+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Ruminiclostridium cellulolyticum
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ACRISPR-Cas system
B Universal Cas proteins
C Ccel_1482 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Ccel_3119 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Ccel_3118 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
C Ccel_1483 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Ccel_1476 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D Ccel_1480 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Ccel_1477 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d
C Subtype I-D factors
D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
D Ccel_3120 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
C Subtype II-A factors
C Subtype II-B factors
D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C Ccel_2726 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Ccel_2722 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Ccel_2724 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Ccel_2725 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Ccel_0834 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Ccel_2787 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C Ccel_2845 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C Ccel_0568 hypothetical protein K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D Ccel_2924 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Ccel_2945 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Ccel_2925 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
D Ccel_1497 conserved hypothetical protein K21494 yxxD; antitoxin YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Ccel_2064 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Ccel_2563 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Ccel_3102 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023