+D GENES KO #

  KEGG Orthology (KO) - Alkaliphilus oremlandii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:aoe00010] D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clos_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clos_0719 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clos_0971 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clos_0604 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0716 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0969 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0970 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clos_0972 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clos_0973 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clos_0586 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clos_1258 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0237 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_1953 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_2410 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_1571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2124 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2409 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_1570 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2125 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_0884 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:aoe00020] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2410 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_1571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2124 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2409 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_1570 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2125 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2408 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clos_1569 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clos_2411 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clos_1572 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clos_0624 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Clos_0623 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Clos_0435 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Clos_0884 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Clos_0237 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_1953 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:aoe00030] D Clos_1436 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clos_2266 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clos_2267 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clos_2596 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Clos_2573 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clos_1361 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Clos_1592 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clos_2645 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clos_0719 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clos_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions D Clos_1436 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:aoe00051] D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clos_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clos_0719 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clos_0971 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clos_2573 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aoe00520] D Clos_2373 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Clos_2224 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Clos_2836 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clos_2382 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Clos_2646 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clos_2555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_2779 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_1380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_0573 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clos_2569 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clos_2515 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Clos_2509 glycosyltransferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Clos_2510 N-acylneuraminate-9-phosphate synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Clos_0056 transcriptional regulator, AraC family K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] C 00620 Pyruvate metabolism [PATH:aoe00620] D Clos_0237 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_1953 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_2410 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_1571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2124 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2409 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_1570 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2125 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2387 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Clos_0801 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Clos_1447 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clos_1360 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Clos_0586 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clos_0397 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clos_0394 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clos_0395 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clos_0396 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_0435 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Clos_0086 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Clos_0167 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Clos_2506 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Clos_2737 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Clos_2355 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Clos_1712 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clos_1574 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Clos_0443 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clos_0884 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Clos_1258 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aoe00630] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_1346 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Clos_0090 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Clos_0439 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Clos_0437 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Clos_0436 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Clos_2432 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clos_2098 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clos_1700 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clos_0067 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Clos_0068 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Clos_0065 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0066 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Clos_0277 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:aoe00640] D Clos_0086 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Clos_0167 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Clos_1447 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clos_1360 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0636 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0091 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0847 Quinone oxidoreductase putative YhdH/YhfP K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Clos_0168 acyl-CoA dehydrogenase domain protein K20143 acrC; acrylyl-CoA reductase (NADH) [EC:1.3.1.95] D Clos_0397 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clos_0394 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clos_0395 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clos_0396 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clos_0439 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Clos_0437 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Clos_0436 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Clos_0623 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Clos_0624 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Clos_0326 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:aoe00650] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0088 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Clos_0165 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Clos_0636 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0091 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_2361 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clos_2360 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Clos_2413 Butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Clos_0072 Butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Clos_1828 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Clos_2414 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Clos_2387 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Clos_0801 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Clos_1346 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Clos_0090 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Clos_0443 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clos_0442 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clos_0441 sodium pump decarboxylase, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clos_0435 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Clos_0237 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_1953 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_2410 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_1571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2124 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2409 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_1570 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2125 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_0815 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Clos_0886 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:aoe00660] D Clos_0886 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clos_0623 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Clos_0624 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D Clos_0971 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:aoe00190] D Clos_0928 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Clos_0988 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Clos_0275 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Clos_0929 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Clos_0989 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Clos_0276 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Clos_0990 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Clos_0930 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Clos_2562 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Clos_2560 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Clos_2561 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Clos_2563 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Clos_2559 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Clos_2566 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clos_2564 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Clos_2565 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Clos_1959 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:aoe00710] D Clos_0970 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clos_0604 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0716 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0969 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0719 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clos_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clos_2266 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clos_2267 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clos_2573 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clos_0971 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clos_1436 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clos_2596 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Clos_0884 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Clos_1258 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:aoe00720] D Clos_0237 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_1953 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clos_1258 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clos_0624 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Clos_0623 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2410 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_1571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2124 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clos_2409 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_1570 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2125 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clos_2408 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clos_1569 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clos_2411 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clos_1572 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clos_0397 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clos_0394 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clos_0395 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clos_0396 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clos_0439 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Clos_0436 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Clos_0437 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Clos_2127 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clos_0249 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clos_0294 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Clos_0078 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clos_1360 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Clos_1447 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:aoe00680] D Clos_0277 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Clos_1700 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clos_0973 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clos_0719 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clos_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clos_1447 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Clos_0972 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clos_0343 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Clos_1567 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:aoe00910] D Clos_2363 Nitrite reductase (cytochrome; ammonia-forming) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D Clos_0309 Nitrogenase K02588 nifH; nitrogenase iron protein NifH D Clos_0670 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Clos_2435 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Clos_2338 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Clos_2459 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clos_2098 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clos_0064 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clos_2181 aspartate/glutamate/uridylate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:aoe00920] D Clos_0302 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D Clos_0303 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Clos_0304 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clos_1530 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Clos_0462 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C D Clos_0398 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Clos_0468 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clos_0333 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clos_0825 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clos_1073 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:aoe00061] D Clos_0397 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Clos_0394 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Clos_0395 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Clos_0396 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Clos_2110 acyl carrier protein K02078 acpP; acyl carrier protein D Clos_1456 acyl carrier protein K02078 acpP; acyl carrier protein D Clos_1454 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clos_1452 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clos_1457 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clos_2696 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_1455 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0257 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_2536 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clos_1453 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:aoe00071] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0636 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0091 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:aoe00561] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_1002 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clos_1451 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clos_1400 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clos_1563 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clos_1249 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Clos_1184 diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Clos_0260 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00564 Glycerophospholipid metabolism [PATH:aoe00564] D Clos_1401 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Clos_1137 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Clos_0199 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Clos_1400 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clos_1563 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clos_1249 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Clos_1184 diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Clos_0796 Ethanolamine utilisation EutA K04019 eutA; ethanolamine utilization protein EutA D Clos_0797 Ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D Clos_0798 Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D Clos_1518 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Clos_0720 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Clos_2332 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Clos_1541 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Clos_0238 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Clos_2153 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Clos_2039 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D Clos_2686 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:aoe00230] D Clos_1595 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clos_1592 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clos_2645 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clos_0538 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clos_0542 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Clos_0540 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clos_2223 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Clos_0539 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Clos_0536 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Clos_0537 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Clos_2697 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Clos_0541 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clos_1715 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clos_0920 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Clos_1590 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clos_1591 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clos_1391 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clos_2015 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Clos_1353 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Clos_0533 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clos_0558 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Clos_0877 molybdopterin dehydrogenase FAD-binding K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D Clos_0534 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clos_1423 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Clos_1144 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clos_2064 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clos_1277 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Clos_1714 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clos_2630 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Clos_0717 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Clos_1198 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Clos_0372 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Clos_0379 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Clos_0513 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Clos_0362 dihydroorotase, multifunctional complex type K01466 allB; allantoinase [EC:3.5.2.5] D Clos_2181 aspartate/glutamate/uridylate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:aoe00240] D Clos_2188 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clos_2194 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Clos_2191 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Clos_2192 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Clos_2190 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Clos_2193 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Clos_1515 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Clos_1767 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Clos_1564 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Clos_2009 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Clos_1655 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Clos_0920 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Clos_2375 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Clos_2572 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Clos_1418 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Clos_0651 PfkB domain protein K16328 psuK; pseudouridine kinase [EC:2.7.1.83] D Clos_0652 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D Clos_1589 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Clos_1251 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clos_2457 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Clos_1144 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clos_2064 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clos_2571 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clos_0060 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Clos_2589 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Clos_0472 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Clos_2455 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clos_0875 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:aoe00250] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0547 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clos_1816 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Clos_0232 Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clos_2188 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clos_0064 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clos_2459 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clos_2098 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clos_2008 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Clos_2836 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clos_0538 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:aoe00260] D Clos_0545 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clos_1162 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clos_2186 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clos_1955 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Clos_1954 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clos_2339 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Clos_1700 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clos_0972 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clos_0343 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Clos_1567 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Clos_0909 pyridoxal phosphate-dependent acyltransferase, putative K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Clos_0067 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Clos_0068 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Clos_0065 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0066 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Clos_0720 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Clos_0075 Methyltransferase type 11 K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156] D Clos_1741 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clos_1742 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clos_0846 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Clos_0664 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] C 00270 Cysteine and methionine metabolism [PATH:aoe00270] D Clos_0468 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clos_0333 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clos_0825 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clos_1073 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clos_1074 Cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clos_0080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clos_2531 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clos_0382 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clos_0384 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clos_1412 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Clos_1391 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clos_0374 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Clos_1897 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1855 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2029 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1076 Methyltransferase type 12 K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-] D Clos_1075 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Clos_0545 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clos_1162 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clos_2186 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clos_2492 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_0407 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_0252 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0398 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Clos_1741 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Clos_1742 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:aoe00280] D Clos_2492 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_0407 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0636 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0091 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0439 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Clos_0437 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Clos_0436 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_0815 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aoe00290] D Clos_0846 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Clos_0886 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clos_2492 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_0407 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:aoe00300] D Clos_2186 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clos_0545 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clos_1162 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clos_1163 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clos_1164 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Clos_1420 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clos_2023 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clos_0025 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Clos_1374 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_2017 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_0298 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_1375 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:aoe00310] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2419 aminotransferase class-III K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D Clos_0418 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D Clos_0421 D-Lysine 56-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] D Clos_0422 cobalamin B12-binding domain protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] D Clos_0417 Alcohol dehydrogenase zinc-binding domain protein K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11] D Clos_2597 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D Clos_2443 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D Clos_2598 conserved hypothetical protein K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] D Clos_2361 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clos_2360 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Clos_1699 dihydrodipicolinate reductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:aoe00220] D Clos_0227 arginase K01476 rocF; arginase [EC:3.5.3.1] D Clos_2008 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Clos_2098 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clos_2181 aspartate/glutamate/uridylate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Clos_2459 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:aoe00330] D Clos_2457 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Clos_0059 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Clos_0841 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Clos_0383 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Clos_1585 putative agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Clos_0384 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clos_0382 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clos_2419 aminotransferase class-III K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_2796 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Clos_0120 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Clos_0227 arginase K01476 rocF; arginase [EC:3.5.3.1] D Clos_0129 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Clos_0128 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clos_0127 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0033 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D Clos_1699 dihydrodipicolinate reductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] D Clos_0028 Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1] D Clos_0030 D-proline reductase (dithiol) K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1] C 00340 Histidine metabolism [PATH:aoe00340] D Clos_0073 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clos_0339 histidinol phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Clos_1187 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Clos_0579 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Clos_1188 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Clos_0580 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D Clos_0361 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D Clos_0178 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:aoe00350] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0073 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:aoe00360] D Clos_0088 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0073 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:aoe00380] D Clos_2733 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aoe00400] D Clos_1413 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Clos_1358 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Clos_2337 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Clos_1625 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Clos_1359 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Clos_1357 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Clos_1565 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Clos_1956 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0073 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:aoe00410] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_2455 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clos_0875 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D Clos_0636 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Clos_0091 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:aoe00430] D Clos_2459 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clos_1360 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Clos_1447 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:aoe00450] D Clos_1074 Cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clos_0080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clos_0654 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clos_0954 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clos_1738 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Clos_1736 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Clos_1003 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_1001 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_2662 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:aoe00460] D Clos_1816 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Clos_0232 Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clos_1700 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:aoe00470] D Clos_2275 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clos_0292 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clos_2008 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Clos_2068 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clos_1377 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clos_0927 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Clos_0547 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clos_0664 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D Clos_1420 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clos_0421 D-Lysine 56-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] D Clos_0422 cobalamin B12-binding domain protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] D Clos_1699 dihydrodipicolinate reductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] D Clos_1693 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12] D Clos_1695 cobalamin B12-binding domain protein K17898 oraE; D-ornithine 4,5-aminomutase subunit beta [EC:5.4.3.5] D Clos_1696 D-ornithine aminomutase S component K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5] D Clos_0033 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D Clos_0028 Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1] D Clos_0030 D-proline reductase (dithiol) K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1] C 00480 Glutathione metabolism [PATH:aoe00480] D Clos_0252 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Clos_0278 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Clos_0567 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Clos_0384 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:aoe00542] D Clos_2570 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_1597 putative glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aoe00541] D Clos_2646 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clos_2569 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clos_2515 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Clos_2509 glycosyltransferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Clos_2510 N-acylneuraminate-9-phosphate synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] C 00550 Peptidoglycan biosynthesis [PATH:aoe00550] D Clos_2555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_2779 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_1380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_0573 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clos_2649 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clos_1377 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clos_1374 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_2017 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_0298 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_0292 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clos_1375 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clos_1517 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clos_2680 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clos_0946 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clos_1376 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clos_1379 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clos_1788 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clos_1762 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clos_1654 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clos_1373 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clos_2576 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Clos_1740 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_1580 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_1588 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_0680 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clos_2859 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:aoe00552] D Clos_0946 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clos_2570 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_1597 putative glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_2269 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clos_1746 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clos_2650 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clos_0260 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:aoe00543] D Clos_2570 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_1597 putative glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_0836 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D Clos_0468 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:aoe00730] D Clos_0766 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Clos_2695 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Clos_1670 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_1814 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_1813 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clos_0992 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Clos_1607 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clos_2694 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Clos_2693 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Clos_1435 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clos_1681 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clos_0143 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clos_1437 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Clos_0513 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:aoe00740] D Clos_1532 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Clos_2694 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Clos_1595 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clos_0364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism D Clos_1954 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:aoe00760] D Clos_2666 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Clos_1590 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clos_1591 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clos_0920 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Clos_1748 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Clos_1779 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Clos_1170 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Clos_0375 molybdopterin dehydrogenase FAD-binding K20445 ndhF; nicotinate dehydrogenase FAD-subunit [EC:1.17.1.5] D Clos_0377 aldehyde oxidase and xanthine dehydrogenase a/b hammerhead K20447 ndhL; nicotinate dehydrogenase large molybdopterin subunit [EC:1.17.1.5] C 00770 Pantothenate and CoA biosynthesis [PATH:aoe00770] D Clos_0886 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clos_0446 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Clos_1425 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Clos_1443 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Clos_1207 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Clos_2276 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Clos_2492 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_0407 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_2455 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Clos_0875 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:aoe00780] D Clos_1457 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clos_2696 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_1455 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0257 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_2536 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clos_0217 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Clos_0991 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Clos_0444 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:aoe00785] D Clos_0019 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0067 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Clos_0068 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Clos_0065 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clos_0066 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:aoe00790] D Clos_0143 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clos_2028 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Clos_2157 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Clos_0570 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Clos_1812 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Clos_1811 molybdenum cofactor synthesis domain K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Clos_1174 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clos_1175 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clos_0210 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clos_1103 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clos_0219 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clos_0381 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Clos_0880 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Clos_0208 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] D Clos_2113 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] D Clos_1095 formate dehydrogenase family accessory protein FdhD K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:aoe00670] D Clos_2127 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clos_0249 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clos_0294 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Clos_1700 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clos_0540 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clos_0541 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clos_0580 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D Clos_0361 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D Clos_1428 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clos_0065 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clos_0080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clos_0472 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Clos_0078 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clos_2263 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:aoe00860] D Clos_1324 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Clos_1330 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Clos_1329 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Clos_1327 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Clos_1328 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Clos_0323 anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Clos_1023 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Clos_1021 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Clos_1019 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Clos_1020 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Clos_1022 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Clos_1326 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Clos_1016 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Clos_1018 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D Clos_1017 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Clos_1015 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Clos_0862 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Clos_2328 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Clos_0793 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clos_1352 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clos_0863 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Clos_2212 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Clos_2210 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Clos_2209 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Clos_2208 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Clos_2211 putative L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D Clos_0803 hypothetical protein K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154] D Clos_2326 Magnesium chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Clos_2327 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:aoe00130] D Clos_0364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Clos_0174 conserved hypothetical protein K09834 VTE1; tocopherol cyclase [EC:5.5.1.24] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:aoe00900] D Clos_1607 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clos_1519 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Clos_0463 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Clos_0285 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Clos_0464 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Clos_1521 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Clos_1562 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Clos_1609 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clos_1517 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clos_2680 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation D Clos_0815 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Clos_2266 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clos_2267 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:aoe01054] D Clos_0547 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Clos_1159 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Clos_0923 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:aoe00332] D Clos_0128 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clos_0127 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:aoe00261] D Clos_1159 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Clos_0545 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clos_1162 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clos_1163 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clos_1164 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:aoe00401] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0073 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D Clos_1454 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clos_2696 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_1455 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0257 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Clos_2110 acyl carrier protein K02078 acpP; acyl carrier protein D Clos_1456 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D Clos_2531 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites D Clos_1693 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:aoe00362] D Clos_0443 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clos_0442 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clos_0441 sodium pump decarboxylase, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clos_0088 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:aoe00627] D Clos_0364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Clos_2361 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clos_2360 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:aoe00625] D Clos_0626 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clos_0309 Nitrogenase K02588 nifH; nitrogenase iron protein NifH D Clos_2741 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D Clos_2741 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation D Clos_0086 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Clos_0167 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:aoe03020] D Clos_0484 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clos_0485 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clos_0521 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clos_1424 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Clos_2356 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:aoe03010] D Clos_1513 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clos_0498 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Clos_1939 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4 D Clos_0520 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Clos_0509 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Clos_0035 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clos_0488 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Clos_0506 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Clos_0528 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Clos_0491 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Clos_0519 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Clos_0487 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Clos_0518 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Clos_0505 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Clos_1533 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Clos_1464 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clos_0501 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Clos_0037 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Clos_0496 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Clos_1225 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Clos_1239 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clos_0481 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Clos_0495 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Clos_0492 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Clos_0493 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Clos_0504 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clos_0507 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Clos_0483 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clos_2798 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Clos_0482 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Clos_0480 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Clos_0527 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Clos_0502 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Clos_0511 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Clos_0499 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Clos_0522 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clos_0508 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Clos_1468 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Clos_1976 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Clos_1753 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Clos_0497 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Clos_0494 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Clos_0503 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Clos_0045 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Clos_0044 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Clos_1751 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clos_1438 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Clos_0500 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Clos_0510 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Clos_2590 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clos_1449 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clos_0477 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Clos_2877 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Clos_1977 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clos_0517 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Clos_0486 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Clos_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0071 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0115 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0087 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0069 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0113 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0084 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0068 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0112 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:aoe00970] D Clos_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0086 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0114 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0105 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0083 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0111 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0056 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0067 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0108 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0078 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0092 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0061 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clos_R0046 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clos_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clos_R0104 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clos_R0040 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clos_R0052 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0080 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0064 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0089 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0106 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0074 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0021 tRNA-His K14226 tRNA-His; tRNA His D Clos_R0041 tRNA-His K14226 tRNA-His; tRNA His D Clos_R0096 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clos_R0073 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clos_R0070 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clos_R0055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0066 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0082 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0103 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0088 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0094 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0099 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0054 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0065 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0081 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0034 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0072 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0095 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0062 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clos_R0097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clos_R0100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clos_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0102 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0101 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0077 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0091 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0107 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0028 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0098 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clos_R0044 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clos_R0090 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clos_R0076 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clos_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0093 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0079 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0109 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0063 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0033 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Clos_0467 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Clos_0176 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Clos_1666 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clos_2681 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clos_1709 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clos_2341 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clos_1255 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clos_1980 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clos_0014 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clos_1736 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Clos_0469 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clos_1003 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_1001 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_2662 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_1428 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clos_2038 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clos_2587 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clos_2197 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clos_0450 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clos_2740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clos_0465 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clos_1710 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clos_1972 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clos_1971 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clos_0921 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clos_2123 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:aoe03060] D Clos_0512 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clos_0478 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clos_0974 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clos_1721 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clos_2874 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clos_2485 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clos_1463 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clos_R0006 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Clos_1461 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clos_1110 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Clos_0548 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Clos_2146 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Clos_1101 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Clos_2137 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Clos_2011 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clos_0906 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clos_0130 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clos_1416 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clos_1083 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:aoe04122] D Clos_1670 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_1814 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_0398 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Clos_1962 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Clos_0891 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clos_0570 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Clos_1321 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Clos_1322 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Clos_1812 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Clos_1811 molybdenum cofactor synthesis domain K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Clos_1813 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:aoe03018] D Clos_0973 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clos_1534 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clos_0977 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clos_1218 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clos_2340 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clos_0979 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Clos_2591 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Clos_1543 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clos_1660 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clos_1233 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clos_2034 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Clos_2447 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clos_1551 RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:aoe03030] D Clos_0583 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clos_1523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clos_2856 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clos_0062 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clos_1224 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clos_2797 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clos_1278 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Clos_1881 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_1283 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Clos_1470 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clos_1206 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clos_0550 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:aoe03410] D Clos_2450 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clos_0910 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clos_0642 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Clos_2291 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Clos_1158 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Clos_0146 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Clos_1797 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Clos_2318 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clos_0337 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clos_1206 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clos_1716 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clos_0550 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:aoe03420] D Clos_2642 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clos_2257 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clos_1323 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clos_2258 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Clos_2255 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Clos_0358 Excinuclease ABC C subunit domain protein K03703 uvrC; excinuclease ABC subunit C D Clos_0549 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_1817 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_0691 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_1206 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clos_0550 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clos_2356 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:aoe03430] D Clos_1554 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Clos_1836 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clos_0420 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clos_2699 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clos_1553 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Clos_0549 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_1817 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_0691 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_1611 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clos_1610 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clos_1716 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clos_1881 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0583 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clos_1523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clos_2856 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clos_1224 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clos_0062 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clos_0550 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:aoe03440] D Clos_1716 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clos_1881 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Clos_1253 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clos_2854 recombination protein RecR K06187 recR; recombination protein RecR D Clos_1542 recA protein K03553 recA; recombination protein RecA D Clos_1206 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clos_1726 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Clos_1725 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clos_1727 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Clos_1441 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clos_2814 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clos_2526 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clos_0583 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clos_1523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clos_2856 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clos_1224 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clos_0062 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clos_1426 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:aoe02010] D Clos_2434 extracellular solute-binding protein family 1 K05772 tupA; tungstate transport system substrate-binding protein D Clos_2216 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Clos_2215 ABC transporter related K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Clos_0302 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D Clos_0303 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Clos_0304 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clos_2284 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Clos_2283 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Clos_2282 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Clos_2537 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clos_2538 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein D Clos_2539 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Clos_2540 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clos_2019 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Clos_2020 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Clos_2021 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Clos_0961 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clos_2380 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clos_2378 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Clos_0965 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Clos_2377 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Clos_0966 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Clos_0964 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Clos_2379 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Clos_1116 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clos_0266 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clos_1117 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Clos_0267 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Clos_1118 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Clos_0268 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Clos_1119 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clos_0269 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clos_0183 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Clos_0184 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Clos_0185 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Clos_0722 extracellular solute-binding protein family 3 K17073 lysX1; putative lysine transport system substrate-binding protein D Clos_0723 polar amino acid ABC transporter, inner membrane subunit K17074 lysX2; putative lysine transport system permease protein D Clos_0724 ABC transporter related K17076 lysY; putative lysine transport system ATP-binding protein D Clos_2502 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Clos_2501 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Clos_2500 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Clos_2499 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Clos_2498 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Clos_0544 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Clos_0126 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Clos_0125 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein D Clos_2160 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clos_2431 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Clos_2430 transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D Clos_2429 transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D Clos_2428 ABC transporter related K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Clos_2136 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Clos_2134 ABC-3 protein K09816 znuB; zinc transport system permease protein D Clos_2135 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clos_1012 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein D Clos_1011 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Clos_1013 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Clos_1014 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Clos_1730 BioY protein K03523 bioY; biotin transport system substrate-specific component D Clos_0525 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Clos_0523 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clos_0524 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clos_2081 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Clos_2082 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Clos_2261 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clos_0661 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clos_2262 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clos_0660 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein D Clos_0684 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Clos_0685 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Clos_1181 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_1180 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_0821 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_2678 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_0820 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_2677 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_0945 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:aoe03070] D Clos_0478 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clos_0974 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clos_0512 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clos_1721 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clos_2874 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clos_2485 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clos_1461 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clos_1463 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clos_0548 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Clos_2146 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Clos_1101 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Clos_2137 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Clos_1912 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:aoe02020] D Clos_1393 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clos_1392 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clos_0143 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clos_1116 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clos_0266 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clos_0668 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clos_0667 two component transcriptional regulator, winged helix family K07770 cssR; two-component system, OmpR family, response regulator CssR D Clos_2479 flagellin domain protein K02406 fliC; flagellin D Clos_2518 flagellin domain protein K02406 fliC; flagellin D Clos_1510 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Clos_1490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clos_0610 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clos_0860 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clos_0611 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clos_0861 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clos_2783 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clos_2784 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Clos_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clos_2081 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Clos_2082 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Clos_2083 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clos_2084 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Clos_0983 integral membrane sensor signal transduction histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3] D Clos_0325 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clos_0680 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clos_2861 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Clos_0839 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Clos_2860 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35] D Clos_2859 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D Clos_0944 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clos_0943 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clos_1602 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clos_2832 response regulator receiver protein K11641 natR; two-component system, LytTR family, response regulator NatR D Clos_0235 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_0428 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_2245 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_2494 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Clos_1194 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clos_1195 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Clos_1907 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clos_1905 hypothetical protein K12511 tadC; tight adherence protein C D Clos_2098 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clos_1079 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Clos_2361 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Clos_2360 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Clos_0635 short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0967 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Clos_1635 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clos_1560 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clos_0241 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2789 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0186 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_1056 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2609 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_0881 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0052 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0250 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_0897 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0354 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2075 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2384 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2204 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2370 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2483 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2519 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_1192 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clos_1507 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clos_1506 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clos_1495 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clos_1505 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clos_1960 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Clos_2132 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Clos_2008 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Clos_0179 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clos_2472 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clos_0180 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clos_2569 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clos_2523 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Clos_0227 arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:aoe02024] D Clos_1075 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Clos_1551 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clos_0611 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clos_0861 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clos_2502 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Clos_2501 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Clos_2500 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Clos_2499 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Clos_2498 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Clos_2132 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Clos_2853 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clos_0235 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_0428 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_2245 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_0325 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clos_2160 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clos_1209 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clos_1341 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clos_1347 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clos_1342 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clos_1348 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clos_1343 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clos_2161 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clos_1349 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clos_2159 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clos_1350 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clos_1344 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clos_2158 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clos_1351 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clos_1345 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clos_2874 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clos_0478 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clos_0974 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clos_0512 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clos_1721 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clos_2485 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clos_1461 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clos_1463 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clos_1195 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Clos_1602 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clos_0234 transcriptional regulator, XRE family K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:aoe02030] D Clos_0241 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2789 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0186 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_1056 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2609 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_0881 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0052 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0250 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_0897 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0354 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2075 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2384 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2204 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2370 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2483 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2519 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_1506 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clos_1192 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clos_1507 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clos_1495 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clos_1508 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Clos_1214 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clos_1505 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clos_1960 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Clos_1509 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clos_1560 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clos_1480 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clos_1494 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clos_1490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clos_1491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:aoe02040] D Clos_1478 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clos_1479 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Clos_1480 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clos_1481 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Clos_1482 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clos_1483 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Clos_1485 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Clos_1492 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Clos_1494 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clos_1496 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Clos_1497 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clos_1498 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clos_1499 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Clos_1501 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clos_1500 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clos_1476 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clos_1477 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clos_1486 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clos_1488 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE D Clos_2550 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D Clos_2549 protein of unknown function DUF1078 domain protein K02392 flgG; flagellar basal-body rod protein FlgG D Clos_2548 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Clos_2521 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clos_2520 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clos_2479 flagellin domain protein K02406 fliC; flagellin D Clos_2518 flagellin domain protein K02406 fliC; flagellin D Clos_2490 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Clos_2489 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clos_2478 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clos_1490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clos_1491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Clos_2523 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Clos_1279 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor D Clos_0967 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Clos_1510 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Clos_0973 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:aoe04980] D Clos_0793 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clos_1352 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clos_0438 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D Clos_0080 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:aoe01501] D Clos_2373 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Clos_2160 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clos_0923 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Clos_1788 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clos_1762 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clos_1654 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:aoe01502] D Clos_0292 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clos_2275 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clos_1375 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clos_1376 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clos_1379 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clos_2859 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D Clos_2860 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35] D Clos_0680 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clos_2861 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Clos_0839 VanW family protein K18346 vanW; vancomycin resistance protein VanW C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aoe01503] D Clos_0530 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_0554 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_0155 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_2218 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:aoe01000] C 01001 Protein kinases [BR:aoe01001] D Clos_1434 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clos_0009 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clos_0430 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D Clos_1393 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clos_0668 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clos_0610 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clos_0860 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clos_2783 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clos_2083 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clos_0983 integral membrane sensor signal transduction histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3] D Clos_0325 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clos_0944 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clos_1194 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clos_1336 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Clos_0203 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clos_1506 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clos_0179 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clos_2791 integral membrane sensor hybrid histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS C 01009 Protein phosphatases and associated proteins [BR:aoe01009] D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clos_1676 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Clos_1433 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Clos_0343 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:aoe01002] D Clos_1416 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clos_1083 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clos_1634 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clos_1226 spore protease K06012 gpr; spore protease [EC:3.4.24.78] D Clos_1386 peptidase U4 sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Clos_2359 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D Clos_0534 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clos_1944 Peptidoglycan-binding LysM K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-] D Clos_0538 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clos_2836 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clos_0235 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_0428 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_2245 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Clos_0779 Abortive infection protein K07052 K07052; CAAX protease family protein D Clos_2014 Abortive infection protein K07052 K07052; CAAX protease family protein D Clos_1166 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Clos_0680 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clos_2859 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D Clos_1941 Peptidase M16C associated domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D Clos_0278 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Clos_0299 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Clos_2654 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Clos_0567 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Clos_0514 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Clos_2743 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Clos_1156 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Clos_0663 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Clos_2310 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_0432 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_1173 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_1979 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_2314 peptidase M42 family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-] D Clos_1757 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Clos_1520 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Clos_1006 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D Clos_2013 conserved hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Clos_2786 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-] D Clos_1740 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_1580 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_1588 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_2174 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Clos_2171 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Clos_2172 Sporulation protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Clos_1549 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Clos_2011 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clos_0906 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clos_0130 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clos_2259 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Clos_0113 peptidase S51 dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D Clos_2107 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D Clos_1603 Peptidase S55 sporulation stage IV protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Clos_0401 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Clos_1969 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clos_1656 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clos_2087 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Clos_2088 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:aoe01003] D Clos_0260 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Clos_1788 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clos_2269 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clos_2570 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_1597 putative glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:aoe01005] D Clos_2570 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clos_1597 putative glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aoe01011] D Clos_2555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_2779 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_1380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clos_0573 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clos_2649 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clos_1377 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clos_1374 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_2017 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_0298 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clos_0292 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clos_2275 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clos_2068 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clos_0401 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Clos_1376 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clos_1379 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clos_0946 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clos_1788 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clos_1762 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clos_1654 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clos_1373 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clos_2576 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Clos_1740 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_1580 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_1588 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clos_0680 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clos_2859 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D Clos_1944 Peptidoglycan-binding LysM K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-] D Clos_1208 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clos_0057 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Clos_2072 Spore cortex-lytic enzyme SleB K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clos_1724 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clos_2554 Sporulation stage II protein D firmicutes K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clos_2635 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clos_0281 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clos_0530 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_0554 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_0155 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_2218 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:aoe01004] D Clos_1454 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clos_1452 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clos_1457 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clos_2696 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_1455 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_0257 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clos_2536 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clos_1453 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Clos_1451 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clos_1400 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clos_1563 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:aoe01008] D Clos_1159 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Clos_0547 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:aoe01006] D Clos_1609 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clos_1517 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clos_2680 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clos_1552 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:aoe01007] D Clos_0176 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Clos_0467 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Clos_0921 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clos_2123 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clos_0469 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clos_2740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clos_1003 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_1001 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_2662 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_2197 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clos_2038 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clos_2587 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clos_0450 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clos_1709 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clos_2341 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clos_1710 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clos_1255 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clos_0014 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clos_0465 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clos_1980 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clos_1666 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clos_2681 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clos_1972 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clos_1971 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clos_1546 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_0851 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Clos_2023 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clos_0073 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clos_0909 pyridoxal phosphate-dependent acyltransferase, putative K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Clos_2419 aminotransferase class-III K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D Clos_1330 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Clos_2492 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clos_0407 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:aoe00194] D Clos_2559 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Clos_2560 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Clos_2561 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Clos_2562 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Clos_2563 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Clos_2564 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Clos_2565 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Clos_2566 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clos_2568 conserved hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:aoe03000] D Clos_1897 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1855 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2029 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2744 transcriptional regulator, AraC family K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D Clos_2846 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Clos_2745 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Clos_2321 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Clos_2726 transcription activator effector binding K13653 K13653; AraC family transcriptional regulator D Clos_0146 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Clos_1026 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Clos_1030 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Clos_2342 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D Clos_2552 Sporulation stage III transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Clos_1256 Helix-turn-helix type 11 domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D Clos_2456 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clos_0769 putative transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Clos_2691 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D Clos_2732 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Clos_2679 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Clos_1185 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Clos_1661 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Clos_0918 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Clos_0618 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Clos_2132 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Clos_2047 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Clos_2178 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Clos_2381 cyclic nucleotide-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Clos_1671 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clos_2820 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Clos_1107 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Clos_1112 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Clos_1085 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clos_2163 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clos_1086 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clos_1121 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clos_0082 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Clos_2352 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Clos_1270 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Clos_0444 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Clos_0048 putative sigma54 specific transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D Clos_0234 transcriptional regulator, XRE family K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR D Clos_2022 transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D Clos_2648 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Clos_1806 putative sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Clos_2051 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Clos_0069 putative sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Clos_0171 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Clos_0812 putative sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Clos_0416 PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein D Clos_0187 putative sigma54 specific transcriptional regulator K06714 rocR; arginine utilization regulatory protein D Clos_2496 PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein D Clos_2464 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Clos_1475 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D Clos_1274 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Clos_2349 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Clos_0777 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Clos_1852 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Clos_1287 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Clos_2274 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Clos_0053 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Clos_1065 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Clos_0295 transcriptional regulator, CdaR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Clos_2667 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Clos_2640 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Clos_2867 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_2869 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_1923 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_0460 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Clos_1136 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator D Clos_1605 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Clos_1231 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Clos_1042 phage shock protein C, PspC K03973 pspC; phage shock protein C D Clos_0968 transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator D Clos_1418 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Clos_1390 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Clos_1370 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:aoe03021] D Clos_2356 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clos_0521 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clos_0484 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clos_0485 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clos_1424 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clos_1279 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor D Clos_2183 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clos_0647 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clos_0782 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clos_2757 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clos_1093 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clos_0010 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03090 sigB; RNA polymerase sigma-B factor D Clos_1794 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clos_1653 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clos_1387 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clos_1388 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clos_0475 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Clos_2673 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03093 sigI; RNA polymerase sigma-I factor D Clos_0157 putative RNA polymerase, sigma 28 subunit, FliA/WhiG family K26992 sigO; RNA polymerase sigma-O factor D Clos_0967 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Clos_1510 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Clos_1525 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Clos_1613 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Clos_0479 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Clos_2100 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Clos_0833 alpha/beta hydrolase fold K19707 rsbQ; sigma-B regulation protein RsbQ D Clos_0008 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Clos_0009 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clos_1060 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Clos_1706 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Clos_0449 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Clos_2591 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:aoe03019] D Clos_1754 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Clos_1458 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clos_1660 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clos_1543 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clos_0977 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clos_2324 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Clos_1218 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clos_2340 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clos_0979 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Clos_0973 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clos_1534 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clos_2591 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Clos_0585 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clos_1233 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clos_2034 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Clos_2447 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clos_1551 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clos_2494 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Clos_0574 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome [BR:aoe03041] C 03011 Ribosome [BR:aoe03011] D Clos_1513 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clos_0498 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Clos_1939 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4 D Clos_0520 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Clos_0509 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Clos_0035 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clos_0488 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Clos_0506 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Clos_0528 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Clos_0491 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Clos_0519 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Clos_0487 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Clos_0518 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Clos_0505 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Clos_1533 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Clos_1464 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clos_0501 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Clos_0037 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Clos_0496 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Clos_1225 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Clos_1239 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clos_0481 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Clos_0495 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Clos_0492 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Clos_0493 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Clos_0504 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clos_0507 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Clos_2798 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Clos_0482 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Clos_0480 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Clos_0483 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clos_0527 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Clos_0502 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Clos_0511 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Clos_0499 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Clos_0522 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clos_0508 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Clos_1468 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Clos_1976 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Clos_1753 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Clos_0497 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Clos_0494 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Clos_0503 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Clos_1751 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clos_1438 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Clos_0500 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Clos_0510 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Clos_2590 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clos_1449 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clos_0477 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Clos_2877 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Clos_1977 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clos_0517 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Clos_0045 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Clos_0044 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Clos_0486 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Clos_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0084 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0068 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0112 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0071 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0115 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0087 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0069 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0113 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:aoe03009] D Clos_1458 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clos_1252 GTP-binding protein Era K03595 era; GTPase D Clos_1750 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Clos_1525 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Clos_1613 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Clos_0479 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Clos_0721 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Clos_2657 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Clos_1431 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Clos_1236 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Clos_2870 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clos_1371 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Clos_2668 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Clos_1606 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Clos_0995 Methyltransferase type 11 K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Clos_0473 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Clos_2775 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Clos_0689 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Clos_1432 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Clos_0590 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Clos_1577 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Clos_1171 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clos_0690 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clos_1417 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clos_1731 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Clos_2851 rRNA (adenine-N(6)-)-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D Clos_2468 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Clos_2730 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D Clos_1466 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Clos_0582 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Clos_1235 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Clos_1754 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Clos_1663 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Clos_0470 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Clos_1218 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clos_2340 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Clos_1435 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clos_1681 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clos_1399 small GTP-binding protein K03977 engA; GTPase D Clos_1469 GTP-binding protein HSR1-related K14540 rbgA; ribosome biogenesis GTPase A D Clos_1786 GTP-binding protein HSR1-related K03665 hflX; GTPase D Clos_0996 GTP-binding protein HSR1-related K03665 hflX; GTPase D Clos_2575 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clos_1714 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clos_1529 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Clos_1524 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Clos_0003 RNA-binding S4 domain protein K14761 rlbA; ribosome-associated protein D Clos_1745 iojap-like protein K09710 ybeB; ribosome-associated protein D Clos_1248 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Clos_1749 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Clos_2487 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Clos_1364 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Clos_1448 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:aoe03016] D Clos_1683 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Clos_2367 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Clos_1938 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Clos_0465 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clos_2197 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clos_2587 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clos_1003 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_1001 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_2662 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clos_0176 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Clos_2740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clos_0450 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clos_1709 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clos_1666 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clos_2681 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clos_2341 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clos_1255 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clos_1980 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clos_0014 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clos_0469 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clos_2038 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clos_1710 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clos_1972 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clos_1971 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clos_0921 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clos_2123 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clos_1713 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Clos_1238 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clos_2120 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Clos_1682 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Clos_0526 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Clos_1531 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Clos_1670 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_1814 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_2575 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clos_1552 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clos_2872 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Clos_2871 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clos_1738 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Clos_2876 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Clos_R0032 RNA component of RNaseP K01978 rnpB; M1 RNA D Clos_0557 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Clos_0467 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Clos_0937 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Clos_2368 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D Clos_0018 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Clos_0447 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Clos_1555 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Clos_1237 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Clos_1467 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Clos_1281 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Clos_0951 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Clos_1973 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Clos_0891 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clos_1038 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Clos_1962 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Clos_1723 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Clos_0907 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Clos_1540 Rhodanese domain protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D Clos_1722 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Clos_1813 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clos_0431 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Clos_2469 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Clos_2467 putative metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Clos_2470 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Clos_1707 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Clos_1446 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Clos_0977 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clos_1534 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:aoe03012] D Clos_1528 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Clos_1978 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clos_2465 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Clos_2299 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Clos_1514 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clos_0476 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clos_0490 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clos_0453 translation elongation factor G K02355 fusA; elongation factor G D Clos_0489 translation elongation factor G K02355 fusA; elongation factor G D Clos_1735 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D Clos_2580 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Clos_1516 ribosome recycling factor K02838 frr; ribosome recycling factor D Clos_2581 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Clos_2644 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Clos_0516 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Clos_1624 translation elongation factor P K02356 efp; elongation factor P D Clos_2484 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Clos_0711 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:aoe03110] D Clos_0456 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clos_0137 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clos_2173 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Clos_1676 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Clos_1233 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clos_2034 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Clos_2447 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clos_1234 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clos_2003 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Clos_1232 GrpE protein K03687 GRPE; molecular chaperone GrpE D Clos_2448 chaperonin Cpn10 K04078 groES; chaperonin GroES D Clos_2310 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_0432 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_1173 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_1979 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clos_2566 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Clos_1098 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Clos_0206 conserved hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Clos_0898 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Clos_2641 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Clos_0228 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Clos_0653 thioredoxin K03671 TXN; thioredoxin D Clos_0955 Thioredoxin domain K03671 TXN; thioredoxin D Clos_2422 glutaredoxin 3 K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:aoe04131] D Clos_1045 band 7 protein K07192 FLOT; flotillin D Clos_1110 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Clos_0604 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0716 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0969 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0586 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clos_1676 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:aoe04121] C 03051 Proteasome [BR:aoe03051] D Clos_1676 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:aoe03032] D Clos_1283 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Clos_1897 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1855 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2029 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2637 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clos_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clos_2797 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clos_2795 Chromosomal replication initiator DnaA K02315 dnaC; DNA replication protein DnaC D Clos_1054 conserved hypothetical protein K02315 dnaC; DNA replication protein DnaC D Clos_1278 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Clos_1881 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0583 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clos_1523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clos_1224 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clos_0062 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clos_2856 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clos_1470 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clos_1206 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clos_0550 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clos_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clos_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clos_1474 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clos_2155 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D Clos_1034 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:aoe03036] D Clos_1897 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1855 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2029 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1458 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clos_1045 band 7 protein K07192 FLOT; flotillin D Clos_2637 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clos_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Clos_0831 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D Clos_1551 RNA chaperone Hfq K03666 hfq; host factor-I protein D Clos_2732 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Clos_1460 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Clos_1587 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Clos_1586 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D Clos_2632 Septum formation initiator K13052 divIC; cell division protein DivIC D Clos_2262 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clos_0660 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein D Clos_1539 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clos_1372 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Clos_1381 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Clos_1378 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Clos_2261 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clos_0661 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clos_1385 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clos_1970 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Clos_0530 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_0554 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_0155 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_2218 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_1761 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Clos_1760 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Clos_1759 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Clos_1411 DivIVA family protein K04074 divIVA; cell division initiation protein D Clos_1408 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF D Clos_2551 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clos_1765 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clos_1764 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Clos_1763 conserved hypothetical protein K03571 mreD; rod shape-determining protein MreD D Clos_2074 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Clos_2868 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Clos_1924 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Clos_2867 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_2869 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_1923 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_2871 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clos_2870 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clos_1827 integrase family protein K04763 xerD; integrase/recombinase XerD D Clos_1593 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Clos_2623 integrase family protein K04763 xerD; integrase/recombinase XerD D Clos_2638 MazG nucleotide pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D Clos_1921 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Clos_2170 small GTP-binding protein K03978 engB; GTP-binding protein D Clos_0578 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:aoe03400] D Clos_0145 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Clos_0936 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Clos_0642 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Clos_1158 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Clos_2291 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Clos_2450 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clos_0910 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clos_2356 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clos_2044 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clos_2045 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clos_2840 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clos_1150 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clos_2852 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clos_0146 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Clos_1797 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Clos_2318 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clos_0337 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clos_1716 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clos_0550 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clos_1206 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clos_2257 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clos_1323 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Clos_2258 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Clos_2255 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Clos_0358 Excinuclease ABC C subunit domain protein K03703 uvrC; excinuclease ABC subunit C D Clos_0549 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_1817 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_0691 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clos_0484 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clos_0485 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clos_0521 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clos_1424 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clos_2642 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clos_1554 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Clos_1836 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clos_0420 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clos_2699 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Clos_1553 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Clos_1611 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clos_1610 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clos_0583 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clos_1523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clos_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clos_1224 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clos_0062 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clos_2856 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clos_1881 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_2526 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clos_1542 recA protein K03553 recA; recombination protein RecA D Clos_1726 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Clos_1725 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clos_1727 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Clos_1426 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Clos_2288 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Clos_2289 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Clos_0457 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Clos_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Clos_1441 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clos_2814 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clos_1253 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clos_2854 recombination protein RecR K06187 recR; recombination protein RecR D Clos_1604 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Clos_2290 Recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Clos_2300 ATP-dependent nuclease subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Clos_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clos_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clos_1474 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clos_2637 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clos_0979 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Clos_1678 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clos_1549 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Clos_1601 regulatory protein RecX K03565 recX; regulatory protein D Clos_1530 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:aoe03029] D Clos_1528 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Clos_1978 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Clos_1514 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clos_0476 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clos_0490 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clos_0453 translation elongation factor G K02355 fusA; elongation factor G D Clos_0489 translation elongation factor G K02355 fusA; elongation factor G D Clos_1252 GTP-binding protein Era K03595 era; GTPase D Clos_0921 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clos_2587 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clos_1709 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clos_1255 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clos_2740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clos_1881 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Clos_1233 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clos_2034 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Clos_1232 GrpE protein K03687 GRPE; molecular chaperone GrpE D Clos_2447 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clos_2448 chaperonin Cpn10 K04078 groES; chaperonin GroES D Clos_1234 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clos_1670 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_1814 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_2874 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clos_1676 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:aoe02000] D Clos_0684 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Clos_0685 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Clos_1181 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_1180 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_0821 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_2678 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_0820 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_2677 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clos_0038 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clos_0039 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clos_1945 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clos_1946 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clos_0233 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clos_0945 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Clos_2066 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein D Clos_2284 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Clos_2283 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Clos_2282 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Clos_2434 extracellular solute-binding protein family 1 K05772 tupA; tungstate transport system substrate-binding protein D Clos_2216 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Clos_2215 ABC transporter related K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Clos_0302 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D Clos_0303 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Clos_0304 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clos_2537 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clos_2538 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein D Clos_2539 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Clos_2540 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clos_2019 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Clos_2020 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Clos_2021 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Clos_0932 putative sulfonate/nitrate transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clos_2041 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clos_0933 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clos_2094 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clos_0934 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clos_2093 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clos_0961 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clos_2380 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Clos_2378 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Clos_0965 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Clos_2377 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Clos_0966 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Clos_0964 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Clos_2379 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Clos_0572 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clos_0631 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein D Clos_0630 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein D Clos_0629 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clos_1116 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clos_0266 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Clos_1117 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Clos_0267 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Clos_1118 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Clos_0268 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Clos_1119 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clos_0269 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clos_0183 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Clos_0184 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Clos_0185 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Clos_2502 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Clos_2501 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Clos_2500 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Clos_2499 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Clos_2498 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Clos_0544 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Clos_0126 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Clos_0125 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein D Clos_2702 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Clos_2705 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Clos_2703 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Clos_2704 ABC transporter related K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Clos_0722 extracellular solute-binding protein family 3 K17073 lysX1; putative lysine transport system substrate-binding protein D Clos_0723 polar amino acid ABC transporter, inner membrane subunit K17074 lysX2; putative lysine transport system permease protein D Clos_0724 ABC transporter related K17076 lysY; putative lysine transport system ATP-binding protein D Clos_2594 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clos_2685 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clos_2593 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Clos_2682 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Clos_2683 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Clos_2684 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Clos_2592 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Clos_2160 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Clos_1209 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clos_1341 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clos_1347 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clos_1342 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clos_1348 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clos_1343 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clos_2161 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clos_1349 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clos_2159 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clos_1350 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clos_1344 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clos_2158 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clos_1351 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clos_1345 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Clos_0310 periplasmic binding protein K25113 htsA; heme transport system substrate-binding protein D Clos_0311 transport system permease protein K25114 htsB; heme transport system permease protein D Clos_0312 ABC transporter related K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5] D Clos_2431 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Clos_2430 transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D Clos_2429 transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D Clos_2428 ABC transporter related K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Clos_2330 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_0197 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_0215 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_0218 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_0220 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_2813 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_0318 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Clos_2329 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Clos_0319 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Clos_0213 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Clos_2811 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Clos_2812 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Clos_0195 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Clos_0320 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Clos_0214 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Clos_2810 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Clos_0196 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Clos_0948 iron compound ABC transporter, periplasmic iron compound-binding protein, putative K25034 btuF; cobalamin transport system substrate-binding protein D Clos_0915 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Clos_0916 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Clos_0949 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Clos_0917 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Clos_0950 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Clos_2136 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Clos_2134 ABC-3 protein K09816 znuB; zinc transport system permease protein D Clos_2135 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clos_1012 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein D Clos_1013 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Clos_1011 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Clos_1014 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Clos_1730 BioY protein K03523 bioY; biotin transport system substrate-specific component D Clos_2437 conserved hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D Clos_0525 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Clos_0523 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clos_0524 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clos_2583 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein D Clos_2584 ABC-2 type transporter K25143 lnrM; linearmycin/streptolysin S transport system permease protein D Clos_2585 ABC transporter related K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D Clos_2081 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Clos_2082 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Clos_2261 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clos_0661 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Clos_2262 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clos_0660 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein D Clos_0706 hypothetical protein K25157 ecsB; ABC-2 type transport system permease protein D Clos_0705 ABC transporter related K25158 ecsA; ABC-2 type transport system ATP-binding protein D Clos_2453 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clos_0123 putative ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clos_1091 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Clos_2750 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clos_0322 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Clos_0709 conserved hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clos_0708 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clos_2454 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clos_0321 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clos_1092 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clos_2751 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clos_0122 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clos_1201 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_1268 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_0754 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_0981 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_0142 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_2614 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_2618 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_0730 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_1942 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D Clos_1267 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_0729 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_0755 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_2619 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_0141 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_0980 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_1200 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_2616 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clos_1148 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D Clos_0177 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Clos_0883 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Clos_0331 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clos_0856 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clos_0947 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clos_1808 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clos_0244 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clos_1966 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Clos_1958 hypothetical protein K10716 kch; voltage-gated potassium channel D Clos_0429 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D Clos_1332 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Clos_0935 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D Clos_2073 magnesium transporter K06213 mgtE; magnesium transporter D Clos_1490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clos_1491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Clos_1936 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Clos_2426 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clos_0671 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clos_0802 microcompartments protein K04027 eutM; ethanolamine utilization protein EutM D Clos_2720 spore germination protein K06296 gerKB; spore germination protein KB D Clos_0289 spore germination protein K06311 yndE; spore germination protein D Clos_0316 spore germination protein K06311 yndE; spore germination protein D Clos_0655 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Clos_1081 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Clos_2579 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Clos_0838 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Clos_2747 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family D Clos_2853 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clos_2286 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter D Clos_2543 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Clos_0922 Citrate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Clos_0255 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Clos_0274 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Clos_2674 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Clos_2739 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Clos_2497 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Clos_0858 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein D Clos_1975 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Clos_0674 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Clos_0673 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Clos_1974 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Clos_0859 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Clos_2458 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease D Clos_1951 uracil-xanthine permease K02824 uraA; uracil permease D Clos_0576 uracil-xanthine permease K02824 uraA; uracil permease D Clos_0867 uracil-xanthine permease K02824 uraA; uracil permease D Clos_0535 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Clos_0373 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Clos_2707 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Clos_1271 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter D Clos_1024 Chromate transporter K07240 chrA; chromate transporter D Clos_1025 Chromate transporter K07240 chrA; chromate transporter D Clos_2675 Chromate transporter K07240 chrA; chromate transporter D Clos_2676 Chromate transporter K07240 chrA; chromate transporter D Clos_0828 Chromate transporter K07240 chrA; chromate transporter D Clos_0829 Chromate transporter K07240 chrA; chromate transporter D Clos_1133 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Clos_2109 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Clos_2024 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter D Clos_1110 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Clos_1114 arsenical-resistance protein K03325 ACR3; arsenite transporter D Clos_1177 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Clos_2065 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Clos_2639 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Clos_2841 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Clos_0190 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Clos_0191 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Clos_2474 conserved hypothetical protein K23675 fmnP; riboflavin transporter D Clos_0240 putative proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter D Clos_1687 membrane protein K16788 niaX; niacin transporter D Clos_1378 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Clos_0975 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Clos_0443 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clos_1574 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Clos_0440 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Clos_0442 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clos_0441 sodium pump decarboxylase, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clos_2717 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Clos_1072 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Clos_1983 FeoA family protein K04758 feoA; ferrous iron transport protein A D Clos_2714 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Clos_1984 GTP-binding protein HSR1-related K04759 feoB; ferrous iron transport protein B D Clos_2542 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Clos_1140 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:aoe02044] D Clos_1634 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clos_1635 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clos_1638 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Clos_1636 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Clos_1633 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clos_1632 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D Clos_1631 Peptidoglycan-binding LysM K02664 pilO; type IV pilus assembly protein PilO D Clos_1637 twitching motility protein K02669 pilT; twitching motility protein PilT D Clos_1907 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clos_1905 hypothetical protein K12511 tadC; tight adherence protein C D Clos_1409 protein of unknown function YGGT K02221 yggT; YggT family protein D Clos_1739 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Clos_2571 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clos_1221 beta-lactamase domain protein K02238 comEC; competence protein ComEC D Clos_1223 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Clos_1152 beta-lactamase domain protein K02238 comEC; competence protein ComEC D Clos_1882 peptidase A24A prepilin type IV K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clos_1501 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clos_1500 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clos_2480 flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein D Clos_1479 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Clos_1481 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Clos_1482 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clos_1494 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clos_1496 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Clos_1497 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clos_1498 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clos_1499 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Clos_1912 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Clos_2485 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clos_0478 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Clos_0974 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Clos_0512 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Clos_1463 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clos_1461 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Clos_1721 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Clos_2874 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clos_0548 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Clos_2146 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Clos_1101 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Clos_2137 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:aoe02042] D Clos_0261 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B D Clos_2426 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clos_0671 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clos_0399 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:aoe02022] D Clos_1393 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clos_1392 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clos_0668 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Clos_0667 two component transcriptional regulator, winged helix family K07770 cssR; two-component system, OmpR family, response regulator CssR D Clos_0610 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clos_0860 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Clos_0611 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clos_0861 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Clos_2783 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clos_2784 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Clos_2083 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Clos_2084 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Clos_0983 integral membrane sensor signal transduction histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3] D Clos_0325 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Clos_0944 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clos_0943 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clos_1202 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Clos_1194 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clos_1195 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Clos_1602 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clos_2832 response regulator receiver protein K11641 natR; two-component system, LytTR family, response regulator NatR D Clos_1336 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Clos_1335 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Clos_2247 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Clos_2790 response regulator receiver and SARP domain protein K02477 K02477; two-component system, LytTR family, response regulator D Clos_1079 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Clos_0203 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Clos_1506 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clos_1495 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clos_1505 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clos_1960 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Clos_0179 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clos_2472 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clos_0180 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Clos_2791 integral membrane sensor hybrid histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS C 02035 Bacterial motility proteins [BR:aoe02035] D Clos_1506 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clos_1192 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clos_1507 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Clos_1214 CheC domain protein K03409 cheX; chemotaxis protein CheX D Clos_1508 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Clos_1509 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clos_1560 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clos_1505 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clos_1495 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clos_1960 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Clos_0241 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2789 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0186 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_1056 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2609 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_0881 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0052 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0250 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_0897 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_0354 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2075 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2384 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2204 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2370 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_2483 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clos_2519 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Clos_1481 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Clos_1482 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clos_1483 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Clos_1496 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Clos_1497 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Clos_1498 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clos_1499 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Clos_1501 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clos_1500 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clos_1480 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Clos_1494 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Clos_1479 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Clos_1492 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Clos_1478 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clos_1485 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Clos_1476 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clos_1477 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clos_1486 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clos_2550 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D Clos_2549 protein of unknown function DUF1078 domain protein K02392 flgG; flagellar basal-body rod protein FlgG D Clos_2548 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Clos_1488 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE D Clos_2521 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Clos_2520 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clos_2508 conserved hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D Clos_2479 flagellin domain protein K02406 fliC; flagellin D Clos_2518 flagellin domain protein K02406 fliC; flagellin D Clos_2490 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Clos_2489 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clos_2478 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Clos_1510 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Clos_1490 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Clos_1491 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Clos_2495 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Clos_2523 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Clos_2491 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Clos_1489 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D Clos_1502 GTP-binding signal recognition particle SRP54 G-domain K02404 flhF; flagellar biosynthesis protein FlhF D Clos_1503 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Clos_1637 twitching motility protein K02669 pilT; twitching motility protein PilT D Clos_1635 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Clos_1638 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Clos_1636 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Clos_1634 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clos_1631 Peptidoglycan-binding LysM K02664 pilO; type IV pilus assembly protein PilO D Clos_1632 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D Clos_1633 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Clos_1907 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins [BR:aoe03037] D Clos_1148 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:aoe04812] D Clos_2551 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clos_1765 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clos_1385 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clos_1761 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Clos_1760 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Clos_1759 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Clos_2868 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Clos_1924 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Clos_2867 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_2869 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clos_1923 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:aoe04147] D Clos_1676 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Clos_0973 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clos_0604 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0716 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0969 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clos_0970 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clos_0586 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clos_0296 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Clos_1045 band 7 protein K07192 FLOT; flotillin D Clos_2447 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clos_1233 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Clos_2034 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D Clos_0533 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clos_0476 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clos_0490 translation elongation factor Tu K02358 tuf; elongation factor Tu D Clos_1238 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clos_0258 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_2444 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Clos_0513 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Clos_1715 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clos_1002 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clos_2098 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clos_1329 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Clos_0143 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clos_0541 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clos_2147 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_1037 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_2376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clos_0638 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Clos_0170 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Clos_0971 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:aoe02048] D Clos_1062 conserved hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Clos_1897 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1855 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_2029 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Clos_1318 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Clos_1317 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Clos_2273 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Clos_2274 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Clos_1042 phage shock protein C, PspC K03973 pspC; phage shock protein C D Clos_1385 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Clos_2551 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clos_1765 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Clos_1848 hypothetical protein K19167 abiQ; protein AbiQ D Clos_1670 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clos_1814 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:aoe04090] C 01504 Antimicrobial resistance genes [BR:aoe01504] D Clos_0771 adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-] D Clos_0344 adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-] D Clos_2446 3''-adenylyltransferase K19279 ant9; aminoglycoside 9-adenylyltransferase [EC:2.7.7.-] D Clos_2851 rRNA (adenine-N(6)-)-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D Clos_0945 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Clos_1312 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-] D Clos_0764 Chloramphenicol O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Clos_0923 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Clos_0680 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clos_2861 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Clos_0839 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Clos_2860 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35] D Clos_2859 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aoe00537] D Clos_0143 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:aoe03100] D Clos_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0086 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0114 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clos_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0105 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clos_R0083 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0111 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0056 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0067 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clos_R0050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0108 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0078 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0092 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clos_R0061 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clos_R0046 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clos_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clos_R0104 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clos_R0040 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clos_R0052 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0080 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0064 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clos_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0089 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0106 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0074 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clos_R0021 tRNA-His K14226 tRNA-His; tRNA His D Clos_R0041 tRNA-His K14226 tRNA-His; tRNA His D Clos_R0096 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clos_R0073 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clos_R0070 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clos_R0055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0066 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0082 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clos_R0039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0103 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0088 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clos_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0094 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0099 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0054 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0065 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0081 tRNA-Met K14230 tRNA-Met; tRNA Met D Clos_R0034 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0072 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0095 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0062 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clos_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clos_R0097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clos_R0100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clos_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0102 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0101 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clos_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0077 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0091 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0107 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0028 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clos_R0098 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clos_R0044 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clos_R0090 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clos_R0076 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clos_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0093 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0079 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0109 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0063 tRNA-Val K14237 tRNA-Val; tRNA Val D Clos_R0033 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Clos_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0071 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0115 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0087 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clos_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0069 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0113 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clos_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0084 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0068 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0112 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clos_R0006 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Clos_R0032 RNA component of RNaseP K01978 rnpB; M1 RNA D Clos_R0027 tmRNA as predicted by Rfam (RF00023), score 181.58 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Clos_2544 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D Clos_2418 Shikimate/quinate 5-dehydrogenase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80] D Clos_0376 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Clos_0878 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Clos_1040 Indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Clos_0049 thiamine pyrophosphate protein domain protein TPP-binding K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Clos_0070 Indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Clos_1041 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Clos_0050 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Clos_0071 Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Clos_0391 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D Clos_1947 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Clos_2056 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Clos_0675 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Clos_2055 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Clos_0852 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Clos_0239 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2] D Clos_2090 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Clos_2250 ferredoxin K22338 hylA; formate dehydrogenase (NAD+, ferredoxin) subunit A [EC:1.17.1.11] D Clos_2251 NADH dehydrogenase (quinone) K22339 hylB; formate dehydrogenase (NAD+, ferredoxin) subunit B [EC:1.17.1.11] D Clos_2252 NADH dehydrogenase (ubiquinone) 24 kDa subunit K22340 hylC; formate dehydrogenase (NAD+, ferredoxin) subunit C [EC:1.17.1.11] D Clos_2249 formate dehydrogenase, alpha subunit K22341 fdhF2; formate dehydrogenase (NAD+, ferredoxin) subunit [EC:1.17.1.11] D Clos_1113 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Clos_2819 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Clos_0957 Glycine reductase K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Clos_0956 Sarcosine reductase K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2] D Clos_0958 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D Clos_0960 Glycine reductase K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Clos_0959 Sarcosine reductase K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Clos_1145 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Clos_2063 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clos_2687 glycyl-radical enzyme activating protein family K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clos_0963 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clos_2397 glycyl-radical enzyme activating protein family K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-] D Clos_1005 Tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D Clos_0411 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Clos_0352 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Clos_1698 conserved hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263] D Clos_2824 conserved hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263] D Clos_1697 Pyridoxal-5'-phosphate-dependent protein beta subunit K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263] D Clos_2823 Pyridoxal-5'-phosphate-dependent protein beta subunit K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263] D Clos_1368 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Clos_1057 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Clos_2104 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Clos_0889 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Clos_2545 type III effector Hrp-dependent outers K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D Clos_1440 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Clos_1257 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Clos_1985 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Clos_0616 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D Clos_1178 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D Clos_0458 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Clos_2417 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Clos_2383 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Clos_1795 putative anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Clos_0455 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Clos_0876 Formyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D Clos_2629 stage II sporulation protein E, protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Clos_1545 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Clos_0115 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Clos_1639 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Clos_2755 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Clos_2799 phosphoesterase RecJ domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Clos_1247 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Clos_2661 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Clos_2658 primase/topoisomerase like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D Clos_2439 glycoside hydrolase family 25 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_2547 Peptidoglycan-binding domain 1 protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clos_1211 formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clos_2348 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clos_1427 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clos_2018 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clos_2108 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clos_2346 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clos_2816 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clos_1160 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clos_1743 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Clos_2653 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clos_2574 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Clos_0775 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Clos_0743 Radical SAM domain protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D Clos_0760 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D Clos_2398 Formate C-acetyltransferase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4] D Clos_2688 pyruvate formate-lyase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4] D Clos_2148 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Clos_0297 ATP-grasp protein-like protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D Clos_2106 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Clos_1774 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Clos_1775 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Clos_1770 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Clos_2053 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clos_1087 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Clos_2048 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Clos_2162 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Clos_2708 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Clos_2122 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Clos_0569 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Clos_0871 FdrA family protein K02381 fdrA; FdrA protein D Clos_1773 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Clos_1772 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Clos_1771 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Clos_1669 nitrogen-fixing NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins D Clos_1950 flavodoxin/nitric oxide synthase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D Clos_0314 oxidoreductase/nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Clos_2219 flavodoxin K03839 fldA; flavodoxin I D Clos_0790 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH D Clos_0092 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Clos_0637 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Clos_2118 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Clos_1196 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Clos_0952 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Clos_0031 D-proline reductase (dithiol) K10795 prdD; D-proline reductase (dithiol)-stabilizing protein PrdD D Clos_0032 D-proline reductase (dithiol) K10796 prdE; D-proline reductase (dithiol)-stabilizing protein PrdE D Clos_0807 Ethanolamine utilisation protein EutH K04023 eutH; ethanolamine transporter D Clos_2217 Ethanolamine utilisation protein EutH K04023 eutH; ethanolamine transporter D Clos_2393 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ D Clos_0799 microcompartments protein K04026 eutL; ethanolamine utilization protein EutL D Clos_0792 ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP D Clos_2395 ethanolamine utilization protein K04029 eutP; ethanolamine utilization protein EutP D Clos_0808 Ethanolamine utilisation EutQ family protein K04030 eutQ; ethanolamine utilization protein EutQ D Clos_2389 Ethanolamine utilisation EutQ family protein K04030 eutQ; ethanolamine utilization protein EutQ D Clos_2396 microcompartments protein K04031 eutS; ethanolamine utilization protein EutS D Clos_0791 microcompartments protein K04031 eutS; ethanolamine utilization protein EutS D Clos_0795 microcompartments protein K04031 eutS; ethanolamine utilization protein EutS D Clos_1407 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Clos_1161 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D Clos_0211 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Clos_1104 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Clos_2655 AbgT putative transporter K12942 abgT; aminobenzoyl-glutamate transport protein D Clos_2391 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K27271 pduS; cobalamin reductase C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Clos_2005 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Clos_2176 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Clos_2477 RNA binding S1 domain protein K06959 tex; protein Tex D Clos_1422 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A D Clos_0005 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Clos_2631 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Clos_2371 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Clos_0454 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Clos_2175 trigger factor K03545 tig; trigger factor D Clos_0978 SsrA-binding protein K03664 smpB; SsrA-binding protein D Clos_0553 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Clos_1472 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Clos_0634 OsmC family protein K07397 yhfA; putative redox protein D Clos_2364 ResB protein required for cytochrome c biosynthesis-like protein K07399 resB; cytochrome c biogenesis protein D Clos_1965 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D Clos_2142 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor D Clos_1241 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Clos_1766 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Clos_1320 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Clos_1471 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Clos_0283 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Clos_1473 DNA protecting protein DprA K04096 smf; DNA processing protein D Clos_1688 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Clos_1294 zinc finger CHC2-family protein K06919 K06919; putative DNA primase/helicase D Clos_0151 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_2000 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_0594 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_1988 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_2233 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_0737 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_1894 transposase IS3/IS911 family protein K07483 K07483; transposase D Clos_2625 transposase mutator type K07493 K07493; putative transposase D Clos_1893 Integrase catalytic region K07497 K07497; putative transposase D Clos_2232 Integrase catalytic region K07497 K07497; putative transposase D Clos_1987 Integrase catalytic region K07497 K07497; putative transposase D Clos_2001 Integrase catalytic region K07497 K07497; putative transposase D Clos_0152 Integrase catalytic region K07497 K07497; putative transposase D Clos_0736 Integrase catalytic region K07497 K07497; putative transposase D Clos_0595 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Clos_2855 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Clos_2287 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Clos_0865 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Clos_1805 citrate/H+ symporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D Clos_2441 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Clos_2599 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Clos_2600 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Clos_1737 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Clos_0188 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Clos_2742 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Clos_0750 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Clos_2698 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Clos_0433 YidE/YbjL duplication K07085 K07085; putative transport protein D Clos_0622 YidE/YbjL duplication K07085 K07085; putative transport protein C 99978 Cell growth D Clos_2425 protein of unknown function DUF542 ScdA domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D Clos_2802 sigmaK-factor processing regulatory BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Clos_0900 spore coat peptide assembly protein cotJB K06333 cotJB; spore coat protein JB D Clos_0899 manganese containing catalase K06334 cotJC; spore coat protein JC D Clos_2873 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Clos_2203 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Clos_2665 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Clos_2202 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Clos_2664 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Clos_1796 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Clos_1594 Sporulation stage II protein M K06384 spoIIM; stage II sporulation protein M D Clos_1227 Stage II sporulation P family protein K06385 spoIIP; stage II sporulation protein P D Clos_1395 Stage II sporulation P family protein K06385 spoIIP; stage II sporulation protein P D Clos_0291 Sporulation stage II protein R K06387 spoIIR; stage II sporulation protein R D Clos_1622 Sporulation stage III protein AA K06390 spoIIIAA; stage III sporulation protein AA D Clos_1621 Sporulation stage III protein AB K06391 spoIIIAB; stage III sporulation protein AB D Clos_1620 Stage III sporulation AC family protein K06392 spoIIIAC; stage III sporulation protein AC D Clos_1619 Sporulation stage III protein AD K06393 spoIIIAD; stage III sporulation protein AD D Clos_1618 Sporulation stage III protein AE K06394 spoIIIAE; stage III sporulation protein AE D Clos_1617 Sporulation stage III protein AF K06395 spoIIIAF; stage III sporulation protein AF D Clos_1616 Sporulation stage III protein AG K06396 spoIIIAG; stage III sporulation protein AG D Clos_1615 putative stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH D Clos_1402 Sporulation stage IV protein A K06398 spoIVA; stage IV sporulation protein A D Clos_1845 Recombinase K06400 spoIVCA; site-specific DNA recombinase D Clos_1652 Recombinase K06400 spoIVCA; site-specific DNA recombinase D Clos_1793 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA D Clos_1792 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB D Clos_1791 Sporulation stage V protein AC K06405 spoVAC; stage V sporulation protein AC D Clos_1790 Stage V sporulation AD family protein K06406 spoVAD; stage V sporulation protein AD D Clos_1789 Sporulation stage V protein AE K06407 spoVAE; stage V sporulation protein AE D Clos_2647 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Clos_1544 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Clos_2513 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D Clos_2076 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Clos_2025 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clos_2062 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Clos_2007 hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Clos_1245 putative stage IV sporulation YqfD K06438 yqfD; similar to stage IV sporulation protein D Clos_2718 GerA spore germination protein K06295 gerKA; spore germination protein KA D Clos_2312 GerA spore germination protein K06295 gerKA; spore germination protein KA D Clos_2313 spore germination B3 GerAC family protein K06297 gerKC; spore germination protein KC D Clos_2719 spore germination B3 GerAC family protein K06297 gerKC; spore germination protein KC D Clos_0556 conserved hypothetical protein K06298 gerM; germination protein M D Clos_0288 GerA spore germination protein K06310 yndD; spore germination protein D Clos_2071 Spore germination YpeB K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Clos_0699 stress protein K05795 terD; tellurium resistance protein TerD D Clos_0702 stress protein K05795 terD; tellurium resistance protein TerD D Clos_1837 GTP-binding protein TypA K06207 typA; GTP-binding protein D Clos_1246 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Clos_2804 PhoH family protein K07175 phoH2; PhoH-like ATPase D Clos_1967 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Clos_2617 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Clos_2615 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Clos_0140 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Clos_1269 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein D Clos_2390 microcompartments protein K27272 pduT; bacterial microcompartment shell protein C 99994 Others D Clos_0270 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Clos_1120 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Clos_2805 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Clos_0406 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Clos_1213 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Clos_1175 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Clos_0602 DNA binding domain, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein B B 09194 Poorly characterized C 99996 General function prediction only D Clos_0301 PHP domain protein K04477 ycdX; putative hydrolase D Clos_1857 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Clos_0620 export-related chaperone CsaA K06878 K06878; tRNA-binding protein D Clos_0627 Patatin K07001 K07001; NTE family protein D Clos_2117 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D Clos_1810 membrane protein of unknown function K08972 K08972; putative membrane protein D Clos_2588 protein of unknown function DUF368 K08974 K08974; putative membrane protein D Clos_2734 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Clos_1718 Radical SAM domain protein K06871 K06871; uncharacterized protein D Clos_0336 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Clos_1782 CoA-binding domain protein K06929 K06929; uncharacterized protein D Clos_0305 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Clos_0824 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D Clos_1465 RNA-binding protein (contains KH domain)-like protein K06960 K06960; uncharacterized protein D Clos_0474 protein of unknown function DUF901 K06962 K06962; uncharacterized protein D Clos_1430 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein D Clos_2059 GCN5-related N-acetyltransferase K06976 K06976; uncharacterized protein D Clos_2058 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07005 K07005; uncharacterized protein D Clos_2849 nitroimidazole resistance protein, putative K07005 K07005; uncharacterized protein D Clos_0770 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07005 K07005; uncharacterized protein D Clos_0012 phosphotransferase system, EIIC K07035 K07035; uncharacterized protein D Clos_1890 conserved hypothetical cytosolic protein K07074 K07074; uncharacterized protein D Clos_1215 aldo/keto reductase K07079 K07079; uncharacterized protein D Clos_0676 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Clos_1123 permease K07089 K07089; uncharacterized protein D Clos_2818 permease K07089 K07089; uncharacterized protein D Clos_1780 permease K07090 K07090; uncharacterized protein D Clos_1781 conserved hypothetical protein K07090 K07090; uncharacterized protein D Clos_0559 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Clos_0823 metallophosphoesterase K07098 K07098; uncharacterized protein D Clos_0415 metallophosphoesterase K07098 K07098; uncharacterized protein D Clos_0718 metallophosphoesterase K07099 K07099; uncharacterized protein D Clos_0011 3H domain protein K07105 K07105; uncharacterized protein D Clos_1963 conserved hypothetical protein K07112 K07112; uncharacterized protein D Clos_1029 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Clos_1027 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Clos_0603 conserved hypothetical membrane-spanning protein K07120 K07120; uncharacterized protein D Clos_1838 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Clos_0715 conserved hypothetical radical SAM protein K07139 K07139; uncharacterized protein D Clos_2369 protein of unknown function DUF405 K07148 K07148; uncharacterized protein D Clos_0051 uncharacterized membrane protein K07149 K07149; uncharacterized protein D Clos_0679 protein of unknown function DUF161 K07149 K07149; uncharacterized protein D Clos_2449 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Clos_2875 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Clos_1896 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein D Clos_1240 putative tRNA binding protein K09117 K09117; uncharacterized protein D Clos_2200 protein of unknown function DUF438 K09155 K09155; uncharacterized protein D Clos_0074 putative PAS/PAC sensor protein K09155 K09155; uncharacterized protein D Clos_1429 protein of unknown function DUF116 K09729 K09729; uncharacterized protein D Clos_1511 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Clos_0913 conserved hypothetical protein K09766 K09766; uncharacterized protein D Clos_2709 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Clos_2482 protein of unknown function DUF327 K09770 K09770; uncharacterized protein D Clos_1608 acid phosphatase/vanadium-dependent haloperoxidase related K09775 K09775; uncharacterized protein D Clos_0776 protein of unknown function DUF378 K09779 K09779; uncharacterized protein D Clos_0017 YCII-related K09780 K09780; uncharacterized protein D Clos_1462 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Clos_2724 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Clos_2114 RNA binding S1 domain protein K00243 K00243; uncharacterized protein D Clos_1861 hypothetical protein K09968 K09968; uncharacterized protein D Clos_0271 conserved hypothetical protein K05967 K05967; uncharacterized protein D Clos_1819 exonuclease-like protein K07502 yprB; uncharacterized protein D Clos_1752 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Clos_1526 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024