+E Transcription factors KO
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Transcription Factors - Bacillus cereus ATCC 14579
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D BC0941 Type II restriction-modification system methylation subunit K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D BC3033 Transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D BC4832 Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D BC2632 Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D BC1115 Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D BC3740 ADA regulatory protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
C LysR family
D BC5175 Transcriptional regulators, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D BC3720 Fructose repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D BC5282 Stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D BC4294 CBS domain containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D BC0659 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BC4672 Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BC0776 Sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D BC0630 Trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D BC4053 Transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D BC3792 Transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D BC1302 Transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BC2068 Transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BC0583 Transcriptional regulator, GntR family / aminotransferase class I K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BC2680 Transcriptional regulator, GntR family K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC
D BC4076 Acetoin transport repressor K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D BC4525 Transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D BC2936 Transcriptional repressor Bm3R1 K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
C Lrp/AsnC family
D BC1363 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D BC4501 Germination protein gerE K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
C MarR family
D BC1047 Protease production regulatory protein hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D BC1337 Transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D BC3128 Transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D BC4474 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D BC3706 Transcriptional regulator, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D BC3356 Transcriptional regulator, MerR family K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D BC1489 Transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D BC5373 Transcriptional regulator, MerR family K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D BC4091 Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BC4277 Zinc-specific metalloregulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D BC0518 Peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D BC0410 Transcription regulator, Crp family K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
C Rrf2 family
D BC4393 RRF2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D BC3155 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D BC0595 Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D BC4834 Transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
D BC1282 SinR protein K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation
C PadR family
D BC4206 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D BC4029 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D BC3693 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D BC3438 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D BC1037 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
C Other families
D BC4204 Manganese transport transcription regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D BC1075 Beta-lactamase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BC1537 Biotin operon repressor / Biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BC0598 Transcriptional activator NprR K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D BC0601 Transcriptional activator NprR K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D BC5350 Transcriptional activator plcR K20391 plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
D BC1673 Transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D BC0958 Transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D BC0051 Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D BC2766 Sigma-54-dependent transcriptional activator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BC1298 Carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D BC0473 Arginine utilization regulatory protein rocR K06714 rocR; arginine utilization regulatory protein
D BC2250 L-lysine aminomutase regulator K06714 rocR; arginine utilization regulatory protein
D BC0291 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor
D BC3826 Transcription pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor
D BC2181 Transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator
D BC2988 Transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator
D BC1253 Transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
D BC0690 Transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
D BC0435 Transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
D BC5024 Transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
D BC5173 Transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D BC0265 hypothetical Cytosolic Protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D BC4051 Transcription antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D BC0806 Transcription antiterminator, BglG family K03491 licR; probable licABCH operon transcriptional regulator
C Others
D BC3732 hypothetical Cytosolic Protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BC0042 Transcription state regulatory protein abrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D BC0059 Stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D BC5481 Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BC5483 Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BC3648 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BC4714 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BC0566 Glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D BC1033 Glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D BC0405 Arginine repressor, argR K03402 argR; transcriptional regulator of arginine metabolism
D BC4174 Arginine repressor, argR K03402 argR; transcriptional regulator of arginine metabolism
D BC4314 Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D BC2551 Transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D BC0742 Transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D BC0746 Regulatory protein TENI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D BC0099 Transcriptional regulator ctsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D BC5141 Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D BC1819 Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D BC2964 Deoxyribonucleoside regulator K11531 lsrR; lsr operon transcriptional repressor
D BC3891 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D BC5385 Prespore specific transcriptional activator rsfA K06314 rsfA; prespore-specific regulator
D BC4581 putative regulatory protein K07738 nrdR; transcriptional repressor NrdR
D BC3653 Hut operon positive regulatory protein K09683 hutP; hut operon positive regulatory protein
D BC1134 Competence transcription factor K02250 comK; competence protein ComK
D BC5250 Competence transcription factor K02250 comK; competence protein ComK
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0