+D GENES KO
#
KEGG Orthology (KO) - Borrelia recurrentis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bre00010]
D BRE_736 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_25 pfpB; pyrophosphate--fructose 6-phosphate 1-phosphotransferase,beta subunit K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D BRE_446 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BRE_58 tpi; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BRE_60 gap; glyceraldehyde 3-phosphate dehydrogenase (GAPDH) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BRE_59 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BRE_664 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BRE_340 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BRE_351 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BRE_89 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BRE_564 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BRE_651 ptsG; PTS system, glucose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_6010 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway [PATH:bre00030]
D BRE_736 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BRE_643 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BRE_222 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D BRE_566 gnd; phosphogluconate dehydrogenase, decarboxylating (gnd) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BRE_663 rpi; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BRE_549 prs; phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BRE_446 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_25 pfpB; pyrophosphate--fructose 6-phosphate 1-phosphotransferase,beta subunit K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions
D BRE_206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_8 uncharacterized conserved protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:bre00051]
D BRE_405 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BRE_846 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_25 pfpB; pyrophosphate--fructose 6-phosphate 1-phosphotransferase,beta subunit K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D BRE_637 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D BRE_446 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BRE_58 tpi; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BRE_406 fruA-1; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BRE_636 fruA-2; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:bre00052]
D BRE_206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_8 uncharacterized conserved protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D BRE_445 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:bre00500]
D BRE_206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_8 uncharacterized conserved protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_564 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BRE_651 ptsG; PTS system, glucose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_6010 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BRE_736 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bre00520]
D BRE_626 beta-glucosidase, putative K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BRE_7 beta-N-acetylhexosaminidase, putative K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BRE_564 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BRE_836 nagE; Sugar Specific PTS family, n-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BRE_151 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BRE_152 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D BRE_479 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BRE_602 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BRE_650 N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D BRE_651 ptsG; PTS system, glucose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_6010 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BRE_206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_8 uncharacterized conserved protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_445 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D BRE_736 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BRE_405 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BRE_846 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:bre00620]
D BRE_629 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BRE_593 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BRE_351 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BRE_6011 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D BRE_89 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bre00630]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_682 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D BRE_605 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism [PATH:bre00640]
D BRE_629 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BRE_593 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BRE_89 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:bre00650]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_689 3-hydroxy-3-methylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D BRE_58 tpi; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bre00190]
D BRE_96 atpA; V-type ATPase, subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D BRE_95 atpB; V-type ATPase, subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D BRE_94 atpD; V-type ATPase, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D BRE_98 atpE; V-type ATPase, subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D BRE_93 atpI; V-type ATPase, subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D BRE_92 atpK; V-type ATPase, subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bre00710]
D BRE_59 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BRE_60 gap; glyceraldehyde 3-phosphate dehydrogenase (GAPDH) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BRE_446 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BRE_663 rpi; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BRE_58 tpi; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00720 Other carbon fixation pathways [PATH:bre00720]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_30 folD; methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BRE_593 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BRE_629 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:bre00680]
D BRE_605 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BRE_340 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BRE_446 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_629 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BRE_593 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BRE_664 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
D BRE_625 uncharacterized conserved protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bre00061]
D BRE_709 acyl carrier protein K02078 acpP; acyl carrier protein
D BRE_597 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_140 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bre00071]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_597 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_140 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bre00561]
D BRE_332 glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BRE_41 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BRE_456 lipopolysaccharide biosynthesis-related protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:bre00564]
D BRE_367 gpsA; glycerol-3-phosphate dehydrogenase, NAD(P) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BRE_332 glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BRE_41 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BRE_242 glpQ; glycerophosphoryl diester phosphodiesterase, periplasmic precursor (glycerophosphodiester phosphodiesterase); lipoprotein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BRE_121 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BRE_249 Phosphatidylserine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D BRE_727 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bre00230]
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BRE_549 prs; phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BRE_424 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BRE_785 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BRE_474 uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BRE_422 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D BRE_1109 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BRE_469 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BRE_247 rdgB/HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D BRE_1108 guaA; GMP synthase (glutamine-hydrolysing) (glutamine amidotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BRE_1046 nrdE; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BRE_1045 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BRE_195 spoT; guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BRE_729 adenylyl cyclase, CyaB-type, putative K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D BRE_423 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BRE_238 dck; deoxyguanosine/deoxyadenosine kinase(I) subunit 2 K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D BRE_511 uncharacterized conserved protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D BRE_415 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:bre00240]
D BRE_578 smbA; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BRE_469 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BRE_126 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D BRE_582 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BRE_131 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BRE_829 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BRE_20 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BRE_511 uncharacterized conserved protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D BRE_624 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D BRE_1046 nrdE; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BRE_1045 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BRE_238 dck; deoxyguanosine/deoxyadenosine kinase(I) subunit 2 K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D BRE_803 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BRE_801 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D BRE_1048 thymidylate synthase protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D BRE_3005 thy1; thymidylate synthase-complementing protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bre00250]
D BRE_423 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BRE_424 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:bre00260]
D BRE_605 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BRE_664 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00270 Cysteine and methionine metabolism [PATH:bre00270]
D BRE_375 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BRE_374 pfs-1; 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BRE_474 uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BRE_376 autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D BRE_89 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:bre00280]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_689 3-hydroxy-3-methylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:bre00300]
D BRE_576 uncharacterized conserved protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BRE_198 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BRE_311 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:bre00220]
D BRE_853 arcB; ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D BRE_852 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:bre00430]
D BRE_593 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BRE_629 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D BRE_533 phnP; phnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:bre00450]
D BRE_86 nifS; nifS protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BRE_520 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BRE_592 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D BRE_605 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bre00470]
D BRE_158 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BRE_197 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BRE_102 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BRE_590 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:bre00480]
D BRE_611 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BRE_566 gnd; phosphogluconate dehydrogenase, decarboxylating (gnd) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BRE_643 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bre00541]
D BRE_206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_8 uncharacterized conserved protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BRE_445 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D BRE_405 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BRE_846 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00550 Peptidoglycan biosynthesis [PATH:bre00550]
D BRE_479 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BRE_602 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BRE_827 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BRE_590 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BRE_198 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BRE_197 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BRE_311 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BRE_122 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BRE_265 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BRE_310 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BRE_774 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BRE_738 pbp-3; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BRE_724 pbp-2; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BRE_139 pbp-1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BRE_609 dacA; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BRE_588 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:bre00552]
D BRE_265 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BRE_456 lipopolysaccharide biosynthesis-related protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bre00730]
D BRE_101 uncharacterized conserved protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BRE_415 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism [PATH:bre00750]
D BRE_775 pdxK; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bre00760]
D BRE_642 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D BRE_790 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BRE_525 NH(3)-dependent NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D BRE_1105 pncA; pyrazinamidase/nicotinamidase (pncA) K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D BRE_318 probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bre00770]
D BRE_529 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D BRE_823 dfp; pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BRE_707 kdtB; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BRE_552 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BRE_15 holo-acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate [PATH:bre00670]
D BRE_30 folD; methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BRE_605 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BRE_67 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BRE_1048 thymidylate synthase protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D BRE_3005 thy1; thymidylate synthase-complementing protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D BRE_371 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bre00900]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_689 3-hydroxy-3-methylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D BRE_691 mvaA; 3-hydroxy-3-methylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D BRE_694 mvaK; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D BRE_693 phosphomevalonate kinase, putative K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D BRE_692 mvaD; mevalonate pyrophosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D BRE_690 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D BRE_122 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D BRE_9 femD; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BRE_709 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D BRE_375 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D BRE_6011 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bre03020]
D BRE_387 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BRE_386 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BRE_508 rpoA; DNA-directed RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bre03010]
D BRE_130 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BRE_125 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BRE_490 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BRE_620 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BRE_501 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BRE_117 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BRE_384 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BRE_498 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BRE_341 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BRE_483 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BRE_507 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BRE_385 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BRE_506 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BRE_497 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BRE_815 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BRE_701 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BRE_493 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BRE_115 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BRE_488 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BRE_232 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BRE_258 rpsU_1; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BRE_263 rpsU_2; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BRE_390 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BRE_487 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BRE_484 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BRE_485 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BRE_496 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BRE_499 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BRE_388 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BRE_114 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BRE_389 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BRE_391 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BRE_342 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BRE_494 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BRE_503 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BRE_491 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BRE_509 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BRE_500 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BRE_705 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BRE_186 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BRE_786 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BRE_489 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BRE_486 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BRE_495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BRE_795 ctc; 50S ribosomal protein L25, general stress protein K02897 RP-L25; large subunit ribosomal protein L25
D BRE_788 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BRE_352 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BRE_492 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BRE_502 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BRE_228 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BRE_708 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BRE_395 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BRE_441 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BRE_187 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BRE_505 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BRE_428 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BRE_420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BRE_419 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bre00970]
D BRE_427 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BRE_464 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BRE_613 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BRE_752 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BRE_633 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BRE_638 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BRE_199 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BRE_794 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BRE_538 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BRE_51 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BRE_615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BRE_612 tRNA-His K14226 tRNA-His; tRNA His
D BRE_426 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BRE_766 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_577 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_251 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_614 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_539 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BRE_540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BRE_212 tRNA-Met K14230 tRNA-Met; tRNA Met
D BRE_621 tRNA-Met K14230 tRNA-Met; tRNA Met
D BRE_627 tRNA-Met K14230 tRNA-Met; tRNA Met
D BRE_203 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BRE_751 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BRE_461 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BRE_462 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BRE_465 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BRE_396 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BRE_714 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BRE_394 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BRE_715 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BRE_695 tRNA-Val K14237 tRNA-Val; tRNA Val
D BRE_371 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BRE_345 gatA; glu-tRNA amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BRE_344 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BRE_346 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BRE_220 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BRE_448 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BRE_103 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BRE_370 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BRE_726 thrZ; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BRE_225 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BRE_603 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BRE_592 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BRE_67 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BRE_745 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BRE_252 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BRE_844 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BRE_665 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BRE_598 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BRE_402 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BRE_138 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BRE_518 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BRE_519 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BRE_369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BRE_10 trsA; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bre03060]
D BRE_504 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BRE_393 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BRE_57 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D BRE_658 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D BRE_659 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D BRE_657 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BRE_443 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BRE_154 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BRE_700 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BRE_79 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D BRE_34 lepB-1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BRE_35 lepB-2; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BRE_270 lepB-3; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BRE_476 lsp; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D BRE_688 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bre03018]
D BRE_340 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BRE_816 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BRE_229 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D BRE_510 uncharacterized conserved protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_523 dnaK-2; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_271 dnaK-1; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_655 groEL; heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bre03030]
D BRE_585 dnaE; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BRE_466 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_772 DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_457 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BRE_438 dnaN; DNA polymerase III, subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BRE_113 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BRE_717 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BRE_116 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BRE_49 rnhB; ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BRE_553 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BRE_557 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bre03410]
D BRE_753 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BRE_56 ung; uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BRE_425 mag; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D BRE_18 uncharacterized conserved protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D BRE_534 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BRE_553 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BRE_256 recJ1; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BRE_557 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bre03420]
D BRE_630 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BRE_848 uvrA; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D BRE_847 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D BRE_458 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D BRE_347 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BRE_553 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BRE_557 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bre03430]
D BRE_808 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D BRE_210 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D BRE_347 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BRE_256 recJ1; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BRE_116 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BRE_585 dnaE; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BRE_438 dnaN; DNA polymerase III, subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BRE_466 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_772 DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_457 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BRE_557 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BRE_470 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:bre03440]
D BRE_256 recJ1; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BRE_116 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BRE_439 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BRE_468 recR; recombination protein RecR K06187 recR; recombination protein RecR
D BRE_553 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BRE_28 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D BRE_27 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BRE_587 recG; DNA recombinase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BRE_640 recB; exodeoxyribonuclease V, beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BRE_641 recC; exodeoxyribonuclease V, gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BRE_639 recD; exodeoxyribonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BRE_585 dnaE; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BRE_438 dnaN; DNA polymerase III, subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BRE_466 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_772 DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_457 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BRE_19 priA; primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:bre03250]
D BRE_411 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bre02010]
D BRE_645 potD; spermidine/putrescine ABC transporter, binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BRE_646 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D BRE_647 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D BRE_648 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BRE_146 proX; glycine betaine/L-proline transport system substrate-binding protein; lipoprotein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BRE_147 proW; glycine betaine/L-proline transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D BRE_148 proV; glycine betaine/L-proline transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BRE_383 bmpD; basic membrane protein D K07335 bmpA; basic membrane protein A and related proteins
D BRE_380 bmpA-1; basic membrane protein A K07335 bmpA; basic membrane protein A and related proteins
D BRE_382 bmpA-2; basic membrane protein A; lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D BRE_381 bmpC; basic membrane protein C; lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D BRE_684 rbsC-1; ribose/galactose ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D BRE_685 rbsC-2; ribose/galactose ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D BRE_683 mglA; ribose/galactose ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D BRE_215 pstS; phosphate ABC transporter, periplasmic phosphate-binding K02040 pstS; phosphate transport system substrate-binding protein
D BRE_216 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D BRE_217 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D BRE_218 pstB; phosphate transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BRE_334 oppA-2; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BRE_335 oppB-1; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D BRE_336 oppC-1; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D BRE_337 oppD; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D BRE_338 oppF; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BRE_81 lipoprotein releasing system, permease protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein
D BRE_83 ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BRE_82 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BRE_818 conserved hypothetical integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D BRE_819 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D BRE_473 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
C 02060 Phosphotransferase system (PTS) [PATH:bre02060]
D BRE_563 ptsI; phosphoenolpyruvate-protein phosphatase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BRE_562 ptsH-2; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BRE_450 ptsH-1; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BRE_564 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BRE_836 nagE; Sugar Specific PTS family, n-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BRE_651 ptsG; PTS system, glucose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_6010 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_406 fruA-1; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BRE_636 fruA-2; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BRE_637 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:bre03070]
D BRE_658 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D BRE_659 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D BRE_393 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BRE_57 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D BRE_504 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BRE_657 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BRE_443 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BRE_154 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BRE_79 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D BRE_700 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bre02020]
D BRE_215 pstS; phosphate ABC transporter, periplasmic phosphate-binding K02040 pstS; phosphate transport system substrate-binding protein
D BRE_800 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D BRE_149 flaB; flagellar filament 41 kDa core protein K02406 fliC; flagellin
D BRE_288 motA; flagellar motor rotation protein A K02556 motA; chemotaxis protein MotA
D BRE_437 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D BRE_588 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BRE_771 sensory transduction histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D BRE_182 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_401 glutamate transporter, putative K11103 dctA; aerobic C4-dicarboxylate transport protein
D BRE_452 ntrA; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D BRE_44 cheR-1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BRE_412 cheR-2; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BRE_584 mcp-1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_600 mcp-2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_601 mcp-3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_686 mcp-4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_687 mcp-5; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_319 cheW-1; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_676 cheW-3; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_570 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_675 cheA-2; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_572 cheA-1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_678 cheY3; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_575 cheY-2; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_556 cheY-1; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_573 cheB-2; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_413 cheB-1; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_418 sensory transduction histidine kinase K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
D BRE_417 rrp-1; response regulatory protein K18444 rrp1; two-component system, glycerol uptake and utilization response regulator
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bre02024]
D BRE_376 autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D BRE_597 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_140 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_334 oppA-2; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BRE_335 oppB-1; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D BRE_336 oppC-1; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D BRE_337 oppD; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D BRE_338 oppF; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BRE_755 oppB-2; oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BRE_754 oppC-2; oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BRE_443 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BRE_393 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BRE_57 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D BRE_504 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BRE_657 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BRE_154 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BRE_79 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D BRE_700 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bre02030]
D BRE_584 mcp-1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_600 mcp-2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_601 mcp-3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_686 mcp-4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_687 mcp-5; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_675 cheA-2; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_572 cheA-1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_319 cheW-1; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_676 cheW-3; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_570 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_678 cheY3; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_575 cheY-2; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_556 cheY-1; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_677 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D BRE_573 cheB-2; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_413 cheB-1; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_610 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D BRE_44 cheR-1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BRE_412 cheR-2; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BRE_297 fliG-2; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BRE_221 fliG-1; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BRE_285 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D BRE_284 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D BRE_288 motA; flagellar motor rotation protein A K02556 motA; chemotaxis protein MotA
D BRE_287 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bre02040]
D BRE_299 fliE; flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D BRE_298 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D BRE_297 fliG-2; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BRE_221 fliG-1; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BRE_296 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D BRE_295 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BRE_286 fliL; flagellar protein K02415 fliL; flagellar protein FliL
D BRE_285 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D BRE_284 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D BRE_283 fliZ; flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D BRE_282 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D BRE_281 fliQ; flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D BRE_280 fliR; flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D BRE_278 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D BRE_279 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D BRE_301 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D BRE_300 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D BRE_291 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D BRE_290 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D BRE_783 flhO; flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D BRE_782 flgG; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D BRE_780 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D BRE_779 flgJ; flagellum-specific muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D BRE_179 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D BRE_180 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D BRE_149 flaB; flagellar filament 41 kDa core protein K02406 fliC; flagellin
D BRE_150 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D BRE_555 flaJ; flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D BRE_288 motA; flagellar motor rotation protein A K02556 motA; chemotaxis protein MotA
D BRE_287 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
D BRE_718 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D BRE_452 ntrA; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BRE_340 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bre01501]
D BRE_626 beta-glucosidase, putative K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BRE_7 beta-N-acetylhexosaminidase, putative K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BRE_334 oppA-2; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BRE_335 oppB-1; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D BRE_336 oppC-1; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D BRE_337 oppD; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D BRE_338 oppF; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BRE_738 pbp-3; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BRE_724 pbp-2; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BRE_139 pbp-1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bre01502]
D BRE_197 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BRE_158 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BRE_311 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BRE_310 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BRE_774 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BRE_588 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bre01503]
D BRE_672 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BRE_800 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D BRE_411 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bre01000]
C 01001 Protein kinases [BR:bre01001]
D BRE_66 uncharacterized conserved protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BRE_771 sensory transduction histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D BRE_675 cheA-2; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_572 cheA-1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_418 sensory transduction histidine kinase K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bre01009]
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_565 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:bre01002]
D BRE_476 lsp; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BRE_1108 guaA; GMP synthase (glutamine-hydrolysing) (glutamine amidotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BRE_628 thiJ; 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D BRE_596 uncharacterized conserved protein K07052 K07052; CAAX protease family protein
D BRE_248 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D BRE_588 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BRE_227 Zn-dependent peptidase, insulinase-like protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D BRE_536 zinc protease; lipoprotein K07263 pqqL; zinc protease [EC:3.4.24.-]
D BRE_576 uncharacterized conserved protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BRE_611 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BRE_107 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BRE_70 peptidase, putative K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BRE_72 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D BRE_798 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BRE_120 zinc protease, putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BRE_800 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D BRE_609 dacA; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BRE_617 clpP-1; ATP-dependent Clp protease proteolytic component K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BRE_764 clpP-2; ATP-dependent Clp protease proteolytic component K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BRE_619 lon-2; ATP-dependent protease LA K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BRE_254 lon-1; ATP-dependent protease LA K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BRE_34 lepB-1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BRE_35 lepB-2; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BRE_270 lepB-3; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BRE_360 ctp; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BRE_303 hslV; heat shock protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D BRE_202 hflC; Lambda CII stability-governing protein K04087 hflC; modulator of FtsH protease HflC
D BRE_201 hflK; Lambda CII stability-governing protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bre01003]
D BRE_456 lipopolysaccharide biosynthesis-related protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D BRE_738 pbp-3; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bre01011]
D BRE_479 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BRE_602 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BRE_827 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BRE_590 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BRE_198 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BRE_197 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BRE_158 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BRE_102 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BRE_310 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BRE_774 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BRE_265 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BRE_821 mviN; virulence factor MviN protein K03980 murJ; putative peptidoglycan lipid II flippase
D BRE_738 pbp-3; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BRE_724 pbp-2; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BRE_139 pbp-1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BRE_609 dacA; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BRE_588 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BRE_266 uncharacterized conserved protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BRE_716 uncharacterized conserved protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D BRE_742 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BRE_672 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bre01004]
D BRE_597 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_140 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_332 glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BRE_41 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bre01006]
D BRE_122 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BRE_831 miaA; 2-methylthio-N6-isopentyladenosine tRNA modification enzyme K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:bre01007]
D BRE_665 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BRE_371 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BRE_369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BRE_10 trsA; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BRE_603 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BRE_598 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BRE_592 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BRE_844 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BRE_745 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BRE_252 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BRE_448 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BRE_103 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BRE_138 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BRE_370 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BRE_225 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BRE_402 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BRE_726 thrZ; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BRE_220 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BRE_518 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BRE_519 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bre03000]
D BRE_653 fur; ferric uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D BRE_737 uncharacterized conserved protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BRE_434 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BRE_357 transcription factor, putative K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BRE_166 DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:bre03021]
D BRE_508 rpoA; DNA-directed RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BRE_387 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BRE_386 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BRE_718 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D BRE_778 rpoS; RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D BRE_452 ntrA; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D BRE_811 nusA; N-utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D BRE_109 nusB; N-utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D BRE_392 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D BRE_526 Response regulator receiver (CheY) modulated Serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D BRE_807 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
D BRE_166 DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D BRE_229 rho; transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bre03019]
D BRE_710 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BRE_510 uncharacterized conserved protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BRE_340 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BRE_816 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BRE_229 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D BRE_733 pfk; pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BRE_523 dnaK-2; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_271 dnaK-1; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_655 groEL; heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BRE_182 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:bre03011]
D BRE_130 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BRE_125 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BRE_490 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BRE_620 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BRE_501 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BRE_117 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BRE_384 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BRE_498 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BRE_341 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BRE_483 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BRE_507 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BRE_385 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BRE_506 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BRE_497 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BRE_815 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BRE_701 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BRE_493 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BRE_115 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BRE_488 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BRE_232 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BRE_258 rpsU_1; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BRE_263 rpsU_2; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BRE_390 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BRE_487 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BRE_484 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BRE_485 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BRE_496 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BRE_499 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BRE_114 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BRE_389 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BRE_391 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BRE_388 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BRE_342 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BRE_494 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BRE_503 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BRE_491 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BRE_509 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BRE_500 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BRE_705 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BRE_186 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BRE_786 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BRE_489 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BRE_486 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BRE_495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BRE_788 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BRE_352 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BRE_492 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BRE_502 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BRE_228 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BRE_708 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BRE_395 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BRE_441 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BRE_187 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BRE_505 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BRE_795 ctc; 50S ribosomal protein L25, general stress protein K02897 RP-L25; large subunit ribosomal protein L25
D BRE_419 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BRE_428 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BRE_420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bre03009]
D BRE_710 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BRE_666 era; GTP-binding protein K03595 era; GTPase
D BRE_789 obg; GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D BRE_166 DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor
D BRE_811 nusA; N-utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D BRE_109 nusB; N-utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D BRE_392 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D BRE_594 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BRE_205 N6-adenine-specific methylase, putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BRE_359 uncharacterized protein conserved K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BRE_65 uncharacterized conserved protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BRE_175 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BRE_313 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BRE_429 uncharacterized conserved protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BRE_512 tlyA; hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BRE_521 yacO; rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BRE_320 ftsJ; ribosomal RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BRE_132 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BRE_825 rluA; RNA pseudouridylate synthase family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BRE_23 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BRE_703 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D BRE_101 uncharacterized conserved protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BRE_514 GTP-binding protein K03977 engA; GTPase
D BRE_649 conserved hypothetical GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D BRE_741 uncharacterized conserved protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BRE_195 spoT; guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BRE_813 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D BRE_810 uncharacterized conserved protein K09748 rimP; ribosome maturation factor RimP
D BRE_792 uncharacterized conserved protein K09710 ybeB; ribosome-associated protein
D BRE_63 uncharacterized conserved protein K07042 ybeY; probable rRNA maturation factor
D BRE_234 conserved hypothetical GTP-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bre03016]
D BRE_762 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D BRE_711 papS; tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D BRE_371 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BRE_402 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BRE_844 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BRE_252 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BRE_592 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BRE_598 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BRE_448 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BRE_220 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BRE_103 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BRE_370 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BRE_726 thrZ; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BRE_225 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BRE_603 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BRE_745 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BRE_138 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BRE_518 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BRE_519 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BRE_369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BRE_10 trsA; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BRE_377 pkcI; protein kinase C1 inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BRE_17 hisT; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BRE_814 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BRE_741 uncharacterized conserved protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BRE_831 miaA; 2-methylthio-N6-isopentyladenosine tRNA modification enzyme K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BRE_177 thdF; thiophene and furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BRE_176 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BRE_442 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BRE_665 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BRE_224 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D BRE_704 trmD; tRNA-(guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BRE_55 spoU; spoU protein K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D BRE_688 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BRE_26 queA; S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine synthetase) K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BRE_820 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BRE_797 cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BRE_183 uncharacterized conserved protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BRE_776 gcp; sialoglycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BRE_184 uncharacterized conserved protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BRE_816 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bre03012]
D BRE_812 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BRE_188 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BRE_124 tsf; translation elongation factor EF-TS K02357 tsf; elongation factor Ts
D BRE_482 tuf; translation elongation factor TU K02358 tuf; elongation factor Tu
D BRE_698 fus-2; translation elongation factor G K02355 fusA; elongation factor G
D BRE_544 fus-1; translation elongation factor G K02355 fusA; elongation factor G
D BRE_193 prfA; peptide chain release factor A K02835 prfA; peptide chain release factor 1
D BRE_123 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D BRE_194 HemK family methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BRE_796 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BRE_167 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BRE_214 efp; elongation factor EF-P K02356 efp; elongation factor P
D BRE_77 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bre03110]
D BRE_845 clpC; ATP-dependent Clp protease, subunit C K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D BRE_618 clpX; ATP-dependent Clp protease, subunit X K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BRE_302 hslU; heat shock protein K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D BRE_565 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D BRE_523 dnaK-2; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_271 dnaK-1; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_655 groEL; heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BRE_522 dnaJ-1; heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D BRE_661 dnaJ-2; heat shock protein K05516 cbpA; curved DNA-binding protein
D BRE_606 dnaJ; chaperone protein DnaJ K05801 djlA; DnaJ like chaperone protein
D BRE_524 grpE; chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D BRE_447 heat shock protein, HSP20 family K13993 HSP20; HSP20 family protein
D BRE_747 groES; chaperonin groES K04078 groES; chaperonin GroES
D BRE_800 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D BRE_798 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BRE_411 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BRE_64 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:bre04131]
D BRE_469 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BRE_60 gap; glyceraldehyde 3-phosphate dehydrogenase (GAPDH) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BRE_664 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BRE_351 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BRE_565 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:bre04121]
C 03051 Proteasome [BR:bre03051]
D BRE_565 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bre03032]
D BRE_231 HbbU protein K05788 ihfB; integration host factor subunit beta
D BRE_437 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D BRE_113 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BRE_717 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BRE_116 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BRE_585 dnaE; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BRE_438 dnaN; DNA polymerase III, subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BRE_457 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BRE_466 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_772 DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_49 rnhB; ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BRE_553 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BRE_557 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BRE_470 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BRE_435 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BRE_436 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BRE_39 parC; DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BRE_40 parE; DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BRE_838 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bre03036]
D BRE_710 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BRE_231 HbbU protein K05788 ihfB; integration host factor subunit beta
D BRE_661 dnaJ-2; heat shock protein K05516 cbpA; curved DNA-binding protein
D BRE_437 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D BRE_697 napA_2; neutrophil activating protein K04047 dps; starvation-inducible DNA-binding protein
D BRE_48 P115 protein K03529 smc; chromosome segregation protein
D BRE_307 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D BRE_139 pbp-1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BRE_264 ftsK2; DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BRE_259 ftsK1; FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BRE_308 divIB; cell division protein K03589 ftsQ; cell division protein FtsQ
D BRE_309 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D BRE_306 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BRE_672 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BRE_721 mreB-1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BRE_722 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D BRE_725 mreB-2; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D BRE_7002 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_4018 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_3015 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_6017 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_1085 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_5011 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_2008 pf32_1; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_2020 pf32_2; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_2040 pf32_3; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_737 uncharacterized conserved protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BRE_434 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BRE_39 parC; DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BRE_40 parE; DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BRE_176 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BRE_175 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
C 03400 DNA repair and recombination proteins [BR:bre03400]
D BRE_56 ung; uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BRE_425 mag; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D BRE_753 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BRE_18 uncharacterized conserved protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D BRE_534 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BRE_256 recJ1; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BRE_557 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BRE_553 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BRE_848 uvrA; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D BRE_847 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D BRE_458 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D BRE_347 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BRE_387 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BRE_386 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BRE_508 rpoA; DNA-directed RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BRE_630 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BRE_808 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D BRE_210 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D BRE_585 dnaE; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BRE_438 dnaN; DNA polymerase III, subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BRE_457 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BRE_466 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_772 DNA polymerase III gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BRE_116 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BRE_470 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BRE_640 recB; exodeoxyribonuclease V, beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BRE_641 recC; exodeoxyribonuclease V, gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BRE_639 recD; exodeoxyribonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BRE_28 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D BRE_27 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BRE_19 priA; primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BRE_840 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D BRE_839 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D BRE_439 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BRE_587 recG; DNA recombinase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BRE_468 recR; recombination protein RecR K06187 recR; recombination protein RecR
D BRE_317 recN; ATPase involved in DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N)
D BRE_435 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BRE_436 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BRE_838 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BRE_231 HbbU protein K05788 ihfB; integration host factor subunit beta
D BRE_743 ATP-dependent helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D BRE_1046 nrdE; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BRE_1045 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BRE_625 uncharacterized conserved protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bre03029]
D BRE_812 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BRE_188 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BRE_124 tsf; translation elongation factor EF-TS K02357 tsf; elongation factor Ts
D BRE_482 tuf; translation elongation factor TU K02358 tuf; elongation factor Tu
D BRE_698 fus-2; translation elongation factor G K02355 fusA; elongation factor G
D BRE_544 fus-1; translation elongation factor G K02355 fusA; elongation factor G
D BRE_666 era; GTP-binding protein K03595 era; GTPase
D BRE_369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BRE_252 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BRE_448 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BRE_370 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BRE_598 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BRE_345 gatA; glu-tRNA amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BRE_344 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BRE_346 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BRE_408 nucA; endonuclease precursor K01173 ENDOG; endonuclease G, mitochondrial
D BRE_116 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BRE_805 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BRE_523 dnaK-2; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_271 dnaK-1; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_524 grpE; chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D BRE_655 groEL; heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BRE_747 groES; chaperonin groES K04078 groES; chaperonin GroES
D BRE_522 dnaJ-1; heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D BRE_443 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BRE_565 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bre02000]
D BRE_645 potD; spermidine/putrescine ABC transporter, binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BRE_646 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D BRE_647 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D BRE_648 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BRE_146 proX; glycine betaine/L-proline transport system substrate-binding protein; lipoprotein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BRE_147 proW; glycine betaine/L-proline transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D BRE_148 proV; glycine betaine/L-proline transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BRE_383 bmpD; basic membrane protein D K07335 bmpA; basic membrane protein A and related proteins
D BRE_380 bmpA-1; basic membrane protein A K07335 bmpA; basic membrane protein A and related proteins
D BRE_382 bmpA-2; basic membrane protein A; lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D BRE_381 bmpC; basic membrane protein C; lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D BRE_684 rbsC-1; ribose/galactose ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D BRE_685 rbsC-2; ribose/galactose ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D BRE_683 mglA; ribose/galactose ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D BRE_326 tpn38b; exported protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D BRE_324 conserved hypothetical integral membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein
D BRE_325 mglA-1; methylgalactoside ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BRE_215 pstS; phosphate ABC transporter, periplasmic phosphate-binding K02040 pstS; phosphate transport system substrate-binding protein
D BRE_216 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D BRE_217 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D BRE_218 pstB; phosphate transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BRE_334 oppA-2; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BRE_335 oppB-1; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D BRE_336 oppC-1; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D BRE_337 oppD; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D BRE_338 oppF; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BRE_755 oppB-2; oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BRE_754 oppC-2; oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BRE_818 conserved hypothetical integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D BRE_819 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D BRE_473 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BRE_760 putative ABC-2 type transport system permease protein K25151 gldF; gliding motility-associated transport system permease protein
D BRE_761 putative ABC-2 type transport system ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D BRE_759 uncharacterized conserved protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D BRE_81 lipoprotein releasing system, permease protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein
D BRE_83 ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BRE_82 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BRE_580 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BRE_480 conserved hypothetical integral membrane protein K26937 dinF; MATE family, multidrug efflux pump
D BRE_589 conserved hypothetical integral membrane protein K26937 dinF; MATE family, multidrug efflux pump
D BRE_241 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D BRE_563 ptsI; phosphoenolpyruvate-protein phosphatase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BRE_562 ptsH-2; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BRE_450 ptsH-1; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BRE_564 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BRE_836 nagE; Sugar Specific PTS family, n-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BRE_651 ptsG; PTS system, glucose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_6010 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BRE_406 fruA-1; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BRE_636 fruA-2; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BRE_239 glpF; glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator
D BRE_170 uncharacterized conserved protein K07114 yfbK; Ca-activated chloride channel homolog
D BRE_171 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D BRE_455 uncharacterized conserved protein K03442 mscS; small conductance mechanosensitive channel
D BRE_378 mgtE; Mg2 transport protein K06213 mgtE; magnesium transporter
D BRE_288 motA; flagellar motor rotation protein A K02556 motA; chemotaxis protein MotA
D BRE_287 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
D BRE_200 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BRE_805 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BRE_472 uncharacterized conserved protein K09774 lptA; lipopolysaccharide export system protein LptA
D BRE_62 tlyC; hemolysin K06189 corC; hemolysin (HlyC) family protein
D BRE_219 gufA; GufA protein K07238 TC.ZIP; zinc transporter, ZIP family
D BRE_608 lctP; L-lactate permease K03303 lutP; lactate permease
D BRE_162 Na+/Ca+ exchange protein K07301 yrbG; cation:H+ antiporter
D BRE_824 panF; pantothenate permease K14392 panF; sodium/pantothenate symporter
D BRE_401 glutamate transporter, putative K11103 dctA; aerobic C4-dicarboxylate transport protein
D BRE_449 napA_1; Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D BRE_730 ntpJ; K transport protein K03498 trkH; trk/ktr system potassium uptake protein
D BRE_731 uncharacterized conserved protein K03499 trkA; trk/ktr system potassium uptake protein
D BRE_6004 guanine-hypoxanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D BRE_453 chromate transport protein, putative K07240 chrA; chromate transporter
D BRE_454 Chromate transport protein, putative K07240 chrA; chromate transporter
D BRE_821 mviN; virulence factor MviN protein K03980 murJ; putative peptidoglycan lipid II flippase
D BRE_53 uncharacterized conserved protein K09125 yhhQ; queuosine precursor transporter
D BRE_54 uncharacterized conserved protein K09125 yhhQ; queuosine precursor transporter
D BRE_309 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
C 02044 Secretion system [BR:bre02044]
D BRE_586 conserved hypothetical integral membrane protein K02221 yggT; YggT family protein
D BRE_595 competence locus E, putative K02238 comEC; competence protein ComEC
D BRE_278 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D BRE_279 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D BRE_298 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D BRE_296 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D BRE_295 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BRE_284 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D BRE_283 fliZ; flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D BRE_282 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D BRE_281 fliQ; flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D BRE_280 fliR; flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D BRE_154 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BRE_658 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D BRE_393 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BRE_659 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D BRE_57 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D BRE_504 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BRE_700 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BRE_79 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D BRE_657 yajC; preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BRE_443 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:bre02042]
D BRE_200 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:bre02022]
D BRE_771 sensory transduction histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D BRE_675 cheA-2; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_572 cheA-1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_678 cheY3; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_575 cheY-2; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_556 cheY-1; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_573 cheB-2; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_413 cheB-1; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_418 sensory transduction histidine kinase K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
D BRE_417 rrp-1; response regulatory protein K18444 rrp1; two-component system, glycerol uptake and utilization response regulator
C 02035 Bacterial motility proteins [BR:bre02035]
D BRE_675 cheA-2; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_572 cheA-1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BRE_319 cheW-1; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_676 cheW-3; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_570 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BRE_677 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D BRE_610 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D BRE_44 cheR-1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BRE_412 cheR-2; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BRE_573 cheB-2; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_413 cheB-1; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BRE_678 cheY3; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_575 cheY-2; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_556 cheY-1; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BRE_584 mcp-1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_600 mcp-2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_601 mcp-3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_686 mcp-4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_687 mcp-5; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BRE_296 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D BRE_295 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BRE_283 fliZ; flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D BRE_282 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D BRE_281 fliQ; flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D BRE_280 fliR; flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D BRE_278 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D BRE_279 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D BRE_297 fliG-2; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BRE_221 fliG-1; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BRE_285 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D BRE_284 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D BRE_298 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D BRE_780 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D BRE_286 fliL; flagellar protein K02415 fliL; flagellar protein FliL
D BRE_299 fliE; flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D BRE_301 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D BRE_300 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D BRE_291 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D BRE_783 flhO; flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D BRE_782 flgG; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D BRE_779 flgJ; flagellum-specific muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D BRE_290 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D BRE_179 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D BRE_180 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D BRE_149 flaB; flagellar filament 41 kDa core protein K02406 fliC; flagellin
D BRE_150 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D BRE_555 flaJ; flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D BRE_288 motA; flagellar motor rotation protein A K02556 motA; chemotaxis protein MotA
D BRE_287 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
D BRE_181 uncharacterized conserved protein K13626 fliW; flagellar assembly factor FliW
D BRE_294 flbA; flagellar protein K02382 flbA; flagellar protein FlbA
D BRE_293 flbB; flagellar protein K02383 flbB; flagellar protein FlbB
D BRE_292 flbC; flagellar protein K02384 flbC; flagellar protein FlbC
D BRE_289 flbD; flagellar protein K02385 flbD; flagellar protein FlbD
D BRE_277 flhF; flagellar-associated GTP-binding protein K02404 flhF; flagellar biosynthesis protein FlhF
D BRE_362 ylxH-2; ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D BRE_732 ylxH-3; MinD-related ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D BRE_276 ylxH-1; ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bre04812]
D BRE_721 mreB-1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BRE_306 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BRE_307 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D BRE_7002 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_4018 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_3015 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_6017 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_1085 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_5011 pf32; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_2008 pf32_1; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_2020 pf32_2; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_2040 pf32_3; PF32 plasmid partition protein K03496 parA; chromosome partitioning protein
D BRE_737 uncharacterized conserved protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BRE_434 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bre04147]
D BRE_565 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D BRE_340 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BRE_60 gap; glyceraldehyde 3-phosphate dehydrogenase (GAPDH) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BRE_59 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BRE_351 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BRE_411 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BRE_655 groEL; heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BRE_523 dnaK-2; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_271 dnaK-1; heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D BRE_736 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BRE_1109 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BRE_482 tuf; translation elongation factor TU K02358 tuf; elongation factor Tu
D BRE_377 pkcI; protein kinase C1 inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BRE_89 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BRE_597 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_140 long-chain-fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BRE_111 fadA; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BRE_415 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BRE_785 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BRE_643 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BRE_58 tpi; triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BRE_664 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bre02048]
D BRE_470 putative adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BRE_306 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BRE_721 mreB-1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BRE_39 parC; DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BRE_40 parE; DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BRE_371 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:bre04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bre01504]
D BRE_588 carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bre03100]
D BRE_427 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BRE_464 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BRE_613 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BRE_752 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BRE_633 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BRE_638 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BRE_199 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BRE_794 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BRE_538 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BRE_51 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BRE_615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BRE_612 tRNA-His K14226 tRNA-His; tRNA His
D BRE_426 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BRE_766 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_577 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_251 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_614 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BRE_539 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BRE_540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BRE_212 tRNA-Met K14230 tRNA-Met; tRNA Met
D BRE_621 tRNA-Met K14230 tRNA-Met; tRNA Met
D BRE_627 tRNA-Met K14230 tRNA-Met; tRNA Met
D BRE_203 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BRE_751 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BRE_461 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BRE_462 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BRE_465 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BRE_396 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BRE_714 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BRE_394 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BRE_715 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BRE_695 tRNA-Val K14237 tRNA-Val; tRNA Val
D BRE_428 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BRE_420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BRE_419 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BRE_52 BRE_52 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BRE_236 apolipoprotein N-acyltransferase, putative K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D BRE_363 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BRE_410 conserved hypothetical integral membrane protein K18678 VTE5; phytol kinase [EC:2.7.1.182]
D BRE_13 uncharacterized conserved protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D BRE_191 Tatd, Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BRE_68 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BRE_174 moxR; methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D BRE_599 uncharacterized conserved protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D BRE_87 uncharacterized conserved protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D BRE_1047 nrdI; ribonucleoprotein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D BRE_616 tig; trigger factor K03545 tig; trigger factor
D BRE_37 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D BRE_88 magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D BRE_850 uncharacterized conserved protein K06993 K06993; ribonuclease H-related protein
D BRE_1039 transposase IS200-like protein K07491 rayT; REP-associated tyrosine transposase
D BRE_1038 transposase IS605 OrfB K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D BRE_21 glpE; GlpE protein (GlpE) K03972 pspE; phage shock protein E
D BRE_467 uncharacterized conserved protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D BRE_142 acrB; acriflavine resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
C 99978 Cell growth
D BRE_444 jag; spoIIIJ-associated protein K06346 jag; spoIIIJ-associated protein
D BRE_793 stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
D BRE_806 uncharacterized conserved protein K06142 hlpA; outer membrane protein
D BRE_11 conserved hypothetical integral membrane protein K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D BRE_45 phoU; phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D BRE_842 cutC; copper homeostasis protein cutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BRE_773 colicin V production protein, putative K03558 cvpA; membrane protein required for colicin V production
D BRE_516 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D BRE_767 uncharacterized conserved protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D BRE_400 uncharacterized conserved protein K06867 K06867; uncharacterized protein
D BRE_543 conserved hypothetical integral membrane protein K06890 K06890; uncharacterized protein
D BRE_735 gltP; glutamate transporter K06956 K06956; uncharacterized protein
D BRE_702 uncharacterized conserved protein K06960 K06960; uncharacterized protein
D BRE_253 conserved hypothetical integral membrane protein K07003 K07003; uncharacterized protein
D BRE_105 uncharacterized conserved protein K07101 K07101; uncharacterized protein
D BRE_719 uncharacterized conserved protein K07164 K07164; uncharacterized protein
D BRE_145 hlyA; alpha-hemolysin K08998 K08998; uncharacterized protein
D BRE_669 uncharacterized conserved protein K09005 K09005; uncharacterized protein
D BRE_274 uncharacterized conserved protein K09749 K09749; uncharacterized protein
D BRE_16 uncharacterized conserved protein K09766 K09766; uncharacterized protein
D BRE_33 uncharacterized conserved protein K09768 K09768; uncharacterized protein
D BRE_244 uncharacterized conserved protein K09770 K09770; uncharacterized protein
D BRE_73 uncharacterized conserved protein K09775 K09775; uncharacterized protein
D BRE_223 uncharacterized conserved protein K09797 K09797; uncharacterized protein
D BRE_777 uncharacterized conserved protein K09798 K09798; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024