KEGG   Trichosurus vulpecula (common brushtail): 118828116
Entry
118828116         CDS       T10126                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04510  Focal adhesion
tvp04520  Adherens junction
tvp04530  Tight junction
tvp04670  Leukocyte transendothelial migration
tvp04810  Regulation of actin cytoskeleton
tvp05146  Amoebiasis
tvp05203  Viral carcinogenesis
tvp05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118828116 (ACTN1)
   04520 Adherens junction
    118828116 (ACTN1)
   04530 Tight junction
    118828116 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118828116 (ACTN1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    118828116 (ACTN1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    118828116 (ACTN1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    118828116 (ACTN1)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    118828116 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tvp04131]
    118828116 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tvp04812]
    118828116 (ACTN1)
   04147 Exosome [BR:tvp04147]
    118828116 (ACTN1)
Membrane trafficking [BR:tvp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    118828116 (ACTN1)
Cytoskeleton proteins [BR:tvp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     118828116 (ACTN1)
Exosome [BR:tvp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118828116 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   118828116 (ACTN1)
  Exosomal proteins of bladder cancer cells
   118828116 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 XisI Uds1 U3_assoc_6 FAZ1_C
Other DBs
NCBI-GeneID: 118828116
NCBI-ProteinID: XP_036590421
Position
8:complement(227627033..227761837)
AA seq 914 aa
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTVPWLENR
TPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWQLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLQQK
DYEIATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYNSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVTKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALMEEHTRQQQNERLRKQFAAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRIGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITLDELRRELPPDQAEYCIARMAPYTGPDAVPGALD
YMSFSTALYGESDL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggatcattatgattcccaacaaaccaatgactacatgcagccggaagaggactgggac
agagacttgctccttgaccccgcctgggagaagcagcaaagaaagacattcacagcatgg
tgcaattcacacctccgaaaggcaggcacgcagattgagaacatagaggaggatttccgg
gatggcctgaagctcatgttgctcctggaggtgatttcaggtgaacgtttggccaagcca
gagcgaggcaagatgagggtacacaaaatctccaacgtgaataaggccctggacttcatt
gctagcaaaggggtcaaactggtctccattggagcagaagaaattgtggatgggaatgtg
aaaatgactctagggatgatttggactatcatccttcgctttgctattcaggatatctca
gtggaagagacatcagcaaaggaagggctgctgctgtggtgtcagaggaagacagcccca
tataaaaatgtaaacattcagaacttccacatcagctggaaagatggccttggattctgc
gcactgatccacagacaccggccagagctcattgattatgggaagctgcggaaggatgac
ccactcaccaacctaaatacagcttttgatgtggcagagaagtacctggatatcccaaag
atgctggatgcagaagacattgttggaactgcccgccctgatgaaaaggccatcatgacc
tatgtttctagtttctaccacgccttctcaggagcccaaaaggcggagacagcagctaat
cggatctgcaaggtgctggcagtcaaccaggagaatgaacagctgatggaagactatgag
aagttggccagtgatctattggagtggatccgtcgcactgtcccatggttggagaaccgg
actcctgagaacaccatgcaggccatgcagcagaaactggaggatttccgagactaccgc
cgcctgcacaagccccctaaggtccaggaaaagtgccagctggagatcaactttaacaca
ttgcagaccaaactccgactcagcaacaggcccgctttcatgccctccgaggggaagatg
gtctcggatatcaataatgcatggggtggcctggagcaggcagagaagggttatgaggag
tggcagttgaatgagatccggaggttagagcgactggaccacctggctgagaagttccgg
cagaaggcctctatccatgaagcctggacagatggcaaggaggccatgctgcagcagaag
gactatgagatagccaccctttctgagatcaaggccctgctgaagaagcacgaggccttt
gagagtgaccttgctgctcaccaggaccgagtggaacagattgctgctattgcacaggag
ctgaatgaattggattattacaattctcccagtgtcaatgctcgttgccaaaagatctgt
gaccagtgggacaacctgggagcattgacccaaaagagaagggaagctttggagcggaca
gagaagctgctagagacaatagaccaactgtatctggaatatgccaagagagctgctcct
tttaataactggatggaaggggccatggaagatctgcaggataccttcattgtgcatacc
atagaggagattcagggattgaccacagcacatgaacaattcaaagccaccctccctgat
gctgacaaggagcgacaggccattctaggaatccataatgaagttaccaaaattgtccaa
acataccatgtcaatatggctgggaccaatccctacacaaccatcacccctcaggagatc
aatggcaaatgggatcatgttcggcaactagtaccacggagggaccaggccttgatggag
gaacacacccgtcagcagcagaatgaacgactccgcaaacagtttgcagctcaggccaat
gttattggaccctggatccagaccaagatggaggagattggccgcatctccattgagatg
catggcaccttggaggaccagcttaatcaccttcgacagtatgagaagagcattgtcaat
tacaaaccaaagattgaccagctggaaggagaccaccagcagatccaggaggctcttatt
tttgacaacaagcacaccaactataccatggagcatatccgagtgggatgggaacagctc
ctcaccaccattgccaggaccatcaatgaagtggagaaccagatccttacccgagatgcc
aaagggatcagccaggaacagatgaatgagttccgtgcctccttcaaccactttgaccgg
gatcactccggcacactcggtcctgaggagttcaaagcctgcctcatcagcttgggttac
gatattggcaacgacccccagaagaagacaggcatgatggacacggacgatttccgagcc
tgccttatctccatgggttacaatatgggagaggcagagtttgcccgaatcatgagcatt
gtagaccctaatcgcattggcgtagtgacattccaggccttcatcgatttcatgtcccgt
gagacagctgacacagacacagctgaccaagtcatggcttccttcaagatcctggctggg
gacaagaattatattaccttggatgaactacgccgggaactcccacctgaccaagcagaa
tactgcattgcacggatggccccctacactggcccagatgcggtgcctggtgctctggac
tacatgtccttctccacagccctctatggcgaaagtgacctttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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