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Transcription Machinery - Synechococcus sp. JA-2-3B'a(2-13)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E CYB_1580 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E CYB_2436 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E CYB_2437 rpoC1; DNA-directed RNA polymerase, gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E CYB_2438 rpoC2; DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E CYB_2308 putative DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E CYB_2206 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E CYB_1477 RNA polymerase sigma-70 factor family K03086 rpoD; RNA polymerase primary sigma factor
E CYB_0662 RNA polymerase sigma factor, group 1 K03086 rpoD; RNA polymerase primary sigma factor
E CYB_2734 RNA polymerase sigma-70 factor family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E CYB_1142 RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E CYB_0582 RNA polymerase sigma factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CYB_1178 RNA polymerase sigma-70 factor family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CYB_0232 sigma factor, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E CYB_2489 RNA polymerase sigma factor, group 3 K03090 sigB; RNA polymerase sigma-B factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E CYB_2245 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E CYB_2099 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E CYB_1220 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
E CYB_2066 GAF/SpoIIE domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E CYB_2926 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E CYB_0177 anti-anti-sigma factor family protein K04749 rsbV; anti-sigma B factor antagonist
E CYB_2666 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E CYB_2327 sensor histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024