KEGG   Thalassomonas viridans: SG34_020660
Entry
SG34_020660       CDS       T08831                                 
Symbol
betA
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
tvd  Thalassomonas viridans
Pathway
tvd00260  Glycine, serine and threonine metabolism
tvd00670  One carbon pool by folate
tvd01100  Metabolic pathways
Module
tvd_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SG34_020660 (betA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    SG34_020660 (betA)
Enzymes [BR:tvd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     SG34_020660 (betA)
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 NAD_binding_8 Lycopene_cycl Pyr_redox_2 DAO FAD_oxidored TrkA_N Thi4 ApbA HI0933_like
Other DBs
NCBI-ProteinID: WDE03771
UniProt: A0AAE9YZ05
Position
complement(4683317..4685017)
AA seq 566 aa
MNISKQEAFDYIIVGAGSAGCVLANRLSEDSNNKVLLVETGGSDKSIFIQMPTALSIPMN
TKKYAWQFETQPEPYLNNRRMHCPRGKVLGGSSSINGMVYVRGHARDFDEWQQEGAAGWD
YQHCLPYFKKAESWAFGGDDYRGESGPLGVNNGNEMANPLYKAFIKAGVDAGYMETGDYN
GARQEGFGPMHMTIKEGVRHSTANAYLRPAMSRENLTVVTHALVHKVLLAGKKAVGIRYE
RKGQLVEVKANKEVVLSAGPVGSPHILQLSGIGAKAVLEKAGIETLHELPGVGENLQDHL
EFYFQFKCKQPISLNGELDWWSKLKIGVRWILTKQGLGSTNHFESCGFIRSKAGVEWPDL
QYHFLPAAMRYDGKEAFAGHGFQVHIGHNKPKSRGAVKAVSADPKAHPEILFNYLQHEDD
REGFRDCVKLTREIINQPALDEFRGEEIQPGMDVQTDEQIDDFVRNFVESAYHPSCSCKM
GTDELAVVDPETKVHGIDGLRVVDSSIFPTIPNGNLNAPTIMVAERAADMILQREPLPPA
NAEVVMDDNWQQQQRQGKAAREIKPQ
NT seq 1701 nt   +upstreamnt  +downstreamnt
gtgaatatcagtaaacaagaagctttcgattacattattgtcggcgccggctctgccggt
tgcgtactggccaaccgcctgagcgaagacagcaacaacaaagtcttgctggtggaaacc
ggcggcagcgacaagagcatttttatccagatgcccaccgccttgtccattcccatgaat
accaaaaagtacgcctggcagtttgaaacccagccggagccttatcttaacaaccggcgc
atgcattgcccccggggaaaagtgctggggggctcttcttccatcaacggcatggtgtat
gtgcgcggtcatgcccgggatttcgacgagtggcagcaagaaggcgccgccggctgggat
taccaacattgcctgccttatttcaaaaaagcggaaagctgggctttcggcggcgatgac
taccgcggcgaaagcgggcctttaggggtaaacaacggcaatgagatggccaaccccctg
tataaagcctttattaaagccggtgttgatgccggttatatggaaaccggcgattataac
ggcgcccgccaggaaggctttggccctatgcatatgaccatcaaagagggcgtgcgccat
tctaccgccaatgcctacctgcgtccggcaatgtcccgggaaaacttaaccgtagtgacc
catgccttggtacataaggtgctgttggcagggaaaaaagccgtcggcatccgctatgag
cgtaaaggtcagcttgttgaggttaaggccaacaaggaagtggtattatccgccggtcct
gtcggctctccccatattttgcagctttccggcatcggtgcgaaagccgtactggagaag
gcggggattgaaaccttacatgagctgcccggcgtcggtgagaacctgcaggatcatttg
gaattttatttccagtttaaatgcaagcagccgatttcactcaacggcgaacttgactgg
tggagcaaactgaaaattggcgtgcgctggatcttaaccaagcaaggcctgggttccacc
aaccattttgagtcctgtggttttatccgctccaaagccggggttgaatggccggacctg
caatatcatttcctgccggccgcgatgcgttatgacggcaaggaagcctttgccggtcac
ggtttccaggtgcatatcggccataacaagcctaaaagccgcggcgcggtcaaggctgtc
tctgccgatcctaaagcgcatcccgagattttgtttaactacctgcaacatgaagatgac
cgtgaaggtttccgcgattgtgtgaaactgactcgggagatcatcaaccagccggcactg
gatgaatttcgcggtgaagaaatccagcccggcatggacgtacaaaccgacgaacagata
gatgattttgtccgtaattttgtcgaaagcgcatatcacccctcctgttcctgcaaaatg
ggcacggatgagctggcggtggtagacccggaaactaaggtgcacggcattgatggactt
agggtggtggactcgtcgattttccccactatccccaacggcaacttaaatgcccccacc
attatggtggccgagcgcgccgccgatatgattttacagcgtgagccgctgccgccggcc
aatgccgaagtggtgatggacgacaactggcagcaacagcaaagacagggcaaagcggcc
agggaaatcaagccgcagtaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (14)   

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