KEGG   Usitatibacter palustris: DSM104440_00179
Entry
DSM104440_00179   CDS       T06995                                 
Symbol
vfr
Name
(GenBank) Cyclic AMP receptor-like protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
upl  Usitatibacter palustris
Pathway
upl02020  Two-component system
upl02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:upl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DSM104440_00179 (vfr)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DSM104440_00179 (vfr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:upl03000]
    DSM104440_00179 (vfr)
Transcription factors [BR:upl03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    DSM104440_00179 (vfr)
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HTH_24 MarR_2 DUF7343 HTH_31 HVO_A0261_N HTH_46 HTH_3 Sigma70_r4 Rrf2 TrmB FlhF_2nd CNBH_CNNM2_C HTH_23 MarR HTH_36
Other DBs
NCBI-ProteinID: QJR13396
UniProt: A0A6M4H1L7
Position
195618..196268
AA seq 216 aa
MKDEPAKDDANVLSADDVARLSKLAYARQFPARAVIVTEGEETDALYVILEGRAKAYVSD
AAGKEAVLSIMGPGEYFGELSIDERPRSASVMTLEPARLLVIPNEKFRAFLAEDPEFTLH
FIRKLMHRIRELTKLVGSLTLLDAYGRVARLLLESAVEENGVQVVPGRLTQADVASRVGC
SREMVSRIFKELTRGGYIVVDGEHRITIVKRPPDKW
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaaagacgaacccgccaaggacgatgccaacgtcctcagcgccgacgacgtagcccgg
ctctcgaagcttgcctatgcgcgccagtttcccgcgcgcgccgtgatcgtgaccgaaggc
gaggagaccgatgcgctctacgtgatcctcgagggccgcgccaaggcctacgtgagcgac
gcggccggcaaggaagcggtgctctcgatcatggggccgggcgaatacttcggcgagctc
tcgatcgacgagcgcccgcggtcggcttccgtgatgacgctcgagcccgcgcgcctgctc
gtgattcccaacgagaagttccgcgcgttcctcgcggaggatcccgagttcacgctgcac
ttcattcgcaagctcatgcaccgcatccgcgagctcaccaagctcgtgggcagcctcacg
ctgctcgatgcctacgggcgggtcgcgcgcctgctgctggaatccgcggtggaagagaat
ggggtgcaggtcgtgcccgggcgactcacgcaggccgatgtcgcgagccgcgtcggttgc
tcgcgcgagatggtgagccggatcttcaaggagctcacgcgcgggggctacatcgtcgtg
gatggcgaacaccgcatcacgatcgtgaagcggcctcccgacaagtggtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (20)   

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