KEGG   Thalassomonas viridans: SG34_028520
Entry
SG34_028520       CDS       T08831                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
tvd  Thalassomonas viridans
Pathway
tvd02020  Two-component system
tvd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SG34_028520
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SG34_028520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvd03021]
    SG34_028520
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:tvd02035]
    SG34_028520
Transcription machinery [BR:tvd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SG34_028520
Bacterial motility proteins [BR:tvd02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    SG34_028520
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r4_2 Seryl_tRNA_N T3SS_ATPase_C FIN1
Other DBs
NCBI-ProteinID: WDE08441
UniProt: A0AAE9Z7Z4
Position
6463760..6464437
AA seq 225 aa
MTLPCQEEEQLLIKYLYLVKRAVSHLRSQVSTLQSYEDLIQIGTMGLLEAIRRYGSEPDD
VFEGYAFKRIRGAILDELRRQDWRPRQARQQAHKLNRARRNLLKELGREPSEEELAAHLE
VDLKQVQAMEFDNVAEEMHSLDELLQVDSNVLSYDSSTDNSEMKQALAQTLALLDKREQL
LLTLYYQYELNMKEIALTLKITESRVCQLHKLAIKHLHTLLAQQL
NT seq 678 nt   +upstreamnt  +downstreamnt
ctgacgctaccctgtcaggaagaagagcagctgctgatcaaatacctgtatctggtaaaa
agggccgtcagccatttgcgcagccaggtcagtactttgcagtcatacgaagatctgatc
cagataggcaccatgggcctgctcgaagccatccgccgctacggcagtgagcccgacgat
gtcttcgaaggttatgcctttaaacgtatccgcggcgcaattttggatgaactacgccgc
caggactggcgaccgcgccaggccaggcaacaggcccacaagctgaaccgggcccgccgc
aacctgttaaaagagctgggacgcgagccaagcgaagaagagctggcggcgcaccttgaa
gtagacctgaaacaggtacaggcaatggagttcgacaatgttgccgaagagatgcacagc
ctggacgagctgctgcaggtggacagcaatgttttgtcctacgactccagcaccgacaac
agcgaaatgaaacaggcgctggcgcaaaccctggcgctgctggataaaagagaacagctg
ttacttaccctgtattaccaatatgaactgaacatgaaagaaatcgccctgaccctgaaa
atcaccgaatcccgggtttgccagctgcacaaactggcaattaaacatcttcacactctg
ctggcacagcagctctaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (9)   

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