+E Replication protein KO
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DNA Replication Proteins - Bradyrhizobium diazoefficiens USDA 110
%
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D blr1316 blr1316; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D bsr4925 hup; ORF_ID:bsr4925; probable DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D bsl8312 hupT; HNS-type DNA binding protein K03530 hupB; DNA-binding protein HU-beta
D bll5019 ihfA; integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D blr0742 ihfB; integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D bll0830 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D bll4071 alr; alanine racemase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D bll7350 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D bll4698 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E bll4866 dnaE; DNA polymerase III alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E bll0829 dnaN; DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E blr4109 blr4109; ORF_ID:blr4109; hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E blr0629 blr0629; ORF_ID:blr0629; hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E bll4517 bll4517; ORF_ID:bll4517; probable DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E blr0640 dnaQ; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E blr4117 blr4117; ORF_ID:blr4117; putative nuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E blr8018 blr8018; ORF_ID:blr8018; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E bll8083 bll8083; ORF_ID:bll8083; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E bll8116 bll8116; DNA polymerase III tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E blr1316 blr1316; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E blr2521 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E blr8131 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E bll6591 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E blr1316 blr1316; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E blr2521 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C bll4696 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C bll0823 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C bll5057 gyrA; topoisomerase II K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C bll4355 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C blr5111 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C bll0572 bll0572; ORF_ID:bll0572; putative DNA topoisomerase I (EC 5.99.1.2) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022