaag
acgatcgggaacatcgtgctggtcaccatgctgctggatttcatgttcgcctgcattggg
gtgcagctctttaggggtaaattttacgcctgtactgatcctctgaaaatgactgaagct
gagtgcaggggggcgtttatttatcaccaggagggagctctacacgagatggtgatcaaa
cagaggaagtggatcaacagtgatctgaacttcgataacgtactgaacggcatgctggct
ctcttcaccgcctccaccttcgagggctggcccaagctgttgtataaagccatcgattcc
aacatggaggacgtgggtcctgtttacaacaaccgtatcggaatctccatcttcttcatt
gtctacctcatcctcatcgccttcttcatgatgaacatcttcgtcggcttcgtcatcgtc
accttccaggagcagggcgagcaggagtacaagaactgtgagctcgacaaaaaccagcgt
cagtgtgtgcagtacgctctgaaggcccgccccctgagatgctacattcccaaaaacccc
tatcagtaccaggtgtggtacatcgtcacctcctgttactttgagtacctgatgttcctg
ctgatcatgctcaacaccatgtgcctcggcatgcagcactgtaatcagtcggaacacatc
actcacctctccgacatgctgaacgtgatcttcaccgtactcttcaccgtcgagctcatc
ctcaaagtcgctgcctttaaagtcaagggatatttcggggacccgtggaacgtgtttgat
tttgtgattgtggtcggcagcatcgtcgacgtcattctgagtgaaattaatgtggctctg
gctgcgcagggtgggctatactgtctcacgggatgtgaggaggtgaaccccatgcaggag
atcgcggactcggagaacatgagcgtctccatcacgctgttccgtctgttccgtgtgatg
cggttggtgaagcttctgaacagatttgaggggattcggaacctgctgtggaccttcatc
aaatccttccaggcgttaccatacgtggctctgctcatcgtcatgctcttcttcatctac
gctgtgattggaatgcaggtattcgggaagatcgctctgatcgatggaacggtgattaat
cggaacaataatttccagacgtttcctcaggctgttctgctgctcttcaggtgtgctaca
ggtgagggctggcaggaggtgatgttggggtgtttgtacgggcagcgatgtgaccctaaa
tctgattacctgccaggggaggagttcacctgtggctcagggttcgctgttctctacttc
atgagcttctacatgctgtgtgctttcctgatcattaatctgtttgtggccgtcatcatg
gataatttcgactatctgacgcgtgattggtcgattctggggccgcatcacctggacgag
tttaagaagatctgggcggagtacgaccctgaagcaacggggcgcatcaaacacctggat
gttgttactctgctgaggagaattcagcctccactggggttcggcaagttctgcccccac
cgagtggcctgcaagaggctgatctccatgaacatgccgttgaacagtgatggtacggtc
acctttaatgccaccctctttgctttggtccgcaccggcctccgcatcaaaaccgaggga
aatttccagcaggccaatgaagagctgagagccattatcaagaaaatctggaagagaacc
agcatgaagcttctcgaccaggtcataccacccatcggagatgacgaggtgacagtaggg
aagttctacgccacctttttgatccaggaacacttccggaagttcatgaagcgtcaggag
gaatattacgggtaccgacccaccaaaaacaaaaccaccaacgagatccaggccgggttg
aggagcatcgaggaggaggcggctccggagctgcagagagctatctcaggagacctgatg
gacatggacgagatggacggaggtctggacgagggggccgaccattccattttcaggcgc
gcggggggtctgttcgggaaccatgtggatccgttctccctccacggtggagctccagcg
cacactcaggttgtaagtcagcgccccctgcagatcagcgacgggagcatgccggagagc
aacggttcacccagagctacggtctacttccagaacaactacagcgactacaacgtcaac
aacaacgccaacaacagcggcaggatggcttttacctcaccgttaataaacagactccat
ttcccagcatgcatcagtgagaacgtgcaggagccggttagcgcggctgaggtgctcatc
cgagaggtgttgaaggcggggggcgtggccagcctggccgccgatcgtagcttcgttagc
atgacgaggacagaactggctgcagtgctgcgcgtgaacgtccagcagctggaagaacaa
gcagcagacatgttgaatgcacctgtgaggggcggagtcagagagcaagccacgcccctt
tctggacacagccaggtgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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