+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Brucella abortus A13334
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D BAA13334_I02903 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C BAA13334_I02902 GTP-binding protein Era K03595 era; GTPase
C BAA13334_I01032 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C BAA13334_I02320 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
C BAA13334_I00518 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C BAA13334_I02737 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C BAA13334_I01984 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D BAA13334_I02875 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BAA13334_I01085 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BAA13334_II01543 fmu domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BAA13334_I00501 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D BAA13334_II00535 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BAA13334_II00976 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BAA13334_I00700 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BAA13334_I01671 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BAA13334_I00187 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BAA13334_I03229 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D BAA13334_I01980 TrmH family RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BAA13334_II01106 23S ribsomal RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BAA13334_I01038 SPOUT methyltransferase superfamily protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BAA13334_I00226 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BAA13334_I02836 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D BAA13334_I00351 cfr family radical SAM enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BAA13334_I03229 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BAA13334_I03227 TrmA family RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BAA13334_II00533 RNA-binding S4 domain-containing protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BAA13334_I02381 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BAA13334_I01343 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C BAA13334_I00539 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C BAA13334_I03155 Gcn5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C BAA13334_I00929 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C BAA13334_II01290 elongator protein 3 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C BAA13334_I01712 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C BAA13334_I02903 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C BAA13334_I02512 ribonuclease Rne/Rng domain-containing protein K08300 rne; ribonuclease E [EC:3.1.26.12]
C BAA13334_II01228 putative endonuclease involved in recombination K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
C BAA13334_I00267 DEAD/DEAH box helicase domain-containing protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C BAA13334_I02902 GTP-binding protein Era K03595 era; GTPase
C BAA13334_I03323 ribosome-associated GTPase EngA K03977 engA; GTPase
C BAA13334_I01032 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C BAA13334_I02197 GTP-binding proten HflX K03665 hflX; GTPase
B Other maturation factors
C BAA13334_I03276 translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C BAA13334_I02917 GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BAA13334_I00510 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C BAA13334_I00519 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C BAA13334_I01037 hypothetical protein K09710 ybeB; ribosome-associated protein
C BAA13334_I00531 putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
C BAA13334_I00212 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
C BAA13334_I01516 putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024