+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Bradyrhizobium diazoefficiens USDA 110</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
C    Subtype I-A factors
D      blr8088 blr8088; ORF_ID:blr8088; hypothetical protein	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-B factors
D      blr8088 blr8088; ORF_ID:blr8088; hypothetical protein	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-C factors
D      blr8088 blr8088; ORF_ID:blr8088; hypothetical protein	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-D factors
D      blr8088 blr8088; ORF_ID:blr8088; hypothetical protein	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
D      blr8088 blr8088; ORF_ID:blr8088; hypothetical protein	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] 
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    bll5012 bll5012; ORF_ID:bll5012; putative type I restriction enzyme	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] 
C    bll5013 bll5013; ORF_ID:bll5013; unknown protein	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] 
C    bll5014 bll5014; type I restriction-modification system specificity subunit	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      bll2509 gst; adenine DNA methyltransferase	K13581 ccrM; modification methylase [EC:2.1.1.72] 
B  Type III R-M system
B  Type IV R-M system
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
D      bll1687 bll1687; ORF_ID:bll1687; hypothetical protein	K19155 yhaV; toxin YhaV [EC:3.1.-.-] 
D      bll1688 bll1688; ORF_ID:bll1688; probable suppressor protein	K19156 prlF; antitoxin PrlF 
C    RelE/StbE-RelB/StbD
C    YafQ-dinJ
C    YoeB-YefM
C    HipA-HipB
D      bll1985 hipA; HipA protein	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] 
D      bsl1986 bsl1986; ORF_ID:bsl1986; probable transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB 
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
C    PspC-PspB
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
D      bsl3012 bsl3012; ORF_ID:bsl3012; hypothetical protein	K07334 higB-1; toxin HigB-1 
D      bll3011 bll3011; virulence-associated protein I	K21498 higA-1; antitoxin HigA-1 
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
D      bll2434 bll2434; plasmid stability protein	K07062 fitB; toxin FitB [EC:3.1.-.-] 
C    BC_0920-BC_0921
C    Type II TA system related factors
D      bll6596 ftsZ; cell division protein	K03531 ftsZ; cell division protein FtsZ 
D      blr0166 ftsZ; cell division protein	K03531 ftsZ; cell division protein FtsZ 
D      bll5057 gyrA; topoisomerase II	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      bll4355 gyrB; DNA gyrase subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
D      blr4838 gltX; glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
D      bsl4602 bsl4602; ORF_ID:bsl4602; hypothetical protein	K09159 cptB; antitoxin CptB 
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    blr1756 nifS; nitrogenase metalloclusters biosynthesis protein	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    blr4338 nifS; cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023