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Transcription Machinery - Phocaeicola vulgatus
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E BVU_0780 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E BVU_0813 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E BVU_0812 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sigma factors
E BVU_2738 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
E BVU_1804 putative RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BVU_1053 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BVU_4129 putative RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BVU_1339 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BVU_2572 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BVU_2581 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BVU_0627 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_2027 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0023 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_1056 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_1775 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0387 putative RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_2211 putative RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_1779 putative ECF-type RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0502 putative RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0109 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0367 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0735 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_2218 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_0944 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_1982 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E BVU_1419 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E BVU_1354 putative nitrogen utilization substance protein K02600 nusA; transcription termination/antitermination protein NusA
E BVU_3821 putative N utilization substance protein K03625 nusB; transcription antitermination protein NusB
E BVU_0818 transcription anti-termination protein K02601 nusG; transcription termination/antitermination protein NusG
E BVU_2387 putative transcriptional regulator UpxY-like protein K02601 nusG; transcription termination/antitermination protein NusG
D Transcription elongation factors
E BVU_3060 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
E BVU_1433 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E BVU_2933 putative transcription termination factor K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024