+D GENES KO
#
KEGG Orthology (KO) - Cupriavidus gilardii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cgd00010]
D CR3_1525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CR3_0810 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CR3_2108 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CR3_0857 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CR3_2330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CR3_2110 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CR3_0252 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_0410 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_0967 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CR3_2757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_2109 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_1174 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CR3_1610 aceE; pyruvate dehydrogenase subunit E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CR3_1609 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4002 ldh; malate/L-lactate dehydrogenase family protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_1418 exaA; Quinoprotein ethanol dehydrogenase precursor K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1409 aldB; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_4258 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_1201 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_4493 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_0151 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_3015 bioW; 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_2874 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cgd00020]
D CR3_1902 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CR3_3672 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CR3_3910 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CR3_1912 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CR3_2246 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CR3_3459 isocitrate dehydrogenase (NAD+) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CR3_1655 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CR3_1654 sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4125 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_2127 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_4124 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_2128 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_1905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CR3_1904 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CR3_1907 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CR3_1906 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CR3_1827 fumB; fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CR3_4397 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CR3_4550 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CR3_2874 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CR3_1610 aceE; pyruvate dehydrogenase subunit E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CR3_1609 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cgd00030]
D CR3_1525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CR3_4558 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CR3_4557 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CR3_2444 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CR3_2331 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CR3_1682 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CR3_1681 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_3885 phnN; guanylate kinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D CR3_0295 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CR3_4559 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D CR3_3517 eda; ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CR3_3948 gdh; short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D CR3_4201 SMP-30/gluconolaconase/LRE domain-containing protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CR3_4023 gluconate 2-dehydrogenase alpha chain K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D CR3_4024 gluconate 2-dehydrogenase subunit 3 K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D CR3_1876 ldhA; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CR3_0960 idnK; gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CR3_3516 kdgK; 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CR3_2756 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0396 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_2108 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CR3_0810 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:cgd00040]
D CR3_0700 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CR3_1980 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CR3_2444 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CR3_3976 aldH; 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CR3_0768 aldH; 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CR3_3395 putA; NAD-dependent aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D CR3_3905 putA; NAD-dependent aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D CR3_4375 fucA; class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cgd00051]
D CR3_2973 rfbA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CR3_0493 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_2972 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CR3_2967 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CR3_4375 fucA; class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CR3_2899 ugl; 5-carboxymethyl-2-hydroxymuconate delta-isomerase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D CR3_3352 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D CR3_0810 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CR3_2108 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CR3_0857 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CR3_0244 pts system fructose iia component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:cgd00052]
D CR3_4440 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CR3_2962 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CR3_1980 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_3728 dgoD; putative mandelate racemase / muconatelactonizing enzyme K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D CR3_2019 malZ; oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cgd00053]
D CR3_0700 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CR3_4201 SMP-30/gluconolaconase/LRE domain-containing protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_0771 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D CR3_3977 araC; L-arabonate dehydrase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D CR3_3974 araD; dihydrodipicolinate synthase K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D CR3_3976 aldH; 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CR3_0768 aldH; 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CR3_0769 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D CR3_3080 garD; D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D CR3_3082 MdlA K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42]
D CR3_4200 amidohydrolase K18982 gli; D-galactarolactone isomerase [EC:5.4.1.4]
D CR3_3860 l-alanine-dl-glutamate epimerase and related enzymes of enolase superfamily K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C 00500 Starch and sucrose metabolism [PATH:cgd00500]
D CR3_2019 malZ; oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CR3_1980 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CR3_4396 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CR3_1803 bcsA; cellulose synthase (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D CR3_4217 glgA; starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CR3_4211 glgB; glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CR3_4216 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CR3_4210 treS; maltose alpha-D-glucosyltransferase/alpha-amylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CR3_2018 treS; maltose alpha-D-glucosyltransferase/alpha-amylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CR3_4213 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CR3_4209 glgE; glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CR3_0108 glgX; glycogen operon protein K01214 ISA; isoamylase [EC:3.2.1.68]
D CR3_4212 glgX; glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D CR3_4219 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CR3_4218 treZ; maltooligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D CR3_0346 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CR3_0344 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_1525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cgd00520]
D CR3_1845 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CR3_0171 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CR3_1759 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CR3_0170 glmU; glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CR3_0406 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CR3_0684 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D CR3_2159 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D CR3_2162 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CR3_2527 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CR3_3973 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CR3_2250 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CR3_0498 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CR3_3423 rffG; dTDP-glucose 4,6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_1980 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CR3_0700 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CR3_4440 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CR3_2962 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CR3_0244 pts system fructose iia component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CR3_1525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CR3_2973 rfbA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CR3_0493 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CR3_2972 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CR3_2967 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CR3_3397 ddhD; CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CR3_2215 ascD; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:cgd00620]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1610 aceE; pyruvate dehydrogenase subunit E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CR3_1609 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_1418 exaA; Quinoprotein ethanol dehydrogenase precursor K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CR3_4155 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CR3_2757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_2109 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_1004 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CR3_0153 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_2355 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_0152 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CR3_1891 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CR3_3800 bccA; Acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1409 aldB; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CR3_1948 pct; CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CR3_4258 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_1201 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_4493 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_0151 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_3015 bioW; 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_4002 ldh; malate/L-lactate dehydrogenase family protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CR3_2278 D-lactate dehydrogenase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D CR3_2154 gloA; glyoxalase/bleomycin resistance protein/ring-cleaving dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CR3_1776 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CR3_2743 gloB; Zn-dependent hydrolase, including glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CR3_0092 ghrA; 6-phosphogluconate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CR3_1876 ldhA; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CR3_2338 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CR3_1827 fumB; fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CR3_4397 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CR3_4550 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CR3_0477 ppc; phosphoenolpyruvate carboxylase (c terminal part) protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CR3_2874 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CR3_1174 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CR3_1126 glcB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_0851 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CR3_3048 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cgd00630]
D CR3_1122 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1126 glcB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CR3_1902 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CR3_3672 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CR3_3910 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CR3_1912 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1569 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D CR3_3800 bccA; Acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CR3_2280 glcD; glycolate oxidase subunit, FAD-linked K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CR3_2282 glcE; glycolate oxidase FAD binding subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D CR3_2283 glpC; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CR3_2292 cAT; catalase K03781 katE; catalase [EC:1.11.1.6]
D CR3_0092 ghrA; 6-phosphogluconate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CR3_1876 ldhA; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CR3_1869 phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CR3_2445 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CR3_0555 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CR3_2787 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CR3_2785 gcvT; aminomethyltransferase (glycine cleavage system tprotein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_2786 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CR3_2753 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D CR3_2754 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D CR3_2917 tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CR3_2755 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CR3_2184 tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CR3_2756 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0396 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0395 ttuC; 3-isopropylmalate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CR3_3517 eda; ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CR3_2056 fdsD; NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CR3_2058 fdfH; formate dehydrogenase formation protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CR3_0465 fdoG; formate dehydrogenase major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CR3_4114 fdoG; formate dehydrogenase major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CR3_4115 NADH-quinone oxidoreductase subunit F K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D CR3_2059 nuoF; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CR3_0466 fdoH; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CR3_2060 fdoI; formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D CR3_0468 fdoI; formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D CR3_3935 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CR3_3941 aes; Esterase/lipase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CR3_0575 kynB; metal-dependent hydrolase/cyclase K07130 kynB; arylformamidase [EC:3.5.1.9]
D CR3_1791 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CR3_2204 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:cgd00640]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1774 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D CR3_1948 pct; CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CR3_4258 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_1201 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_4493 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_0151 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_3015 bioW; 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_4155 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_0081 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CR3_2458 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_1004 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CR3_0153 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_2355 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_0152 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CR3_1891 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CR3_3800 bccA; Acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CR3_0431 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_0211 beta alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CR3_4124 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_2128 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_4125 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_2127 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_3344 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_3502 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_1237 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CR3_1911 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D CR3_1236 acnA; aconitate hydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D CR3_1235 hypothetical protein K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D CR3_4002 ldh; malate/L-lactate dehydrogenase family protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CR3_0751 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:cgd00650]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_0899 fadB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CR3_0216 fadB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CR3_3304 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_1482 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_0378 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_4171 3-hydroxybutyryl-CoA dehydratase, putative K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0081 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CR3_1571 phbC; polyhydroxyalkanoate synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D CR3_0718 Intracellular PHB depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D CR3_1569 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D CR3_0395 ttuC; 3-isopropylmalate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CR3_3009 nicE; maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D CR3_1905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CR3_1904 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CR3_1907 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CR3_1906 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_3596 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3230 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3150 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_0540 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_1469 gbd; 4-hydroxybutyrate dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D CR3_1718 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_0093 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_3927 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_1034 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CR3_1035 acetyl-CoA:acetoacetyl-CoA transferase, subunit beta K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CR3_0539 acsA; acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D CR3_1037 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D CR3_1108 cytochrome C1 K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D CR3_0845 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3550 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3232 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_0846 ilvN; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cgd00660]
D CR3_0845 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3550 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3232 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_0846 ilvN; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CR3_0428 caiB; putative acyl-CoA transferase/carnitine dehydratase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D CR3_4124 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_2128 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_4125 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_2127 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_3969 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CR3_1900 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_2065 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3032 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3198 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_1899 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3031 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3199 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CR3_1898 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cgd00562]
D CR3_3880 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3843 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3844 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_0995 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CR3_3344 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_3502 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_0857 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cgd00190]
D CR3_0860 nuoA; NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CR3_0861 nuoC; NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CR3_0862 nuoD; NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CR3_0863 nuoE; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CR3_0864 nuoF; NADH:ubiquinone oxidoreductase, chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CR3_0865 nuoG; NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CR3_0866 nuoH; NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CR3_0867 nuoI; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CR3_0868 nuoJ; NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CR3_0869 nuoK; NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CR3_0870 nuoL; NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CR3_0871 nuoM; NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CR3_0872 nuoN; NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CR3_1971 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CR3_1905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CR3_1904 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CR3_1907 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CR3_1906 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CR3_2509 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CR3_2508 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CR3_2507 ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CR3_3286 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D CR3_3139 putative small integral membrane protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CR3_0268 coxC; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CR3_3137 coxC; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CR3_3138 coxC; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CR3_0263 coxA; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CR3_0264 coxA; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CR3_3136 coxA; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CR3_0262 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CR3_3135 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CR3_0266 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CR3_0272 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D CR3_1649 ccoN; cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CR3_1648 ccoO; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CR3_1647 ccoQ; Cbb3-type cytochrome oxidase subunit III K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CR3_3285 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D CR3_3284 cyoB; cytochrome o ubiquinol oxidase subunit I 2 K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D CR3_3283 cyoA; cytochrome O ubiquinol oxidase K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D CR3_3240 cydB; cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CR3_2732 cytochrome C K08738 CYC; cytochrome c
D CR3_1419 cytochrome c551/c552 K08738 CYC; cytochrome c
D CR3_2803 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CR3_2801 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CR3_2802 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CR3_2804 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CR3_2800 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CR3_2807 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CR3_2805 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CR3_2806 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CR3_1989 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CR3_2062 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cgd00710]
D CR3_2110 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CR3_2330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CR3_2108 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CR3_0810 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CR3_2331 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CR3_1681 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CR3_0857 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CR3_2444 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CR3_1682 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CR3_0477 ppc; phosphoenolpyruvate carboxylase (c terminal part) protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CR3_2338 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cgd00720]
D CR3_1174 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CR3_0477 ppc; phosphoenolpyruvate carboxylase (c terminal part) protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CR3_1827 fumB; fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CR3_4397 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CR3_4550 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CR3_1905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CR3_1904 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CR3_1907 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CR3_1906 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CR3_4125 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_2127 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CR3_4124 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_2128 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_2246 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CR3_1912 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CR3_1004 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CR3_0153 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_2355 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_0152 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CR3_1891 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CR3_4507 meh; 3-methylfumaryl-CoA hydratase K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D CR3_1613 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CR3_0158 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CR3_4155 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cgd00680]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_3507 frmB; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D CR3_2058 fdfH; formate dehydrogenase formation protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CR3_0465 fdoG; formate dehydrogenase major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CR3_4114 fdoG; formate dehydrogenase major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CR3_4115 NADH-quinone oxidoreductase subunit F K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D CR3_2059 nuoF; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CR3_0466 fdoH; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CR3_2060 fdoI; formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D CR3_0468 fdoI; formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D CR3_2056 fdsD; NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CR3_0555 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CR3_2756 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0396 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0967 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CR3_0477 ppc; phosphoenolpyruvate carboxylase (c terminal part) protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CR3_2108 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CR3_0810 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CR3_4155 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1174 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CR3_0252 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_0410 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_4203 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_3437 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_0689 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CR3_1561 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cgd00910]
D CR3_4247 narK; high affinity nitrate/nitrite transporter transmembrane protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CR3_0281 nrtA; nitrate/nitrite transport system substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CR3_4250 nirB; nitrite reductase (NADH) large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D CR3_4248 nirB; nitrite reductase (NADH) large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D CR3_4249 nirD; assimilatory nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D CR3_3370 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CR3_4442 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CR3_0225 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CR3_1623 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CR3_0389 gdhA; glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CR3_4141 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CR3_2538 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CR3_2537 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CR3_0658 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CR3_0078 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cgd00920]
D CR3_1115 cysU; sulfate transport system permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D CR3_1116 cysW; sulfate transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D CR3_1117 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CR3_4154 tauA; taurine transport system substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D CR3_4152 tauC; TauT family ABC transporter permease K15552 tauC; taurine transport system permease protein
D CR3_4153 tauB; TauT family ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CR3_3960 ssuA; sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3965 ssuA; sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3578 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_1716 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3723 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3579 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_3725 tauC; TauT family ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_1714 tauC; TauT family ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_3963 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3724 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3580 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_1715 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3577 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D CR3_3964 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D CR3_3962 ssuE; NADPH-dependent FMN reductase oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CR3_2175 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CR3_2176 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CR3_0514 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CR3_2177 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CR3_3788 yedY; sulfoxide reductase catalytic subunit YedY K05301 sorA; sulfite dehydrogenase (cytochrome) subunit A [EC:1.8.2.1]
D CR3_2728 hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D CR3_2727 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D CR3_2731 soxY; sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D CR3_1416 putative secreted protein K17226 soxY; sulfur-oxidizing protein SoxY
D CR3_2730 soxZ; sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D CR3_2725 ushA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase-related esterase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D CR3_2734 soxC; sulfane dehydrogenase subunit SoxC K17225 soxC; sulfane dehydrogenase subunit SoxC
D CR3_2733 cytochrome C K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D CR3_2179 cysI; sulfite reductase subunit beta (hemoprotein) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D CR3_2737 flavocytochrome C sulfide dehydrogenase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D CR3_2738 cytochrome C553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D CR3_2791 gloB; Zn-dependent hydrolase, including glyoxylase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D CR3_1292 sulfur dioxygenase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D CR3_1967 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CR3_0997 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CR3_0123 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CR3_0806 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CR3_1887 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CR3_1015 Selenium-binding protein 1 K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D CR3_1488 long-chain fatty acid-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D CR3_0714 caiA; acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D CR3_0375 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cgd00061]
D CR3_1004 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CR3_0153 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_2355 accB; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CR3_0152 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CR3_1891 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CR3_3800 bccA; Acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CR3_1858 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CR3_4097 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CR3_1860 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CR3_1861 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CR3_4104 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CR3_1857 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CR3_1216 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_0750 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1859 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3291 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3732 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3932 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_2348 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4096 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1168 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CR3_1743 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CR3_3293 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3553 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2491 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0016 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2422 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0218 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cgd00071]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_0379 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_3304 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_1482 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_0378 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_0081 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CR3_3895 caiA; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_1009 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_0891 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_4505 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_3108 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_1771 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_0571 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CR3_3293 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3553 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2491 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0016 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2422 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0218 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cgd00561]
D CR3_2756 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0396 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1793 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CR3_1862 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CR3_2090 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CR3_2152 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CR3_0487 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CR3_0837 dgkA; membrane protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CR3_0838 rfaG; glycosyl transferase family 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:cgd00564]
D CR3_0256 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CR3_1794 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CR3_2090 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CR3_2152 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CR3_0487 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CR3_0837 dgkA; membrane protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CR3_3880 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3843 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3844 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_4461 phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D CR3_3359 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CR3_1656 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CR3_2170 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CR3_3078 eutB; ethanolamine ammonia-lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D CR3_3079 eutC; ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D CR3_1162 CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CR3_3870 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CR3_0849 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CR3_0848 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CR3_3816 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CR3_1841 pgsAPGS1; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CR3_2340 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D CR3_4415 ybhO; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CR3_0373 ybhO; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CR3_3556 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CR3_0668 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CR3_1399 cls; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D CR3_3518 cls; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D CR3_0650 fixC; FAD binding protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism [PATH:cgd00565]
D CR3_3880 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3843 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3844 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_4461 phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
D CR3_3471 Fe-S oxidoreductase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:cgd00592]
D CR3_0379 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cgd01040]
D CR3_1527 tesA; arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CR3_0381 yciA; acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cgd00230]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_0295 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CR3_1888 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CR3_0745 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CR3_2233 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CR3_4187 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CR3_1514 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CR3_2263 purM; putative permease K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CR3_2105 purK; phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CR3_2106 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CR3_2107 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CR3_2308 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CR3_2168 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CR3_0314 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CR3_1712 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CR3_2252 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CR3_1573 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CR3_2377 hprT; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CR3_1704 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CR3_0776 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CR3_0828 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D CR3_0827 xdhB; xanthine dehydrogenase large subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D CR3_3751 aldehyde oxidase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D CR3_3147 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D CR3_4228 yagS; xanthine dehydrogenase YagS FAD-binding subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CR3_3752 yagS; xanthine dehydrogenase YagS FAD-binding subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CR3_3148 yagS; xanthine dehydrogenase YagS FAD-binding subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CR3_4227 coxS; carbon-monoxide dehydrogenase small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CR3_3753 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CR3_3149 coxS; carbon-monoxide dehydrogenase small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CR3_4394 mutT; NTP pyrophosphohydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D CR3_4391 guaA; glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CR3_1182 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CR3_0824 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CR3_0779 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CR3_2372 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CR3_1724 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CR3_2371 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CR3_2540 dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CR3_0781 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CR3_1751 ppx-gppA; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CR3_1040 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D CR3_1690 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CR3_3938 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CR3_2359 carbohydrate kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D CR3_3047 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CR3_0825 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D CR3_3748 cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CR3_2075 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CR3_3674 icc; putative phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CR3_0488 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D CR3_0514 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CR3_2175 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CR3_2176 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CR3_1449 trkA; trk system potassium uptake protein TrkA K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
D CR3_0820 hiuH; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D CR3_0816 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D CR3_3022 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D CR3_0276 hpxA; hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D CR3_3018 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D CR3_0275 putative xylanase/chitin deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5]
D CR3_0817 putative xylanase/chitin deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5]
D CR3_2748 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CR3_2501 allA; ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D CR3_0888 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CR3_0887 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CR3_0885 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:cgd00240]
D CR3_1766 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CR3_1768 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CR3_0485 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CR3_2983 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CR3_0397 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CR3_0486 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CR3_1594 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CR3_0129 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CR3_2341 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CR3_1159 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CR3_1704 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CR3_0740 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CR3_4394 mutT; NTP pyrophosphohydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D CR3_0964 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CR3_0695 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CR3_1712 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CR3_2252 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CR3_0748 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CR3_4083 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CR3_0484 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CR3_3748 cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CR3_4081 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CR3_0470 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CR3_2372 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CR3_1724 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CR3_2371 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CR3_1460 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CR3_2240 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CR3_1930 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CR3_3020 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CR3_3234 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CR3_3270 amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CR3_0933 rutE; malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cgd00250]
D CR3_2228 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CR3_3203 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CR3_3255 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CR3_1081 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CR3_3601 beta-aspartyl-peptidase (threonine type) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CR3_4545 aspQ; glutamin-(asparagin-)ase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D CR3_4563 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CR3_1094 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CR3_2253 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CR3_4312 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_0474 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_3201 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_1690 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CR3_3938 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CR3_2308 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CR3_0485 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_3596 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3230 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3150 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_0540 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_2538 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CR3_2537 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CR3_1623 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CR3_0389 gdhA; glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CR3_4141 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CR3_3767 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CR3_2795 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CR3_1766 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CR3_1768 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CR3_0171 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CR3_1888 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cgd00260]
D CR3_1006 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CR3_1897 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CR3_1095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CR3_1974 thrB2; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D CR3_3367 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CR3_1096 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CR3_1982 ltaE; threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CR3_0555 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CR3_0092 ghrA; 6-phosphogluconate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CR3_1876 ldhA; 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CR3_2756 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0396 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CR3_0252 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_0410 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_4203 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_3437 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_0689 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CR3_1561 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CR3_2787 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CR3_2785 gcvT; aminomethyltransferase (glycine cleavage system tprotein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_2786 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CR3_0849 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CR3_2789 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CR3_0343 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CR3_3515 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CR3_1946 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CR3_1892 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CR3_1894 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cgd00270]
D CR3_0997 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CR3_1445 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CR3_0059 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_0060 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_4048 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CR3_0135 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CR3_2332 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CR3_2477 mtn; S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CR3_1573 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CR3_3024 hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CR3_0937 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3642 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_0156 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CR3_1006 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CR3_1897 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CR3_1095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CR3_0123 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CR3_0806 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CR3_1021 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CR3_1887 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CR3_2117 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CR3_0242 gshA; glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CR3_0243 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CR3_1967 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CR3_4002 ldh; malate/L-lactate dehydrogenase family protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CR3_0183 slcC; 3-phosphoglycerate dehydrogenase K16843 slcC; (S)-sulfolactate dehydrogenase [EC:1.1.1.310]
D CR3_1909 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CR3_0184 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]
D CR3_0181 suyA; D-galactarate dehydratase/Altronate hydrolase K16845 suyA; (2R)-sulfolactate sulfo-lyase subunit alpha [EC:4.4.1.24]
D CR3_0182 suyB; altronate dehydratase K16846 suyB; (2R)-sulfolactate sulfo-lyase subunit beta [EC:4.4.1.24]
D CR3_2789 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CR3_0705 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CR3_4203 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_3437 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_0689 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cgd00280]
D CR3_2117 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_0081 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CR3_3895 caiA; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_1009 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_0891 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_4505 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_3108 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_1771 acd; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CR3_0076 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0379 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CR3_3800 bccA; Acetyl/propionyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CR3_3501 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CR3_4094 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CR3_3344 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_3502 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_0434 matB; malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D CR3_0211 beta alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_0091 methylcrotonoyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D CR3_0085 carboxyltransferase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D CR3_0087 liuC; methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D CR3_1718 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_0093 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_3927 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_1034 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CR3_1035 acetyl-CoA:acetoacetyl-CoA transferase, subunit beta K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CR3_0539 acsA; acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cgd00290]
D CR3_0343 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CR3_1900 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_2065 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3032 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3198 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CR3_1899 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3031 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CR3_3199 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CR3_1898 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CR3_0845 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3550 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3232 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_0846 ilvN; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CR3_0847 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CR3_0421 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CR3_0422 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CR3_2117 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CR3_1094 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CR3_0851 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CR3_3048 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cgd00300]
D CR3_1095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CR3_1006 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CR3_1897 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CR3_1664 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CR3_0981 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CR3_3903 dapA; dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CR3_2488 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CR3_2326 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CR3_1147 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CR3_2216 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CR3_1148 dapC; N-succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CR3_1144 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CR3_0131 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CR3_2548 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CR3_1925 glutathione S-transferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CR3_2413 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CR3_2412 murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cgd00310]
D CR3_2485 putA; NAD-dependent aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D CR3_1654 sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_0571 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_3596 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3230 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3150 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_0540 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_0614 frc; formyl-CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D CR3_3897 caiB; putative acyl-CoA transferase/carnitine dehydratase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D CR3_4372 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CR3_1815 dadA; D-amino acid dehydrogenase small subunit K26064 amaD; D-lysine oxidase
D CR3_2832 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cgd00220]
D CR3_2254 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CR3_2253 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CR3_4312 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_0474 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_3201 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_0418 arg; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CR3_2040 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D CR3_3919 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D CR3_0888 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CR3_0887 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CR3_0885 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CR3_4545 aspQ; glutamin-(asparagin-)ase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D CR3_1766 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CR3_1768 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CR3_1623 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CR3_0389 gdhA; glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CR3_4141 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CR3_1094 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CR3_1679 argAB; amino acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D CR3_2398 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CR3_0120 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CR3_0127 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CR3_3177 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CR3_2216 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CR3_1553 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D CR3_3224 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:cgd00330]
D CR3_4081 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CR3_0471 arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D CR3_2332 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_0807 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1812 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_0007 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3707 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3852 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1277 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_2196 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3236 putA; NAD-dependent aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D CR3_1272 hcaD; (2Fe-2S)-binding protein K24954 ooxA; octopine oxidase subunit A
D CR3_1270 dadA; FAD-dependent oxidoreductase K24955 ooxB; octopine oxidase subunit B
D CR3_2040 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D CR3_0418 arg; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CR3_2289 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CR3_2795 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CR3_2039 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D CR3_3767 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CR3_2383 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CR3_2322 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CR3_3842 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CR3_1425 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CR3_4372 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CR3_2832 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:cgd00340]
D CR3_2526 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CR3_1691 hisZ; ATP phosphoribosyltransferase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CR3_2518 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CR3_2519 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CR3_2521 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CR3_2522 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CR3_2520 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CR3_2523 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CR3_2524 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0691 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_3097 suhB; histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CR3_2525 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CR3_2209 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CR3_2208 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CR3_2206 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CR3_2205 hutF; N-formimino-L-glutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D CR3_2204 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1928 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:cgd00350]
D CR3_2524 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0691 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0937 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3642 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3640 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CR3_4108 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CR3_0284 nagL; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D CR3_4107 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_3548 hpcD; 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D CR3_3597 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D CR3_3857 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D CR3_3596 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3230 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3150 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_0540 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_1668 nagK; fumarylacetoacetat hydroxylase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D CR3_0283 nagK; fumarylacetoacetat hydroxylase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D CR3_3549 ybiC; dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:cgd00360]
D CR3_2837 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CR3_2440 paaK; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CR3_2439 paaI; phenylacetic acid degradation-related protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CR3_2614 paaA; phenylacetate-CoA oxygenase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D CR3_2615 phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D CR3_2616 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D CR3_2617 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CR3_1184 caiD; enoyl-CoA hydratase/carnithine racemase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CR3_2438 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0899 fadB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CR3_0216 fadB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CR3_2524 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0691 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0937 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3642 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3640 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CR3_0632 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_0715 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_1522 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_3683 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_4552 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_4372 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CR3_3549 ybiC; dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D CR3_0807 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1812 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_0007 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3707 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3852 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1277 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_2196 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_4109 mhpA; FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D CR3_3181 mhpA; FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:cgd00380]
D CR3_0573 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D CR3_3935 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CR3_3941 aes; Esterase/lipase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CR3_0575 kynB; metal-dependent hydrolase/cyclase K07130 kynB; arylformamidase [EC:3.5.1.9]
D CR3_0574 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D CR3_1654 sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_0571 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_0807 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1812 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_0007 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3707 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3852 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1277 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_2196 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_2292 cAT; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cgd00400]
D CR3_0915 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CR3_2541 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CR3_2354 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CR3_2345 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CR3_2542 aroL; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CR3_0693 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CR3_1024 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CR3_2446 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CR3_2451 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CR3_2452 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CR3_1895 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CR3_2453 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CR3_1892 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CR3_1894 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CR3_0690 pheA; prephenate dehydratase, chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CR3_0692 tyrA2; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CR3_2524 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0691 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0937 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3642 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_2837 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cgd00410]
D CR3_2314 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_0453 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CR3_3020 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CR3_3234 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CR3_3270 amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CR3_0211 beta alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0081 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CR3_0431 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D CR3_3344 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CR3_3502 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:cgd00430]
D CR3_2078 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_3143 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4007 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4037 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_0605 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_1623 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CR3_4161 SnoaL-like domain containing protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-]
D CR3_4162 dadA; FAD-dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]
D CR3_4159 xsc; sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D CR3_4155 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00440 Phosphonate and phosphinate metabolism [PATH:cgd00440]
D CR3_4144 phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
D CR3_4143 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D CR3_4149 phnW; 2-aminoethylphosphonate-pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CR3_3890 phnI; carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D CR3_3888 phnG; carbon-phosphorus lyase complex subunit K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D CR3_3889 phnH; carbon-phosphorus lyase complex subunit K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D CR3_3893 phnL; carbon-phosphorus lyase complex subunit K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D CR3_3894 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D CR3_3891 phnJ; carbon-phosphorus lyase complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:cgd00450]
D CR3_1445 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CR3_0059 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_0060 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_4048 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CR3_0975 trxB; thioredoxin reductase oxidoreductase protein TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CR3_1881 trxB; thioredoxin reductase oxidoreductase protein TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CR3_0620 trxB; thioredoxin reductase oxidoreductase protein TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CR3_2175 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CR3_2176 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CR3_0458 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cgd00460]
D CR3_4396 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CR3_2078 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_3143 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4007 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4037 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_0605 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_3255 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CR3_1081 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CR3_3601 beta-aspartyl-peptidase (threonine type) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CR3_0555 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cgd00470]
D CR3_1135 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CR3_4372 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CR3_2406 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CR3_4545 aspQ; glutamin-(asparagin-)ase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D CR3_1828 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CR3_2410 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CR3_3203 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CR3_3515 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CR3_1946 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CR3_3495 alanine racemase K19967 dta; D-threonine aldolase [EC:4.1.2.42]
D CR3_0131 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CR3_2548 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CR3_3976 aldH; 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CR3_0768 aldH; 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CR3_0632 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_0715 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_1522 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_3683 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CR3_4552 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:cgd00480]
D CR3_2078 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_3143 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4007 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4037 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_0605 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_0594 chaC; cation transport ChaC-like protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D CR3_1516 oplAH; 5-oxoprolinase (ATP-hydrolysing) K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D CR3_0042 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CR3_3802 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CR3_0040 ybgJ; putative allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D CR3_0041 ybgK; allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D CR3_2792 ybdK; gamma-glutamyl:cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CR3_0242 gshA; glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CR3_0243 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CR3_0415 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CR3_0811 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CR3_0163 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_0900 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_3278 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_4489 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_2309 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_2881 gor; glutathione reductase (NADPH) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CR3_2246 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CR3_4558 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CR3_2900 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CR3_2287 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CR3_4368 peroxiredoxin/glutaredoxin, Thioredoxin reductase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D CR3_2402 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D CR3_2332 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CR3_2949 manB; beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:cgd00540]
D CR3_1169 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CR3_2401 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CR3_1167 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CR3_0998 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CR3_1170 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CR3_2072 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CR3_2037 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CR3_0312 kpsF; sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CR3_0965 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CR3_2074 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CR3_0522 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CR3_0132 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CR3_0133 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CR3_0134 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CR3_0790 lpxO; aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D CR3_1310 eptA; sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CR3_1335 eptA; sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CR3_0209 deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D CR3_3526 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D CR3_0701 rfaE; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D CR3_2151 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CR3_3415 hisB; histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CR3_0049 rfaE; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D CR3_0702 gmhD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CR3_1783 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CR3_0521 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CR3_2119 waaF; ADP-heptose-LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CR3_0732 waaL; polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cgd00541]
D CR3_1980 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CR3_4440 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CR3_2962 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CR3_0700 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CR3_0491 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CR3_0489 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CR3_0492 rfbC; dtdp-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CR3_0490 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CR3_3397 ddhD; CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CR3_2215 ascD; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CR3_2973 rfbA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CR3_0493 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CR3_2972 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CR3_2967 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CR3_0170 glmU; glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CR3_0498 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:cgd00550]
D CR3_2527 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CR3_3973 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CR3_2250 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CR3_2407 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CR3_2410 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CR3_2413 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CR3_2406 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CR3_2412 murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CR3_1161 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CR3_0534 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CR3_2411 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CR3_2408 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CR3_2344 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CR3_2546 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CR3_0023 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CR3_2414 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CR3_0228 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CR3_2103 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:cgd00552]
D CR3_0534 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cgd00543]
D CR3_2966 wcaI; colanic acid biosynthesis glycosyl transferase WcaI K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D CR3_2964 wcaF; colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D CR3_2448 pgaC; N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D CR3_2447 hypothetical protein K11937 pgaD; biofilm PGA synthesis protein PgaD
D CR3_0997 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cgd00730]
D CR3_0142 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CR3_0155 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CR3_0942 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CR3_0143 ccdA; cytochrome C biogenesis protein CcdA K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CR3_1963 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CR3_0145 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CR3_0146 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CR3_2339 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CR3_1938 rsgA; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CR3_2075 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cgd00740]
D CR3_3557 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CR3_0546 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CR3_0548 ribD; multifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CR3_3527 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D CR3_0545 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CR3_0547 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CR3_2236 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CR3_3962 ssuE; NADPH-dependent FMN reductase oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CR3_2484 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cgd00750]
D CR3_0585 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CR3_0689 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CR3_1847 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CR3_3367 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CR3_1096 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cgd00760]
D CR3_2228 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CR3_2230 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CR3_2229 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CR3_1879 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CR3_1712 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CR3_0743 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CR3_0617 nadE; NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CR3_3429 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CR3_1481 pncA; nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CR3_1683 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CR3_0923 NAD(+)/NADH kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CR3_2313 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CR3_2316 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CR3_2317 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D CR3_3011 nicA; ferredoxin:(2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D CR3_3004 coxL; carbon-monoxide dehydrogenase large subunit K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D CR3_3010 nicC; salicylate 1-monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114]
D CR3_0803 ampS; peptidase M29 family K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D CR3_3007 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D CR3_0579 ampS; peptidase M29 family K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D CR3_3008 nicD; alpha/beta hydrolase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D CR3_3006 nicF; N-carbamoylsarcosine amidase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D CR3_3009 nicE; maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D CR3_3596 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3230 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_3150 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CR3_0540 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cgd00770]
D CR3_0845 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3550 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_3232 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CR3_0846 ilvN; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CR3_0847 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CR3_0421 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CR3_0422 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CR3_2270 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CR3_4134 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CR3_0453 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CR3_0048 coaX; pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CR3_2239 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CR3_0289 kdtB; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CR3_2393 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CR3_1846 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CR3_3306 acpT; 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CR3_2117 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CR3_3020 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CR3_3234 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CR3_3270 amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CR3_2314 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cgd00780]
D CR3_0260 bioC; malonyl-CoA O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CR3_4104 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CR3_1857 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CR3_1216 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_0750 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1859 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3291 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3732 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3932 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_2348 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4096 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1168 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CR3_1743 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CR3_0088 bioF; aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CR3_0089 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CR3_0090 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CR3_0047 birA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cgd00785]
D CR3_0035 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CR3_0036 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CR3_3101 lplA; biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1610 aceE; pyruvate dehydrogenase subunit E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CR3_1609 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CR3_1655 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CR3_1654 sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CR3_2787 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CR3_2785 gcvT; aminomethyltransferase (glycine cleavage system tprotein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CR3_2786 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cgd00790]
D CR3_2993 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CR3_1962 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D CR3_4370 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CR3_3608 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CR3_1515 phoD; metallophosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CR3_0370 ntpA; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D CR3_0167 folB; diguanylate cyclase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CR3_2268 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CR3_1760 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CR3_1931 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CR3_1890 folC; folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CR3_3557 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CR3_0546 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CR3_2273 pabBC; aminodeoxychorismate synthase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CR3_1227 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CR3_2838 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CR3_2837 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CR3_1226 nrdG; organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CR3_0563 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CR3_0342 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CR3_1872 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CR3_2123 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CR3_1934 mogA; molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CR3_1874 moaA; molybdenum cofactor biosynthesis protein A K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CR3_1097 moeA; molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CR3_0349 mocA; molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CR3_1873 mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cgd00670]
D CR3_1931 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CR3_1613 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CR3_0555 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CR3_2233 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CR3_2168 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CR3_2862 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CR3_2785 gcvT; aminomethyltransferase (glycine cleavage system tprotein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CR3_0059 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_0060 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_1930 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CR3_1791 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CR3_0158 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CR3_0160 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cgd00860]
D CR3_1736 earS; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CR3_2479 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CR3_1993 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CR3_2555 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CR3_0478 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CR3_2797 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CR3_0744 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CR3_2783 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CR3_2321 membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CR3_0925 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CR3_0479 hemDX; uroporphyrinogen III methyltransferase / synthase K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CR3_2174 cobA; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CR3_0272 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D CR3_0413 cbiX; sirohydrochlorin cobaltochelatase cobalamin biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CR3_4158 cobS; cobaltochelatase CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D CR3_4157 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D CR3_2277 btuR; cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CR3_0443 btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CR3_0451 cbiP; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CR3_1940 cobD; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CR3_0449 cobD; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CR3_0448 hisC; threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D CR3_0450 cobP; adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CR3_0445 cobV; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CR3_0444 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CR3_0446 cobC; alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CR3_0070 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D CR3_0248 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cgd00130]
D CR3_1769 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D CR3_2349 ubiC; chorismate-pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D CR3_2290 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CR3_0541 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CR3_2484 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CR3_0685 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CR3_2165 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D CR3_0362 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CR3_2418 ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D CR3_3946 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CR3_3174 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CR3_1018 wrbA; Trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CR3_3640 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cgd00900]
D CR3_1963 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CR3_1163 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CR3_1551 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CR3_0297 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CR3_1550 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CR3_1700 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CR3_3473 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CR3_2223 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_3190 mvaA; hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D CR3_2484 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CR3_1964 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CR3_2388 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CR3_1161 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CR3_1937 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:cgd00909]
D CR3_3463 shc; squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cgd00906]
D CR3_1543 crtB; phytoene synthetase, trans-isoprenyl diphosphate synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:cgd00907]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_1718 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_0093 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_3927 hmgL; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CR3_0379 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CR3_2331 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cgd00523]
D CR3_0491 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CR3_0489 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CR3_0492 rfbC; dtdp-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CR3_0490 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:cgd01054]
D CR3_3203 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:cgd01055]
D CR3_3245 glcD; glycolate oxidase subunit, FAD-linked K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CR3_0489 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cgd00946]
D CR3_4396 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CR3_1232 acyl-homoserine lactone acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D CR3_3945 PbsX family transcriptional regulator K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:cgd00332]
D CR3_2383 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CR3_2322 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cgd00261]
D CR3_3245 glcD; glycolate oxidase subunit, FAD-linked K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CR3_3308 mbtH; antibiotic synthesis protein MbtH K05375 mbtH; MbtH protein
D CR3_2175 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CR3_2176 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CR3_1006 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CR3_1897 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CR3_1664 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CR3_0981 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CR3_3903 dapA; dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CR3_2488 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CR3_2326 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cgd00521]
D CR3_0520 pmm-pgm; bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CR3_0995 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CR3_0491 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CR3_0489 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CR3_0492 rfbC; dtdp-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CR3_0490 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:cgd00525]
D CR3_0491 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CR3_0489 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cgd00401]
D CR3_0692 tyrA2; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CR3_2524 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0691 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0937 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3642 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:cgd00405]
D CR3_2101 ubiH; 2-polyprenyl-6-methoxyphenol hydroxylase-related FAD-dependent oxidoreductase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D CR3_2446 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CR3_2451 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CR3_1860 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CR3_1216 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_0750 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1859 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3291 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3732 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3932 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_2348 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4096 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1743 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CR3_1858 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CR3_4097 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cgd00999]
D CR3_0135 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CR3_2345 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CR3_4396 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D CR3_3310 rimL; Acetyltransferase, including N-acetylase of ribosomal proteins K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cgd00362]
D CR3_3275 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D CR3_3617 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D CR3_0056 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CR3_3618 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CR3_3028 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CR3_4450 pcaI; 3-oxoadipate CoA-transferase subunit a (beta-ketoadipate:succinyl-CoA transferase subunit a) K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D CR3_4449 pcaJ; 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D CR3_0379 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CR3_4448 fadA; acetyl-CoA acyltransferase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D CR3_3493 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CR3_1983 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CR3_2773 chqB; hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D CR3_2774 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D CR3_4399 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D CR3_3775 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CR3_3969 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CR3_0947 fdx; ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D CR3_1769 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D CR3_1586 badA; 4-hydroxybenzoate-CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D CR3_3376 badA; 4-hydroxybenzoate-CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D CR3_3304 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_1482 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_0378 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CR3_0571 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_0899 fadB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CR3_0216 fadB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_3380 boxA; benzoyl-CoA oxygenase K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208]
D CR3_3379 boxB; benzoyl-CoA oxygenase subunit B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D CR3_3377 putA; NAD-dependent aldehyde dehydrogenase K15514 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77]
D CR3_3378 boxC; benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:cgd00627]
D CR3_0807 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1812 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_0007 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3707 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3852 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1277 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_2196 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1586 badA; 4-hydroxybenzoate-CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D CR3_3376 badA; 4-hydroxybenzoate-CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D CR3_2484 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CR3_1770 abmG; 2-aminobenzoate-CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D CR3_1773 salicylyl-CoA 5-hydroxylase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CR3_1672 glnA; glutamine synthetase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:cgd00364]
D CR3_4462 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CR3_1970 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CR3_3275 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D CR3_2774 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:cgd00625]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_1231 betB; betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1990 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_4330 putA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CR3_1418 exaA; Quinoprotein ethanol dehydrogenase precursor K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CR3_1253 dehH; haloacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D CR3_1125 HAD superfamily hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cgd00361]
D CR3_4462 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CR3_1970 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CR3_2774 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D CR3_2773 chqB; hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D CR3_3275 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D CR3_1125 HAD superfamily hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CR3_1253 dehH; haloacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:cgd00623]
D CR3_3275 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D CR3_4462 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CR3_1970 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CR3_2774 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation
D CR3_3493 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CR3_1983 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:cgd00633]
D CR3_2202 nfnB; nitroreductase / dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
C 00642 Ethylbenzene degradation
D CR3_0379 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:cgd00643]
D CR3_4108 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CR3_0284 nagL; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D CR3_4107 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CR3_0807 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1812 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_0007 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3707 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_3852 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1277 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_2196 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CR3_1948 pct; CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation [PATH:cgd00791]
D CR3_3919 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D CR3_0888 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CR3_0887 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CR3_0885 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:cgd00930]
D CR3_4201 SMP-30/gluconolaconase/LRE domain-containing protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CR3_3611 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D CR3_2437 echA; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CR3_3493 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CR3_1983 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:cgd00626]
D CR3_3508 adhC; alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CR3_4536 adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
D CR3_1220 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16875 hmfG; 2,5-furandicarboxylate decarboxylase 2
C 00984 Steroid degradation [PATH:cgd00984]
D CR3_2920 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D CR3_0799 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cgd03020]
D CR3_2593 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CR3_2592 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CR3_2560 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CR3_0780 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cgd03010]
D CR3_0696 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CR3_1157 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CR3_2579 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CR3_2561 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CR3_2568 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CR3_1082 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CR3_2589 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CR3_2571 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CR3_0401 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CR3_2586 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CR3_2562 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CR3_2590 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CR3_2563 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CR3_2572 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CR3_0854 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CR3_0724 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CR3_2576 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CR3_1084 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CR3_2581 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CR3_2256 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CR3_1883 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CR3_1959 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CR3_2596 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CR3_2582 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CR3_2585 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CR3_2584 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CR3_2573 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CR3_2570 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CR3_2594 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CR3_1085 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CR3_2595 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CR3_2597 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CR3_0400 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CR3_2575 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CR3_2566 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CR3_2578 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CR3_2559 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CR3_2569 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CR3_0727 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CR3_1045 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CR3_2386 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CR3_2580 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CR3_2583 rplW; ribosomal L23 family protein K02892 RP-L23; large subunit ribosomal protein L23
D CR3_2574 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CR3_0294 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CR3_2385 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CR3_2226 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CR3_2577 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CR3_2567 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CR3_1730 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CR3_1863 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CR3_2227 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CR3_0002 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CR3_1044 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CR3_1239 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_4478 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_2609 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_2436 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_1242 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_4475 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_2606 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_2433 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_1243 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_2605 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_4474 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_2432 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cgd00970]
D CR3_1735 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_1241 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_2434 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_4476 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_2607 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_2724 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_0783 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_4079 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_2781 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_0644 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_1746 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_1882 trnA; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CR3_1529 trnA; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CR3_4334 trnA; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CR3_1733 trnA; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CR3_1838 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CR3_0207 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CR3_0296 trnG; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CR3_1734 trnG; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CR3_4333 trnG; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CR3_1839 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_1840 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_2603 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_0537 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_1066 trnH; tRNA-His K14226 tRNA-His; tRNA His
D CR3_1240 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_2608 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_4477 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_2435 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_4080 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_0859 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1539 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_2186 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1686 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1835 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1618 trnL; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CR3_1621 trnL; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CR3_0565 trnL; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CR3_2136 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_0786 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_1590 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_1955 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_2855 trnP; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CR3_2389 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CR3_1050 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CR3_1747 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CR3_1007 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_0773 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_0629 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_1808 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_0808 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CR3_2504 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CR3_2602 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CR3_2600 trnT; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CR3_2604 trnT; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CR3_1041 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_4379 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_1780 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_1530 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_1736 earS; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CR3_4387 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_0028 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_3019 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_1518 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_0030 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CR3_0027 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CR3_0599 glnS; glutamyl-trna synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CR3_0615 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CR3_0368 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CR3_2149 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CR3_2150 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CR3_1042 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CR3_0628 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CR3_1002 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CR3_0458 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CR3_2862 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CR3_1978 valS; tRNA synthetases class I family protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CR3_2325 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CR3_2237 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CR3_0949 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CR3_2380 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CR3_1699 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CR3_1046 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CR3_1047 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CR3_0408 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CR3_0979 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CR3_1267 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cgd03060]
D CR3_2565 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CR3_2599 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CR3_0858 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CR3_2299 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CR3_2300 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CR3_2298 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CR3_0004 yidC; YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CR3_2399 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CR3_0255 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CR3_2376 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CR3_0285 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CR3_2515 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D CR3_2514 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CR3_1851 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CR3_1341 pbrB_C; lipoprotein signal peptidase involved in Pb(II) resistance PbrB/C K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CR3_2238 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cgd04122]
D CR3_0942 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CR3_1967 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CR3_2311 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CR3_1872 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CR3_2850 hypothetical protein K03636 moaD; sulfur-carrier protein
D CR3_1098 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D CR3_0250 moeB; sulfur carrier protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CR3_2123 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CR3_1934 mogA; molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CR3_0144 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:cgd03018]
D CR3_2381 nudH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CR3_1871 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CR3_0967 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CR3_0855 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CR3_1944 srmB; Superfamily II DNA and RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CR3_2142 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CR3_1685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CR3_4235 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CR3_2591 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CR3_1728 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CR3_2276 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CR3_2014 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CR3_1695 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CR3_2062 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CR3_2267 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cgd03030]
D CR3_1779 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_4479 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_0730 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CR3_1723 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CR3_1459 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CR3_2323 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CR3_0416 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CR3_2935 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CR3_4302 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CR3_1086 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CR3_1957 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CR3_0318 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CR3_1778 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CR3_1171 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CR3_1972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CR3_1152 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cgd03410]
D CR3_0934 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CR3_2455 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CR3_0301 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CR3_0300 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CR3_1003 alkA; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CR3_3092 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CR3_2643 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CR3_1132 dpo; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CR3_3812 dpo; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CR3_1615 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CR3_4378 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CR3_0128 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CR3_1972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CR3_0953 recJ; single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CR3_1152 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cgd03420]
D CR3_1552 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CR3_0316 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CR3_0335 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CR3_0938 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CR3_1842 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CR3_0231 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CR3_1976 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CR3_1972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CR3_1152 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cgd03430]
D CR3_0987 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CR3_2260 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CR3_0231 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CR3_1976 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CR3_2069 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CR3_1965 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CR3_0953 recJ; single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CR3_0318 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CR3_0730 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CR3_2935 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CR3_1723 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CR3_2323 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CR3_1459 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CR3_1779 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_4479 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_0416 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CR3_1152 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cgd03440]
D CR3_0953 recJ; single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CR3_0318 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CR3_1848 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CR3_1721 recR; recombinational DNA repair protein (RecF pathway) K06187 recR; recombination protein RecR
D CR3_2131 recA; recombinase RecA K03553 recA; recombination protein RecA
D CR3_1972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CR3_2171 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CR3_2172 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CR3_2169 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CR3_2295 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CR3_0730 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CR3_2935 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CR3_1723 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CR3_2323 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CR3_1459 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CR3_1779 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_4479 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_0416 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CR3_2796 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CR3_1083 priB; restart primosome assembly protein PriB K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:cgd03450]
D CR3_4455 hypothetical protein K10979 ku; DNA end-binding protein Ku
D CR3_3647 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D CR3_4453 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cgd03250]
D CR3_1000 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cgd02010]
D CR3_1115 cysU; sulfate transport system permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D CR3_1116 cysW; sulfate transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D CR3_1117 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CR3_0830 tupB; ABC transporter periplasmic protein K05772 tupA; tungstate transport system substrate-binding protein
D CR3_2271 tupA; ABC transporter permease K05773 tupB; tungstate transport system permease protein
D CR3_2272 tupC; ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CR3_0281 nrtA; nitrate/nitrite transport system substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CR3_4154 tauA; taurine transport system substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D CR3_4152 tauC; TauT family ABC transporter permease K15552 tauC; taurine transport system permease protein
D CR3_4153 tauB; TauT family ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CR3_3960 ssuA; sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3965 ssuA; sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3578 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_1716 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3723 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3579 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_3725 tauC; TauT family ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_1714 tauC; TauT family ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_3963 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3724 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3580 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_1715 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_2049 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CR3_3777 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CR3_2050 modC; MolT family ABC transporter permease K02018 modB; molybdate transport system permease protein
D CR3_2051 modC; ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CR3_0623 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CR3_4146 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CR3_2888 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CR3_0625 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CR3_4148 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CR3_0626 fbpC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CR3_4147 afuC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CR3_0764 opuBC; substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CR3_1447 ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D CR3_0763 opuBB; glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CR3_0765 opuBB; glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CR3_0766 opuBA; glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CR3_3467 ttg2D; toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D CR3_2532 mlaC; phospholipid transport system substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CR3_0044 ABC transporter permease K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CR3_2534 ttg2B; ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CR3_0046 ttg2B; ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CR3_2531 NTP binding protein involved in toluene tolerance K07122 mlaB; phospholipid transport system transporter-binding protein
D CR3_2535 ttg2A; ABC-type transporter, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CR3_0045 ttg2A; ABC-type transporter, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CR3_0754 med; ABC transporter permease K07335 bmpA; basic membrane protein A and related proteins
D CR3_0756 ABC-type transporter, permease component K23535 nupB; general nucleoside transport system permease protein
D CR3_0755 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D CR3_0757 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D CR3_1784 glpV; glycerol transport system substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D CR3_1787 glpP; glycerol transport system permease protein K17322 glpP; glycerol transport system permease protein
D CR3_1786 glpQ; glycerol transport system permease protein K17323 glpQ; glycerol transport system permease protein
D CR3_1789 glpS; glycerol transport system ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D CR3_1788 glpT; glycerol transport system ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D CR3_1660 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CR3_1659 ugpA; ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CR3_1658 ugpE; sn-glycerol 3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CR3_1657 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CR3_1758 pstS; phosphate-binding periplasmic protein, ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CR3_1757 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CR3_1756 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein
D CR3_1755 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CR3_2658 phnD; phosphonate transport system substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CR3_3883 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CR3_2657 phosphate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D CR3_3884 PhnT family ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D CR3_2659 phnC; phosphonate transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CR3_3882 phnC; phosphonate transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CR3_0390 gltI; glutamate/aspartate ABC transporter permease GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CR3_0631 gltI; glutamate/aspartate transport system substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CR3_0392 gltK; glutamate/aspartate transport system permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D CR3_0391 gltJ; glutamate/aspartate transport system permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D CR3_0393 gltL; glutamate/aspartate transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CR3_0637 fliY; cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CR3_0638 hisM; ABC-type amino acid transport system, permease component K10009 tcyB; L-cystine transport system permease protein
D CR3_1585 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_4254 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_0853 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1487 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3265 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2794 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2819 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2823 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1102 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2988 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2998 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2183 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2222 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3058 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3157 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3994 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1584 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_1486 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3266 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2822 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2818 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_0220 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2999 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2221 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3057 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3159 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3995 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2817 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3996 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3158 livM; branched-chain amino acid transport system permease protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1583 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2821 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_0221 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1106 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2989 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2220 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_3056 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1485 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_3267 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1582 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1484 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3268 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2825 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_0219 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1103 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2990 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3000 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2219 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3055 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1581 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0801 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2816 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2824 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0222 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1104 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2991 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3001 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3054 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2218 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1483 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3269 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0711 metQ; D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CR3_3750 metQ; D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CR3_0710 abcD; D-methionine transport system permease MetI K02072 metI; D-methionine transport system permease protein
D CR3_0709 abcC; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D CR3_0879 urtA; urea transport system substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D CR3_0880 urtB; urea transport system permease protein K11960 urtB; urea transport system permease protein
D CR3_0881 urtC; urea transport system permease protein K11961 urtC; urea transport system permease protein
D CR3_0882 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D CR3_0883 urtE; urea transport system ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D CR3_3603 gsiB; glutathione transport system substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CR3_3604 gsiC; glutathione transport system permease protein K13890 gsiC; glutathione transport system permease protein
D CR3_3605 gsiD; glutathione transport system permease protein K13891 gsiD; glutathione transport system permease protein
D CR3_3602 gsiA; glutathione transport system ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CR3_1742 oppA; peptide ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D CR3_1741 ABC transporter permease K13894 yejB; microcin C transport system permease protein
D CR3_1740 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein
D CR3_1739 ABC transporter K13896 yejF; microcin C transport system ATP-binding protein
D CR3_2034 kpsE; Capsule polysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D CR3_2036 tagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K09688 kpsM; capsular polysaccharide transport system permease protein
D CR3_2035 tagH; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CR3_0494 tagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D CR3_0495 tagH; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CR3_1886 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein
D CR3_1885 nodI; lipooligosaccharide transport system ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D CR3_0955 ftsX; cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D CR3_0956 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CR3_0414 permease, yjgp/yjgq family protein K11720 lptG; lipopolysaccharide export system permease protein
D CR3_0309 lptB; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CR3_0734 msbA; lipida exportABC system K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CR3_0382 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CR3_1138 mdlB; ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D CR3_1821 lapB; peptidase C39 K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CR3_3317 pvdE; cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D CR3_0360 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cgd02060]
D CR3_0246 ptsI; phosphotransferase system, enzyme I, PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CR3_0245 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CR3_0244 pts system fructose iia component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CR3_0306 phosphotransferase system mannitol/fructose-specific IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cgd03070]
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_3692 yscC; type III secretion protein C K03219 yscC; type III secretion protein C
D CR3_4060 yscC; type III secretion protein C K03219 yscC; type III secretion protein C
D CR3_3695 yscJ; type III secretion protein J K03222 yscJ; type III secretion protein J
D CR3_4072 yscJ; type III secretion protein J K03222 yscJ; type III secretion protein J
D CR3_3689 yscR; type III secretion protein R K03226 yscR; type III secretion protein R
D CR3_4065 yscR; type III secretion protein R K03226 yscR; type III secretion protein R
D CR3_3691 type III secretion system protein SctS K03227 yscS; type III secretion protein S
D CR3_4064 escS; type III secretion system apparatus protein K03227 yscS; type III secretion protein S
D CR3_3699 yscT; type III secretion protein T K03228 yscT; type III secretion protein T
D CR3_4063 yscT; type III secretion protein T K03228 yscT; type III secretion protein T
D CR3_3700 yscU; type III secretion protein U K03229 yscU; type III secretion protein U
D CR3_4062 yscU; type III secretion protein U K03229 yscU; type III secretion protein U
D CR3_3690 yscV; type III secretion protein V K03230 yscV; type III secretion protein V
D CR3_4068 yscV; type III secretion protein V K03230 yscV; type III secretion protein V
D CR3_3697 yscN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CR3_4067 yscN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CR3_3696 yscL; type III secretion protein K03223 yscL; type III secretion protein L
D CR3_2634 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D CR3_2626 gspC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D CR3_2636 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D CR3_2627 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D CR3_2628 gspH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D CR3_2629 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D CR3_2630 gspJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D CR3_2631 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D CR3_2632 gspM; general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D CR3_2635 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CR3_2299 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CR3_2300 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CR3_2599 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CR3_0858 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CR3_2565 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CR3_2298 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CR3_0004 yidC; YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CR3_2399 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CR3_0285 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CR3_0255 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CR3_2376 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CR3_2515 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D CR3_2514 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CR3_1502 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D CR3_1510 impL; type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cgd02020]
D CR3_1752 phoR; sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CR3_1753 phoB; DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CR3_4370 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CR3_3608 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CR3_1515 phoD; metallophosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CR3_1758 pstS; phosphate-binding periplasmic protein, ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CR3_1546 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CR3_2091 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CR3_1545 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CR3_2092 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CR3_4185 cpxR; two-component system, OmpR family, response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D CR3_3807 degQ; Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_1853 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_4472 periplasmic protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_0652 creC; sensor histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CR3_0651 creB; response regulator protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D CR3_2093 mdtA; membrane fusion protein, multidrug efflux system K07799 mdtA; membrane fusion protein, multidrug efflux system
D CR3_2094 mdtB; multidrug efflux pump K07788 mdtB; multidrug efflux pump
D CR3_2095 mdtC; multidrug efflux pump K07789 mdtC; multidrug efflux pump
D CR3_0172 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_3546 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1323 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1357 czcS; heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1380 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_0173 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_3545 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1322 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1356 czcR; winged helix family two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1379 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1306 cusB; Cu(I)/Ag(I) efflux system membrane protein CusB/SilB K07798 cusB; membrane fusion protein, copper/silver efflux system
D CR3_1305 cusA; Cu(I)/Ag(I) efflux system membrane protein CusA/SilA K07787 cusA; copper/silver efflux system protein
D CR3_4434 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D CR3_4433 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CR3_3217 fliC; flagellin K02406 fliC; flagellin
D CR3_4417 fliA; sigma-70 region 4 K02405 fliA; RNA polymerase sigma factor FliA
D CR3_4432 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CR3_0328 kdpD; histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CR3_0326 kdpA; potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CR3_0327 kdpB; potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CR3_2886 tctE; two-component system, OmpR family, sensor histidine kinase TctE K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CR3_3783 tctE; two-component system, OmpR family, sensor histidine kinase TctE K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CR3_2887 tctD; transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D CR3_3782 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07774 tctD; two-component system, OmpR family, response regulator TctD
D CR3_0762 tricarboxylate transporter K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_2915 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_3152 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_0608 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_3778 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_3188 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_0761 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_2884 ripartite tricarboxylate transport (TTT) family transport protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_3779 membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_2916 transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_3151 membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_0760 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_2885 periplasmic tricarboxylate binding receptor (TctC) K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_3780 tricarboxylic transport membrane protein K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_4130 extra-cytoplasmic solute receptor K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_0272 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D CR3_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CR3_1910 citE; citrate lyase subunit beta / citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CR3_0429 citE; citrate lyase subunit beta / citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CR3_4328 citB; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CR3_3124 rcsB; LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CR3_3125 evgS; two-component system, NarL family, sensor histidine kinase EvgS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CR3_4078 ampC; beta-lactamase class C K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D CR3_0823 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D CR3_2002 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CR3_2003 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CR3_3330 cpaB; pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D CR3_2006 cpaB; pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D CR3_2007 cpaC; pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D CR3_3332 cpaE; pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CR3_2009 cpaE; pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CR3_3333 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CR3_2010 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CR3_3334 tadB; tight adherence protein B K12510 tadB; tight adherence protein B
D CR3_2011 tadB; tight adherence protein B K12510 tadB; tight adherence protein B
D CR3_3335 tadC; type II secretion system protein K12511 tadC; tight adherence protein C
D CR3_2012 tadC; type II secretion system protein K12511 tadC; tight adherence protein C
D CR3_3336 tadD; Flp pilus assembly protein, contains TPR repeats K27079 tadD; tight adherence protein D
D CR3_3337 membrane protein K27080 tadG; tight adherence protein G
D CR3_1155 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CR3_0618 glnB; nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D CR3_1670 ntrB; NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CR3_1669 cheY; chemotaxis protein CheY K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CR3_2857 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CR3_2856 atoC; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CR3_3614 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D CR3_3768 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_2852 dctB; histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CR3_3587 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CR3_2851 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CR3_3589 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CR3_2749 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CR3_0308 rpoN; RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D CR3_2125 pilA; major pilin subunit K02650 pilA; type IV pilus assembly protein PilA
D CR3_2646 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CR3_4428 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CR3_4436 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_0019 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_4222 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3554 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_1901 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_4544 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3949 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3273 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_1060 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CR3_4437 aer; methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D CR3_4429 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CR3_4438 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CR3_4430 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CR3_4425 cheY; response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CR3_2647 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_4426 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_3408 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CR3_1031 dctQ; TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CR3_1521 dctQ; TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CR3_4051 ssrB; two component system sensor kinase SsrB K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D CR3_2028 dctB; histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D CR3_2029 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD K17061 aauR; two-component system, response regulator AauR
D CR3_0393 gltL; glutamate/aspartate transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CR3_0392 gltK; glutamate/aspartate transport system permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D CR3_0391 gltJ; glutamate/aspartate transport system permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D CR3_0390 gltI; glutamate/aspartate ABC transporter permease GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CR3_0631 gltI; glutamate/aspartate transport system substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CR3_4545 aspQ; glutamin-(asparagin-)ase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D CR3_0217 crp; Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CR3_3541 crp; Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CR3_0116 regB; two-component system, sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CR3_3288 regB; two-component system, sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CR3_0115 regA; response regulator, rega/prra/actr family (chey-like receiver domain + fis-type hth domain) K15012 regA; two-component system, response regulator RegA
D CR3_3289 regA; response regulator, rega/prra/actr family (chey-like receiver domain + fis-type hth domain) K15012 regA; two-component system, response regulator RegA
D CR3_2509 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CR3_2508 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CR3_2507 ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CR3_2732 cytochrome C K08738 CYC; cytochrome c
D CR3_1419 cytochrome c551/c552 K08738 CYC; cytochrome c
D CR3_1649 ccoN; cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CR3_1648 ccoO; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CR3_1647 ccoQ; Cbb3-type cytochrome oxidase subunit III K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CR3_3240 cydB; cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_2304 smtA; SAM-dependent methyltransferase K19620 phcB; extracellular factor (EF) 3-hydroxypalmitic acid methyl ester biosynthesis protein
D CR3_2303 baeS; Signal transduction histidine kinase K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D CR3_2302 cheY; chemotaxis protein CheY K19622 phcR; two-component system, response regulator PhcR
D CR3_2329 lysR; LysR family transcriptional regulator K19624 phcA; LysR family transcriptional regulator, virulence genes transcriptional regulator
D CR3_2956 wza; polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CR3_2955 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CR3_0939 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CR3_2951 etk-wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CR3_2954 etk-wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CR3_0498 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CR3_3747 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CR3_4485 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CR3_4486 fecR; Fe2+-dicitrate sensor, membrane component K07165 fecR; transmembrane sensor
D CR3_3746 fecR; Fe2+-dicitrate sensor, membrane component K07165 fecR; transmembrane sensor
D CR3_4412 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:cgd04148]
D CR3_0418 arg; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CR3_2509 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cgd02024]
D CR3_1695 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CR3_2446 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CR3_2451 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CR3_0915 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CR3_4434 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D CR3_4433 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CR3_3678 afuA; iron(III) transport system substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CR3_3676 potC; ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CR3_3677 cysU; sulfate transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CR3_3675 putative spermidine/putrescine transport system ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CR3_1585 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_4254 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_0853 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1487 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3265 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2794 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2819 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2823 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1102 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2988 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2998 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2183 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2222 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3058 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3157 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3994 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1584 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_1486 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3266 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2822 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2818 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_0220 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2999 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2221 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3057 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3159 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3995 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2817 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3996 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3158 livM; branched-chain amino acid transport system permease protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1583 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2821 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_0221 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1106 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2989 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2220 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_3056 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1485 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_3267 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1582 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1484 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3268 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2825 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_0219 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1103 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2990 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3000 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2219 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3055 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1581 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0801 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2816 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2824 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0222 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1104 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2991 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3001 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3054 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2218 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1483 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3269 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1819 calcium-binding protein K20276 bapA; large repetitive protein
D CR3_3293 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3553 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2491 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0016 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2422 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0218 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0217 crp; Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CR3_3541 crp; Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CR3_3557 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CR3_0548 ribD; multifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CR3_4199 tolC; RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_2892 oprM; outer membrane protein, multidrug efflux system K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_3712 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_0013 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_0101 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_2428 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_3297 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_3225 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_1916 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_0189 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_3299 dppB; peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_3226 dppB; peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_3711 dppB; peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_0190 dppB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_0012 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_2427 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_3298 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_3227 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_3710 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_0191 peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_0011 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_2426 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3228 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3708 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_0192 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3296 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3295 oppF; peptide/nickel transport system ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CR3_0004 yidC; YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CR3_0920 serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D CR3_2599 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CR3_0858 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CR3_2565 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CR3_2298 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CR3_2399 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CR3_0285 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CR3_0255 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CR3_2376 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CR3_3880 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3843 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3844 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cgd02030]
D CR3_4436 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_0019 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_4222 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3554 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_1901 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_4544 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3949 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3273 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_1060 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CR3_4437 aer; methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D CR3_4430 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CR3_4429 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CR3_4438 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CR3_4425 cheY; response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CR3_4424 cheZ; chemotaxis regulator CheZ K03414 cheZ; chemotaxis protein CheZ
D CR3_2647 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_4426 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_3408 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CR3_4427 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CR3_2646 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CR3_4428 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CR3_3209 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CR3_3169 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CR3_3168 fliNY; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D CR3_4432 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CR3_4431 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cgd02040]
D CR3_3211 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CR3_3210 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CR3_3209 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CR3_3208 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CR3_3207 fliJ; Flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CR3_3206 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CR3_3170 fliL; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D CR3_3169 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CR3_3168 fliNY; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D CR3_3167 fliOZ; flagellar protein FliO/FliZ K02418 fliO; flagellar protein FliO/FliZ
D CR3_3166 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CR3_3165 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CR3_3164 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CR3_4416 flhE; flhe: flagellar protein K03516 flhE; flagellar protein FlhE
D CR3_4420 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CR3_4421 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CR3_4411 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CR3_4410 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CR3_1359 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CR3_4409 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CR3_4408 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CR3_4407 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D CR3_4406 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CR3_4405 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CR3_4404 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CR3_4403 flgJ; peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D CR3_4402 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CR3_4401 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CR3_3217 fliC; flagellin K02406 fliC; flagellin
D CR3_3216 fliD; flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D CR3_3215 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CR3_3214 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D CR3_4432 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CR3_4431 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CR3_4412 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CR3_4413 flgN; flagellar synthesis protein K02399 flgN; flagellar biosynthesis protein FlgN
D CR3_0637 fliY; cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CR3_1956 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CR3_4434 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D CR3_4433 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CR3_0308 rpoN; RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D CR3_4417 fliA; sigma-70 region 4 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CR3_0967 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cgd04980]
D CR3_2277 btuR; cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CR3_0059 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CR3_0060 5-methyltetrahydrofolate-homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cgd01501]
D CR3_1845 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CR3_4078 ampC; beta-lactamase class C K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D CR3_0530 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2890 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_4234 hydrophobe/amphiphile efflux-1 protein K18138 acrB; multidrug efflux pump
D CR3_2891 acrB; Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump
D CR3_4199 tolC; RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_2892 oprM; outer membrane protein, multidrug efflux system K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_2546 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CR3_0023 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CR3_2414 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cgd01502]
D CR3_2406 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CR3_1135 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CR3_2412 murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CR3_2411 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CR3_2408 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cgd01503]
D CR3_1310 eptA; sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CR3_1335 eptA; sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CR3_4185 cpxR; two-component system, OmpR family, response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D CR3_2081 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CR3_3807 degQ; Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_1853 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_4472 periplasmic protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_0073 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CR3_1000 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CR3_0530 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2890 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_4234 hydrophobe/amphiphile efflux-1 protein K18138 acrB; multidrug efflux pump
D CR3_2891 acrB; Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_1169 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cgd01000]
C 01001 Protein kinases [BR:cgd01001]
D CR3_3342 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CR3_3929 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CR3_2951 etk-wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CR3_2954 etk-wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CR3_1752 phoR; sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CR3_1546 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CR3_2091 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CR3_0652 creC; sensor histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CR3_0172 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_3546 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1323 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1357 czcS; heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1380 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_0328 kdpD; histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CR3_2886 tctE; two-component system, OmpR family, sensor histidine kinase TctE K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CR3_3783 tctE; two-component system, OmpR family, sensor histidine kinase TctE K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CR3_4186 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_4554 sensory histidine kinase in two-component regulatory system K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_3756 major facilitator superfamily transporter K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_4077 qseC; two-component system, OmpR family, sensor histidine kinase QseC K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_3125 evgS; two-component system, NarL family, sensor histidine kinase EvgS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CR3_2872 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CR3_3819 sensor protein, ATP binding histine kinase, transmembrane K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CR3_1670 ntrB; NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CR3_2857 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CR3_2852 dctB; histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CR3_4430 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CR3_0116 regB; two-component system, sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CR3_3288 regB; two-component system, sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CR3_2303 baeS; Signal transduction histidine kinase K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cgd01009]
D CR3_0156 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CR3_1919 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D CR3_1561 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cgd01002]
D CR3_1341 pbrB_C; lipoprotein signal peptidase involved in Pb(II) resistance PbrB/C K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CR3_2238 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CR3_1290 hopD; leader peptidase HopD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CR3_2392 pilD; type IV pilus prepilin leader peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CR3_3328 cpaA; prepilin peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CR3_2004 cpaA; prepilin peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CR3_4391 guaA; glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CR3_1182 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CR3_1888 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CR3_2538 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CR3_0171 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CR3_4563 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CR3_4207 pfpI; PfpI family intracellular protease K05520 yhbO; deglycase [EC:3.5.1.124]
D CR3_3687 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CR3_0811 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CR3_1614 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D CR3_1507 cwlK; peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CR3_4369 pqqL; zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D CR3_0286 pqqL; zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D CR3_0287 pqqL; zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D CR3_0415 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CR3_4359 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CR3_1403 glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CR3_1144 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CR3_2898 hipO; hippurate hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D CR3_2748 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CR3_4339 nlpD; metallopeptidase, m23b family protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CR3_1156 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CR3_2163 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CR3_1761 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CR3_0669 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CR3_1937 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CR3_0672 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CR3_2764 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CR3_2860 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CR3_2203 peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D CR3_2122 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D CR3_1164 rseP; zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CR3_3607 dppA1; D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D CR3_1729 mtfA; anti-repressor for DgsA(Mlc) K09933 mtfA; MtfA peptidase
D CR3_3606 dmpA; D-aminopeptidase DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D CR3_3807 degQ; Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_1853 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_4472 periplasmic protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_2512 degQ; serine protease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D CR3_0920 serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D CR3_0228 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CR3_1603 pbpG; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D CR3_2103 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CR3_1533 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CR3_1531 lon; peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CR3_1080 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CR3_1851 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CR3_3842 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CR3_1425 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CR3_0251 ctpA; peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CR3_1232 acyl-homoserine lactone acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D CR3_3945 PbsX family transcriptional regulator K01434 pac; penicillin G amidase [EC:3.5.1.11]
D CR3_1867 sppA; peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D CR3_1229 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CR3_0110 clpQ; peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CR3_3601 beta-aspartyl-peptidase (threonine type) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CR3_2078 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_3143 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4007 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_4037 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_0605 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CR3_1932 pmbA; microcin-processing peptidase 1 K03592 pmbA; PmbA protein
D CR3_0916 tldD; peptidase C69 K03568 tldD; TldD protein
D CR3_2835 yfhM; bacterial alpha2-macroglobulin colonization factor ECAM K06894 yfhM; alpha-2-macroglobulin
D CR3_1692 hflC; membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D CR3_1693 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:cgd01003]
D CR3_3471 Fe-S oxidoreductase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D CR3_0838 rfaG; glycosyl transferase family 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D CR3_4217 glgA; starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CR3_1803 bcsA; cellulose synthase (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D CR3_2344 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CR3_2546 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CR3_4019 rfaG; glycosyl transferase family 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D CR3_2448 pgaC; N-glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D CR3_0346 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cgd01005]
D CR3_1169 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CR3_1170 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CR3_2401 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CR3_1167 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CR3_0998 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CR3_2072 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CR3_0132 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CR3_0133 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CR3_0134 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CR3_0790 lpxO; aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D CR3_0522 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CR3_0209 deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D CR3_3526 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D CR3_1310 eptA; sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CR3_1335 eptA; sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CR3_0965 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CR3_2074 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CR3_2037 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CR3_0312 kpsF; sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CR3_0701 rfaE; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D CR3_0049 rfaE; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D CR3_1783 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CR3_0521 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CR3_2119 waaF; ADP-heptose-LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CR3_0732 waaL; polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D CR3_2151 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CR3_3415 hisB; histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CR3_0702 gmhD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CR3_1626 wcaA; glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CR3_2000 wcaA; glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CR3_1363 wcaA; glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cgd01011]
D CR3_2527 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CR3_3973 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CR3_2250 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CR3_2407 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CR3_2410 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CR3_2413 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CR3_2406 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CR3_1135 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CR3_1828 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CR3_1229 ldcA; L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CR3_2411 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CR3_2408 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CR3_0534 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CR3_2257 mviN; putative membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CR3_2546 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CR3_0023 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CR3_2414 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CR3_0228 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CR3_2103 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CR3_1603 pbpG; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D CR3_2344 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CR3_3687 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CR3_4339 nlpD; metallopeptidase, m23b family protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CR3_1507 cwlK; peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CR3_0161 slt; lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CR3_2441 mltA; murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D CR3_0706 mltB; lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CR3_1775 mltE; lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CR3_2742 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CR3_2081 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CR3_2373 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cgd01004]
D CR3_1860 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CR3_1861 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CR3_4104 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CR3_1857 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CR3_1216 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_0750 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1859 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3291 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3732 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_3932 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_2348 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_4096 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CR3_1168 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CR3_1743 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CR3_1527 tesA; arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CR3_0381 yciA; acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CR3_0823 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D CR3_0973 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1824 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CR3_1774 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D CR3_0539 acsA; acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D CR3_4258 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_1201 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_4493 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_0151 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_3015 bioW; 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CR3_3293 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3553 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2491 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0016 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2422 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0218 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3909 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CR3_2610 long-chain-fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CR3_1107 fatty-acyl-CoA synthase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CR3_3988 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CR3_0592 long-chain fatty acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CR3_1862 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CR3_2090 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CR3_2152 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CR3_0487 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cgd01008]
D CR3_3308 mbtH; antibiotic synthesis protein MbtH K05375 mbtH; MbtH protein
D CR3_3245 glcD; glycolate oxidase subunit, FAD-linked K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CR3_3203 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:cgd01006]
D CR3_1964 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CR3_2388 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CR3_1161 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CR3_1543 crtB; phytoene synthetase, trans-isoprenyl diphosphate synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CR3_2261 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CR3_2290 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cgd01007]
D CR3_1736 earS; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CR3_0599 glnS; glutamyl-trna synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CR3_1943 gluQ; glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CR3_0408 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CR3_0979 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CR3_1267 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CR3_1002 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CR3_0458 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CR3_2237 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CR3_1978 valS; tRNA synthetases class I family protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CR3_2325 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CR3_0949 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CR3_0368 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CR3_1699 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CR3_2149 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CR3_2150 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CR3_0628 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CR3_2380 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CR3_1042 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CR3_0615 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CR3_1046 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CR3_1047 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CR3_1094 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CR3_3499 alaC; aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CR3_0937 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_3642 tyrB; aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CR3_0901 ybdL; aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D CR3_1148 dapC; N-succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CR3_2524 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0691 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CR3_0088 bioF; aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CR3_0211 beta alanine-pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CR3_2216 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CR3_3229 puuE; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CR3_1993 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CR3_4372 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CR3_2117 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CR3_2273 pabBC; aminodeoxychorismate synthase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CR3_4149 phnW; 2-aminoethylphosphonate-pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CR3_0689 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:cgd00199]
D CR3_3130 fatty-acid peroxygenase K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:cgd00194]
D CR3_2800 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CR3_2801 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CR3_2802 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CR3_2803 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CR3_2804 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CR3_2805 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CR3_2806 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CR3_2807 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CR3_2808 atpI; F0F1 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cgd03000]
D CR3_4076 araC; AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D CR3_3092 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CR3_3440 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_1997 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_2815 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_4326 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_4365 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_0908 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_1945 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_2279 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_2364 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_4131 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_1276 lysR; LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_0008 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_0033 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_1186 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_1203 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_3041 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_3956 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CR3_4047 metR; LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D CR3_3520 nhaR; LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D CR3_2294 oxyR; LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CR3_0660 iciA; LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CR3_2181 cysB; transcriptional regulator CysB-like protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D CR3_1118 cbl; transcriptional regulator CysB-like protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D CR3_1950 tcuR; LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D CR3_3196 lysR; LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D CR3_3043 lysR; LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D CR3_4353 lysR; LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CR3_4383 lysR; LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D CR3_0427 lysR; LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D CR3_2329 lysR; LysR family transcriptional regulator K19624 phcA; LysR family transcriptional regulator, virulence genes transcriptional regulator
D CR3_4005 lysR; LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D CR3_0022 lysR; LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D CR3_0388 lysR; LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D CR3_4117 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CR3_3966 lysR; LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D CR3_3276 lysR; LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D CR3_4142 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CR3_1790 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CR3_3353 lacI; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CR3_3855 scrR; LacI family transcriptional regulator, sucrose operon repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D CR3_3083 gntR; LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D CR3_3887 phnF; GntR family transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D CR3_2210 hutC; GntR family transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D CR3_4400 phnF; GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CR3_0186 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CR3_1908 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CR3_4512 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CR3_3730 phnF; GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CR3_3034 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CR3_0770 pdhR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CR3_1026 fadR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CR3_3264 fadR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CR3_2187 fadR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CR3_2503 pdhR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CR3_3077 pdhR; GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CR3_4163 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CR3_3223 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CR3_1255 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CR3_3979 GntR family transcriptional regulator / MocR family aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CR3_3651 vanR; GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D CR3_2889 acrR; Transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D CR3_0122 ttk; TetR/AcrR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D CR3_4082 rutR; TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CR3_3771 acrR; Transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_3933 acrR; Transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_4243 nemR; TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_3484 nemR; TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_1805 nemR; TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_2780 nemR; TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_3757 acrR; Transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_1191 nemR; TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_1279 nemR; TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CR3_3795 nfxB; TetR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D CR3_3005 acrR; Transcriptional regulator K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
D CR3_3639 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_2836 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_0576 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_2624 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_0716 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_3259 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_4042 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_0386 ybaO; AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D CR3_3789 slyA; MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D CR3_4469 marR; MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D CR3_2982 marR; MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D CR3_3003 marR; MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D CR3_0577 marR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CR3_4259 marR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CR3_2714 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D CR3_2828 soxR; MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CR3_2879 soxR; SoxR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D CR3_0187 fur; Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CR3_0107 fur; Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CR3_2328 fur; Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CR3_4151 iclR; IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CR3_3682 iclR; IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CR3_4467 pcaR; IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CR3_1949 iclR; IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CR3_3096 pcaR; IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CR3_3059 iclR; IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CR3_0217 crp; Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CR3_3541 crp; Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CR3_1643 fnr; o2-sensitive transcriptional regulator of cconoqp operon K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CR3_0941 iscR; Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CR3_1262 arsR; ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CR3_1587 bzdR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D CR3_3514 rpiR; RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D CR3_0959 rpiR; RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D CR3_0047 birA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CR3_2167 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CR3_1238 prpR; ATPase AAA K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D CR3_3341 hipB; putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D CR3_1427 acoR; Transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CR3_3098 acoR; Transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CR3_3119 norR; anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D CR3_2052 modE; ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D CR3_2795 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CR3_1492 bolA; BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CR3_2667 parB; plasmid stablization protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_2809 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_2939 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_0924 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D CR3_2760 greA; Transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D CR3_0484 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CR3_3980 paiB; Negative transcriptional regulator K07734 paiB; transcriptional regulator
D CR3_0482 algH; putative transcriptional regulator K07735 algH; putative transcriptional regulator
D CR3_3959 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CR3_0105 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CR3_0554 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D CR3_2417 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cgd03021]
D CR3_2560 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CR3_2593 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CR3_2592 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CR3_0780 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CR3_1956 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CR3_1709 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CR3_1248 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CR3_1856 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CR3_0844 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CR3_3848 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CR3_0331 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CR3_3747 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CR3_4485 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CR3_0278 rpoH; RNA polymerase sigma 70 K03089 rpoH; RNA polymerase sigma-32 factor
D CR3_0308 rpoN; RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D CR3_4417 fliA; sigma-70 region 4 K02405 fliA; RNA polymerase sigma factor FliA
D CR3_1638 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CR3_0544 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D CR3_2598 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CR3_2506 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D CR3_2505 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D CR3_1855 rseA; anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D CR3_1854 rseB; sigma-e factor K03598 rseB; sigma-E factor negative regulatory protein RseB
D CR3_3959 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CR3_0105 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CR3_1765 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CR3_0782 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D CR3_1728 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cgd03019]
D CR3_1871 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CR3_0739 rng; ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D CR3_1850 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CR3_1685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CR3_2337 guanyl-specific ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CR3_1936 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CR3_1944 srmB; Superfamily II DNA and RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CR3_2142 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CR3_4235 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CR3_2591 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CR3_0967 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CR3_0855 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CR3_1728 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CR3_2276 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CR3_2014 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CR3_1695 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CR3_2062 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CR3_2267 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CR3_2381 nudH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CR3_1121 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D CR3_0303 yhbJ; glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D CR3_1678 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cgd03011]
D CR3_0696 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CR3_1157 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CR3_2579 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CR3_2561 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CR3_2568 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CR3_1082 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CR3_2589 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CR3_2571 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CR3_0401 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CR3_2586 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CR3_2562 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CR3_2590 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CR3_2563 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CR3_2572 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CR3_0854 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CR3_0724 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CR3_2576 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CR3_1084 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CR3_2581 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CR3_2256 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CR3_1883 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CR3_1959 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CR3_2596 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CR3_2582 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CR3_2585 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CR3_2584 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CR3_2573 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CR3_2570 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CR3_1085 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CR3_2595 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CR3_2597 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CR3_2594 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CR3_0400 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CR3_2575 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CR3_2566 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CR3_2578 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CR3_2559 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CR3_2569 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CR3_0727 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CR3_1045 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CR3_2386 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CR3_2580 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CR3_2583 rplW; ribosomal L23 family protein K02892 RP-L23; large subunit ribosomal protein L23
D CR3_2574 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CR3_2385 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CR3_2226 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CR3_2577 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CR3_2567 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CR3_1730 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CR3_1863 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CR3_2227 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CR3_0002 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CR3_1044 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CR3_0294 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CR3_1243 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_2605 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_4474 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_2432 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_1239 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_4478 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_2609 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_2436 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_1242 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_4475 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_2606 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_2433 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cgd03009]
D CR3_1850 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CR3_1936 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CR3_1849 era; GTPase Era K03595 era; GTPase
D CR3_2384 obg; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CR3_3959 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CR3_0105 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CR3_1638 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CR3_0544 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D CR3_2598 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CR3_0481 rsuA; 16S rRNA uridine-516 pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CR3_2156 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CR3_2859 rsmB; ribosomal RNA small subunit methyltransferase b K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CR3_2232 rsmB; ribosomal RNA small subunit methyltransferase b K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CR3_0288 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CR3_2334 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CR3_2811 gidB; 16S rRNA (guanine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CR3_2416 rsmH; 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CR3_1866 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CR3_2741 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CR3_1684 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CR3_1762 ftsJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CR3_0741 rlmH; 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CR3_0226 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CR3_1536 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D CR3_2319 ypsC; DNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D CR3_1703 rlmN; 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CR3_1706 rumA; 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CR3_1640 rluB; 23S rRNA pseudouridine2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CR3_1870 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CR3_1574 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CR3_2247 rluE; 23S rRNA pseudouridine2457 synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CR3_1154 16S rRNA pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CR3_1131 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CR3_0100 rimL; Acetyltransferase, including N-acetylase of ribosomal proteins K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D CR3_0725 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CR3_1567 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CR3_2356 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CR3_1143 prmB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D CR3_0984 ycfD; cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D CR3_1871 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CR3_0739 rng; ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D CR3_0483 ruvX; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CR3_1938 rsgA; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CR3_1696 engA; GTP-binding protein K03977 engA; GTPase
D CR3_1694 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D CR3_2104 tsaC; translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CR3_0781 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CR3_1636 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CR3_1639 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D CR3_0742 ybeB; ribosome-associated protein K09710 ybeB; ribosome-associated protein
D CR3_2145 ybeY; 16S rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D CR3_1933 hypothetical protein K09889 yjgA; ribosome-associated protein
D CR3_0307 sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D CR3_2461 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CR3_1864 putative metal-binding K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cgd03016]
D CR3_2337 guanyl-specific ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CR3_1736 earS; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CR3_2380 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CR3_2237 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CR3_2325 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CR3_0458 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CR3_0599 glnS; glutamyl-trna synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CR3_0949 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CR3_0368 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CR3_0615 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CR3_1042 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CR3_0628 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CR3_1002 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CR3_1978 valS; tRNA synthetases class I family protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CR3_1699 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CR3_1046 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CR3_1047 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CR3_0408 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CR3_0979 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CR3_1267 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CR3_0409 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CR3_1921 alanyl-tRNA synthetase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D CR3_2516 hit; histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CR3_0215 hinT; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CR3_1915 S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CR3_0535 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CR3_1896 truA; tRNA pseudouridine38-40 synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CR3_1635 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CR3_0942 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CR3_2104 tsaC; translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CR3_2261 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CR3_0005 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CR3_2812 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CR3_0777 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CR3_2347 rnb; ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D CR3_3093 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CR3_2496 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D CR3_2149 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CR3_2150 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CR3_1943 gluQ; glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CR3_1537 ebsC; putative transcription regulator K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CR3_1228 tadA; tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CR3_1064 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CR3_2166 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CR3_2143 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CR3_3238 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CR3_0996 trmH; RNA methyl transferase TrmH K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D CR3_0726 hypothetical protein K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CR3_0258 cspR; tRNA (cytidine/uridine-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CR3_1172 spoU; 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CR3_2311 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CR3_0168 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CR3_0944 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D CR3_1461 gcvT; aminomethyltransferase (glycine cleavage system tprotein) K06980 ygfZ; tRNA-modifying protein YgfZ
D CR3_1535 mnmC; FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D CR3_2296 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CR3_0563 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CR3_1227 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CR3_1226 nrdG; organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CR3_0342 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CR3_2083 putative Fe-S electron transport protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CR3_0249 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CR3_2297 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CR3_1005 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CR3_1130 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CR3_1961 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CR3_2082 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CR3_0588 heme biosynthesis protein HemY K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CR3_1685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CR3_0855 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cgd03012]
D CR3_1637 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CR3_1043 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CR3_1139 ABC transporter ATPase K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CR3_1158 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CR3_2587 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CR3_2601 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CR3_2588 elongation factor G K02355 fusA; elongation factor G
D CR3_2480 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CR3_1160 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CR3_2482 hemK; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CR3_0293 peptidyl-tRNA hydrolase, PTH1 family K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CR3_2564 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CR3_1748 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CR3_1844 efp; elongation factor P K02356 efp; elongation factor P
D CR3_0951 prfB; peptide chain release factor B K02836 prfB; peptide chain release factor 2
D CR3_4566 prfC; Peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D CR3_2767 prfB; peptide chain release factor B K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:cgd03110]
D CR3_2243 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CR3_1110 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CR3_0667 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CR3_1532 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CR3_0111 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CR3_1919 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D CR3_2276 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CR3_0946 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D CR3_2014 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CR3_3064 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CR3_2275 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CR3_0945 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D CR3_0970 hslO; Hsp33 chaperonin K04083 hslO; molecular chaperone Hsp33
D CR3_0928 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CR3_0136 heat shock protein 20 K13993 HSP20; HSP20 family protein
D CR3_0137 heat shock protein 20 K13993 HSP20; HSP20 family protein
D CR3_0666 heat shock protein 20 K13993 HSP20; HSP20 family protein
D CR3_0926 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CR3_2015 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D CR3_3807 degQ; Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_1853 peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_4472 periplasmic protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CR3_1761 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CR3_0669 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CR3_2807 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CR3_0255 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CR3_0117 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CR3_0920 serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D CR3_1000 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CR3_0999 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CR3_1528 ppiD; peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CR3_2923 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CR3_0596 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CR3_2224 slpA; FKBP-type peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D CR3_0985 slyD; FKBP-type peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CR3_1493 ppiC; peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CR3_2157 surA; molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CR3_1727 trxA; Thiol-disulfide isomerase and thioredoxins K03671 TXN; thioredoxin
D CR3_4181 trxA; Thiol-disulfide isomerase and thioredoxins K03671 TXN; thioredoxin
D CR3_0670 trxC; thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D CR3_0591 thioredoxin K05838 ybbN; putative thioredoxin
D CR3_0254 grxC; glutaredoxin K03676 grxC; glutaredoxin 3
D CR3_2483 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D CR3_0073 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CR3_1137 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D CR3_2459 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CR3_2557 dsbD; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:cgd04131]
D CR3_4461 phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D CR3_1704 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CR3_0822 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CR3_2330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CR3_0252 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_2757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_2109 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_1919 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cgd03051]
D CR3_1919 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cgd03032]
D CR3_1778 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CR3_3535 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CR3_2842 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CR3_1048 ihfA; transcriptional regulator, integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CR3_0697 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CR3_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CR3_4302 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CR3_1086 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CR3_1957 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CR3_0318 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CR3_0730 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CR3_2935 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CR3_0416 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CR3_2323 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CR3_1459 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CR3_1779 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_4479 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_1723 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CR3_1171 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CR3_1972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CR3_1152 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CR3_2265 dnaA; ATPase involved in DNA replication initiation K10763 hda; DnaA-homolog protein
D CR3_0687 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CR3_2934 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CR3_0656 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CR3_0655 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CR3_4215 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CR3_2866 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cgd03036]
D CR3_1850 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CR3_4366 hns; histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D CR3_4439 hns; histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D CR3_4092 hns; histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D CR3_3535 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CR3_2842 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CR3_1048 ihfA; transcriptional regulator, integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CR3_0697 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CR3_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CR3_2291 dps; starvation-inducible DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D CR3_2167 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CR3_1695 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CR3_0660 iciA; LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CR3_3639 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_2836 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_0576 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_2624 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_0716 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_3259 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_4042 lrp; AsnC/Lrp family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CR3_1150 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CR3_0454 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CR3_1641 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CR3_2404 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CR3_0968 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D CR3_2414 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CR3_0621 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CR3_1451 ftsK; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CR3_2415 ftsL; cell division protein FtsL -like protein K03586 ftsL; cell division protein FtsL
D CR3_2405 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CR3_2409 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CR3_2403 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CR3_0438 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D CR3_2394 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D CR3_1652 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D CR3_2081 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CR3_0530 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2890 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2912 minC; septation inhibitor protein K03610 minC; septum site-determining protein MinC
D CR3_2911 minD; septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D CR3_2910 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CR3_0122 ttk; TetR/AcrR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D CR3_0026 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CR3_0025 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CR3_0024 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CR3_2810 cobQ; cobyric acid synthase CobQ K03496 parA; chromosome partitioning protein
D CR3_2938 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CR3_2667 parB; plasmid stablization protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_2809 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_2939 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_0656 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CR3_0655 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CR3_2812 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CR3_2811 gidB; 16S rRNA (guanine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CR3_1346 bimA; tyrosine-based site-specific recombinase BimA K03733 xerC; integrase/recombinase XerC
D CR3_0032 xerC; integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC
D CR3_2088 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CR3_0460 mrp; ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CR3_2554 engB; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cgd03400]
D CR3_2087 methylated-DNA-[protein]-cysteine S-methyltransferase Ada K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CR3_2455 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CR3_0301 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CR3_0934 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CR3_2396 mutT; 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CR3_2240 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CR3_3205 alkB; alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D CR3_1132 dpo; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CR3_3812 dpo; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CR3_1003 alkA; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CR3_3092 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CR3_2643 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CR3_0300 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CR3_1615 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CR3_4378 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CR3_0128 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CR3_0953 recJ; single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CR3_1152 ligB; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CR3_1972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CR3_0316 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CR3_0335 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CR3_0938 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CR3_1842 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CR3_0231 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CR3_1976 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CR3_2593 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CR3_2592 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CR3_2560 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CR3_0780 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CR3_1552 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CR3_0987 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CR3_2260 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CR3_2069 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CR3_1965 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CR3_0730 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CR3_2935 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CR3_0416 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CR3_2323 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CR3_1459 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CR3_1779 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_4479 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CR3_1723 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CR3_0318 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CR3_2131 recA; recombinase RecA K03553 recA; recombination protein RecA
D CR3_2171 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CR3_2172 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CR3_2169 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CR3_2796 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CR3_1083 priB; restart primosome assembly protein PriB K02686 priB; primosomal replication protein N
D CR3_0205 sbcC; putative Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D CR3_0206 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D CR3_1136 radA; DNA repair protein RadA/Sms K04485 radA; DNA repair protein RadA/Sms
D CR3_2295 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CR3_1848 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CR3_1721 recR; recombinational DNA repair protein (RecF pathway) K06187 recR; recombination protein RecR
D CR3_0922 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D CR3_2369 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D CR3_1725 recombinase RecB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CR3_0747 yjgR; putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CR3_4455 hypothetical protein K10979 ku; DNA end-binding protein Ku
D CR3_3647 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D CR3_4453 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CR3_0687 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CR3_2934 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CR3_4215 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CR3_3535 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CR3_2842 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CR3_2167 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CR3_1048 ihfA; transcriptional regulator, integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CR3_0697 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CR3_4235 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CR3_2591 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CR3_4366 hns; histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D CR3_4439 hns; histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D CR3_4092 hns; histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D CR3_2844 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CR3_1080 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CR3_1952 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D CR3_3441 dinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair K14161 imuB; protein ImuB
D CR3_3443 dnaE; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CR3_2130 recX; recombination regulator RecX K03565 recX; regulatory protein
D CR3_2784 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D CR3_1576 dinG; helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CR3_4204 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CR3_2372 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CR3_1724 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CR3_2371 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cgd03029]
D CR3_2508 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CR3_1637 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CR3_1043 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CR3_1158 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CR3_2587 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CR3_2601 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CR3_2588 elongation factor G K02355 fusA; elongation factor G
D CR3_1849 era; GTPase Era K03595 era; GTPase
D CR3_0408 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CR3_2325 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CR3_0368 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CR3_4387 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_0028 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_3019 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_1518 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CR3_0030 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CR3_0027 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CR3_0318 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CR3_1165 bamA; outer membrane protein insertion porin family K07277 SAM50; outer membrane protein insertion porin family
D CR3_2276 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CR3_0928 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CR3_2014 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CR3_2015 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D CR3_3064 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CR3_2275 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CR3_2791 gloB; Zn-dependent hydrolase, including glyoxylase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D CR3_1292 sulfur dioxygenase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D CR3_0942 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CR3_0945 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D CR3_2483 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D CR3_0460 mrp; ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CR3_0266 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CR3_0272 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D CR3_0004 yidC; YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CR3_0270 cytochrome C oxidase subunit II K14998 SURF1; surfeit locus 1 family protein
D CR3_3287 surfeit locus 1 family protein K14998 SURF1; surfeit locus 1 family protein
D CR3_0273 cytochrome C oxidase assembly factor, scoc K07152 SCO1; protein SCO1
D CR3_1919 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cgd02000]
D CR3_0734 msbA; lipida exportABC system K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CR3_0382 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CR3_1138 mdlB; ABC-type multidrug transport system, ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D CR3_3799 mdlB; ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CR3_3412 ATP-binding cassette, subfamily B, bacterial K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CR3_0641 ATP-binding cassette, subfamily B, bacterial K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CR3_1821 lapB; peptidase C39 K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CR3_3317 pvdE; cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D CR3_0360 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D CR3_0653 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CR3_1115 cysU; sulfate transport system permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D CR3_1116 cysW; sulfate transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D CR3_1117 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CR3_2049 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CR3_3777 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CR3_2050 modC; MolT family ABC transporter permease K02018 modB; molybdate transport system permease protein
D CR3_2051 modC; ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CR3_0830 tupB; ABC transporter periplasmic protein K05772 tupA; tungstate transport system substrate-binding protein
D CR3_2271 tupA; ABC transporter permease K05773 tupB; tungstate transport system permease protein
D CR3_2272 tupC; ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CR3_0281 nrtA; nitrate/nitrite transport system substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CR3_4154 tauA; taurine transport system substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D CR3_4152 tauC; TauT family ABC transporter permease K15552 tauC; taurine transport system permease protein
D CR3_4153 tauB; TauT family ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CR3_3960 ssuA; sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3965 ssuA; sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3578 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_1716 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3723 tauA; taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CR3_3579 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_3725 tauC; TauT family ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_1714 tauC; TauT family ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D CR3_3963 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3724 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_3580 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_1715 tauB; TauT family ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CR3_0623 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CR3_4146 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CR3_2888 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CR3_0625 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CR3_4148 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CR3_0626 fbpC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CR3_4147 afuC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CR3_3678 afuA; iron(III) transport system substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CR3_3676 potC; ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CR3_3677 cysU; sulfate transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CR3_3675 putative spermidine/putrescine transport system ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CR3_0764 opuBC; substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CR3_1447 ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D CR3_0763 opuBB; glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CR3_0765 opuBB; glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D CR3_0766 opuBA; glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CR3_4481 tauA; taurine transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CR3_0383 tauA; taurine transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CR3_3920 tauA; taurine transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CR3_2213 tauA; taurine transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CR3_4484 tauC; TauT family ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CR3_0385 tauC; TauT family ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CR3_2212 tauC; TauT family ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CR3_3921 tauC; TauT family ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CR3_4483 tauB; TauT family ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CR3_0384 tauB; TauT family ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CR3_3922 ATP-binding cassette, sub-family E, member 1 K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CR3_2211 tauB; TauT family ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CR3_1784 glpV; glycerol transport system substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D CR3_1787 glpP; glycerol transport system permease protein K17322 glpP; glycerol transport system permease protein
D CR3_1786 glpQ; glycerol transport system permease protein K17323 glpQ; glycerol transport system permease protein
D CR3_1789 glpS; glycerol transport system ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D CR3_1788 glpT; glycerol transport system ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D CR3_1660 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CR3_1659 ugpA; ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CR3_1658 ugpE; sn-glycerol 3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CR3_1657 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CR3_0754 med; ABC transporter permease K07335 bmpA; basic membrane protein A and related proteins
D CR3_0756 ABC-type transporter, permease component K23535 nupB; general nucleoside transport system permease protein
D CR3_0755 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D CR3_0757 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D CR3_0044 ABC transporter permease K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CR3_2534 ttg2B; ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CR3_0046 ttg2B; ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CR3_2535 ttg2A; ABC-type transporter, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CR3_0045 ttg2A; ABC-type transporter, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CR3_3467 ttg2D; toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D CR3_2532 mlaC; phospholipid transport system substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CR3_2531 NTP binding protein involved in toluene tolerance K07122 mlaB; phospholipid transport system transporter-binding protein
D CR3_1758 pstS; phosphate-binding periplasmic protein, ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D CR3_1757 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CR3_1756 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein
D CR3_1755 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CR3_2658 phnD; phosphonate transport system substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CR3_3883 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CR3_2657 phosphate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D CR3_3884 PhnT family ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D CR3_2659 phnC; phosphonate transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CR3_3882 phnC; phosphonate transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CR3_0390 gltI; glutamate/aspartate ABC transporter permease GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CR3_0631 gltI; glutamate/aspartate transport system substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CR3_0392 gltK; glutamate/aspartate transport system permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D CR3_0391 gltJ; glutamate/aspartate transport system permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D CR3_0393 gltL; glutamate/aspartate transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CR3_0637 fliY; cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CR3_0638 hisM; ABC-type amino acid transport system, permease component K10009 tcyB; L-cystine transport system permease protein
D CR3_1585 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_4254 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_0853 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1487 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3265 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2794 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2819 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2823 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1102 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2988 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2998 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2183 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_2222 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3058 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3157 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_3994 livK; branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CR3_1584 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_1486 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3266 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2822 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2818 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_0220 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2999 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2221 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3057 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3159 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_3995 livH; branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CR3_2817 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3996 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3158 livM; branched-chain amino acid transport system permease protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1583 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2821 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_0221 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1106 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2989 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_2220 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_3056 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1485 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_3267 livM; branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CR3_1582 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1484 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3268 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2825 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_0219 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1103 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2990 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3000 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_2219 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_3055 livG; branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CR3_1581 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0801 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2816 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2824 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0222 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1104 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2991 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3001 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3054 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_2218 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_1483 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_3269 livF; branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CR3_0711 metQ; D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CR3_3750 metQ; D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CR3_0710 abcD; D-methionine transport system permease MetI K02072 metI; D-methionine transport system permease protein
D CR3_0709 abcC; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D CR3_0879 urtA; urea transport system substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D CR3_0880 urtB; urea transport system permease protein K11960 urtB; urea transport system permease protein
D CR3_0881 urtC; urea transport system permease protein K11961 urtC; urea transport system permease protein
D CR3_0882 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D CR3_0883 urtE; urea transport system ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D CR3_1596 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CR3_1597 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CR3_1598 phnK; ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CR3_1429 ABC-type transporter, periplasmic component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CR3_3648 hisJ; extracellular solute-binding protein, ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CR3_3649 hisM; ABC-type amino acid transport system, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D CR3_3650 arginine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CR3_3603 gsiB; glutathione transport system substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D CR3_3604 gsiC; glutathione transport system permease protein K13890 gsiC; glutathione transport system permease protein
D CR3_3605 gsiD; glutathione transport system permease protein K13891 gsiD; glutathione transport system permease protein
D CR3_3602 gsiA; glutathione transport system ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D CR3_3712 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_0013 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_0101 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_2428 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_3297 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_3225 dppA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_1916 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_0189 ddpA; peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CR3_3299 dppB; peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_3226 dppB; peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_3711 dppB; peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_0190 dppB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CR3_0012 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_2427 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_3298 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_3227 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_3710 dppC; peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_0191 peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CR3_0011 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_2426 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3228 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3708 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_0192 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3296 dppD; peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CR3_3295 oppF; peptide/nickel transport system ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CR3_1742 oppA; peptide ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D CR3_1741 ABC transporter permease K13894 yejB; microcin C transport system permease protein
D CR3_1740 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein
D CR3_1739 ABC transporter K13896 yejF; microcin C transport system ATP-binding protein
D CR3_4183 ceuA; iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CR3_0447 fepB; ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CR3_0441 fepD; ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CR3_0442 fepC; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CR3_3916 fepB; ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D CR3_3915 fepD; ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D CR3_3917 fepC; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CR3_2036 tagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K09688 kpsM; capsular polysaccharide transport system permease protein
D CR3_2034 kpsE; Capsule polysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D CR3_2035 tagH; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CR3_0494 tagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D CR3_0495 tagH; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CR3_0414 permease, yjgp/yjgq family protein K11720 lptG; lipopolysaccharide export system permease protein
D CR3_0309 lptB; ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CR3_1886 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein
D CR3_1885 nodI; lipooligosaccharide transport system ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D CR3_0955 ftsX; cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D CR3_0956 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CR3_2529 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CR3_1415 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CR3_0338 ybhS; inner membrane transport permease YbhS K01992 ABC-2.P; ABC-2 type transport system permease protein
D CR3_2530 ccmA; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CR3_1412 ccmA; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CR3_0339 ccmA; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CR3_0833 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CR3_3248 salY; peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CR3_1526 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CR3_3247 salX; methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CR3_2080 solute carrier family 10 (sodium/bile acid cotransporter), member 7 K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CR3_1732 mdtK; Na+-driven multidrug efflux pump, MATE family K26939 norM; MATE family, multidrug efflux pump
D CR3_2494 norM; Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CR3_3140 norM; Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CR3_0204 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D CR3_0006 proP; MFS transporter, MHS family, proline/betaine transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CR3_3953 oxlT; MFS transporter, OFA family, oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CR3_2778 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D CR3_3374 proP; MFS transporter, MHS family, proline/betaine transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D CR3_4247 narK; high affinity nitrate/nitrite transporter transmembrane protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CR3_1134 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D CR3_3142 proP; MFS transporter, MHS family, proline/betaine transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CR3_3534 bcr; MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CR3_3790 bcr; MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CR3_3735 ybcL; MFS transporter, DHA1 family, putative efflux transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D CR3_4342 araJ; MFS transporter, DHA1 family, arabinose polymer transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CR3_3569 araJ; MFS transporter, DHA1 family, arabinose polymer transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CR3_4470 proP; MFS transporter, MHS family, proline/betaine transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CR3_1634 emrB; MFS transporter, DHA2 family, multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CR3_3984 proP; MFS transporter, MHS family, proline/betaine transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CR3_3163 yebQ; MFS transporter, DHA2 family, multidrug resistance protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D CR3_2896 fsr; MFS transporter, FSR family, fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CR3_4195 proP; MFS transporter, MHS family, proline/betaine transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CR3_3940 ydjE; MFS transporter, putative metabolite:H+ symporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CR3_0246 ptsI; phosphotransferase system, enzyme I, PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CR3_0245 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CR3_0244 pts system fructose iia component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CR3_0306 phosphotransferase system mannitol/fructose-specific IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D CR3_3279 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D CR3_2905 glpF; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) K06188 aqpZ; aquaporin Z
D CR3_2281 kch; VIC superfamily ion transport protein K10716 kch; voltage-gated potassium channel
D CR3_0241 amt ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family
D CR3_0163 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_0900 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_3278 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_4489 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_2309 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CR3_2506 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D CR3_3358 yfbK; Ca-activated chloride channel-like K07114 yfbK; Ca-activated chloride channel homolog
D CR3_3804 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D CR3_3808 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D CR3_1705 yccA; modulator of FtsH protease YccA K19416 yccA; modulator of FtsH protease
D CR3_2510 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CR3_1254 transporter, small conductance mechanosensitive ion channel (MscS) family protein K05802 mscK; potassium-dependent mechanosensitive channel
D CR3_4560 mscS; mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D CR3_4499 mscS; mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D CR3_4432 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CR3_4431 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CR3_1831 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CR3_2070 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CR3_1832 exbD; biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D CR3_2071 exbD; biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D CR3_0557 tolQ; protein tolQ K03562 tolQ; biopolymer transport protein TolQ
D CR3_0558 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D CR3_2913 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CR3_2343 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CR3_1099 crcB; chromosome condensation membrane protein K06199 crcB; fluoride exporter
D CR3_2715 merT; mercury transporter K08363 merT; mercuric ion transport protein
D CR3_2716 merP; periplasmic mercuric ion binding protein K08364 merP; periplasmic mercuric ion binding protein
D CR3_3524 tlyC; putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CR3_0636 tlyC; putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CR3_0686 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CR3_1512 ompA; cell envelope biogenesis protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CR3_3386 fiu; catecholate siderophore receptor K16090 fiu; catecholate siderophore receptor
D CR3_3243 fiu; catecholate siderophore receptor K16090 fiu; catecholate siderophore receptor
D CR3_4565 fecA; Outer membrane receptor for Fe3+-dicitrate K16091 fecA; Fe(3+) dicitrate transport protein
D CR3_0440 btuB; outer membrane cobalamin receptor translocator, tonb dependent K16092 btuB; vitamin B12 transporter
D CR3_4184 fepA; ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CR3_0103 iron complex outermembrane recepter protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_1564 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_3316 fhuA; ferrichrome outer membrane transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_4176 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_4487 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_0188 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_3745 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_3785 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_1210 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_3029 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_3918 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_1398 cirA; Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CR3_1386 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CR3_3403 czcA; cobalt-zinc-cadmium resistance membrane-fusion protein CzcA K15725 czcC; outer membrane protein, heavy metal efflux system
D CR3_3628 tolC; RND transporter K15725 czcC; outer membrane protein, heavy metal efflux system
D CR3_4524 czcC; cobalt-zinc-cadmium resistance protein CzcC K15725 czcC; outer membrane protein, heavy metal efflux system
D CR3_1352 czcC; cobalt-zinc-cadmium resistance protein CzcC K15725 czcC; outer membrane protein, heavy metal efflux system
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_1820 lapE; outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D CR3_4349 tolC; RND transporter K18903 oprC; outer membrane protein, multidrug efflux system
D CR3_3792 oprJ; outer membrane protein, multidrug efflux system K08721 oprJ; outer membrane protein, multidrug efflux system
D CR3_4199 tolC; RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_2892 oprM; outer membrane protein, multidrug efflux system K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_2956 wza; polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CR3_1165 bamA; outer membrane protein insertion porin family K07277 SAM50; outer membrane protein insertion porin family
D CR3_1697 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D CR3_0982 nlpB; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D CR3_1575 comL; competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD
D CR3_2327 smpA; Small protein A (tmRNA-binding) K06186 bamE; outer membrane protein assembly factor BamE
D CR3_0456 membrane protein K07278 tamA; translocation and assembly module TamA
D CR3_0310 lptA; lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D CR3_0311 lptC; lipopolysaccharide export system protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D CR3_2158 lptD; LPS-assembly protein K04744 lptD; LPS-assembly protein
D CR3_2324 rlpB; rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D CR3_1799 nrfG; Tetratricopeptide repeats K20543 bcsC; cellulose synthase operon protein C
D CR3_4056 hypothetical protein K15344 sseB; secreted effector protein SseB
D CR3_4054 hypothetical protein K15345 sseC; secreted effector protein SseC
D CR3_2146 corC; cation transporter K06189 corC; hemolysin (HlyC) family protein
D CR3_2284 lrgA; lrga-like protein K06518 cidA; holin-like protein
D CR3_4539 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D CR3_3641 aroP; aromatic amino acid APC transporter AroP K11734 aroP; aromatic amino acid transport protein AroP
D CR3_4160 gabP; GABA permease K11735 gabP; GABA permease
D CR3_1355 czcD; Co/Zn/Cd efflux system component K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CR3_3630 czcA; cobalt-zinc-cadmium resistance membrane-fusion protein CzcA K15726 czcA; heavy metal efflux system protein
D CR3_4522 czcA; cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein
D CR3_1354 czcA; cobalt-zinc-cadmium resistance membrane-fusion protein CzcA K15726 czcA; heavy metal efflux system protein
D CR3_1305 cusA; Cu(I)/Ag(I) efflux system membrane protein CusA/SilA K07787 cusA; copper/silver efflux system protein
D CR3_4350 acrB; Cation/multidrug efflux pump K18902 bpeF; multidrug efflux pump
D CR3_3793 mexD; multidrug efflux pump K18296 mexD; multidrug efflux pump
D CR3_1540 acrB; Cation/multidrug efflux pump K18303 mexK; multidrug efflux pump
D CR3_4234 hydrophobe/amphiphile efflux-1 protein K18138 acrB; multidrug efflux pump
D CR3_2891 acrB; Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump
D CR3_2094 mdtB; multidrug efflux pump K07788 mdtB; multidrug efflux pump
D CR3_2095 mdtC; multidrug efflux pump K07789 mdtC; multidrug efflux pump
D CR3_1817 emrE; small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D CR3_2620 sugE; quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CR3_1207 sugE; quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CR3_4268 pecM; putative blue pigment (indigoidine) exporter K15269 pecM; probable blue pigment (indigoidine) exporter
D CR3_4240 rhtA; inner membrane transporter RhtA K11939 rhtA; inner membrane transporter RhtA
D CR3_2845 rarD; chloramphenicol-sensitive protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D CR3_1396 small multidrug resistance family-3 protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D CR3_3511 gntT; H+/gluconate symporter-related permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CR3_1926 lctP; lactate permease K03303 lutP; lactate permease
D CR3_3073 lctP; lactate permease K03303 lutP; lactate permease
D CR3_2286 opuD; glycine betaine transporter K05020 opuD; glycine betaine transporter
D CR3_1823 dhlC; solute:Na+ symporter permease transmembrane protein K14393 actP; cation/acetate symporter
D CR3_3589 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CR3_2749 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CR3_3590 gltS; sodium/glutamate symport carrier protein (glutamate permease) K03312 gltS; glutamate:Na+ symporter, ESS family
D CR3_3257 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CR3_3784 nhaP; Sodium/hydrogen exchanger K24160 NHA1; sodium/hydrogen antiporter
D CR3_0610 cvrA; cell volume regulation protein A K11105 cvrA; potassium/hydrogen antiporter
D CR3_4093 monovalent cation:H+ antiporter, CPA1 family K03316 nhaP; Na+:H+ antiporter
D CR3_2621 kefC; glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D CR3_2622 kefC; glutathione-regulated potassium-efflux system protein KefC K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D CR3_0313 putative glutathione-regulated potassium-efflux system k+/h+ antiporter transmembrane protein K03455 KEA1_2_3; K+:H+ antiporter
D CR3_3505 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D CR3_1837 monovalent cation:proton antiporter (CPA2 family) protein K26735 KEA4_5_6; K+:H+ antiporter
D CR3_0646 trkH; trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D CR3_0647 trkA; trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D CR3_0704 uraA; xanthine/uracil permease K09016 rutG; putative pyrimidine permease RutG
D CR3_1499 pbuX; xanthine permease K24206 uacT; uric acid transporter
D CR3_4012 xanP; xanthine permease XanP K24206 uacT; uric acid transporter
D CR3_0818 uraA; xanthine/uracil permease K24206 uacT; uric acid transporter
D CR3_1223 uraA; xanthine/uracil permease K24206 uacT; uric acid transporter
D CR3_4571 pbuG; putative MFS transporter, AGZA family, xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CR3_0649 benE; benzoate transporter K05782 benE; benzoate membrane transport protein
D CR3_2489 eriC; chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D CR3_3567 chrA; chromate transporter K07240 chrA; chromate transporter
D CR3_3568 chrA; chromate transporter K07240 chrA; chromate transporter
D CR3_1268 chrA; chromate transporter K07240 chrA; chromate transporter
D CR3_1392 chrA; chromate transporter K07240 chrA; chromate transporter
D CR3_1616 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D CR3_1249 mntH; manganese transporter protein K03322 mntH; manganese transport protein
D CR3_1031 dctQ; TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CR3_1521 dctQ; TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CR3_1519 dctP; C4-dicarboxylate ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D CR3_0315 yjbB; phosphate:Na+ symporter K03324 yjbB; phosphate:Na+ symporter
D CR3_1261 arsenite efflux pump ACR3 CMGI-7 K03325 ACR3; arsenite transporter
D CR3_3561 phaA; multicomponent K+:H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D CR3_3562 phaC; multicomponent K+:H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D CR3_3563 phaD; multicomponent K+:H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D CR3_3564 phaE; multicomponent K+:H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D CR3_3565 phaF; monovalent cation/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D CR3_3566 phaG; monovalent cation/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D CR3_2257 mviN; putative membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CR3_2084 permease K13936 mdcF; malonate transporter and related proteins
D CR3_1580 kup; potassium uptake transporter (kup) K03549 kup; KUP system potassium uptake protein
D CR3_0659 lysE; L-lysine exporter family protein LysE/ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CR3_0236 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D CR3_1198 lysE; lysine transporter LysE K05835 rhtC; threonine efflux protein
D CR3_1767 leuE; leucine efflux protein K11250 leuE; leucine efflux protein
D CR3_2160 azlC; branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D CR3_2113 azlC; branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D CR3_2112 membrane protein K26606 azlD; branched chain amino acid efflux pump
D CR3_2161 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D CR3_0762 tricarboxylate transporter K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_2915 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_3152 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_0608 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_3778 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_3188 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D CR3_0761 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_2884 ripartite tricarboxylate transport (TTT) family transport protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_3779 membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_2916 transmembrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_3151 membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D CR3_0760 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_2885 periplasmic tricarboxylate binding receptor (TctC) K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_3780 tricarboxylic transport membrane protein K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_4130 extra-cytoplasmic solute receptor K07795 tctC; putative tricarboxylic transport membrane protein
D CR3_0411 membrane lipoprotein, duf165 K09125 yhhQ; queuosine precursor transporter
D CR3_4223 marC; multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D CR3_2409 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CR3_0822 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CR3_1345 pbrT; high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter
D CR3_1830 tonB; cell envelope biogenesis protein TonB K03832 tonB; periplasmic protein TonB
D CR3_2346 tonB; cell envelope biogenesis protein TonB K03832 tonB; periplasmic protein TonB
D CR3_0561 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CR3_0559 tolA; colicin import membrane protein K03646 tolA; colicin import membrane protein
D CR3_0560 tolB; translocation protein TolB K03641 tolB; TolB protein
D CR3_1633 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D CR3_3983 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D CR3_1388 acrA; cation/multidrug efflux system, mebrane-fusion component K15727 czcB; membrane fusion protein, heavy metal efflux system
D CR3_3404 czcB; cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D CR3_3629 czcB; cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D CR3_4523 czcB; cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D CR3_1353 czcB; cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D CR3_1306 cusB; Cu(I)/Ag(I) efflux system membrane protein CusB/SilB K07798 cusB; membrane fusion protein, copper/silver efflux system
D CR3_1822 lapC; hemolysin-type secretion transmembrane protein K12542 lapC; membrane fusion protein, adhesin transport system
D CR3_4351 acrA; cation/multidrug efflux system, mebrane-fusion component K18901 bpeE; membrane fusion protein, multidrug efflux system
D CR3_3794 mexC; membrane fusion protein, multidrug efflux system K18295 mexC; membrane fusion protein, multidrug efflux system
D CR3_1541 acrA; cation/multidrug efflux system, mebrane-fusion component K18302 mexJ; membrane fusion protein, multidrug efflux system
D CR3_2876 acrA; cation/multidrug efflux system, mebrane-fusion component K21135 mexM; membrane fusion protein, multidrug efflux system
D CR3_0530 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2890 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2093 mdtA; membrane fusion protein, multidrug efflux system K07799 mdtA; membrane fusion protein, multidrug efflux system
D CR3_2951 etk-wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CR3_2954 etk-wzc; tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CR3_3053 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CR3_3052 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CR3_0009 mgtC; putative Mg2+ transporter-C (MgtC) family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CR3_2054 mgtC; putative Mg2+ transporter-C (MgtC) family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CR3_1349 czcM; putative Mg2+ transporter ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CR3_0820 hiuH; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D CR3_0177 copD; copper resistance protein CopD K07245 pcoD; copper resistance protein D
D CR3_1318 copD; copper resistance protein CopD K07245 pcoD; copper resistance protein D
D CR3_1375 copD; copper resistance protein CopD K07245 pcoD; copper resistance protein D
D CR3_0176 copC; Copper resistance protein CopC K07156 copC; copper resistance protein C
D CR3_1319 copC; Copper resistance protein CopC K07156 copC; copper resistance protein C
D CR3_1376 copC; Copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cgd02044]
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_1821 lapB; peptidase C39 K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CR3_1822 lapC; hemolysin-type secretion transmembrane protein K12542 lapC; membrane fusion protein, adhesin transport system
D CR3_1820 lapE; outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D CR3_2626 gspC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D CR3_2634 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D CR3_2635 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CR3_2636 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D CR3_2627 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D CR3_2628 gspH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D CR3_2629 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D CR3_2630 gspJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D CR3_2631 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D CR3_2632 gspM; general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D CR3_2633 gspN; general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D CR3_1290 hopD; leader peptidase HopD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CR3_2392 pilD; type IV pilus prepilin leader peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CR3_2125 pilA; major pilin subunit K02650 pilA; type IV pilus assembly protein PilA
D CR3_2390 pilB; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D CR3_2391 pilC; General secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC
D CR3_0550 pilE; Tfp pilus assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D CR3_1702 pilF; putative type 4 pilus biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D CR3_2545 pilN; fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D CR3_2544 pilO; pilus assembly protein PilO K23985 pilOP; type IV pilus assembly protein PilOP
D CR3_2543 pilQ; secretin K02666 pilQ; type IV pilus assembly protein PilQ
D CR3_0552 pilW; membrane protein K02672 pilW; type IV pilus assembly protein PilW
D CR3_0549 fimT; type IV fimbrial fimt-like transmembrane protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D CR3_3328 cpaA; prepilin peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CR3_2004 cpaA; prepilin peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CR3_3330 cpaB; pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D CR3_2006 cpaB; pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D CR3_2007 cpaC; pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D CR3_3332 cpaE; pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CR3_2009 cpaE; pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CR3_3333 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CR3_2010 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CR3_3334 tadB; tight adherence protein B K12510 tadB; tight adherence protein B
D CR3_2011 tadB; tight adherence protein B K12510 tadB; tight adherence protein B
D CR3_3335 tadC; type II secretion system protein K12511 tadC; tight adherence protein C
D CR3_2012 tadC; type II secretion system protein K12511 tadC; tight adherence protein C
D CR3_3336 tadD; Flp pilus assembly protein, contains TPR repeats K27079 tadD; tight adherence protein D
D CR3_3337 membrane protein K27080 tadG; tight adherence protein G
D CR3_2002 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CR3_2003 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CR3_4464 yggT; integral membrane protein YggT K02221 yggT; YggT family protein
D CR3_0703 comEA; competence protein ComEA K02237 comEA; competence protein ComEA
D CR3_0958 comEC; competence protein ComEC K02238 comEC; competence protein ComEC
D CR3_3692 yscC; type III secretion protein C K03219 yscC; type III secretion protein C
D CR3_4060 yscC; type III secretion protein C K03219 yscC; type III secretion protein C
D CR3_4059 yscD; type III secretion apparatus protein, YscD/HrpQ family K03220 yscD; type III secretion protein D
D CR3_3695 yscJ; type III secretion protein J K03222 yscJ; type III secretion protein J
D CR3_4072 yscJ; type III secretion protein J K03222 yscJ; type III secretion protein J
D CR3_3696 yscL; type III secretion protein K03223 yscL; type III secretion protein L
D CR3_3697 yscN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CR3_4067 yscN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CR3_3689 yscR; type III secretion protein R K03226 yscR; type III secretion protein R
D CR3_4065 yscR; type III secretion protein R K03226 yscR; type III secretion protein R
D CR3_3691 type III secretion system protein SctS K03227 yscS; type III secretion protein S
D CR3_4064 escS; type III secretion system apparatus protein K03227 yscS; type III secretion protein S
D CR3_3699 yscT; type III secretion protein T K03228 yscT; type III secretion protein T
D CR3_4063 yscT; type III secretion protein T K03228 yscT; type III secretion protein T
D CR3_3700 yscU; type III secretion protein U K03229 yscU; type III secretion protein U
D CR3_4062 yscU; type III secretion protein U K03229 yscU; type III secretion protein U
D CR3_3690 yscV; type III secretion protein V K03230 yscV; type III secretion protein V
D CR3_4068 yscV; type III secretion protein V K03230 yscV; type III secretion protein V
D CR3_4420 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CR3_4421 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CR3_3212 flhB2; flagellar protein K04061 flhB2; flagellar biosynthesis protein
D CR3_3210 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CR3_3208 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CR3_3168 fliNY; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D CR3_3167 fliOZ; flagellar protein FliO/FliZ K02418 fliO; flagellar protein FliO/FliZ
D CR3_3166 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CR3_3165 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CR3_3164 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CR3_2459 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CR3_1510 impL; type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL
D CR3_1513 impA; type VI secretion protein ImpA K11902 impA; type VI secretion system protein ImpA
D CR3_1502 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D CR3_1511 impM; type VI secretion-associated protein K11890 impM; type VI secretion system protein ImpM
D CR3_2399 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CR3_0255 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CR3_2299 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CR3_2599 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CR3_2300 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CR3_0858 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CR3_2565 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CR3_2376 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CR3_0285 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CR3_2298 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CR3_0004 yidC; YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CR3_2515 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D CR3_2514 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cgd02042]
D CR3_3524 tlyC; putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CR3_0636 tlyC; putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CR3_3880 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3843 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CR3_3844 plcC; phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:cgd02022]
D CR3_1752 phoR; sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CR3_1753 phoB; DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CR3_1546 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CR3_2091 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CR3_1545 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CR3_2092 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CR3_4185 cpxR; two-component system, OmpR family, response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D CR3_0652 creC; sensor histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CR3_0651 creB; response regulator protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D CR3_0172 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_3546 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1323 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1357 czcS; heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1380 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_0173 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_3545 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1322 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1356 czcR; winged helix family two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1379 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_0328 kdpD; histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CR3_2886 tctE; two-component system, OmpR family, sensor histidine kinase TctE K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CR3_3783 tctE; two-component system, OmpR family, sensor histidine kinase TctE K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CR3_2887 tctD; transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D CR3_3782 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07774 tctD; two-component system, OmpR family, response regulator TctD
D CR3_4186 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_4554 sensory histidine kinase in two-component regulatory system K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_3756 major facilitator superfamily transporter K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_4077 qseC; two-component system, OmpR family, sensor histidine kinase QseC K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CR3_2132 chemotaxis protein CheY K02483 K02483; two-component system, OmpR family, response regulator
D CR3_4555 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D CR3_2839 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D CR3_3242 arcA; CheY-like response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CR3_3250 response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator
D CR3_3818 ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D CR3_4328 citB; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CR3_3124 rcsB; LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CR3_3125 evgS; two-component system, NarL family, sensor histidine kinase EvgS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CR3_2872 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CR3_3819 sensor protein, ATP binding histine kinase, transmembrane K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CR3_1670 ntrB; NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CR3_1669 cheY; chemotaxis protein CheY K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CR3_2857 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CR3_2856 atoC; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CR3_2852 dctB; histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CR3_3587 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CR3_2851 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CR3_4430 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CR3_4425 cheY; response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CR3_2647 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_4426 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_3408 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CR3_4051 ssrB; two component system sensor kinase SsrB K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D CR3_2028 dctB; histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D CR3_2029 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD K17061 aauR; two-component system, response regulator AauR
D CR3_0116 regB; two-component system, sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CR3_3288 regB; two-component system, sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CR3_0115 regA; response regulator, rega/prra/actr family (chey-like receiver domain + fis-type hth domain) K15012 regA; two-component system, response regulator RegA
D CR3_3289 regA; response regulator, rega/prra/actr family (chey-like receiver domain + fis-type hth domain) K15012 regA; two-component system, response regulator RegA
D CR3_2303 baeS; Signal transduction histidine kinase K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D CR3_2302 cheY; chemotaxis protein CheY K19622 phcR; two-component system, response regulator PhcR
D CR3_2301 cheY; chemotaxis protein CheY K19623 phcQ; two-component system, probable response regulator PhcQ
D CR3_0282 amiR; response regulator with antiterminator output K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:cgd02035]
D CR3_4430 cheA; chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CR3_4429 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CR3_4438 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CR3_4427 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CR3_2646 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CR3_4428 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CR3_2647 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_4426 cheB; two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CR3_4425 cheY; response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CR3_4424 cheZ; chemotaxis regulator CheZ K03414 cheZ; chemotaxis protein CheZ
D CR3_3408 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CR3_4436 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_0019 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_4222 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3554 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_1901 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_4544 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3949 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_3273 mcp; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CR3_1060 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D CR3_4437 aer; methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D CR3_3208 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CR3_3207 fliJ; Flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CR3_3167 fliOZ; flagellar protein FliO/FliZ K02418 fliO; flagellar protein FliO/FliZ
D CR3_3166 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CR3_3165 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CR3_3164 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CR3_4420 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CR3_4421 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CR3_4416 flhE; flhe: flagellar protein K03516 flhE; flagellar protein FlhE
D CR3_3209 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CR3_3169 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CR3_3168 fliNY; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D CR3_3210 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CR3_4404 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CR3_4411 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CR3_4405 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CR3_3170 fliL; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D CR3_3211 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CR3_3206 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CR3_4410 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CR3_1359 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CR3_4409 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CR3_4407 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D CR3_4406 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CR3_4403 flgJ; peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D CR3_4408 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CR3_4402 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CR3_4401 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CR3_4413 flgN; flagellar synthesis protein K02399 flgN; flagellar biosynthesis protein FlgN
D CR3_3217 fliC; flagellin K02406 fliC; flagellin
D CR3_3216 fliD; flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D CR3_3215 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CR3_3214 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D CR3_4434 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D CR3_4433 flhC; transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D CR3_4417 fliA; sigma-70 region 4 K02405 fliA; RNA polymerase sigma factor FliA
D CR3_4432 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CR3_4431 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CR3_0637 fliY; cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CR3_4412 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CR3_4419 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CR3_4418 flhG; flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D CR3_2125 pilA; major pilin subunit K02650 pilA; type IV pilus assembly protein PilA
D CR3_2390 pilB; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D CR3_2391 pilC; General secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC
D CR3_1290 hopD; leader peptidase HopD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CR3_2392 pilD; type IV pilus prepilin leader peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CR3_1702 pilF; putative type 4 pilus biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D CR3_2543 pilQ; secretin K02666 pilQ; type IV pilus assembly protein PilQ
D CR3_2544 pilO; pilus assembly protein PilO K23985 pilOP; type IV pilus assembly protein PilOP
D CR3_2545 pilN; fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D CR3_0552 pilW; membrane protein K02672 pilW; type IV pilus assembly protein PilW
D CR3_0550 pilE; Tfp pilus assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D CR3_2002 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CR3_2003 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CR3_3328 cpaA; prepilin peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CR3_2004 cpaA; prepilin peptidase CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CR3_3330 cpaB; pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D CR3_2006 cpaB; pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D CR3_2007 cpaC; pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D CR3_3332 cpaE; pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CR3_2009 cpaE; pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CR3_3333 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CR3_2010 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cgd04812]
D CR3_0026 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CR3_2403 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CR3_2404 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CR3_2912 minC; septation inhibitor protein K03610 minC; septum site-determining protein MinC
D CR3_2911 minD; septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D CR3_2910 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CR3_2810 cobQ; cobyric acid synthase CobQ K03496 parA; chromosome partitioning protein
D CR3_2938 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CR3_2667 parB; plasmid stablization protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_2809 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CR3_2939 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cgd04147]
D CR3_1919 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D CR3_0967 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CR3_2330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CR3_2110 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CR3_2757 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_2109 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CR3_1000 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CR3_2014 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CR3_2276 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CR3_1525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CR3_4201 SMP-30/gluconolaconase/LRE domain-containing protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CR3_2587 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CR3_2601 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CR3_2516 hit; histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CR3_0215 hinT; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CR3_4002 ldh; malate/L-lactate dehydrogenase family protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CR3_2080 solute carrier family 10 (sodium/bile acid cotransporter), member 7 K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CR3_3293 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_3553 caiC; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2491 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0016 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_2422 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_0218 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CR3_1015 Selenium-binding protein 1 K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D CR3_0079 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1566 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1570 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_1480 atoB; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CR3_0156 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CR3_2075 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CR3_0314 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CR3_4312 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_0474 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_3201 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CR3_2253 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CR3_3020 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CR3_4107 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CR3_0810 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CR3_4211 glgB; glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CR3_1793 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CR3_2555 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CR3_3640 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CR3_2838 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CR3_4203 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_3437 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CR3_2168 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CR3_1937 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CR3_1608 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_1653 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_4367 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CR3_0713 fixB; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CR3_0389 gdhA; glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CR3_4558 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CR3_0857 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CR3_0252 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CR3_3475 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:cgd02048]
D CR3_2676 hsdR; DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CR3_2675 hsdS; type I restriction enzyme, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CR3_2674 hsdM; N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CR3_1312 copL; type II site-specific deoxyribonuclease (type II restriction enzyme) involved in resistance to copper (Cu(I)/Cu(II)) K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D CR3_1893 yhdJ; putative adenine-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CR3_4443 mazE; transcriptional regulator/antitoxin MazE K07172 mazE; antitoxin MazE
D CR3_3342 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CR3_3929 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CR3_3341 hipB; putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D CR3_0994 hicA; mRNA interferase K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D CR3_0993 antitoxin K18843 hicB; antitoxin HicB
D CR3_1194 doc; Prophage maintenance system killer protein K07341 doc; death on curing protein
D CR3_2055 vapI; Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D CR3_2469 vapI; Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D CR3_2976 stbB; plasmid stability protein StbB K07062 fitB; toxin FitB [EC:3.1.-.-]
D CR3_2977 stbC; plasmid stabilization protein K21495 fitA; antitoxin FitA
D CR3_2403 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CR3_0026 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CR3_0656 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CR3_0655 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CR3_1736 earS; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CR3_1903 hypothetical protein K09159 cptB; antitoxin CptB
D CR3_0942 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cgd01504]
D CR3_2924 aacC; aminoglycoside N3-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CR3_0648 aadK; aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D CR3_0172 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_3546 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1323 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1357 czcS; heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_1380 copS; heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CR3_0173 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_3545 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1322 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1356 czcR; winged helix family two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_1379 copR; heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CR3_0530 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_2890 acrA; cation/multidrug efflux system, mebrane-fusion component K03585 acrA; membrane fusion protein, multidrug efflux system
D CR3_4234 hydrophobe/amphiphile efflux-1 protein K18138 acrB; multidrug efflux pump
D CR3_2891 acrB; Cation/multidrug efflux pump K18138 acrB; multidrug efflux pump
D CR3_4199 tolC; RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_2892 oprM; outer membrane protein, multidrug efflux system K18139 oprM; outer membrane protein, multidrug efflux system
D CR3_3795 nfxB; TetR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D CR3_3794 mexC; membrane fusion protein, multidrug efflux system K18295 mexC; membrane fusion protein, multidrug efflux system
D CR3_3793 mexD; multidrug efflux pump K18296 mexD; multidrug efflux pump
D CR3_1541 acrA; cation/multidrug efflux system, mebrane-fusion component K18302 mexJ; membrane fusion protein, multidrug efflux system
D CR3_1540 acrB; Cation/multidrug efflux pump K18303 mexK; multidrug efflux pump
D CR3_2828 soxR; MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CR3_0526 tolC; type I secretion outer membrane efflux protein (TolC-like) K12340 tolC; outer membrane protein
D CR3_4353 lysR; LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CR3_4351 acrA; cation/multidrug efflux system, mebrane-fusion component K18901 bpeE; membrane fusion protein, multidrug efflux system
D CR3_4350 acrB; Cation/multidrug efflux pump K18902 bpeF; multidrug efflux pump
D CR3_4349 tolC; RND transporter K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cgd03100]
D CR3_1735 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_1241 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_2434 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_4476 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_2607 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_2724 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CR3_0783 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_4079 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_2781 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_0644 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_1746 trnA; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CR3_1882 trnA; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CR3_1529 trnA; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CR3_4334 trnA; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CR3_1733 trnA; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CR3_1838 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CR3_0207 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CR3_0296 trnG; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CR3_1734 trnG; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CR3_4333 trnG; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CR3_1839 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_1840 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_2603 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_0537 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CR3_1066 trnH; tRNA-His K14226 tRNA-His; tRNA His
D CR3_1240 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_2608 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_4477 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_2435 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CR3_4080 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_0859 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1539 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_2186 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1686 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1835 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CR3_1618 trnL; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CR3_1621 trnL; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CR3_0565 trnL; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CR3_2136 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_0786 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_1590 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_1955 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D CR3_2855 trnP; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CR3_2389 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CR3_1050 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CR3_1747 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CR3_1007 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_0773 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_0629 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_1808 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CR3_0808 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CR3_2504 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CR3_2602 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CR3_2600 trnT; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CR3_2604 trnT; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CR3_1041 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_4379 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_1780 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_1530 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D CR3_1239 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_4478 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_2609 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_2436 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CR3_1242 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_4475 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_2606 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_2433 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CR3_1243 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_2605 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_4474 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CR3_2432 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CR3_3042 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D CR3_0950 short chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D CR3_4011 dkgB; 2,5-diketo-d-gluconic acid reductase b K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D CR3_2193 gbd; 4-hydroxybutyrate dehydrogenase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D CR3_2188 3-hydroxyisobutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D CR3_3105 pdhA; pyruvate dehydrogenase, E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D CR3_3104 pdhB; pyruvate dehydrogenase, E1 component subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D CR3_0356 coxS; carbon-monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CR3_2986 coxS; carbon-monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CR3_0354 coxM; carbon-monoxide dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D CR3_2985 coxM; carbon-monoxide dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D CR3_2984 coxL; carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D CR3_0355 coxL; carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D CR3_2638 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D CR3_2366 MFS transporter K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D CR3_2064 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D CR3_1474 zinc-containing alcohol dehydrogenase superfamily protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D CR3_3394 pqqC; coenzyme PQQ synthesis C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D CR3_1422 pqqC; pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D CR3_2022 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D CR3_3823 isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D CR3_3631 isoquinoline 1-oxidoreductase, beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CR3_2021 carbon monoxide dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CR3_3824 isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CR3_3292 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D CR3_1435 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D CR3_1028 dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D CR3_0752 qor; NADPH2:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CR3_0856 qor; NADPH2:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CR3_1713 qor; NADPH2:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CR3_3658 qor; NADPH2:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CR3_3261 npd; nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CR3_1206 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CR3_1454 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CR3_0582 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CR3_1490 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CR3_4224 gst; glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CR3_1208 glutathione S-transferase domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CR3_2550 yedY; sulfoxide reductase catalytic subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CR3_1250 non-heme manganese-containing catalase rpos-dependent K07217 ydbD; manganese catalase [EC:1.11.1.6]
D CR3_1284 mhpC; alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D CR3_3829 cpo; Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D CR3_1092 peroxiredoxin Q/BCP K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CR3_2358 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CR3_0570 ahpC; peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CR3_3664 osmC; osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CR3_4362 osmC; osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CR3_3253 osmC; osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CR3_4260 osmC; osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CR3_1548 ahpD; alkyl hydroperoxide reductase subunit D K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CR3_1547 ahpC; alkyl hydroperoxide reductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CR3_1941 pirin (iron-binding nuclear protein) K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CR3_3061 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D CR3_3244 piuC; Fe(II)-dependent oxygenase superfamily protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D CR3_3120 hmp; nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D CR3_3309 pvdA; lysine/ornithine N-monooxygenase-like protein K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D CR3_1544 putative NAD/FAD-binding protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D CR3_2656 D-3-phosphoglycerate dehydrogenase K18916 ptxD; phosphonate dehydrogenase [EC:1.20.1.1]
D CR3_2746 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CR3_1260 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CR3_1420 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D CR3_2931 dltE; Short-chain dehydrogenase of various substrate specificities K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D CR3_1711 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CR3_0528 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CR3_0584 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CR3_0412 tam; trans-aconitate 2-methyltransferase Tam K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D CR3_3540 nhoA; arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D CR3_2147 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CR3_4321 yhbS; GCN5 family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D CR3_2925 yjaB; GCN5 family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CR3_1592 aat; leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CR3_1593 ate1; arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CR3_3424 rfaG; glycosyl transferase family 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CR3_0424 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CR3_4540 apbE; Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CR3_2189 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D CR3_1173 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CR3_0919 glnE; glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CR3_1489 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CR3_4179 ppsA; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D CR3_0077 aceK; isocitrate dehydrogenase kinase/phosphatase family protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D CR3_0305 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CR3_4122 frc; formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D CR3_1719 frc; formyl-CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D CR3_3773 yvaK; esterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D CR3_1470 putative phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CR3_0095 flK; thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CR3_1604 ybgC; acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CR3_1032 ybgC; acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CR3_0556 ybgC; acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CR3_1466 ybgC; acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CR3_0976 putative metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CR3_1749 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CR3_0957 tatD; TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CR3_1457 tatD; TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CR3_1798 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D CR3_4272 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CR3_2678 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CR3_0674 glycoside hydrolase family 24 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CR3_1555 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CR3_3513 D-aminoacylase Dan K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CR3_1275 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CR3_2863 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CR3_1153 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CR3_0917 apolipoprotein acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CR3_1619 ssnA; Cytosine deaminase-related metal-dependent hydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D CR3_3822 ridA; 2-iminobutanoate/2-iminopropanoate deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CR3_1865 maf; septum formation protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D CR3_3806 moxR; ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CR3_2190 araD; Ribulose-5-phosphate 4-epimerase-related epimerase and aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D CR3_1662 uxaA; galactarate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D CR3_3595 uxaA; galactarate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D CR3_1523 sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CR3_0793 tdcB; threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D CR3_2192 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D CR3_0214 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D CR3_2922 fcs; AMP-dependent synthetase and ligase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D CR3_3538 fadD; long-chain acyl-CoA synthetase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D CR3_0639 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CR3_0640 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CR3_2351 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CR3_0935 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CR3_1651 copB; heavy metal transporting P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CR3_1340 pbrA; Pb(II) resistance ATPase PbrA K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CR3_1362 zntA; Cd2+/Zn2+-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CR3_4089 zntA; Cd2+/Zn2+-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CR3_1601 glpC; glycolate oxidase iron-sulfur subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CR3_3076 glpC; glycolate oxidase iron-sulfur subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CR3_1600 (Fe-S)-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CR3_3074 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CR3_1878 membrane protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D CR3_3075 ykgG; transporter K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CR3_2057 fdhD; formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D CR3_0469 fdhD; formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D CR3_1880 fdxA; 4Fe-4S ferredoxin K05524 fdxA; ferredoxin
D CR3_4173 fdxA; 4Fe-4S ferredoxin K05524 fdxA; ferredoxin
D CR3_0943 iscU; scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CR3_3622 tcuB; citrate/tricarballylate utilization protein K13795 citB; citrate/tricarballylate utilization protein
D CR3_3621 tcuA; tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase
D CR3_0712 fixA; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D CR3_4451 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D CR3_0140 aidB; putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CR3_2641 yaeR; glyoxylase I family protein K08234 yaeR; glyoxylase I family protein
D CR3_2288 putative enzyme with a TIM-barrel fold K06997 yggS; PLP dependent protein
D CR3_3231 cupin K21700 bauB; beta-alanine degradation protein BauB
D CR3_0910 rimL; Acetyltransferase, including N-acetylase of ribosomal proteins K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D CR3_0698 putative integral membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D CR3_0699 N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B
D CR3_4414 O-acetylhomoserine sulfhydrylase K07027 K07027; glycosyltransferase 2 family protein
D CR3_1797 cellulose synthase K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D CR3_0480 hemY; heme biosynthesis protein HemY K02498 hemY; HemY protein
D CR3_0364 aarF; ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D CR3_0238 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D CR3_0372 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D CR3_1062 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CR3_3632 putative membrane protein K15977 K15977; putative oxidoreductase
D CR3_1452 DoxX protein K15977 K15977; putative oxidoreductase
D CR3_3481 carboxylesterase 2 (esterase ii) K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CR3_4572 cspA; cold-shock protein K03704 cspA; cold shock protein
D CR3_2937 cspA; cold-shock protein K03704 cspA; cold shock protein
D CR3_0324 cspA; cold-shock protein K03704 cspA; cold shock protein
D CR3_2245 cspA; cold-shock protein K03704 cspA; cold shock protein
D CR3_0240 glnK; nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
D CR3_1579 tex; Transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D CR3_4206 ySH1; putative exonuclease of the beta-lactamase fold involved in RNA processing K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D CR3_2244 clpS; ATP-dependent Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CR3_1534 tig; trigger factor K03545 tig; trigger factor
D CR3_2549 yedZ; sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CR3_0889 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D CR3_0890 ureF; urea amidohydrolase (urease) accessory protein UreF K03188 ureF; urease accessory protein
D CR3_0884 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D CR3_0886 ureJ; urease accessory protein UreJ K03192 ureJ; urease accessory protein
D CR3_1177 smpB; single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D CR3_0237 putative ATPase with chaperone activity K07391 comM; magnesium chelatase family protein
D CR3_0963 proteasome-type protease K07395 K07395; putative proteasome-type protease
D CR3_4338 yhfA; putative redox protein K07397 yhfA; putative redox protein
D CR3_0399 yhfA; putative redox protein K07397 yhfA; putative redox protein
D CR3_2553 resB; cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D CR3_0826 xdhC; xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D CR3_0350 xdhC; xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D CR3_1986 nfeD; serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
D CR3_4055 sscA; type III secretion system chaperone protein K15368 sscA; secretion system chaperone SscA
C 99976 Replication and repair
D CR3_2466 putative restriction endonuclease K07454 K07454; putative restriction endonuclease
D CR3_2225 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CR3_1875 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D CR3_2740 yraN; putative endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D CR3_4473 yhbQ; putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D CR3_2864 smf; DNA processing protein K04096 smf; DNA processing protein
D CR3_0627 ycaJ; putative ATPase K07478 ycaJ; putative ATPase
D CR3_2705 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CR3_1708 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D CR3_1810 tnp1; Transposase IS3/IS911family K07483 K07483; transposase
D CR3_1344 transposase K07483 K07483; transposase
D CR3_3364 insE1; IS3 transposase A K07483 K07483; transposase
D CR3_1052 tnp1; Transposase IS3/IS911family K07483 K07483; transposase
D CR3_3717 transposase K07483 K07483; transposase
D CR3_1113 tnp1; Transposase IS3/IS911family K07483 K07483; transposase
D CR3_0347 Transposase IS3/IS911family K07483 K07483; transposase
D CR3_0376 tnp; Transposase IS3/IS911family K07483 K07483; transposase
D CR3_1361 insE1; IS3 transposase A K07483 K07483; transposase
D CR3_1069 transposase IS66 K07484 K07484; transposase
D CR3_1070 transposase K07484 K07484; transposase
D CR3_1302 transposase IS66 K07484 K07484; transposase
D CR3_1303 transposase K07484 K07484; transposase
D CR3_2539 transposase K07491 rayT; REP-associated tyrosine transposase
D CR3_1112 tra5; transposase K07497 K07497; putative transposase
D CR3_0348 tra5; transposase K07497 K07497; putative transposase
D CR3_3718 tra5; transposase K07497 K07497; putative transposase
D CR3_1051 tra5; transposase K07497 K07497; putative transposase
D CR3_1809 tra5; transposase K07497 K07497; putative transposase
D CR3_0377 tra5; transposase K07497 K07497; putative transposase
D CR3_1343 tra5; transposase K07497 K07497; putative transposase
D CR3_1360 tra5; transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CR3_1722 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CR3_3714 solute carrier family 7 (L-type amino acid transporter), member 6 K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CR3_0212 potE; Amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CR3_3509 ADP/ATP antiporter, AAA family K03301 TC.AAA; ATP:ADP antiporter, AAA family
D CR3_1088 pitA; phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CR3_0365 putP; Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CR3_3452 putP; Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CR3_3123 alsT; alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CR3_0277 NCS1 nucleoside transporter K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D CR3_1491 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D CR3_0680 spoIVCA; site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D CR3_2718 spoIVCA; site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
D CR3_3990 tfoX; DNA transformation protein-related protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D CR3_3815 proQ; ProP effector K03607 proQ; ProP effector
D CR3_2871 cstA; carbon starvation protein K06200 cstA; carbon starvation protein
D CR3_1630 typA; GTP-binding protein K06207 typA; GTP-binding protein
D CR3_2053 CBS-domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D CR3_2144 phoH; phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CR3_1091 phoH2; phosphate starvation-inducible ATPase PhoH-like protein K07175 phoH2; PhoH-like ATPase
D CR3_4502 prkA; PrkA family serine protein kinase K07180 prkA; serine protein kinase
D CR3_2249 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CR3_0298 lolB; membrane protein K02494 lolB; outer membrane lipoprotein LolB
D CR3_2533 mlaA; phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CR3_3465 mlaA; phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CR3_0774 17 kDa surface antigen-like protein K06077 slyB; outer membrane lipoprotein SlyB
D CR3_2360 slyB; outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB
D CR3_1166 ompH; outer membrane protein K06142 hlpA; outer membrane protein
D CR3_1710 nlpD; metallopeptidase, m23b family protein K06194 nlpD; lipoprotein NlpD
D CR3_2030 kpsS; capsule polysaccharide transporter K07265 kpsS; capsular polysaccharide export protein
D CR3_2031 kpsC; capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D CR3_2032 Capsule polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D CR3_2831 ompW; outer membrane protein, OmpW family K07275 ompW; outer membrane protein
D CR3_3050 ompW; outer membrane protein, OmpW family K07275 ompW; outer membrane protein
D CR3_0587 asmA; Uncharacterized protein involved in outer membrane biogenesis K07290 yhjG; AsmA family protein
D CR3_0340 acrA; cation/multidrug efflux system, mebrane-fusion component K01993 ABC-2.TX; HlyD family secretion protein
D CR3_2099 membrane protein K04062 osmB; osmotically inducible lipoprotein OsmB
D CR3_2995 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D CR3_1701 rodZ; cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D CR3_1754 phoU; transcriptional regulator K02039 phoU; phosphate transport system protein
D CR3_0247 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D CR3_3530 mdoG; periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D CR3_4135 mdoG; periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D CR3_2558 cutA; divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D CR3_3892 phnK; putative phosphonate transport system ATP-binding protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D CR3_2443 apaG; CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein
D CR3_2547 cyaY; frataxin K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D CR3_0590 cation-binding hemerythrin HHE K07216 hr; hemerythrin
D CR3_0175 copB; copper resistance protein CopB K07233 pcoB; copper resistance protein B
D CR3_1320 copB; copper resistance protein CopB K07233 pcoB; copper resistance protein B
D CR3_1327 copB; copper resistance protein CopB K07233 pcoB; copper resistance protein B
D CR3_1377 copB; copper resistance protein CopB K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CR3_2044 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D CR3_1423 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D CR3_1421 pqqD; pyrroloquinoline quinone biosynthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D CR3_0834 glbN; hemoglobin K06886 glbN; hemoglobin
D CR3_1737 rssA; esterase alpha-beta hydrolase superfamily protein K07001 K07001; NTE family protein
D CR3_0051 rssA; esterase alpha-beta hydrolase superfamily protein K07001 K07001; NTE family protein
D CR3_2251 rssA; esterase alpha-beta hydrolase superfamily protein K07001 K07001; NTE family protein
D CR3_0121 pyrimidine 5-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D CR3_0403 iscA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D CR3_4231 rbn; membrane protein K07058 K07058; membrane protein
D CR3_1019 rbn; membrane protein K07058 K07058; membrane protein
D CR3_4567 rbn; membrane protein K07058 K07058; membrane protein
D CR3_3030 putative phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase
D CR3_0729 rhodanese superfamily protein K07146 K07146; UPF0176 protein
D CR3_1244 phnB; PhnB protein K04750 phnB; PhnB protein
D CR3_4090 phnB; PhnB protein K04750 phnB; PhnB protein
D CR3_1834 glcG; Uncharacterized protein K11477 glcG; glc operon protein GlcG
D CR3_1259 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D CR3_3315 fhuF; ferric iron reductase protein FhuF K13255 fhuF; ferric iron reductase protein FhuF
D CR3_1994 hypothetical protein K03744 lemA; LemA protein
D CR3_1495 hypothetical protein K03745 slyX; SlyX protein
D CR3_3537 creA; CreA protein K05805 creA; CreA protein
D CR3_1889 dedD; DedD protein K03749 dedD; DedD protein
D CR3_2259 dedA; membrane protein K03975 dedA; membrane-associated protein
D CR3_2042 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D CR3_2043 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D CR3_0157 membrane protein K08972 K08972; putative membrane protein
D CR3_0613 inner membrane protein K08983 K08983; putative membrane protein
D CR3_3433 putative outer membrane protein K08995 K08995; putative membrane protein
D CR3_3321 putative outer membrane protein K08995 K08995; putative membrane protein
D CR3_3654 putative outer membrane protein K08995 K08995; putative membrane protein
D CR3_3850 putative outer membrane protein K08995 K08995; putative membrane protein
D CR3_0084 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D CR3_0336 arp; Ankyrin repeat K06867 K06867; uncharacterized protein
D CR3_2155 ankyrin K06867 K06867; uncharacterized protein
D CR3_3726 arp; Ankyrin repeat K06867 K06867; uncharacterized protein
D CR3_1456 arp; Ankyrin repeat K06867 K06867; uncharacterized protein
D CR3_0593 arp; Ankyrin repeat K06867 K06867; uncharacterized protein
D CR3_3878 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D CR3_4325 hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D CR3_4371 hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D CR3_2397 ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein
D CR3_2799 yccU; CoA-binding protein K06929 K06929; uncharacterized protein
D CR3_0098 Fe-S oxidoreductase K06938 K06938; uncharacterized protein
D CR3_1233 putative Fe-S protein K06938 K06938; uncharacterized protein
D CR3_0532 putative Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D CR3_2374 hypothetical protein K06950 K06950; uncharacterized protein
D CR3_4382 putative acyl esterase K06978 K06978; uncharacterized protein
D CR3_3090 dioxygenase of extradiol dioxygenase family protein K06991 K06991; uncharacterized protein
D CR3_3037 peptidase C39 K06992 K06992; uncharacterized protein
D CR3_3731 putative enzyme of the cupin superfamily K06995 K06995; uncharacterized protein
D CR3_2026 putative enzyme of the cupin superfamily K06995 K06995; uncharacterized protein
D CR3_2770 lactoylglutathione lyase-like protein K06996 K06996; uncharacterized protein
D CR3_2350 esterase K07000 K07000; uncharacterized protein
D CR3_3466 RND transporter K07003 K07003; uncharacterized protein
D CR3_3939 putative flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D CR3_4488 putative flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D CR3_0603 1 pyridoxamine 5'-phosphate oxidase-related, fmn-binding protein K07006 K07006; uncharacterized protein
D CR3_4384 putative hydrolase of the alpha/beta superfamily K07018 K07018; uncharacterized protein
D CR3_0229 transmembrane protein K07018 K07018; uncharacterized protein
D CR3_2120 putative hydrolase of the alpha/beta-hydrolase fold K07019 K07019; uncharacterized protein
D CR3_4238 gloA; glyoxalase/bleomycin resistance protein/ring-cleaving dioxygenase K07032 K07032; uncharacterized protein
D CR3_1400 glyoxalase K07032 K07032; uncharacterized protein
D CR3_4039 glyoxalase/bleomycin resistance protein/dioxygenase K07032 K07032; uncharacterized protein
D CR3_3943 putative metal-dependent hydrolase K07044 K07044; uncharacterized protein
D CR3_1217 amidohydrolase 2 K07045 K07045; uncharacterized protein
D CR3_1218 amidohydrolase 2 K07045 K07045; uncharacterized protein
D CR3_2758 ypfJ; neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D CR3_4256 putative nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein
D CR3_4510 putative nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein
D CR3_0436 permease K07090 K07090; uncharacterized protein
D CR3_3393 putative permease K07090 K07090; uncharacterized protein
D CR3_4525 yfcA; inner membrane protein K07090 K07090; uncharacterized protein
D CR3_4126 putative permease K07090 K07090; uncharacterized protein
D CR3_4530 yfcA; inner membrane protein K07090 K07090; uncharacterized protein
D CR3_1296 membrane protein K07090 K07090; uncharacterized protein
D CR3_2180 permease K07090 K07090; uncharacterized protein
D CR3_1439 permease K07090 K07090; uncharacterized protein
D CR3_3681 phoX; putative phosphatase K07093 K07093; uncharacterized protein
D CR3_3204 phoX; putative phosphatase K07093 K07093; uncharacterized protein
D CR3_2495 putative phosphohydrolase K07098 K07098; uncharacterized protein
D CR3_1689 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D CR3_1294 YeeE/YedE K07112 K07112; uncharacterized protein
D CR3_1295 membrane protein K07112 K07112; uncharacterized protein
D CR3_0564 putative yeeE-like protein K07112 K07112; uncharacterized protein
D CR3_2841 nuclear protein SET K07117 K07117; uncharacterized protein
D CR3_1688 oxidoreductase K07118 K07118; uncharacterized protein
D CR3_4188 dltE; Short-chain dehydrogenase of various substrate specificities K07124 K07124; uncharacterized protein
D CR3_3749 TPR repeat, SEL1 subfamily protein K07126 K07126; uncharacterized protein
D CR3_3175 hypothetical protein K07126 K07126; uncharacterized protein
D CR3_0794 putative FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D CR3_0302 peptidase S16 K07157 K07157; uncharacterized protein
D CR3_0352 coxE; Protein containing von Willebrand factor type A (vWA) domain K07161 K07161; uncharacterized protein
D CR3_0003 hypothetical protein K08998 K08998; uncharacterized protein
D CR3_2729 signal peptide protein K09004 K09004; uncharacterized protein
D CR3_2248 signal peptide protein K09005 K09005; uncharacterized protein
D CR3_1958 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D CR3_0159 hypothetical protein K09122 K09122; uncharacterized protein
D CR3_0227 hypothetical protein K09158 K09158; uncharacterized protein
D CR3_2987 hypothetical protein K09386 K09386; uncharacterized protein
D CR3_0351 coxG; carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D CR3_0797 putative polymerase, most proteins containing PALM domain, HD hydrolase domain and Zn-ribbon domain K09749 K09749; uncharacterized protein
D CR3_3615 hypothetical protein K09780 K09780; uncharacterized protein
D CR3_2644 membrane protein K09781 K09781; uncharacterized protein
D CR3_4501 hypothetical protein K09786 K09786; uncharacterized protein
D CR3_0224 hypothetical protein K09790 K09790; uncharacterized protein
D CR3_2073 hypothetical protein K09791 K09791; uncharacterized protein
D CR3_1642 membrane protein K09792 K09792; uncharacterized protein
D CR3_1179 protein RnfH K09801 K09801; uncharacterized protein
D CR3_2873 hypothetical protein K09803 K09803; uncharacterized protein
D CR3_2045 hypothetical protein K09857 K09857; uncharacterized protein
D CR3_0903 hypothetical protein K09861 K09861; uncharacterized protein
D CR3_2395 zinc-binding protein K09862 K09862; uncharacterized protein
D CR3_0616 hypothetical protein K09919 K09919; uncharacterized protein
D CR3_0031 hypothetical protein K09921 K09921; uncharacterized protein
D CR3_2269 hypothetical protein K09922 K09922; uncharacterized protein
D CR3_0688 signal peptide protein K09924 K09924; uncharacterized protein
D CR3_3387 hypothetical protein K09928 K09928; uncharacterized protein
D CR3_4543 hypothetical protein K09939 K09939; uncharacterized protein
D CR3_0795 hypothetical protein K09941 K09941; uncharacterized protein
D CR3_3249 hypothetical protein K09950 K09950; uncharacterized protein
D CR3_4345 hypothetical protein K09954 K09954; uncharacterized protein
D CR3_3952 hypothetical protein K09957 K09957; uncharacterized protein
D CR3_1410 hypothetical protein K09959 K09959; uncharacterized protein
D CR3_4297 hypothetical protein K09961 K09961; uncharacterized protein
D CR3_3586 hypothetical protein K09965 K09965; uncharacterized protein
D CR3_2207 hypothetical protein K09975 K09975; uncharacterized protein
D CR3_1133 hypothetical protein K09977 K09977; uncharacterized protein
D CR3_0193 hypothetical protein K09981 K09981; uncharacterized protein
D CR3_0909 VWA containing CoxE family protein K09989 K09989; uncharacterized protein
D CR3_1087 Phosphate transport regulator K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024