KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447294
Entry
135447294         CDS       T09958                                 
Symbol
NEIL3
Name
(RefSeq) endonuclease 8-like 3
  KO
K10569  endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135447294 (NEIL3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zle03400]
    135447294 (NEIL3)
Enzymes [BR:zle01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     135447294 (NEIL3)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     135447294 (NEIL3)
SSDB
Motif
Pfam: Zn_ribbon_GRF H2TH Fapy_DNA_glyco Zn_ribbon_RanBP T2SS-T3SS_pil_N
Other DBs
NCBI-GeneID: 135447294
NCBI-ProteinID: XP_064568304
Position
4:complement(16412975..16433765)
AA seq 576 aa
MVEGPGCALCAERLRARLRRGQRVRAARGGGGATAASQENISGHDFLVGHVYRGVETLGK
ELFMYFDQKALRIHFGMNGSMHINPDGSKERNGAQPVLEIQLMEDTVCFWDVTVEYRNAA
ECEQKVRMMESLDVCSPKFSFSRAEREIKQQNTRMLCDVLLDQSVLPGVGNIIKNEALFD
SGLHPALEVCQLTDEHIRHLVKMTRDFTLLFYKCRRAGSPLYPHYRVYRRAACRECRGSI
TVCRLGEHGRMTYFCSRCQKADPQLLNLSKLPARSSLIGWAYGRGSCSNEHVARKSEEEW
TCMCCTLINKPSAEICDACLTPRPEVPKMESFEDSAAFNADLMKYPCNDFRKPSTEIKIN
RKTAFGTTTLVLTDLGNNTVLRNDIQVSGGHSQCVFPKSNCKQIQSNACQSEGSTDKDCS
PNVAALASSSCQQPVSFKHVQKKQKTDHVPLVHPYNTAISAPQTNVTDATRMLSVGHPRC
SKHNRLCSLRVVRKDGENKGRQFYCCPLSRETRCEYFQWADLDFPFCNHGKRCVMKTVLK
IGPNNGKNFFVCRLAKEKQCGFFQWAKNGPGMQILP
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggtggagggcccgggctgcgcgctctgcgccgagcgcctgcgggcgcgcctgcgccgg
ggacagcgcgtgcgggccgcgcggggcggcggcggcgcgactgctgcaagtcaagagaac
atctctggtcatgatttccttgttggacatgtttacaggggtgtggagacattgggaaaa
gaactttttatgtattttgatcagaaagctttgaggattcactttggaatgaatggttcc
atgcacattaatcctgatggaagcaaagaaagaaatggagcacaaccagttttggagata
cagcttatggaggatactgtttgtttttgggatgtgacagtagagtatagaaatgcagct
gagtgtgagcagaaagtgaggatgatggaaagtttggatgtctgttctccaaagtttagc
ttctcaagagcagagcgtgagattaagcagcagaacacccgtatgttgtgtgatgtgtta
ttggatcaatcagtactacctggagtgggaaatatcataaagaatgaagcactgtttgat
agtggtcttcatccagctcttgaggtttgccaactgacagatgagcatatacgtcacttg
gtgaaaatgacacgtgattttaccctgcttttttataagtgccgcagagcggggtccccg
ctgtacccacactacagggtgtacaggcgcgcagcctgccgggagtgcaggggcagcatc
accgtgtgccgcctgggagagcacggcaggatgacttacttctgctcccggtgccaaaag
gcagatccccagctcctcaatctcagcaaactgccagctagaagcagcctaattggctgg
gcatatggcagggggtcatgttctaatgaacatgtagctcgcaaatctgaagaggagtgg
acgtgtatgtgctgcaccctaataaacaagccttctgctgaaatttgtgatgcctgtttg
actccaagacctgaagttccaaagatggagagttttgaagattctgcagcctttaacgca
gacttaatgaagtacccctgtaatgatttcagaaaaccaagcacagaaataaagatcaat
aggaaaactgcatttggaactacaactcttgtattaacagatcttggtaacaacactgtt
ttgagaaatgatatccaggtatctggtggacattctcagtgtgtttttccaaaaagcaat
tgtaaacagatccaaagcaatgcctgccagtcagagggaagcacagacaaggactgctca
ccaaacgtagctgccctggcttcgtcctcctgtcagcaacctgtctctttcaaacacgta
cagaagaaacagaaaactgaccatgtacctttggttcacccatataatacagcaatcagc
gcacctcaaactaatgtgacagatgctactcgcatgttgagcgtggggcatcctcgctgc
agtaaacacaaccgtctctgcagcctcagagttgtgagaaaggatggagaaaacaaggga
aggcagttttactgctgccctctctccagggaaactcggtgtgaatacttccaatgggct
gacttggattttccattttgtaaccatggcaagcgatgtgttatgaagactgtgttgaag
atcggtcccaataatggaaagaacttttttgtgtgccgtcttgcaaaggaaaaacagtgt
ggcttcttccaatgggcaaaaaatgggccgggtatgcagattcttccatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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