+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Ruminiclostridium cellulolyticum

% ! ACRISPR-Cas system B Universal Cas proteins C Ccel_1482 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C Ccel_3119 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C Ccel_3118 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 C Ccel_1483 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D Ccel_1476 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D Ccel_1480 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Ccel_1477 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d C Subtype I-D factors D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins D Ccel_3120 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] C Subtype II-A factors C Subtype II-B factors D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C Ccel_2726 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C Ccel_2722 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C Ccel_2724 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C Ccel_2725 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D Ccel_0834 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2787 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C Ccel_2845 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] C Ccel_0568 hypothetical protein K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D Ccel_2924 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Ccel_2945 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Ccel_2925 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD D Ccel_1497 conserved hypothetical protein K21494 yxxD; antitoxin YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D Ccel_2064 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Ccel_2563 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_3102 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023