+D GENES KO
#
KEGG Orthology (KO) - Dickeya dadantii 3937
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ddd00010]
D Dda3937_01026 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Dda3937_02136 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_00427 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dda3937_03875 glpX; Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dda3937_00413 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dda3937_03871 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dda3937_03335 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dda3937_00414 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dda3937_03989 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_00399 ytjC; phosphoglyceromutase 2, co-factor independent K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_00198 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dda3937_03576 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_04619 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_03524 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dda3937_03098 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dda3937_03097 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_01176 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_02153 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Dda3937_03796 yiaY; Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Dda3937_01587 yahK; predicted oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Dda3937_00988 aldB; Aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dda3937_03995 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dda3937_01120 yihX; Putative haloacid dehalogenase-like hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_03334 yeaD; conserved protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D Dda3937_00356 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dda3937_01286 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_03834 arbB; phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_02581 celH; Beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_02590 Beta-glucosidase; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_02591 Beta-glucosidase; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_01425 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Dda3937_02252 ptsG; PTS system glucose-specific IICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ddd00020]
D Dda3937_01540 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Dda3937_04039 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dda3937_02637 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Dda3937_02082 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dda3937_01535 sucA; 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Dda3937_01534 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_01532 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dda3937_01533 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dda3937_01537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_01536 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_01539 sdhC; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dda3937_01538 sdhD; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dda3937_02147 frdA; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_02146 frdB; fumarate reductase (anaerobic), Fe-S subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_02145 frdC; fumarate reductase (anaerobic), membrane anchor subunit K00246 frdC; succinate dehydrogenase subunit C
D Dda3937_02144 frdD; fumarate reductase (anaerobic), membrane anchor subunit K00247 frdD; succinate dehydrogenase subunit D
D Dda3937_01438 fumA; Fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Dda3937_04126 fumC; fumarate hydratase (fumarase C),aerobic Class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dda3937_00485 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D Dda3937_00356 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dda3937_03098 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dda3937_03097 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dda3937_01176 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_02153 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ddd00030]
D Dda3937_02136 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dda3937_03574 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dda3937_03939 ybhE; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Dda3937_00845 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Dda3937_04507 gnd; gluconate-6-phosphate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Dda3937_04186 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dda3937_04318 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00659 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01333 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01334 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00416 tktA; transketolase 1, thiamin-binding protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01398 talA; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Dda3937_00390 talB; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Dda3937_00408 rpiA; ribose 5-phosphate isomerase, constitutive K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Dda3937_02328 deoC; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Dda3937_02359 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Dda3937_02326 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_04095 phnN; ATP-binding protein phnN; Guanylate kinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D Dda3937_00034 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Dda3937_03573 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dda3937_01015 tkrA; 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Dda3937_00323 gntK; Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D Dda3937_02001 kdgK; 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Dda3937_00413 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dda3937_00427 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dda3937_03875 glpX; Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ddd00040]
D Dda3937_03435 pemB; Possible pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Dda3937_03374 pemA; Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Dda3937_03371 pelE; pectate lyase pelE K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_04193 pelB; pectate lyase B K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_03370 pelA; pectate lyase, Pla K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_03372 pelD; pectate lyase D K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_04192 pelC; pectate lyase C K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_03361 pelW; exopolygalacturonate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D Dda3937_00143 pelX; exopolygalacturonate lyase PelX K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D Dda3937_03686 ogl; Oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D Dda3937_00019 kdgF; Pectin degradation protein kdgF K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D Dda3937_03727 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Dda3937_04595 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Dda3937_02739 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Dda3937_02740 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D Dda3937_02741 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D Dda3937_02522 uxuA; Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Dda3937_01654 rspA; Starvation sensing protein rspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D Dda3937_01171 yeiQ; D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Dda3937_01658 ydfI; Putative D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Dda3937_01655 rspB; Starvation sensing protein rspB K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D Dda3937_03269 ugd; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dda3937_03270 galF; predicted regulatory subunit of UTP--glucose-1-phosphate uridylyltransferase, with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_04059 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_03100 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Dda3937_04186 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dda3937_00597 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Dda3937_00598 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D Dda3937_00986 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Dda3937_00985 xylA; D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Dda3937_02876 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Dda3937_02874 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D Dda3937_02527 lcfK; D-ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:ddd00051]
D Dda3937_02137 Mannan endo-1,4-beta-mannosidase precursor K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Dda3937_01936 mak; manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dda3937_01269 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dda3937_04125 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dda3937_00443 cpsG; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Dda3937_00442 cpsB; Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dda3937_00444 gmd; GDP-D-mannose dehydratase, NAD(P)-binding protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Dda3937_00447 fcl; GDP-L-fucose synthetase; Colanic acid biosynthesis protein wcaG K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dda3937_01967 L-fucose dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Dda3937_02875 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D Dda3937_02876 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Dda3937_02874 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D Dda3937_04137 Putative mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_00427 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dda3937_03875 glpX; Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dda3937_00994 mtlD; mannitol-1-phosphate dehydrogenase, NAD(P)-binding protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D Dda3937_03624 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Dda3937_00985 xylA; D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Dda3937_00413 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dda3937_03871 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dda3937_03623 fruA; PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Dda3937_03725 manX; PTS system mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Dda3937_03726 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D Dda3937_04593 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D Dda3937_00995 mtlA; PTS system, mannitol-specific IIC component / PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D Dda3937_04024 yfbT; sugar phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:ddd00052]
D Dda3937_03995 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dda3937_03996 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dda3937_03997 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Dda3937_03998 galE; UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dda3937_03270 galF; predicted regulatory subunit of UTP--glucose-1-phosphate uridylyltransferase, with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_04059 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_01026 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Dda3937_00746 lacZ; Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Dda3937_02393 ganB; 1,4-beta-exogalactanase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Dda3937_03029 rafA; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_01266 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Dda3937_03636 lfaA; Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:ddd00053]
D Dda3937_03269 ugd; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dda3937_01967 L-fucose dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Dda3937_04708 dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dda3937_01633 sgaT; Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D Dda3937_03100 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Dda3937_00189 gudD; D-glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D Dda3937_00190 garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D Dda3937_00185 garD; (D)-galactarate dehydrogenase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D Dda3937_02647 lfeW; mandelate racemase/muconate lactonizing enzyme family protein K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:ddd00500]
D Dda3937_01267 scrA; PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Dda3937_01266 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Dda3937_03636 lfaA; Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dda3937_03270 galF; predicted regulatory subunit of UTP--glucose-1-phosphate uridylyltransferase, with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_04059 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_02895 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Dda3937_03745 bgxA; Beta-glucosidase (Gentiobiase) (Cellobiase) / Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Dda3937_01990 bcsA; Cellulose synthase (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Dda3937_02793 cel5Z; endo-1,4-beta-glucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dda3937_02579 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02404 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02582 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02580 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D Dda3937_01286 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_03834 arbB; phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_02581 celH; Beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_02590 Beta-glucosidase; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_02591 Beta-glucosidase; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Dda3937_00332 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Dda3937_00333 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Dda3937_00330 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dda3937_00346 malP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Dda3937_00334 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Dda3937_00331 glgX; Glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D Dda3937_00347 malQ; 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Dda3937_01425 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_01026 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Dda3937_02136 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dda3937_01936 mak; manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dda3937_01269 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ddd00520]
D Dda3937_02258 nagZ; beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dda3937_01425 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Dda3937_03952 nagE; PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Dda3937_03644 nagK; N-acetyl-D-glucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D Dda3937_03950 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Dda3937_03951 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Dda3937_03084 Glucosamine kinase GpsK K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D Dda3937_03083 Glucosamine kinase GpsK K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D Dda3937_01936 mak; manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dda3937_01269 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dda3937_00141 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dda3937_02345 glmM; Phosphomannomutase / Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Dda3937_00142 glmU; bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Dda3937_03383 yfeU; Glucokinase regulatory protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Dda3937_00062 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Dda3937_00695 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dda3937_04216 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dda3937_00270 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dda3937_00271 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Dda3937_01078 yfbG; bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D Dda3937_01080 arnB; UDP-4-amino-4-deoxy-L-arabinose alpha-ketoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D Dda3937_01079 arnC; Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D Dda3937_01077 yfbH; undecaprenyl phosphate-alpha-L-Ara4FN (4-deoxy-4-formamido-L-arabinose) deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D Dda3937_02252 ptsG; PTS system glucose-specific IICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D Dda3937_01026 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_03270 galF; predicted regulatory subunit of UTP--glucose-1-phosphate uridylyltransferase, with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_04059 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_03269 ugd; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dda3937_03996 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dda3937_03997 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Dda3937_03998 galE; UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dda3937_04708 dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dda3937_03725 manX; PTS system mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Dda3937_03726 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D Dda3937_04593 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D Dda3937_02136 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dda3937_04125 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dda3937_00443 cpsG; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Dda3937_00442 cpsB; Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dda3937_00444 gmd; GDP-D-mannose dehydratase, NAD(P)-binding protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Dda3937_00447 fcl; GDP-L-fucose synthetase; Colanic acid biosynthesis protein wcaG K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dda3937_00332 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ddd00620]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dda3937_01176 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_02153 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_03098 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dda3937_03097 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_03350 pflB; pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Dda3937_03173 eutE; Acetaldehyde dehydrogenase (acetylating) K04021 eutE; aldehyde dehydrogenase
D Dda3937_03796 yiaY; Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_01587 yahK; predicted oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Dda3937_04019 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dda3937_04018 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dda3937_03576 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_04619 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_01892 accA; acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dda3937_04028 accB; acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02460 Biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02461 Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_01600 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_02103 accD; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dda3937_01700 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Dda3937_00988 aldB; Aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Dda3937_03144 ldhA; fermentative D-lactate dehydrogenase, NAD-dependent K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Dda3937_04613 gloA; glyoxalase I, Ni-dependent K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Dda3937_03972 gloB; predicted hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dda3937_03655 ycbL; predicted metal-binding enzyme K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dda3937_03024 ycdW; D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Dda3937_01015 tkrA; 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Dda3937_03741 sfcA; malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Dda3937_01399 maeB; NADP-linked malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dda3937_00485 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D Dda3937_01438 fumA; Fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Dda3937_04126 fumC; fumarate hydratase (fumarase C),aerobic Class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dda3937_02147 frdA; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_02146 frdB; fumarate reductase (anaerobic), Fe-S subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_02145 frdC; fumarate reductase (anaerobic), membrane anchor subunit K00246 frdC; succinate dehydrogenase subunit C
D Dda3937_02144 frdD; fumarate reductase (anaerobic), membrane anchor subunit K00247 frdD; succinate dehydrogenase subunit D
D Dda3937_02057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dda3937_00356 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dda3937_03524 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dda3937_02127 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Dda3937_03544 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Dda3937_04301 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Dda3937_02173 nifV; Homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ddd00630]
D Dda3937_02128 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dda3937_02127 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dda3937_01540 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Dda3937_04039 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dda3937_02637 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Dda3937_03164 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dda3937_03024 ycdW; D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Dda3937_01015 tkrA; 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Dda3937_01911 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Dda3937_04187 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Dda3937_00973 indB; putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Dda3937_01118 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dda3937_02384 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dda3937_02306 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dda3937_02308 gcvT; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_02307 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D Dda3937_02813 Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Dda3937_00191 garR; tartronate semialdehyde reductase (TSAR) K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Dda3937_00192 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Dda3937_02309 fucO; Lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D Dda3937_01460 yeaU; Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Dda3937_03573 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dda3937_00535 Oxalate decarboxylase oxdD K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D Dda3937_01829 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Dda3937_01830 fdoH; formate dehydrogenase-O, Fe-S subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Dda3937_01831 fdoI; formate dehydrogenase-O, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Dda3937_04046 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Dda3937_01675 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D Dda3937_01033 yfdU; Probable oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8]
C 00640 Propanoate metabolism [PATH:ddd00640]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dda3937_04019 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dda3937_04018 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_03350 pflB; pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Dda3937_00660 yhdH; predicted oxidoreductase, Zn-dependent and NAD(P)-binding protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_01892 accA; acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dda3937_04028 accB; acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02460 Biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02461 Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_01600 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_02103 accD; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dda3937_04150 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dda3937_01533 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dda3937_01532 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dda3937_01197 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Dda3937_02637 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Dda3937_02830 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D Dda3937_01258 yqhD; NADP-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D Dda3937_02786 Hypothetical oxidoreductase yqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D Dda3937_02309 fucO; Lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:ddd00650]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Dda3937_01460 yeaU; Tartrate dehydrogenase / Tartrate decarboxylase / D-malic enzyme K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Dda3937_01537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_01536 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_01539 sdhC; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dda3937_01538 sdhD; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dda3937_02147 frdA; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_02146 frdB; fumarate reductase (anaerobic), Fe-S subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_02145 frdC; fumarate reductase (anaerobic), membrane anchor subunit K00246 frdC; succinate dehydrogenase subunit C
D Dda3937_02144 frdD; fumarate reductase (anaerobic), membrane anchor subunit K00247 frdD; succinate dehydrogenase subunit D
D Dda3937_04150 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dda3937_00642 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dda3937_03350 pflB; pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Dda3937_01176 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_02153 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_02310 budB; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01361 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_02452 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_00248 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01362 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_02451 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_00249 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D Dda3937_02311 budA; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D Dda3937_03162 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific / Acetoin (diacetyl) reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D Dda3937_01341 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific / Acetoin (diacetyl) reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:ddd00660]
D Dda3937_02310 budB; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01361 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_02452 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_00248 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01362 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_02451 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_00249 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D Dda3937_02311 budA; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D Dda3937_01533 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dda3937_01532 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dda3937_01352 leuC; 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Dda3937_01353 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Dda3937_04404 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ddd00562]
D Dda3937_02289 Phospholipase C 4 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D Dda3937_01642 Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dda3937_02376 suhB; Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dda3937_01138 Probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D Dda3937_01203 idhA; Myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Dda3937_01209 mocC; Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D Dda3937_01198 Epi-inositol hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D Dda3937_01210 5-keto-2-deoxygluconokinase B K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D Dda3937_01208 5-keto-2-deoxygluconokinase / uncharacterized domain protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D Dda3937_01197 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Dda3937_03871 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ddd00190]
D Dda3937_04294 nuoA; NADH:ubiquinone oxidoreductase, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Dda3937_01797 nuoB; NADH:ubiquinone oxidoreductase, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Dda3937_01798 nuoC; NADH:ubiquinone oxidoreductase, chain C,D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D Dda3937_01799 nuoE; NADH:ubiquinone oxidoreductase, chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Dda3937_01800 nuoF; NADH:ubiquinone oxidoreductase, chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Dda3937_01801 nuoG; NADH:ubiquinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Dda3937_01802 nuoH; NADH:ubiquinone oxidoreductase, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Dda3937_01803 nuoI; NADH:ubiquinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Dda3937_01804 nuoJ; NADH:ubiquinone oxidoreductase, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Dda3937_01805 nuoK; NADH:ubiquinone oxidoreductase, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Dda3937_01806 nuoL; NADH:ubiquinone oxidoreductase, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Dda3937_01807 nuoM; NADH:ubiquinone oxidoreductase, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Dda3937_01808 nuoN; NADH:ubiquinone oxidoreductase, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Dda3937_02260 ndh; respiratory NADH dehydrogenase 2/cupric reductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Dda3937_01537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_01536 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_01539 sdhC; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dda3937_01538 sdhD; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dda3937_02147 frdA; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_02146 frdB; fumarate reductase (anaerobic), Fe-S subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_02145 frdC; fumarate reductase (anaerobic), membrane anchor subunit K00246 frdC; succinate dehydrogenase subunit C
D Dda3937_02144 frdD; fumarate reductase (anaerobic), membrane anchor subunit K00247 frdD; succinate dehydrogenase subunit D
D Dda3937_01972 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dda3937_01973 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D Dda3937_01974 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D Dda3937_01975 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D Dda3937_01976 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D Dda3937_03757 putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dda3937_01531 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dda3937_03758 putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dda3937_01883 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dda3937_01882 ybgT; Putative outer membrane lipoprotein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D Dda3937_00147 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Dda3937_00145 atpD; F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Dda3937_00146 atpG; F1 sector of membrane-bound ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Dda3937_00148 atpH; F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Dda3937_00144 atpC; F1 sector of membrane-bound ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Dda3937_00151 atpB; F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Dda3937_00149 atpF; F0 sector of membrane-bound ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Dda3937_00150 atpE; F0 sector of membrane-bound ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Dda3937_00169 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Dda3937_01691 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ddd00710]
D Dda3937_00414 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dda3937_03335 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dda3937_00413 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dda3937_00427 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dda3937_03875 glpX; Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dda3937_04318 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00659 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01333 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01334 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00416 tktA; transketolase 1, thiamin-binding protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00408 rpiA; ribose 5-phosphate isomerase, constitutive K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Dda3937_00544 prkB; predicted phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Dda3937_03871 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dda3937_04186 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dda3937_01398 talA; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Dda3937_00390 talB; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Dda3937_02057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dda3937_00356 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dda3937_01399 maeB; NADP-linked malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ddd00720]
D Dda3937_01176 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_02153 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Dda3937_03524 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dda3937_02057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dda3937_01438 fumA; Fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Dda3937_04126 fumC; fumarate hydratase (fumarase C),aerobic Class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dda3937_01537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_01536 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_01539 sdhC; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dda3937_01538 sdhD; succinate dehydrogenase, membrane subunit, binds cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dda3937_02147 frdA; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_02146 frdB; fumarate reductase (anaerobic), Fe-S subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_02145 frdC; fumarate reductase (anaerobic), membrane anchor subunit K00246 frdC; succinate dehydrogenase subunit C
D Dda3937_02144 frdD; fumarate reductase (anaerobic), membrane anchor subunit K00247 frdD; succinate dehydrogenase subunit D
D Dda3937_01532 sucD; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dda3937_01533 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dda3937_02082 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dda3937_04039 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dda3937_02637 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Dda3937_01892 accA; acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dda3937_04028 accB; acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02460 Biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02461 Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_01600 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_02103 accD; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dda3937_00742 fdhF; Formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D Dda3937_01676 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Dda3937_03890 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Dda3937_04018 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dda3937_04019 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ddd00680]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_00470 yeiG; Putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D Dda3937_01829 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Dda3937_01830 fdoH; formate dehydrogenase-O, Fe-S subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Dda3937_01831 fdoI; formate dehydrogenase-O, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Dda3937_00742 fdhF; Formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D Dda3937_02384 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dda3937_00198 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dda3937_02057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dda3937_00413 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dda3937_00427 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dda3937_03875 glpX; Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_04019 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dda3937_04018 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dda3937_03524 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dda3937_03989 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_00399 ytjC; phosphoglyceromutase 2, co-factor independent K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_00861 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_00407 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_04327 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_01041 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_02676 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ddd00910]
D Dda3937_03788 narK; nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Dda3937_01845 nasF; Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Dda3937_01846 nasE; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D Dda3937_01847 nasD; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Dda3937_03791 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03792 narH; nitrate reductase 1, beta (Fe-S) subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03794 narI; nitrate reductase 1, gamma (cytochrome b(NR)) subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_01849 nasA; nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D Dda3937_01848 nirB; Nitrite reductase [NAD(P)H] large subunit K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4]
D Dda3937_02156 nifD; Nitrogenase (molybdenum-iron) alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Dda3937_02157 nifK; Nitrogenase (molybdenum-iron) beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Dda3937_02155 nifH; Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Dda3937_02367 hcp; Hybrid cluster protein [4Fe-2S-2O] protein in anaerobic terminal reductases K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Dda3937_04568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Dda3937_01118 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dda3937_00709 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dda3937_00708 gltD; glutamate synthase, 4Fe-4S protein, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Dda3937_03590 cynS; Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D Dda3937_03591 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Dda3937_04073 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ddd00920]
D Dda3937_02639 sbp; sulfate transporter subunit; periplasmic-binding component of ABC superfamily K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Dda3937_03506 cysU; Sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Dda3937_03505 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Dda3937_03504 cysA; sulfate/thiosulfate transporter subunit; ATP-binding component of ABC superfamily K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Dda3937_03511 ssuA; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03017 atsR; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03002 atsR; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_04315 Taurine transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03509 ssuC; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03021 astB; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03003 atsB; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_04123 Taurine transport system permease protein tauC K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03508 ssuB; Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_03004 astC; Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_04124 Taurine transport ATP-binding protein tauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_03510 ssuD; Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D Dda3937_03512 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D Dda3937_03902 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dda3937_00213 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dda3937_03903 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Dda3937_00161 cysQ; PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Dda3937_00211 cysH; 3'-phosphoadenosine-5'-phosphosulfate sulfotransferase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Dda3937_00209 cysJ; sulfite reductase, alpha subunit, flavoprotein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Dda3937_00210 cysI; sulfite reductase, beta subunit, NAD(P)-binding protein, heme-binding protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Dda3937_03699 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dda3937_00336 glpE; thiosulfate:cyanide sulfurtransferase (rhodanese) K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D Dda3937_02049 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dda3937_03313 Putative cysteine synthase/cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_01428 cysK; cysteine synthase A, O-acetylserine sulfhydrolase A subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_02621 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_00138 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_02126 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Dda3937_01292 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dda3937_03888 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ddd00061]
D Dda3937_01892 accA; acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dda3937_04028 accB; acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02460 Biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dda3937_02461 Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_01600 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dda3937_02103 accD; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dda3937_04625 acpP; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D Dda3937_04204 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dda3937_03616 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_04203 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_04302 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_00959 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_02115 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dda3937_01221 3-oxoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dda3937_02246 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dda3937_03279 Probable short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_04626 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_03410 fabA; beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Dda3937_01887 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dda3937_03108 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dda3937_02453 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ddd00071]
D Dda3937_02076 fadA; 3-ketoacyl-CoA thiolase (thiolase I) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_00488 fadI; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_00926 fadE; medium-long-chain fatty acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Dda3937_02453 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dda3937_02592 aas; bifunctional 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Dda3937_03796 yiaY; Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ddd00561]
D Dda3937_00192 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Dda3937_01587 yahK; predicted oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Dda3937_03876 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dda3937_01340 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dda3937_02724 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D Dda3937_04202 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Dda3937_00171 ygiH; conserved inner membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dda3937_01255 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dda3937_02725 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Dda3937_03029 rafA; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ddd00564]
D Dda3937_02048 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Dda3937_00317 glpA; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Dda3937_00335 glpD; sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Dda3937_00318 glpB; sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D Dda3937_00319 glpC; sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D Dda3937_02724 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D Dda3937_00171 ygiH; conserved inner membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dda3937_01255 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dda3937_02725 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Dda3937_02289 Phospholipase C 4 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D Dda3937_00307 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D Dda3937_00313 pldB; lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5]
D Dda3937_02910 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dda3937_03045 ugpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dda3937_01641 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dda3937_00315 glpQ; periplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dda3937_02592 aas; bifunctional 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D Dda3937_03000 cdh; CDP-diacylglycerol phosphotidylhydrolase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D Dda3937_04310 cdsA; CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Dda3937_00887 pssA; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Dda3937_03171 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Dda3937_02150 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Dda3937_03958 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Dda3937_01959 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Dda3937_04035 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D Dda3937_03382 yfhB; conserved protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D Dda3937_00561 cls; cardiolipin synthase 1 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Dda3937_04007 ybhO; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ddd00565]
D Dda3937_00307 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D Dda3937_02289 Phospholipase C 4 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:ddd00600]
D Dda3937_00746 lacZ; Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Dda3937_03029 rafA; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D Dda3937_00307 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D Dda3937_00307 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ddd00592]
D Dda3937_00307 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D Dda3937_02076 fadA; 3-ketoacyl-CoA thiolase (thiolase I) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_00488 fadI; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ddd01040]
D Dda3937_01790 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Dda3937_03307 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Dda3937_00566 yciA; esterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ddd00230]
D Dda3937_04303 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Dda3937_00362 nudE; ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D Dda3937_02326 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_00034 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Dda3937_02099 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Dda3937_00243 purD; phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Dda3937_02516 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Dda3937_03571 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D Dda3937_03379 purL; phosphoribosylformyl-glycineamide synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Dda3937_02515 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Dda3937_01683 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Dda3937_01682 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Dda3937_02505 purC; phosphoribosylaminoimidazole-succinocarboxamide synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Dda3937_02087 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dda3937_00284 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dda3937_00244 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dda3937_03292 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Dda3937_04493 ushA; UDP-sugar hydrolase; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Dda3937_00360 yrfG; predicted hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D Dda3937_02325 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Dda3937_01933 yaiE; conserved protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Dda3937_01573 yfiH; conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Dda3937_04072 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Dda3937_00004 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Dda3937_03701 ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dda3937_00400 yjjX; hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D Dda3937_02597 yggV; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Dda3937_00931 gpt; guanine-xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Dda3937_03588 Glutamine amidotransferase, class I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dda3937_01827 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dda3937_00005 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dda3937_02240 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D Dda3937_04713 Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D Dda3937_01129 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Dda3937_04165 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dda3937_03977 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dda3937_04164 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dda3937_03976 nrdF; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dda3937_01273 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Dda3937_00497 dgt; deoxyguanosine triphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Dda3937_04026 yfbR; nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D Dda3937_01127 spoT; GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Dda3937_01692 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Dda3937_00264 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Dda3937_00195 relA; GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D Dda3937_00294 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D Dda3937_02901 cyaB; Adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D Dda3937_00429 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dda3937_00606 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D Dda3937_00834 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D Dda3937_00870 ygdH; conserved protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D Dda3937_00160 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Dda3937_03287 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dda3937_00196 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Dda3937_01249 cpdA; Icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Dda3937_02269 Icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Dda3937_01383 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D Dda3937_03903 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Dda3937_03902 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dda3937_00213 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dda3937_02652 yedX; Transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Dda3937_02651 Uricase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D Dda3937_00906 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D Dda3937_00907 hypothetical protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D Dda3937_00918 allC; N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Dda3937_00917 pucG; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D Dda3937_00909 Probable amidase K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
D Dda3937_00911 Gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:ddd00240]
D Dda3937_01389 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dda3937_01390 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dda3937_01284 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Dda3937_01283 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D Dda3937_03554 pyrC; dihydro-orotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dda3937_03514 pyrD; dihydro-orotate oxidase, FMN-linked K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Dda3937_02624 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Dda3937_03258 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Dda3937_04038 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Dda3937_00881 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Dda3937_03701 ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dda3937_00196 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Dda3937_00665 yhdE; conserved protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Dda3937_00197 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Dda3937_04066 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Dda3937_03933 udk; uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Dda3937_04493 ushA; UDP-sugar hydrolase; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Dda3937_02055 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D Dda3937_01933 yaiE; conserved protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Dda3937_02514 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dda3937_00160 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Dda3937_00974 indA; indigoidine biosynthesis protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Dda3937_01392 rihC; ribonucleoside hydrolase 3 K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-]
D Dda3937_00870 ygdH; conserved protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D Dda3937_03742 cdd; cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Dda3937_02604 codA; Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Dda3937_01273 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Dda3937_03932 dcd; 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Dda3937_04165 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dda3937_03977 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dda3937_04164 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dda3937_03976 nrdF; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dda3937_04026 yfbR; nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D Dda3937_02249 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Dda3937_03260 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Dda3937_02327 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D Dda3937_04057 tdk; thymidine kinase/deoxyuridine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Dda3937_00851 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Dda3937_04134 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ddd00250]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03843 nadB; quinolinate synthase, L-aspartate oxidase (B protein) subunit K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Dda3937_00744 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Dda3937_02690 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Dda3937_01931 asnA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dda3937_04331 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dda3937_03246 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dda3937_00919 yafV; Possible hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Dda3937_04027 yfbQ; predicted aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dda3937_02718 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D Dda3937_00977 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dda3937_04707 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dda3937_00429 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dda3937_02087 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dda3937_00284 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dda3937_01284 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Dda3937_01283 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D Dda3937_04150 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dda3937_00642 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dda3937_00709 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dda3937_00708 gltD; glutamate synthase, 4Fe-4S protein, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Dda3937_00258 putA; Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Dda3937_01118 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dda3937_01389 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dda3937_01390 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dda3937_00141 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dda3937_02099 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ddd00260]
D Dda3937_02135 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dda3937_00394 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dda3937_03889 metL; bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D Dda3937_00326 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dda3937_00393 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Dda3937_00392 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Dda3937_02384 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dda3937_03024 ycdW; D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Dda3937_01015 tkrA; 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D Dda3937_00192 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Dda3937_03989 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_00399 ytjC; phosphoglyceromutase 2, co-factor independent K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_00861 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_00407 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_04327 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_01041 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_02676 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Dda3937_04134 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D Dda3937_02042 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dda3937_02043 tdh; threonine 3-dehydrogenase, NAD(P)-binding protein K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D Dda3937_02306 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dda3937_02308 gcvT; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_02307 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D Dda3937_00887 pssA; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Dda3937_03411 betA; Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D Dda3937_03412 betB; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D Dda3937_03721 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dda3937_01685 sdaB; L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dda3937_00252 ilvA; Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dda3937_01146 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D Dda3937_00572 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Dda3937_00573 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Dda3937_02856 acsF; 4-aminobutyrate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:ddd00270]
D Dda3937_02049 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dda3937_03313 Putative cysteine synthase/cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_01428 cysK; cysteine synthase A, O-acetylserine sulfhydrolase A subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_02621 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_00138 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dda3937_01261 metC; cystathionine beta-lyase, PLP-dependent K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Dda3937_02131 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dda3937_01929 Methionine synthase II (cobalamin-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dda3937_04145 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dda3937_02053 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dda3937_00420 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Dda3937_03980 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Dda3937_00021 speE; spermidine synthase (putrescine aminopropyltransferase) K00797 speE; spermidine synthase [EC:2.5.1.16]
D Dda3937_03219 expI; Homoserine lactone synthase YpeI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Dda3937_00498 pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Dda3937_00925 mtrK; 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D Dda3937_01573 yfiH; conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Dda3937_00924 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Dda3937_00921 Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D Dda3937_00922 masA; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D Dda3937_00923 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D Dda3937_03452 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Dda3937_03781 yebR; conserved protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Dda3937_03941 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Dda3937_02864 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Dda3937_02135 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dda3937_00394 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dda3937_03889 metL; bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D Dda3937_00326 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dda3937_02126 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Dda3937_01292 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dda3937_03888 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Dda3937_00632 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_00250 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_03940 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Dda3937_00424 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Dda3937_03091 Putative glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03699 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dda3937_03529 mdh; malate dehydrogenase, NAD(P)-binding protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dda3937_02691 dcyD; D-cysteine desulfhydrase, PLP-dependent K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D Dda3937_03721 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dda3937_01685 sdaB; L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dda3937_01414 cysM; cysteine synthase B (O-acetylserine sulfhydrolase B) K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Dda3937_00861 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_00407 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_04327 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_01041 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ddd00280]
D Dda3937_00632 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_00250 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_02076 fadA; 3-ketoacyl-CoA thiolase (thiolase I) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_00488 fadI; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_01197 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ddd00290]
D Dda3937_00252 ilvA; Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dda3937_01352 leuC; 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Dda3937_01353 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Dda3937_04404 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Dda3937_02310 budB; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01361 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_02452 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_00248 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01362 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_02451 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_00249 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D Dda3937_00256 ilvC; ketol-acid reductoisomerase, NAD(P)-binding protein K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Dda3937_00251 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Dda3937_00632 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_00250 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_01017 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D Dda3937_04027 yfbQ; predicted aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dda3937_03544 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Dda3937_04301 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ddd00300]
D Dda3937_02135 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dda3937_00394 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dda3937_03889 metL; bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D Dda3937_00326 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dda3937_02997 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_02507 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_02529 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_02630 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_00342 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_01391 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Dda3937_00876 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Dda3937_00547 argD; Ornithine aminotransferase; Acetylornithine aminotransferase; N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Dda3937_02499 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Dda3937_03183 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Dda3937_00297 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Dda3937_02853 acsE; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dda3937_02577 lysA; diaminopimelate decarboxylase, PLP-binding protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dda3937_03216 virA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dda3937_02443 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dda3937_02442 murF; UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ddd00310]
D Dda3937_01534 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_01188 Ornithine aminotransferase; Acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Dda3937_02686 ygjG; Ornithine aminotransferase; Acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Dda3937_02687 ydcW; 4-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D Dda3937_00642 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dda3937_00003 ydiJ; predicted FAD-linked oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D Dda3937_01040 Lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Dda3937_00800 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_02409 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:ddd00220]
D Dda3937_01287 argI; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Dda3937_00977 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dda3937_04707 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dda3937_01002 Urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D Dda3937_02462 Allophanate hydrolase subunit 1 family K01941 uca; urea carboxylase [EC:6.3.4.6]
D Dda3937_00903 Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Dda3937_01118 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dda3937_01389 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dda3937_01390 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_04027 yfbQ; predicted aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dda3937_00857 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Dda3937_02060 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Dda3937_02059 argC; N-acetyl-gamma-glutamylphosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Dda3937_00547 argD; Ornithine aminotransferase; Acetylornithine aminotransferase; N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Dda3937_03188 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D Dda3937_02058 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ddd00330]
D Dda3937_02604 codA; Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Dda3937_00418 speA; biosynthetic arginine decarboxylase, PLP-binding protein K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Dda3937_03869 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Dda3937_03868 putative N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Dda3937_03405 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Dda3937_00021 speE; spermidine synthase (putrescine aminopropyltransferase) K00797 speE; spermidine synthase [EC:2.5.1.16]
D Dda3937_03980 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Dda3937_01188 Ornithine aminotransferase; Acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Dda3937_02686 ygjG; Ornithine aminotransferase; Acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Dda3937_02687 ydcW; 4-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D Dda3937_01793 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D Dda3937_00280 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dda3937_02600 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Dda3937_00258 putA; Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Dda3937_00936 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Dda3937_00937 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_00800 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_02409 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:ddd00340]
D Dda3937_02972 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Dda3937_02979 hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Dda3937_02977 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Dda3937_02976 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Dda3937_02978 hisF; imidazole glycerol phosphate synthase, catalytic subunit with HisH K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Dda3937_02975 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D Dda3937_02974 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dda3937_00635 Inositol monophosphatase family protein K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Dda3937_02973 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Dda3937_01661 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Dda3937_01667 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Dda3937_01660 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Dda3937_01674 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Dda3937_01673 Formiminoglutamic iminohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D Dda3937_01675 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D Dda3937_00519 Glutamate decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22]
C 00350 Tyrosine metabolism [PATH:ddd00350]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_02974 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dda3937_03452 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Dda3937_01069 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Dda3937_03796 yiaY; Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Dda3937_00642 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dda3937_02692 malate/lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D Dda3937_02253 hypothetical oxidoreductase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:ddd00360]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_02974 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dda3937_03452 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Dda3937_02839 yhhY; Putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D Dda3937_01069 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Dda3937_02928 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Dda3937_00800 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_02409 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_02692 malate/lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D Dda3937_02253 hypothetical oxidoreductase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D Dda3937_00765 Catalase / Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D Dda3937_00280 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:ddd00380]
D Dda3937_01534 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_01355 tnaA; Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D Dda3937_04568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Dda3937_01279 iaaM; Tryptophan 2-monooxygenase K00466 iaaM; tryptophan 2-monooxygenase [EC:1.13.12.3]
D Dda3937_00280 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dda3937_01280 iaaH; Indoleacetamide hydrolase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D Dda3937_03164 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dda3937_00765 Catalase / Peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ddd00400]
D Dda3937_03987 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dda3937_03522 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dda3937_01566 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dda3937_04183 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Dda3937_04029 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Dda3937_01528 aroE; dehydroshikimate reductase, NAD(P)-binding protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Dda3937_01932 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Dda3937_04182 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Dda3937_04065 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Dda3937_00493 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Dda3937_00577 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dda3937_00576 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Dda3937_00575 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Dda3937_00574 trpC; Indole-3-glycerol phosphate synthase / Phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D Dda3937_00572 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Dda3937_00573 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Dda3937_01567 tyrA; chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D Dda3937_02868 Chorismate mutase I precursor K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D Dda3937_01568 pheA; Chorismate mutase I / Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Dda3937_03448 Arogenate dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_02974 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dda3937_03452 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ddd00410]
D Dda3937_00517 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Dda3937_04150 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dda3937_02687 ydcW; 4-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D Dda3937_00516 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_01197 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ddd00430]
D Dda3937_01862 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dda3937_04018 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dda3937_04019 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ddd00440]
D Dda3937_04090 phnI; PhnI protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D Dda3937_04088 phnG; PhnG protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D Dda3937_04089 phnH; PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D Dda3937_04093 phnL; Phosphonates transport ATP-binding protein phnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D Dda3937_04094 phnM; Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D Dda3937_04091 phnJ; PhnJ protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D Dda3937_04096 phnP; Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ddd00450]
D Dda3937_03888 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Dda3937_01261 metC; cystathionine beta-lyase, PLP-dependent K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Dda3937_02131 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dda3937_01929 Methionine synthase II (cobalamin-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dda3937_04145 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dda3937_02053 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Dda3937_03665 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Dda3937_03631 trxB; thioredoxin reductase, FAD/NAD(P)-binding protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Dda3937_03902 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dda3937_00213 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dda3937_03935 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ddd00460]
D Dda3937_02895 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Dda3937_03745 bgxA; Beta-glucosidase (Gentiobiase) (Cellobiase) / Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Dda3937_04568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Dda3937_01862 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dda3937_01931 asnA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dda3937_04331 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dda3937_03246 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dda3937_02384 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ddd00470]
D Dda3937_03446 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D Dda3937_00800 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_02409 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_01186 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dda3937_03194 D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03212 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03211 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03193 D-alanine carrier protein DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Dda3937_03898 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Dda3937_02440 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dda3937_03254 EBNA-1 nuclear protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D Dda3937_00798 EBNA-1 nuclear protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D Dda3937_03253 ycjG; Muconate cycloisomerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Dda3937_00799 mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Dda3937_00744 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Dda3937_02690 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Dda3937_01146 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D Dda3937_00297 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Dda3937_02853 acsE; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dda3937_02577 lysA; diaminopimelate decarboxylase, PLP-binding protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dda3937_03216 virA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dda3937_02928 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ddd00480]
D Dda3937_01862 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dda3937_00116 chaC; Cation transport protein chaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D Dda3937_00650 Lactam utilization protein LAMB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Dda3937_02459 Lactam utilization protein LAMB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Dda3937_01542 ybgL; predicted lactam utilization protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Dda3937_01544 ybgJ; predicted enzyme subunit K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D Dda3937_00651 Allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D Dda3937_01543 ybgK; predicted enzyme subunit K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D Dda3937_03940 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Dda3937_00424 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Dda3937_03091 Putative glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Dda3937_01298 pepA; aminopeptidase A, a cyteinylglycinase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Dda3937_03696 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D Dda3937_04343 pepN; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Dda3937_00930 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Dda3937_01237 Glutathione S-transferase, theta K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_00134 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_04603 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_00090 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_02898 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_03492 yliJ; predicted glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_02121 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_01050 gor; glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Dda3937_02082 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dda3937_04507 gnd; gluconate-6-phosphate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Dda3937_03574 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dda3937_03647 btuE; predicted glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Dda3937_03891 Peroxiredoxin family protein/glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D Dda3937_03405 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Dda3937_00021 speE; spermidine synthase (putrescine aminopropyltransferase) K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ddd00511]
D Dda3937_00746 lacZ; Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:ddd00540]
D Dda3937_01888 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Dda3937_02232 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Dda3937_01886 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Dda3937_01681 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Dda3937_01889 lpxB; tetraacyldisaccharide-1-P synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Dda3937_03204 lpxK; lipid A 4'kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Dda3937_00687 kdsD; D-Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Dda3937_00038 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Dda3937_00686 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Dda3937_03202 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Dda3937_02033 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Dda3937_03561 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dda3937_04573 lpxM; acyl (myristate) transferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D Dda3937_02587 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase lpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D Dda3937_03831 yeiU; undecaprenyl pyrophosphate phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D Dda3937_00525 yjdB; Putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Dda3937_01131 eptB; predicted metal dependent hydrolase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D Dda3937_02050 crcA; Lipid A acylation protein PagP, palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D Dda3937_01076 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D Dda3937_02265 ddg; Lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D Dda3937_00927 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Dda3937_00178 rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D Dda3937_04390 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Dda3937_02041 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding protein K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Dda3937_02039 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Dda3937_02040 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Dda3937_02038 rfaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D Dda3937_02037 waaG; UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ddd00542]
D Dda3937_00268 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ddd00541]
D Dda3937_03270 galF; predicted regulatory subunit of UTP--glucose-1-phosphate uridylyltransferase, with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_04059 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Dda3937_03998 galE; UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dda3937_03269 ugd; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dda3937_04708 dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Dda3937_03923 rffH; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dda3937_03924 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dda3937_03922 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dda3937_03921 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Dda3937_00273 rffA; dTDP-4-keto-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D Dda3937_00272 rffC; dTDP-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D Dda3937_04125 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dda3937_00443 cpsG; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Dda3937_00442 cpsB; Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dda3937_00444 gmd; GDP-D-mannose dehydratase, NAD(P)-binding protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Dda3937_00447 fcl; GDP-L-fucose synthetase; Colanic acid biosynthesis protein wcaG K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dda3937_00142 glmU; bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Dda3937_00270 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dda3937_00271 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Dda3937_02274 Nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D Dda3937_02273 UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:ddd00550]
D Dda3937_00695 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dda3937_04216 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dda3937_02437 murC; UDP-N-acetylmuramate:L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Dda3937_02440 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dda3937_02443 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dda3937_01186 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dda3937_02442 murF; UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dda3937_00884 ispU; undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Dda3937_00173 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dda3937_02441 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dda3937_02438 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Dda3937_00715 mtgA; biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Dda3937_00363 mrcA; penicillin-binding protein 1A (PBP1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dda3937_04295 mrcB; penicillin-binding protein 1B (PBP1B) K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D Dda3937_02483 mrdA; peptidoglycan synthetase, penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Dda3937_00764 penicillin binding protein, peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_02444 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_03486 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Dda3937_02486 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Dda3937_02351 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ddd00552]
D Dda3937_00173 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dda3937_00268 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Dda3937_03194 D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03212 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03211 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03193 D-alanine carrier protein DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Dda3937_03195 D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D Dda3937_00956 Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D Dda3937_02274 Nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ddd00543]
D Dda3937_02698 wcaB; Colanic acid biosynthesis acetyltransferase wcaB K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-]
D Dda3937_00268 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Dda3937_00277 rffM; UDP-N-acetyl-D-mannosaminuronic acid (ManNAcA) transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D Dda3937_00275 rffT; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D Dda3937_02049 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ddd00730]
D Dda3937_00235 thiC; thiamin (pyrimidine moiety) biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Dda3937_02807 thiD; bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Dda3937_00233 thiF; thiamin (thiazole moiety) biosynthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D Dda3937_02172 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_04379 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_01963 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Dda3937_00230 thiH; thiamin biosynthesis ThiGH complex subunit K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Dda3937_01960 dxs; 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Dda3937_00231 thiG; thiamin biosynthesis ThiGH complex subunit K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Dda3937_02806 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Dda3937_00234 thiE; thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Dda3937_01958 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Dda3937_02151 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Dda3937_03870 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dda3937_02257 thiK; thiamin kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D Dda3937_03287 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ddd00740]
D Dda3937_00140 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Dda3937_04041 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Dda3937_01955 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Dda3937_00300 yigB; FMN phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D Dda3937_01433 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D Dda3937_01956 ribE; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Dda3937_04105 ribC; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Dda3937_00380 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Dda3937_01138 Probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D Dda3937_02071 fre; flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D Dda3937_03512 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D Dda3937_02806 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Dda3937_04303 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Dda3937_02084 ymfB; thiamin pyrophosphate (TPP) hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D Dda3937_00101 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ddd00750]
D Dda3937_00091 pdxY; pyridoxal kinase 2/pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Dda3937_04097 ydbC; Hypothetical oxidoreductase ydbC K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Dda3937_00415 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D Dda3937_02107 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D Dda3937_04327 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_01041 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_01380 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Dda3937_03853 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Dda3937_00392 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ddd00760]
D Dda3937_03843 nadB; quinolinate synthase, L-aspartate oxidase (B protein) subunit K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Dda3937_03984 nadA; quinolinate synthase, subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Dda3937_02244 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Dda3937_03507 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Dda3937_02325 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Dda3937_02678 nadR; NadR transcriptional repressor / ribosylnicotinamide kinase / NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D Dda3937_04493 ushA; UDP-sugar hydrolase; 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Dda3937_02480 nadD; nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Dda3937_00196 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Dda3937_00237 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Dda3937_03367 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Dda3937_03155 ygaD; conserved protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Dda3937_04576 pncA; nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Dda3937_03645 cobB; deacetylase of acetyl-CoA synthetase, NAD-dependent K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Dda3937_02546 yfjB; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Dda3937_03893 sthA; Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D Dda3937_00078 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Dda3937_04585 pntB; pyridine nucleotide transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Dda3937_00642 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ddd00770]
D Dda3937_02310 budB; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01361 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_02452 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_00248 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dda3937_01362 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_02451 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dda3937_00249 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D Dda3937_00256 ilvC; ketol-acid reductoisomerase, NAD(P)-binding protein K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Dda3937_00251 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Dda3937_00515 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Dda3937_01965 panE; 2-dehydropantoate reductase, NADPH-specific K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Dda3937_04144 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Dda3937_00516 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Dda3937_04218 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D Dda3937_03261 dfp; bifunctional 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN-binding protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Dda3937_00196 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Dda3937_02031 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Dda3937_02239 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Dda3937_03854 acpS; holo-[acyl-carrier-protein] synthase 1 K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Dda3937_00961 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Dda3937_01946 acpH; ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D Dda3937_00632 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_00250 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_00517 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ddd00780]
D Dda3937_03750 bioC; predicted methltransferase, enzyme of biotin synthesis K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Dda3937_02115 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dda3937_01221 3-oxoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dda3937_02246 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dda3937_03279 Probable short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_04626 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_01887 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dda3937_03108 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dda3937_00350 bioH; carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Dda3937_03749 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Dda3937_03747 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Dda3937_03751 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Dda3937_04131 ynfK; predicted dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Dda3937_03748 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Dda3937_04217 birA; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/DNA-binding protein transcriptional repressor, bio-5'-AMP-binding protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ddd00785]
D Dda3937_02488 lipB; lipoyl-protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Dda3937_02489 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Dda3937_03650 lplA; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_03098 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dda3937_03097 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dda3937_01535 sucA; 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Dda3937_01534 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dda3937_02306 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dda3937_02308 gcvT; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dda3937_02307 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ddd00790]
D Dda3937_03497 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Dda3937_03870 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dda3937_01617 nudB; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D Dda3937_00172 folB; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Dda3937_00514 folK; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Dda3937_02346 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Dda3937_01385 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Dda3937_02102 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Dda3937_00140 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Dda3937_04041 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Dda3937_00548 pabA; aminodeoxychorismate synthase, subunit II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D Dda3937_03719 pabB; aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Dda3937_02247 pabC; 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Dda3937_00205 ygcM; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Dda3937_00204 ygcF; conserved protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Dda3937_03314 queC; enzyme in preQ0 biosynthesis K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Dda3937_01462 queF; NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Dda3937_03761 moaA; molybdopterin biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Dda3937_03763 moaC; molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Dda3937_03765 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Dda3937_00388 mog; putative molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Dda3937_03762 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Dda3937_03740 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Dda3937_01108 mobA; Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ddd00670]
D Dda3937_01385 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Dda3937_01676 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Dda3937_02384 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dda3937_02516 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Dda3937_00244 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dda3937_01522 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Dda3937_02308 gcvT; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dda3937_02131 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dda3937_00851 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Dda3937_04046 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Dda3937_03890 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Dda3937_02679 ygfA; predicted ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ddd00860]
D Dda3937_03502 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dda3937_00037 hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Dda3937_00503 hemL; glutamate-1-semialdehyde aminotransferase (aminomutase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dda3937_02069 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Dda3937_00293 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Dda3937_00292 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Dda3937_00238 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Dda3937_01401 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Dda3937_01115 hemN; coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Dda3937_02081 hemG; protoporphyrin oxidase, flavoprotein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D Dda3937_03286 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Dda3937_00291 hemX; predicted uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Dda3937_00212 cysG1; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Dda3937_01850 nirE; Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Dda3937_01972 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dda3937_00581 btuR; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dda3937_04412 bfr; bacterioferritin, iron storage and detoxification protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ddd00130]
D Dda3937_02722 ubiC; chorismate pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D Dda3937_02723 ubiA; p-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Dda3937_00101 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Dda3937_02684 visC; predicted oxidoreductase with FAD/NAD(P)-binding domain K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D Dda3937_01773 ubiG; bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Dda3937_02683 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Dda3937_02062 ubiE; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Dda3937_02466 ubiF; 2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D Dda3937_01780 menF; isochorismate synthase 2 K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D Dda3937_02434 cbsC; isochorismate hydroxymutase 2, chrysobactin biosynthesis K02361 entC; isochorismate synthase [EC:5.4.4.2]
D Dda3937_01781 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Dda3937_01782 yfbB; predicted peptidase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D Dda3937_01784 menC; o-succinylbenzoyl-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Dda3937_01215 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Dda3937_01785 menE; o-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Dda3937_01783 menB; dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Dda3937_02430 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Dda3937_00002 ydiI; esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Dda3937_03881 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Dda3937_03736 Multimeric flavodoxin WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Dda3937_01648 ytfG; NAD(P)H:quinone oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Dda3937_01069 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ddd00900]
D Dda3937_01960 dxs; 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Dda3937_00883 dxr; 1-deoxy-d-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Dda3937_03906 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Dda3937_00035 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Dda3937_03907 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Dda3937_03705 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Dda3937_01393 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Dda3937_00101 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Dda3937_01961 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Dda3937_03525 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Dda3937_00884 ispU; undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ddd00907]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_02076 fadA; 3-ketoacyl-CoA thiolase (thiolase I) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_00488 fadI; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Dda3937_04318 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00659 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01333 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_01334 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dda3937_00416 tktA; transketolase 1, thiamin-binding protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ddd00523]
D Dda3937_03923 rffH; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dda3937_03924 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dda3937_03922 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dda3937_03921 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:ddd01054]
D Dda3937_00744 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Dda3937_02690 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ddd01053]
D Dda3937_01780 menF; isochorismate synthase 2 K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D Dda3937_02434 cbsC; isochorismate hydroxymutase 2, chrysobactin biosynthesis K02361 entC; isochorismate synthase [EC:5.4.4.2]
D Dda3937_02432 cbsB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase, chrysobactin biosynthesis K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D Dda3937_02431 cbsA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, chrysobactin biosynthesis K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D Dda3937_02667 4'-phosphopantetheinyl transferase entD K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D Dda3937_02433 cbsE; 2,3-dihydroxybenzoate-AMP ligase, chrysobactin biosynthesis K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01055 Biosynthesis of vancomycin group antibiotics
D Dda3937_03924 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ddd00946]
D Dda3937_02895 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Dda3937_03745 bgxA; Beta-glucosidase (Gentiobiase) (Cellobiase) / Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Dda3937_03131 Family S45 unassigned peptidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:ddd00332]
D Dda3937_00936 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Dda3937_00937 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ddd00261]
D Dda3937_03039 MbtH-like protein K05375 mbtH; MbtH protein
D Dda3937_03902 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Dda3937_00213 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Dda3937_02135 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dda3937_00394 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Dda3937_03889 metL; bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D Dda3937_00326 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dda3937_02997 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_02507 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_02529 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_02630 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_00342 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Dda3937_01391 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ddd00521]
D Dda3937_01026 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Dda3937_01555 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dda3937_01642 Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dda3937_02376 suhB; Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dda3937_01203 idhA; Myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Dda3937_03923 rffH; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dda3937_03924 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Dda3937_03922 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Dda3937_03921 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Dda3937_01026 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ddd00525]
D Dda3937_03923 rffH; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dda3937_03924 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ddd00401]
D Dda3937_01567 tyrA; chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_02974 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dda3937_03452 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Dda3937_00577 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dda3937_00576 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Dda3937_04204 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dda3937_03279 Probable short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_04626 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_03108 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Dda3937_04625 acpP; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ddd00999]
D Dda3937_00420 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Dda3937_01528 aroE; dehydroshikimate reductase, NAD(P)-binding protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Dda3937_02895 bglX; Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Dda3937_03745 bgxA; Beta-glucosidase (Gentiobiase) (Cellobiase) / Beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ddd00997]
D Dda3937_01910 Pyoverdine biosynthesis protein PvcA K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D Dda3937_02851 acsC; achromobactin siderophore NIS synthase K23374 sbnF; 2-[(L-alanin-3-ylcarbamoyl)methyl]-3-(2-aminoethylcarbamoyl)-2-hydroxypropanoate synthase [EC:6.3.2.55]
D Dda3937_02849 acsA; achromobactin siderophore NIS synthase K23375 sbnC; staphyloferrin B synthase [EC:6.3.2.56]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ddd00362]
D Dda3937_02076 fadA; 3-ketoacyl-CoA thiolase (thiolase I) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_00488 fadI; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_04147 ydcE; Probable tautomerase ydcE K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Dda3937_02002 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Dda3937_01048 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D Dda3937_03694 fdx; [2Fe-2S] ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:ddd00627]
D Dda3937_00280 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dda3937_04568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Dda3937_01700 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Dda3937_00101 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:ddd00364]
D Dda3937_00700 Putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Dda3937_02054 ysgA; Putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ddd00625]
D Dda3937_03796 yiaY; Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Dda3937_02157 nifK; Nitrogenase (molybdenum-iron) beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Dda3937_02155 nifH; Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Dda3937_02156 nifD; Nitrogenase (molybdenum-iron) alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ddd00361]
D Dda3937_00700 Putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Dda3937_02054 ysgA; Putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:ddd00623]
D Dda3937_00700 Putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Dda3937_02054 ysgA; Putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D Dda3937_04147 ydcE; Probable tautomerase ydcE K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Dda3937_02002 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ddd00633]
D Dda3937_03480 nfsA; Oxygen-insensitive NADPH nitroreductase K10678 nfsA; nitroreductase [EC:1.-.-.-]
D Dda3937_01816 hybC; hydrogenase 2, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Dda3937_01813 hybO; hydrogenase 2, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D Dda3937_02076 fadA; 3-ketoacyl-CoA thiolase (thiolase I) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dda3937_00488 fadI; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ddd00643]
D Dda3937_00280 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dda3937_04568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation [PATH:ddd00791]
D Dda3937_00903 Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Dda3937_01002 Urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D Dda3937_02462 Allophanate hydrolase subunit 1 family K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation [PATH:ddd00930]
D Dda3937_02077 fadB; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Dda3937_00489 yfcX; Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D Dda3937_04147 ydcE; Probable tautomerase ydcE K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Dda3937_02002 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ddd00626]
D Dda3937_03796 yiaY; Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Dda3937_00069 adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Dda3937_04056 adhE; fused acetaldehyde-CoA dehydrogenase and iron-dependent alcohol dehydrogenase and pyruvate-formate lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ddd03020]
D Dda3937_00220 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dda3937_00221 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dda3937_01515 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dda3937_01128 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ddd03010]
D Dda3937_04328 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Dda3937_00879 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Dda3937_01499 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Dda3937_01514 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Dda3937_01508 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Dda3937_02617 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Dda3937_03982 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Dda3937_01505 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Dda3937_00702 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Dda3937_01494 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Dda3937_01513 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Dda3937_04413 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Dda3937_01512 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Dda3937_04411 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Dda3937_02338 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Dda3937_03945 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Dda3937_01502 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Dda3937_02619 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Dda3937_01497 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Dda3937_00381 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Dda3937_03532 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Dda3937_00218 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Dda3937_04706 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D Dda3937_04221 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Dda3937_01495 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Dda3937_01504 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Dda3937_01506 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Dda3937_04437 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Dda3937_00466 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Dda3937_00219 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Dda3937_00217 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Dda3937_00701 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Dda3937_01503 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Dda3937_01510 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Dda3937_01500 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Dda3937_01516 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Dda3937_01507 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Dda3937_03948 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Dda3937_03680 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Dda3937_04463 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Dda3937_01498 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Dda3937_01496 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Dda3937_04715 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D Dda3937_03820 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Dda3937_02354 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Dda3937_03263 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Dda3937_01501 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Dda3937_01509 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Dda3937_03301 ykgM; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D Dda3937_04717 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D Dda3937_04201 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Dda3937_03264 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Dda3937_04716 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D Dda3937_03681 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Dda3937_03302 ykgO; rpmJ (L36)-like protein K02919 RP-L36; large subunit ribosomal protein L36
D Dda3937_04714 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Dda3937_04660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04663 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04224 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04665 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04659 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04657 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04656 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04661 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04664 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04666 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04222 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04652 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04223 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04651 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04658 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04662 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04226 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04225 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04654 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04653 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ddd00970]
D Dda3937_04279 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04248 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04251 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04669 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04260 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04234 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04239 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04271 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04272 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04240 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dda3937_04292 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dda3937_04291 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dda3937_04231 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dda3937_04287 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dda3937_04286 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dda3937_04346 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Dda3937_04264 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dda3937_04266 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dda3937_04263 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dda3937_04667 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04671 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04672 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04668 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04284 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04237 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04238 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04252 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04229 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04259 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04233 tRNA-His K14226 tRNA-His; tRNA His
D Dda3937_04247 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dda3937_04670 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dda3937_04250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dda3937_04254 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04246 leuX; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04262 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04258 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04257 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04256 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04268 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04278 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04674 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04673 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04285 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04261 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04265 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04281 tRNA-Ile K14230 tRNA-Met; tRNA Met
D Dda3937_04241 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04242 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04255 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04267 pheU; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dda3937_04273 pheV; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dda3937_04245 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dda3937_04253 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dda3937_04236 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dda3937_04269 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04282 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04249 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04274 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04289 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04243 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04227 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04244 thrW; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04232 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Dda3937_04228 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dda3937_04288 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dda3937_04275 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04277 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04276 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04283 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04290 valV; tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_03502 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dda3937_01562 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dda3937_03152 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dda3937_01616 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dda3937_03662 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dda3937_01011 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Dda3937_01010 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Dda3937_03683 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dda3937_00132 serS; seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dda3937_01678 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dda3937_03935 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dda3937_01522 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Dda3937_01296 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dda3937_02477 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dda3937_01396 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dda3937_02292 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dda3937_01606 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dda3937_03912 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dda3937_03706 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dda3937_03679 pheS; phenylalanine tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dda3937_03678 pheT; phenylalanine tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dda3937_00065 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dda3937_04188 trpS; tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ddd03060]
D Dda3937_01511 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D Dda3937_00215 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D Dda3937_02344 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D Dda3937_01950 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D Dda3937_01951 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D Dda3937_01949 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D Dda3937_01063 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dda3937_02235 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dda3937_02047 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D Dda3937_02234 secM; regulator of secA translation K13301 secM; secretion monitor
D Dda3937_03944 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dda3937_04690 ffs; 4.5S RNA K01983 ffs; SRP RNA
D Dda3937_02012 ftsY; signal recognition particle (SRP) receptor K03110 ftsY; fused signal recognition particle receptor
D Dda3937_02065 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D Dda3937_02066 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Dda3937_02067 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D Dda3937_02490 tatE; Twin-arginine translocation protein TatE K03425 tatE; sec-independent protein translocase protein TatE
D Dda3937_03849 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dda3937_01395 lspA; prolipoprotein signal peptidase (signal peptidase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ddd04122]
D Dda3937_02172 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_04379 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_03699 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dda3937_02007 sirA; sulfur transfer protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Dda3937_00521 yheL; subunit of the heterohexameric YheLMN (TusBCD) mediator of sulfur relay K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Dda3937_00522 yheM; subunit of the heterohexameric YheLMN (TusBCD) mediator of sulfur relay K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Dda3937_00523 yheN; tRNA 2-thiouridine synthesizing protein, subunit of sulfur transfer complex, TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Dda3937_01699 yccK; sulfur transfer protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Dda3937_02085 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Dda3937_03765 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Dda3937_03761 moaA; molybdopterin biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Dda3937_03764 moaD; molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D Dda3937_03739 moeB; molybdopterin synthase sulfurylase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Dda3937_03763 moaC; molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Dda3937_00388 mog; putative molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Dda3937_03762 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Dda3937_01963 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Dda3937_00232 thiS; thiamin biosynthesis protein, sulfur donor K03154 thiS; sulfur carrier protein
D Dda3937_00233 thiF; thiamin (thiazole moiety) biosynthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ddd03018]
D Dda3937_03387 nudH; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Dda3937_00056 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Dda3937_00265 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D Dda3937_00198 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dda3937_02337 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dda3937_04013 rhlE; Putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dda3937_02609 rnr; exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dda3937_02335 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Dda3937_00308 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dda3937_00267 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_00385 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dda3937_02721 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dda3937_00434 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Dda3937_01691 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dda3937_00513 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ddd03030]
D Dda3937_03567 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D Dda3937_03975 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dda3937_01891 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dda3937_03291 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dda3937_02250 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dda3937_02479 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dda3937_02318 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D Dda3937_01297 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Dda3937_01059 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dda3937_03445 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Dda3937_03533 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Dda3937_03468 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Dda3937_03974 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dda3937_01890 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Dda3937_01112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dda3937_01130 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_00179 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ddd03410]
D Dda3937_00589 nth; DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dda3937_03839 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Dda3937_03399 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Dda3937_03265 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Dda3937_01541 nei; Endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D Dda3937_01441 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dda3937_02177 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dda3937_01013 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Dda3937_04048 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dda3937_03621 nfo; endonuclease IV with intrinsic 3'-5' exonuclease activity K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Dda3937_01112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dda3937_02294 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dda3937_01130 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_00179 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ddd03420]
D Dda3937_03640 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Dda3937_03467 uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
D Dda3937_03753 uvrB; excinulease of nucleotide excision repair, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D Dda3937_03959 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Dda3937_00301 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dda3937_01112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dda3937_01130 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_00179 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ddd03430]
D Dda3937_01899 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D Dda3937_00436 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D Dda3937_03389 mutH; methyl-directed mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D Dda3937_00301 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dda3937_03731 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D Dda3937_03713 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Dda3937_01962 xseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Dda3937_02294 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dda3937_03468 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Dda3937_01891 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dda3937_01059 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dda3937_03291 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dda3937_02479 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dda3937_02250 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dda3937_03975 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dda3937_03567 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D Dda3937_01297 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Dda3937_02318 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D Dda3937_01130 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_00179 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_04185 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ddd03440]
D Dda3937_02294 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dda3937_03468 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Dda3937_01058 recF; gap repair protein K03629 recF; DNA replication and repair protein RecF
D Dda3937_03852 recO; gap repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D Dda3937_03289 recR; gap repair protein K06187 recR; recombination protein RecR
D Dda3937_03154 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D Dda3937_01112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dda3937_01621 ruvA; component of RuvABC resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
D Dda3937_01622 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Dda3937_01619 ruvC; component of RuvABC resolvasome, endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Dda3937_01125 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dda3937_02948 recB; exonuclease V (RecBCD complex), beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Dda3937_02947 recC; exonuclease V (RecBCD complex), gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Dda3937_02949 recD; exonuclease V (RecBCD complex), alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Dda3937_01891 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dda3937_01059 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dda3937_03291 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dda3937_02479 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dda3937_02250 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dda3937_03975 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dda3937_03567 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D Dda3937_01297 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Dda3937_02318 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D Dda3937_03886 priA; Primosome factor n' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Dda3937_02618 priB; primosomal protein N K02686 priB; primosomal replication protein N
D Dda3937_03295 priC; Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ddd03250]
D Dda3937_04190 ppiA; Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ddd02010]
D Dda3937_02639 sbp; sulfate transporter subunit; periplasmic-binding component of ABC superfamily K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Dda3937_03506 cysU; Sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Dda3937_03505 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Dda3937_03504 cysA; sulfate/thiosulfate transporter subunit; ATP-binding component of ABC superfamily K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Dda3937_03086 putative extracellular solute-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Dda3937_03085 ABC transporter, membrane component K15496 wtpB; molybdate/tungstate transport system permease protein
D Dda3937_01845 nasF; Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Dda3937_01846 nasE; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D Dda3937_01847 nasD; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Dda3937_03511 ssuA; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03017 atsR; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03002 atsR; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_04315 Taurine transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03509 ssuC; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03021 astB; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03003 atsB; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_04123 Taurine transport system permease protein tauC K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03508 ssuB; Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_03004 astC; Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_04124 Taurine transport ATP-binding protein tauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_04002 modA; molybdate transporter subunit; periplasmic-binding component of ABC superfamily K02020 modA; molybdate transport system substrate-binding protein
D Dda3937_04003 modB; molybdate transporter subunit; membrane component of ABC superfamily K02018 modB; molybdate transport system permease protein
D Dda3937_04004 modC; molybdate transporter subunit; ATP-binding component of ABC superfamily K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Dda3937_03999 modF; ATP-binding component of molybdate ABC transporter K05776 modF; molybdate transport system ATP-binding protein
D Dda3937_03766 sfuA; Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D Dda3937_03767 sfuB; Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D Dda3937_04384 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D Dda3937_03768 sfuC; Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Dda3937_04068 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Dda3937_01357 tbpA; thiamin transporter subunit; periplasmic-binding component of ABC superfamily K02064 thiB; thiamine transport system substrate-binding protein
D Dda3937_01358 thiP; membrane component of thiamin ABC transporter K02063 thiP; thiamine transport system permease protein
D Dda3937_01359 thiQ; thiamin transporter subunit; ATP-binding component of ABC superfamily K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D Dda3937_03477 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D Dda3937_03474 potI; putrescine transporter subunit: membrane component of ABC superfamily K11074 potI; putrescine transport system permease protein
D Dda3937_03475 potH; putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein
D Dda3937_03476 potG; putrescine transporter subunit: ATP-binding component of ABC superfamily K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Dda3937_00899 proX; glycine betaine transporter subunit; periplasmic-binding component of ABC superfamily K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Dda3937_00900 proW; glycine betaine transporter subunit; membrane component of ABC superfamily K02001 proW; glycine betaine/proline transport system permease protein
D Dda3937_00901 proV; Glycine/Betaine L-Proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Dda3937_03079 Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_01009 malK; Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_02388 ganK; ATP-binding component of transport system for galactan K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_01454 Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_02389 ganE; periplasmic binding protein of galactan transport system K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Dda3937_02390 ganF; galactan ABC transport system, permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dda3937_02391 ganG; galactan ABC transport system, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dda3937_04596 togB; Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component K10192 togB; oligogalacturonide transport system substrate-binding protein
D Dda3937_00207 Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component K10192 togB; oligogalacturonide transport system substrate-binding protein
D Dda3937_03360 togM; oligogalacturonide ABC transporter, permease component K10193 togM; oligogalacturonide transport system permease protein
D Dda3937_04711 togN; oligogalacturonide ABC transporter, permease component K10194 togN; oligogalacturonide transport system permease protein
D Dda3937_04712 togA; oligogalacturonide ABC transporter, ATPase component K10195 togA; oligogalacturonide transport system ATP-binding protein
D Dda3937_01005 Multiple sugar-binding protein precursor K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D Dda3937_03082 N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D Dda3937_01004 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_03078 ABC transporter, membrane spanning protein K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_03077 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_01003 Sugar ABC transporter, sugar permease protein 2 USSDB1D K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_00692 yrbC; predicted ABC-type organic solvent transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D Dda3937_00691 yrbD; predicted ABC-type organic solvent transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Dda3937_00690 yrbE; predicted toluene transporter subunit: membrane component of ABC superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Dda3937_00693 yrbB; predicted protein K07122 mlaB; phospholipid transport system transporter-binding protein
D Dda3937_00689 yrbF; predicted toluene transporter subunit: ATP-binding component of ABC superfamily K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Dda3937_02358 rbsB; periplasmic-binding component of an ABC superfamily D-ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D Dda3937_02357 rbsC; D-ribose transporter subunit; membrane component of ABC superfamily K10440 rbsC; ribose transport system permease protein
D Dda3937_02356 rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Dda3937_02355 rbsD; predicted cytoplasmic sugar-binding protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D Dda3937_00599 araF; periplasmic-binding component of an ABC superfamily L-arabinose transporter K10537 araF; L-arabinose transport system substrate-binding protein
D Dda3937_00601 araH; membrane component of an ABC superfamily L-arabinose transporter K10538 araH; L-arabinose transport system permease protein
D Dda3937_00600 araG; ATP-binding component of an ABC superfamily L-arabinose transporter K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D Dda3937_03167 ytfQ; ABC transporter periplasmic binding protein ytfQ precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Dda3937_03170 yjfF; ABC transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D Dda3937_03169 ytfT; ABC transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D Dda3937_03168 ytfR; Hypothetical ABC transporter ATP-binding protein ytfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Dda3937_02518 mglB; galactose-binding transport protein; receptor for galactose taxis K10540 mglB; methyl-galactoside transport system substrate-binding protein
D Dda3937_02520 mglC; galactoside transport system permease protein K10541 mglC; methyl-galactoside transport system permease protein
D Dda3937_02519 mglA; ATPase of galactose transport system K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D Dda3937_00984 xylF; D-xylose transport protein (XylF) K10543 xylF; D-xylose transport system substrate-binding protein
D Dda3937_00982 xylH; Xylose ABC transporter, permease protein xylH K10544 xylH; D-xylose transport system permease protein
D Dda3937_00983 xylG; D-xylose transport ATP-binding protein xylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Dda3937_01336 periplasmic binding protein of an ABC transporter K17202 eryG; erythritol transport system substrate-binding protein
D Dda3937_01339 membrane component of an ABC transporter K17203 eryF; erythritol transport system permease protein
D Dda3937_01338 ATP-binding component of an ABC transporter K17204 eryE; erythritol transport system ATP-binding protein
D Dda3937_01204 sugar-binding periplasmic protein K17208 ibpA; inositol transport system substrate-binding protein
D Dda3937_01206 sugar ABC transporter, permease protein K17209 iatP; inositol transport system permease protein
D Dda3937_01205 sugar transport ATP-binding protein, ABC transporter K17210 iatA; inositol transport system ATP-binding protein
D Dda3937_01150 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Dda3937_01151 Sugar ABC transporter, permease protein K17238 inoF; inositol-phosphate transport system permease protein
D Dda3937_01152 Sugar ABC transporter, permease protein K17239 inoG; inositol-phosphate transport system permease protein
D Dda3937_01153 Maltose/maltodextrin transport ATP-binding protein MalK K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Dda3937_02029 ugpB; periplasmic binding protein of sn-glycerol 3-phosphate transport system K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Dda3937_02271 ABC transporter, periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Dda3937_04431 ugpA; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_02267 sugar ABC transport system, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_03043 ugpE; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_02268 Inner membrane component of binding-protein-dependent transport system K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_03044 ugpC; glycerol-3-phosphate transporter subunit; ATP-binding component of ABC superfamily K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Dda3937_02270 Probable sugar ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Dda3937_01941 phosphate-binding protein of an ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D Dda3937_01097 pstS; phosphate transporter subunit; periplasmic-binding component of ABC superfamily K02040 pstS; phosphate transport system substrate-binding protein
D Dda3937_01690 pstC; phosphate ABC transporter, permease component K02037 pstC; phosphate transport system permease protein
D Dda3937_01096 pstC; phosphate transporter subunit; membrane component of ABC superfamily K02037 pstC; phosphate transport system permease protein
D Dda3937_01689 pstA; phosphate ABC transporter, permease component K02038 pstA; phosphate transport system permease protein
D Dda3937_01095 pstA; phosphate transporter subunit; membrane component of ABC superfamily K02038 pstA; phosphate transport system permease protein
D Dda3937_01688 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Dda3937_01094 pstB; phosphate transporter subunit; ATP-binding component of ABC superfamily K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Dda3937_04100 phosphonate ABC transporter, periplasmic component PhnD K02044 phnD; phosphonate transport system substrate-binding protein
D Dda3937_04101 phnE; phosphonate ABC transporter, permease component PhnE K02042 phnE; phosphonate transport system permease protein
D Dda3937_04102 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D Dda3937_04099 phnC; ATP-binding component of ABC phosphonate transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Dda3937_01856 Lysine-arginine-ornithine-binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Dda3937_01217 Histidine-binding periplasmic protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Dda3937_04215 hisM; histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily K10015 hisM; histidine transport system permease protein
D Dda3937_00103 hisQ; histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily K10016 hisQ; histidine transport system permease protein
D Dda3937_04214 hisP; histidine/lysine/arginine/ornithine transporter subunit; ATP-binding component of ABC superfamily K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_00102 hisJ; periplasmic-binding component of an ABC superfamily histidine/lysine/arginine/ornithine transporter K10014 hisJ; histidine transport system substrate-binding protein
D Dda3937_02885 glnH; glutamine transporter subunit; periplasmic binding component of ABC superfamily K10036 glnH; glutamine transport system substrate-binding protein
D Dda3937_02886 glnP; glutamine transporter subunit; membrane component of ABC superfamily K10037 glnP; glutamine transport system permease protein
D Dda3937_02887 glnQ; glutamine transporter subunit; ATP-binding component of ABC superfamily K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_04325 artJ; Arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein
D Dda3937_00469 artI; periplasmic-binding component of an ABC superfamily arginine transporter K09997 artI; arginine transport system substrate-binding protein
D Dda3937_00467 artM; arginine transporter subunit; membrane component of ABC superfamily K09998 artM; arginine transport system permease protein
D Dda3937_00468 artQ; arginine transporter subunit; membrane component of ABC superfamily K09999 artQ; arginine transport system permease protein
D Dda3937_02373 artP; arginine transporter subunit; ATP-binding component of ABC superfamily K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_02472 gltI; periplasmic-binding component of an ABC superfamily glutamate/aspartate transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Dda3937_02474 gltK; membrane component of an ABC superfamily glutamate/aspartate transporter K10002 gltK; glutamate/aspartate transport system permease protein
D Dda3937_02473 gltJ; membrane component of an ABC superfamily glutamate and aspartate transporter K10003 gltJ; glutamate/aspartate transport system permease protein
D Dda3937_02475 gltL; ATP-binding component of an ABC superfamily glutamate/aspartate transporter K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_01671 ABC transporter, periplasmic binding-protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D Dda3937_01669 Octopine transport system permease protein occM K10019 occM; octopine/nopaline transport system permease protein
D Dda3937_01670 Octopine transport system permease protein occQ K10020 occQ; octopine/nopaline transport system permease protein
D Dda3937_01668 ATP-binding component of histidine transport K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_01578 yhdW; Amino acid ABC transporter, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Dda3937_01577 yhdX; Putative transport system permease protein K09970 aapQ; general L-amino acid transport system permease protein
D Dda3937_01576 yhdY; membrane component of an ABC superfamily predicted amino-acid transporter K09971 aapM; general L-amino acid transport system permease protein
D Dda3937_01575 yhdZ; Hypothetical amino-acid ABC transporter ATP-binding protein yhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_01581 fliY; cystine transporter subunit; periplasmic-binding component of ABC superfamily K02424 tcyA; L-cystine transport system substrate-binding protein
D Dda3937_01580 yecS; predicted transporter subunit: membrane component of ABC superfamily K10009 tcyB; L-cystine transport system permease protein
D Dda3937_00286 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D Dda3937_00287 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D Dda3937_00288 predicted transporter subunit: ATP-binding component of ABC superfamily K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D Dda3937_02017 livK; high-affinity leucine-specific ABC transport system; periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dda3937_01372 branched-chain amino-acid ABC transporter periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dda3937_02018 livH; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01997 livH; branched-chain amino acid transport system permease protein
D Dda3937_01371 branched-chain amino-acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D Dda3937_02019 livM; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01998 livM; branched-chain amino acid transport system permease protein
D Dda3937_01370 branched-chain amino-acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D Dda3937_02020 livG; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dda3937_01369 branched-chain amino-acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dda3937_02021 livF; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dda3937_01368 branched-chain amino-acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dda3937_03010 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D Dda3937_03491 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D Dda3937_03915 metQ; receptor component of DL-methionine uptake transporter (MUT) K02073 metQ; D-methionine transport system substrate-binding protein
D Dda3937_03008 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D Dda3937_03489 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D Dda3937_03916 metI; membrane component of DL-methionine uptake transporter (MUT) K02072 metI; D-methionine transport system permease protein
D Dda3937_03490 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D Dda3937_03009 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D Dda3937_03917 metN; ATP-binding component of DL-methionine uptake transporter (MUT) K02071 metN; D-methionine transport system ATP-binding protein
D Dda3937_04054 oppA; oligopeptide transport; periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_03136 mppA; ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04040 ABC transporter, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04053 oppB; oligopeptide transporter subunit; membrane component of ABC superfamily K15581 oppB; oligopeptide transport system permease protein
D Dda3937_04052 oppC; oligopeptide transport system permease OppC K15582 oppC; oligopeptide transport system permease protein
D Dda3937_04051 oppD; oligopeptide transporter subunit; ATP-binding component of ABC superfamily K15583 oppD; oligopeptide transport system ATP-binding protein
D Dda3937_04050 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Dda3937_02540 dppA; dipeptide ABC transporter, periplasmic component K12368 dppA; dipeptide transport system substrate-binding protein
D Dda3937_02905 dipeptide binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D Dda3937_02541 dppB; dipeptide transporter; membrane component of ABC superfamily K12369 dppB; dipeptide transport system permease protein
D Dda3937_02542 dppC; dipeptide transporter; membrane component of ABC superfamily K12370 dppC; dipeptide transport system permease protein
D Dda3937_02543 dppD; dipeptide transporter; ATP-binding component of ABC superfamily K12371 dppD; dipeptide transport system ATP-binding protein
D Dda3937_01979 dppF; dipeptide transporter; ATP-binding component of ABC superfamily K12372 dppF; dipeptide transport system ATP-binding protein
D Dda3937_03113 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D Dda3937_03112 sapB; predicted antimicrobial peptide transporter subunit; membrane component of ABC superfamily K19227 sapB; cationic peptide transport system permease protein
D Dda3937_03111 sapC; predicted antimicrobial peptide transporter subunit; membrane component of ABC superfamily K19228 sapC; cationic peptide transport system permease protein
D Dda3937_03110 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D Dda3937_03109 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D Dda3937_00762 periplasmic binding protein for nickel K15584 nikA; nickel transport system substrate-binding protein
D Dda3937_00761 Nickel transport system permease protein K15585 nikB; nickel transport system permease protein
D Dda3937_00760 nickel ABC transporter, inner membrane component K15586 nikC; nickel transport system permease protein
D Dda3937_00759 Oligopeptide transporter putative ATPase domain protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Dda3937_00758 ATP-binding protein of nickel transport system K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Dda3937_03251 yliB; ABC transporter, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein
D Dda3937_03250 yliC; Dipeptide transport system permease protein K13890 gsiC; glutathione transport system permease protein
D Dda3937_03249 yliD; ABC transporter, permease component K13891 gsiD; glutathione transport system permease protein
D Dda3937_03252 ABC transporter K13892 gsiA; glutathione transport system ATP-binding protein
D Dda3937_03828 yejA; predicted oligopeptide transporter subunit; periplasmic-binding component of ABC superfamily K13893 yejA; microcin C transport system substrate-binding protein
D Dda3937_03827 yejB; predicted oligopeptide transporter subunit; membrane component of ABC superfamily K13894 yejB; microcin C transport system permease protein
D Dda3937_03826 yejE; predicted oligopeptide transporter subunit; membrane component of ABC superfamily K13895 yejE; microcin C transport system permease protein
D Dda3937_03825 yejF; Putative ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D Dda3937_03032 cbuB; ferric chrysobactin binding protein;permease periplasmic component K23185 fepB; ferric enterobactin transport system substrate-binding protein
D Dda3937_03034 cbuD; ferrichrysobactin transporter; ABC permease; inner membrane component K23186 fepD; iron-siderophore transport system permease protein
D Dda3937_03035 cbuG; ferrichrysobactin transporter: ABC permease; inner membrane component K23187 fepG; iron-siderophore transport system permease protein
D Dda3937_03036 cbuC; ferrichrysobactin transporter, permease; ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D Dda3937_00505 fhuD; iron-hydroxamate transporter subunit; periplasmic-binding component of ABC superfamily K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D Dda3937_00504 fhuB; fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components K23228 fhuB; ferric hydroxamate transport system permease protein
D Dda3937_00506 fhuC; ATP-binding component of iron-hydroxamate transporter K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D Dda3937_00499 btuF; periplasmic binding component of cobalamin (vitamin B-12) transporter K06858 btuF; vitamin B12 transport system substrate-binding protein
D Dda3937_04344 btuC; vitamin B12 transporter subunit: membrane component of ABC superfamily K06073 btuC; vitamin B12 transport system permease protein
D Dda3937_03648 btuD; vitamin B12 transporter subunit : ATP-binding component of ABC superfamily K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D Dda3937_01625 znuA; Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D Dda3937_01623 znuB; high-affinity zinc transport system membrane protein K09816 znuB; zinc transport system permease protein
D Dda3937_01624 znuC; high-affinity zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Dda3937_00376 yfeA; Manganese ABC transporter, periplasmic-binding protein SitA K11604 sitA; manganese/iron transport system substrate-binding protein
D Dda3937_00374 yfeC; Manganese ABC transporter, inner membrane permease protein SitC K11605 sitC; manganese/iron transport system permease protein
D Dda3937_00373 yfeD; Manganese ABC transporter, inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D Dda3937_00375 yfeB; Manganese ABC transporter, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein
D Dda3937_00445 O-antigen export system permease protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D Dda3937_00446 O-antigen export system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Dda3937_03643 lolE; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D Dda3937_03641 lolC; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D Dda3937_03642 lolD; outer membrane-specific lipoprotein transporter subunit; ATP-binding component of ABC superfamily K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Dda3937_01299 yjgP; conserved inner membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D Dda3937_01300 yjgQ; conserved inner membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D Dda3937_00683 yhbG; ATP-binding component of an ABC-type LPS transporter complex K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dda3937_02014 ftsX; predicted transporter subunit: membrane component of ABC superfamily K09811 ftsX; cell division transport system permease protein
D Dda3937_02013 ftsE; predicted transporter subunit: ATP-binding component of ABC superfamily K09812 ftsE; cell division transport system ATP-binding protein
D Dda3937_03205 msbA; lipid transporter subunit of ABC superfamily; membrane component K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Dda3937_03311 mdlA; predicted ATP-binding component of multidrug ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dda3937_03310 mdlB; predicted ATP-binding component of multidrug ABC transporter K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dda3937_03386 Toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Dda3937_01651 prtD; Alkaline protease secretion ATP-binding protein aprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Dda3937_04326 cydC; membrane and ATP-binding components of an ABC superfamily cysteine transporter K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Dda3937_03630 cydD; cysteine transporter subunit of ABC superfamily K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D Dda3937_01419 macB; Putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D Dda3937_01930 yojI; Putative ATP-binding component of a transport system K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D Dda3937_01406 yddA; Hypothetical ABC transporter ATP-binding protein yddA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ddd02060]
D Dda3937_01426 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Dda3937_01427 ptsH; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) K02784 ptsH; phosphocarrier protein HPr
D Dda3937_01425 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Dda3937_02252 ptsG; PTS system glucose-specific IICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D Dda3937_03952 nagE; PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Dda3937_01267 scrA; PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Dda3937_03833 arbF; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D Dda3937_02589 bglF; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D Dda3937_00995 mtlA; PTS system, mannitol-specific IIC component / PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D Dda3937_02579 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02404 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02582 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02580 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D Dda3937_03725 manX; PTS system mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Dda3937_03726 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D Dda3937_04593 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D Dda3937_01633 sgaT; Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D Dda3937_03625 fruB; IIA and HPr components of fructose-specific PTS enzyme K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D Dda3937_03623 fruA; PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Dda3937_03624 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Dda3937_00849 ptsP; PTS system nitrogen assimilation enzyme I component/putative sensory transducer K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Dda3937_00678 npr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K08485 ptsO; phosphocarrier protein NPr
D Dda3937_00680 ptsN; sugar-specific enzyme IIA component of PTS K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ddd03070]
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_04208 hrcC; Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) K03219 yscC; type III secretion protein C
D Dda3937_00608 hrpJ; type III secretion protein K04058 yscW; type III secretion protein W
D Dda3937_03342 hrcJ; Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D Dda3937_00615 hrcR; type III secretion inner membrane protein K03226 yscR; type III secretion protein R
D Dda3937_00616 hrcS; type III secretion inner membrane protein K03227 yscS; type III secretion protein S
D Dda3937_00617 hrcT; type III secretion inner membrane protein K03228 yscT; type III secretion protein T
D Dda3937_00618 hrcU; type III secretion inner membrane protein K03229 yscU; type III secretion protein U
D Dda3937_00609 hrcV; Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) K03230 yscV; type III secretion protein V
D Dda3937_00611 hrcN; type III secretory pathway, ATPase component HrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D Dda3937_00614 hrcQ; HrcQ K03225 yscQ; type III secretion protein Q
D Dda3937_03340 hrpE; HrpE K03223 yscL; type III secretion protein L
D Dda3937_03838 sttD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Dda3937_02415 outD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Dda3937_02411 outS; OutS lipoprotein precursor K02465 gspS; general secretion pathway protein S
D Dda3937_02414 outC; General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D Dda3937_04115 sttF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Dda3937_02417 outF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Dda3937_04114 sttG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Dda3937_02418 outG; Type II secretory pathway, component OutG K02456 gspG; general secretion pathway protein G
D Dda3937_02419 outH; Type II secretory pathway, component OutH K02457 gspH; general secretion pathway protein H
D Dda3937_04113 sttI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D Dda3937_02420 outI; Type II secretory pathway, component OutI K02458 gspI; general secretion pathway protein I
D Dda3937_04112 sttJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D Dda3937_02421 outJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D Dda3937_04111 sttK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Dda3937_02422 outK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Dda3937_02423 outL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D Dda3937_02424 outM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D Dda3937_04615 sttE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Dda3937_02416 outE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Dda3937_02425 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D Dda3937_01950 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D Dda3937_01951 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D Dda3937_00215 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D Dda3937_02344 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D Dda3937_01511 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D Dda3937_01949 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D Dda3937_01063 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dda3937_02235 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dda3937_02234 secM; regulator of secA translation K13301 secM; secretion monitor
D Dda3937_02012 ftsY; signal recognition particle (SRP) receptor K03110 ftsY; fused signal recognition particle receptor
D Dda3937_02047 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D Dda3937_03944 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dda3937_02065 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D Dda3937_02066 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Dda3937_02067 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D Dda3937_02490 tatE; Twin-arginine translocation protein TatE K03425 tatE; sec-independent protein translocase protein TatE
D Dda3937_02755 virB1; VirB1 K03194 virB1; type IV secretion system protein VirB1
D Dda3937_02754 virB2; Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
D Dda3937_02752 virB5; Minor pilin of type IV secretion complex (VirB5) K03200 virB5; type IV secretion system protein VirB5
D Dda3937_02747 virB9; VirB9 K03204 virB9; type IV secretion system protein VirB9
D Dda3937_02750 virB6; Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
D Dda3937_02748 virB8; Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D Dda3937_02746 virB10; Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D Dda3937_02753 virB4; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D Dda3937_02745 virB11; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D Dda3937_01736 TRAG protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Dda3937_00832 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Dda3937_01760 Putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D Dda3937_02771 Putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D Dda3937_00833 hcpB; Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D Dda3937_01761 hcpA; Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D Dda3937_02770 Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D Dda3937_00811 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D Dda3937_00804 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D Dda3937_00809 Chemotaxis motB protein K11892 impK; type VI secretion system protein ImpK
D Dda3937_00808 ClpB protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ddd02020]
D Dda3937_01940 phoR; sensory histidine kinase in two-component regulatory system with PhoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dda3937_01939 phoB; DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Dda3937_03870 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dda3937_01941 phosphate-binding protein of an ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D Dda3937_01097 pstS; phosphate transporter subunit; periplasmic-binding component of ABC superfamily K02040 pstS; phosphate transport system substrate-binding protein
D Dda3937_02089 phoQ; sensory histidine kinase in two-compoent regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Dda3937_02088 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Dda3937_00355 envZ; sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Dda3937_00354 ompR; DNA-binding response regulator in two-component regulatory system with EnvZ K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Dda3937_03661 ompF; outer membrane porin 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D Dda3937_03660 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_03657 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_03052 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D Dda3937_03053 cpxR; Transcriptional regulatory protein cpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D Dda3937_02735 yqjB; Putative membrane protein precursor K25864 mzrA; modulator protein MzrA
D Dda3937_00122 rstB; Sensor protein rstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D Dda3937_00121 rstA; DNA-binding response regulator in two-component regulatory system with RstB K07661 rstA; two-component system, OmpR family, response regulator RstA
D Dda3937_00496 degP; serine endoprotease (protease Do), membrane-associated K04771 degP; serine protease Do [EC:3.4.21.107]
D Dda3937_02817 baeS; sensory histidine kinase in two-component regulatory system with BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Dda3937_02816 baeR; DNA-binding response regulator in two-component regulatory system with BaeS K07664 baeR; two-component system, OmpR family, response regulator BaeR
D Dda3937_02821 mdtA; multidrug efflux system, subunit A K07799 mdtA; membrane fusion protein, multidrug efflux system
D Dda3937_02820 yegN; Acriflavin resistance plasma membrane protein K07788 mdtB; multidrug efflux pump
D Dda3937_02819 mdtC; multidrug efflux system, subunit C K07789 mdtC; multidrug efflux pump
D Dda3937_02818 yegB; Putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D Dda3937_00527 pmrB; sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D Dda3937_00526 pmrA; Response regulator of the two-component transcriptional regulatory system (PmrA-PmrB BasR-BasS) K07771 basR; two-component system, OmpR family, response regulator BasR
D Dda3937_01080 arnB; UDP-4-amino-4-deoxy-L-arabinose alpha-ketoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D Dda3937_00229 Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_02279 Sensor protein irlS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_00228 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dda3937_02280 Two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dda3937_03993 Probable Co/Zn/Cd efflux system membrane fusion protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Dda3937_03991 cusB; Probable Co/Zn/Cd efflux system membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D Dda3937_03990 cusA; Cobalt-zinc-cadmium resistance protein czcA; Cation efflux system protein cusA K07787 cusA; copper/silver efflux system protein
D Dda3937_02785 flhD; Flagellar transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD
D Dda3937_02784 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC
D Dda3937_03427 fliC; flagellar filament structural protein (flagellin) K02406 fliC; flagellin
D Dda3937_03418 fliA; RNA polymerase, sigma 28 (sigma F) factor K02405 fliA; RNA polymerase sigma factor FliA
D Dda3937_02783 motA; Flagellar motor rotation protein motA K02556 motA; chemotaxis protein MotA
D Dda3937_01552 kdpD; sensory histidine kinase in two-component regulatory system with KdpE K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dda3937_01553 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Dda3937_01549 kdpA; P-type ATPase, high-affinity potassium transport system, A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Dda3937_01550 kdpB; high-affinity potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Dda3937_01551 kdpC; potassium translocating ATPase, subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Dda3937_00396 arcA; DNA-binding response regulator in two-component regulatory system with ArcB or CpxA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D Dda3937_02109 tctE; Sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D Dda3937_02110 tctD; Transcriptional regulatory protein tctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D Dda3937_02113 Tricarboxylate transport membrane protein tctA K07793 tctA; putative tricarboxylic transport membrane protein
D Dda3937_02112 transport of tricarboxylates K07794 tctB; putative tricarboxylic transport membrane protein
D Dda3937_02111 transport of tricarboxylates K07795 tctC; putative tricarboxylic transport membrane protein
D Dda3937_01060 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D Dda3937_03194 D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03212 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03211 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03195 D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D Dda3937_03193 D-alanine carrier protein DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Dda3937_00956 Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D Dda3937_04300 fepA; TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins K19611 fepA; ferric enterobactin receptor
D Dda3937_02968 citA; sensory histidine kinase in two-component regulatory system with citB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D Dda3937_02969 citB; Response regulator of a two component transcriptional regulatory system (CitA/CitB) K07702 dpiA; two-component system, CitB family, response regulator CitB
D Dda3937_04525 citC_2; citrate lyase synthetase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D Dda3937_04561 citC_1; citrate lyase synthetase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D Dda3937_04526 citD_2; citrate lyase, acyl carrier (gamma) subunit K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D Dda3937_04562 citD_1; citrate lyase, acyl carrier (gamma) subunit K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D Dda3937_04527 citE_2; citrate lyase, citryl-ACP lyase (beta) subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Dda3937_04563 citE_1; citrate lyase, citryl-ACP lyase (beta) subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Dda3937_04528 citF_2; citrate lyase, citrate-ACP transferase (alpha) subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D Dda3937_00476 citF_1; Citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D Dda3937_04564 citX; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D Dda3937_00043 citG; triphosphoribosyl-dephospho-CoA transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Dda3937_02537 dcuS; Fumarate respiration sensor kinase protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D Dda3937_02538 dcuR; Response regulator of the two component transcriptional regulatory system DcuR/DcuS K07703 dcuR; two-component system, CitB family, response regulator DcuR
D Dda3937_02689 dcuB; C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D Dda3937_03741 sfcA; malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Dda3937_02539 maeN; Malate Na(+) symporter K11616 maeN; malate:Na+ symporter
D Dda3937_03787 narX; sensory histidine kinase in two-component regulatory system with NarL K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Dda3937_03786 narL; DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dda3937_03791 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03792 narH; nitrate reductase 1, beta (Fe-S) subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03794 narI; nitrate reductase 1, gamma (cytochrome b(NR)) subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03793 narJ; molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Dda3937_02963 fdnG; formate dehydrogenase-N, alpha subunit, nitrate-inducible K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D Dda3937_02962 fdnH; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible K08349 fdnH; formate dehydrogenase-N, beta subunit
D Dda3937_02961 fdnI; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible K08350 fdnI; formate dehydrogenase-N, gamma subunit
D Dda3937_02147 frdA; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dda3937_02146 frdB; fumarate reductase (anaerobic), Fe-S subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dda3937_02145 frdC; fumarate reductase (anaerobic), membrane anchor subunit K00246 frdC; succinate dehydrogenase subunit C
D Dda3937_02144 frdD; fumarate reductase (anaerobic), membrane anchor subunit K00247 frdD; succinate dehydrogenase subunit D
D Dda3937_03548 uhpC; membrane protein regulates uhpT expression K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D Dda3937_03549 uhpB; Sensor protein uhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Dda3937_03550 uhpA; DNA-binding response regulator in two-component regulatory system wtih UhpB K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D Dda3937_03547 uhpT; Hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D Dda3937_03914 rcsF; predicted outer membrane protein, signal K06080 rcsF; RcsF protein
D Dda3937_01775 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Dda3937_01777 yojN; Putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D Dda3937_01776 rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and YojN K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Dda3937_00193 barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Dda3937_03960 uvrY; Response regulator of the two-component transcriptional regulatory system UvrY-BarA (ExpA-ExpS, GacA-GacS) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dda3937_00840 Transcriptional regulator ahyR/asaR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D Dda3937_03151 csrA; post transcriptional regulatory RNA-binding protein K03563 csrA; carbon storage regulator
D Dda3937_00877 glnD; uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Dda3937_03375 glnB; regulatory protein P-II for glutamine synthetase K04751 glnB; nitrogen regulatory protein P-II 1
D Dda3937_01117 glnL; sensory histidine kinase in two-component regulatory system with GlnG K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Dda3937_01116 glnG; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Dda3937_01118 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dda3937_02180 nifA; Mo/Fe-nitrogenase-specific transcriptional regulator NifA K02584 nifA; Nif-specific regulatory protein
D Dda3937_01995 dctA; C4-dicarboxylic acid, orotate and citrate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Dda3937_00682 rpoN; RNA polymerase, sigma 54 (sigma N) factor K03092 rpoN; RNA polymerase sigma-54 factor
D Dda3937_03378 yfhK; Sensor histidine kinase for the two component response regulator YfhA K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Dda3937_03376 yfhA; predicted DNA-binding response regulator in two-component system K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Dda3937_04675 tke1; glmS activator sRNA K15841 glmY; small regulatory RNA GlmY
D Dda3937_01813 hybO; hydrogenase 2, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Dda3937_01816 hybC; hydrogenase 2, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Dda3937_02778 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dda3937_01934 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03899 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01559 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00072 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03501 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03500 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03499 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03498 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01162 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02023 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02025 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02026 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02027 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02872 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02184 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00027 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03462 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01861 Probable methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02635 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02614 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00563 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02779 cheD; Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00105 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_01293 Methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02163 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00170 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02606 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00625 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_00626 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_03778 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_00992 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_01632 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_02970 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_03142 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_02665 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_02787 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_00404 chmX; Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_00107 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D Dda3937_00184 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D Dda3937_02780 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Dda3937_02781 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Dda3937_02776 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Dda3937_02777 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dda3937_02985 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Dda3937_02475 gltL; ATP-binding component of an ABC superfamily glutamate/aspartate transporter K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_02474 gltK; membrane component of an ABC superfamily glutamate/aspartate transporter K10002 gltK; glutamate/aspartate transport system permease protein
D Dda3937_02473 gltJ; membrane component of an ABC superfamily glutamate and aspartate transporter K10003 gltJ; glutamate/aspartate transport system permease protein
D Dda3937_02472 gltI; periplasmic-binding component of an ABC superfamily glutamate/aspartate transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Dda3937_00546 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dda3937_03757 putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dda3937_01531 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dda3937_03758 putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dda3937_01883 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dda3937_01882 ybgT; Putative outer membrane lipoprotein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_03929 wza; Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Dda3937_03928 wzb; Low molecular weight protein-tyrosine-phosphatase wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Dda3937_03927 wzc; Tyrosine-protein kinase wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dda3937_00270 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dda3937_00271 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Dda3937_03435 pemB; Possible pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Dda3937_03374 pemA; Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Dda3937_02793 cel5Z; endo-1,4-beta-glucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dda3937_01165 heme uptake regulator K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dda3937_01166 Fe2+-dicitrate sensor, membrane component K07165 fecR; transmembrane sensor
D Dda3937_02202 flgM; Negative regulator of flagellin synthesis flgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Dda3937_03405 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ddd02024]
D Dda3937_03941 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Dda3937_00434 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Dda3937_00577 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dda3937_00576 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Dda3937_03488 rhlA; (R)-3-hydroxydecanoyl-ACP:CoA transacylase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D Dda3937_01863 Rhamnosyltransferase I, subunit B K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D Dda3937_03920 dTDP-rhamnosyl transferase rfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Dda3937_03987 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dda3937_03522 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dda3937_01566 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dda3937_03378 yfhK; Sensor histidine kinase for the two component response regulator YfhA K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Dda3937_03376 yfhA; predicted DNA-binding response regulator in two-component system K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Dda3937_02785 flhD; Flagellar transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD
D Dda3937_02784 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC
D Dda3937_01553 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Dda3937_00840 Transcriptional regulator ahyR/asaR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D Dda3937_01738 Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D Dda3937_01739 Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D Dda3937_01740 Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D Dda3937_01741 Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D Dda3937_01742 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D Dda3937_01743 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D Dda3937_01744 Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D Dda3937_01745 Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D Dda3937_03593 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D Dda3937_01746 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D Dda3937_04080 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Dda3937_00641 ABC transpoter ATP binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Dda3937_01640 Possible ABC transporter, periplasmic substrate X binding protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Dda3937_00639 ABC transporter membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Dda3937_01639 Putative ABC transporter of substrate X, permease subunit II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Dda3937_04077 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Dda3937_00640 ABC transporter permease membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Dda3937_01638 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Dda3937_04078 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Dda3937_04148 ydcT; ABC transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Dda3937_04076 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Dda3937_01637 Putative ABC transporter of substrate X, ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Dda3937_02017 livK; high-affinity leucine-specific ABC transport system; periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dda3937_01372 branched-chain amino-acid ABC transporter periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dda3937_02018 livH; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01997 livH; branched-chain amino acid transport system permease protein
D Dda3937_01371 branched-chain amino-acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D Dda3937_02019 livM; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01998 livM; branched-chain amino acid transport system permease protein
D Dda3937_01370 branched-chain amino-acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D Dda3937_02020 livG; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dda3937_01369 branched-chain amino-acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dda3937_02021 livF; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dda3937_01368 branched-chain amino-acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dda3937_03219 expI; Homoserine lactone synthase YpeI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Dda3937_03218 expR; DNA-binding transcriptional regulatory protein ExpR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D Dda3937_03371 pelE; pectate lyase pelE K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_04193 pelB; pectate lyase B K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_03370 pelA; pectate lyase, Pla K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_03372 pelD; pectate lyase D K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_04192 pelC; pectate lyase C K01728 pel; pectate lyase [EC:4.2.2.2]
D Dda3937_02453 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dda3937_00546 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dda3937_02727 zur; Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Dda3937_02137 Mannan endo-1,4-beta-mannosidase precursor K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Dda3937_00140 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Dda3937_04041 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Dda3937_01104 High-affnity carbon uptake protein Hat/HatR K20332 toxC; toxoflavin biosynthesis protein ToxC
D Dda3937_01105 serine/threonine kinase K20333 toxD; toxoflavin biosynthesis protein ToxD
D Dda3937_01955 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Dda3937_01841 Probable outer membrane multidrug efflux lipoprotein, OMF family precursor K18139 oprM; outer membrane protein, multidrug efflux system
D Dda3937_04054 oppA; oligopeptide transport; periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_03136 mppA; ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04040 ABC transporter, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04053 oppB; oligopeptide transporter subunit; membrane component of ABC superfamily K15581 oppB; oligopeptide transport system permease protein
D Dda3937_04052 oppC; oligopeptide transport system permease OppC K15582 oppC; oligopeptide transport system permease protein
D Dda3937_04051 oppD; oligopeptide transporter subunit; ATP-binding component of ABC superfamily K15583 oppD; oligopeptide transport system ATP-binding protein
D Dda3937_04050 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Dda3937_03326 putative solute-binding lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_02915 opine transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03438 oligopeptide transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_02998 Probable periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_00835 yddS; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_00111 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03607 ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_01275 ABC transporter, periplasmic binding-protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03671 ABC-type transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_01346 periplasmic binding protein of an ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03184 ABC transport protein, solute binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_01019 ABC-type transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03239 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03439 oligopeptide transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_02994 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_02912 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_00839 ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_00115 Putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03608 D-ala-D-ala transporter subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_01276 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03672 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_01347 permease of an ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03185 ABC transport protein inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_01020 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03240 Dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03325 putative transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_02993 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_02911 opine transporter, membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_00838 ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_00114 Dipeptide transport system permease protein dppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03609 yddQ; dipeptide transport protein (ABC superfamily, membrane) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01277 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03673 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01348 permease of an ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03186 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01021 Membrane component, ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03241 Dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01248 Oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01022 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01349 ATP-binding protein of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01247 ABC transporter, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_02992 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01278 Peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03328 ABC transporter, nucleotide binding/ATPase protein (peptide) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01163 peptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_00837 Oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03187 Peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_00113 Dipeptide transport ATP-binding protein dppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03674 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_02914 opine transporter, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03242 Oligopeptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01246 oligopeptide ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_01164 peptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_03327 ABC transporter, nucleotide binding/ATPase protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_00836 Peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_02913 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_01350 ATP-binding protein of ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_00112 Putative glutathione transporter, ATP-binding component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_03243 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_01063 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dda3937_00215 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D Dda3937_02344 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D Dda3937_01511 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D Dda3937_01949 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D Dda3937_02235 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dda3937_02012 ftsY; signal recognition particle (SRP) receptor K03110 ftsY; fused signal recognition particle receptor
D Dda3937_02047 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D Dda3937_03944 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dda3937_02289 Phospholipase C 4 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ddd02030]
D Dda3937_01934 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03899 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01559 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00072 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03501 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03500 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03499 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03498 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01162 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02023 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02025 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02026 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02027 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02872 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02184 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00027 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03462 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01861 Probable methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02635 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02614 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00563 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02779 cheD; Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00105 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_01293 Methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02163 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00170 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02606 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00625 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_00626 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_03778 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_00992 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_01632 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_02970 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_03142 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_02665 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_02787 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_00404 chmX; Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_00107 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D Dda3937_00184 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D Dda3937_02358 rbsB; periplasmic-binding component of an ABC superfamily D-ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D Dda3937_02518 mglB; galactose-binding transport protein; receptor for galactose taxis K10540 mglB; methyl-galactoside transport system substrate-binding protein
D Dda3937_02540 dppA; dipeptide ABC transporter, periplasmic component K12368 dppA; dipeptide transport system substrate-binding protein
D Dda3937_02905 dipeptide binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D Dda3937_02781 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Dda3937_02780 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Dda3937_02776 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Dda3937_02775 cheZ; Chemotaxis response - phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D Dda3937_02777 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dda3937_02985 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Dda3937_02778 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dda3937_02225 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D Dda3937_02219 fliM; Flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D Dda3937_02218 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN
D Dda3937_02783 motA; Flagellar motor rotation protein motA K02556 motA; chemotaxis protein MotA
D Dda3937_02782 motB; Flagellar motor rotation protein motB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ddd02040]
D Dda3937_02227 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Dda3937_02226 fliF; Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D Dda3937_02225 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D Dda3937_02224 fliH; Flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH
D Dda3937_02223 fliI; Flagellum-specific ATP synthase fliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Dda3937_02222 fliJ; Flagellar protein fliJ K02413 fliJ; flagellar protein FliJ
D Dda3937_02221 fliK; Flagellar hook-length control protein fliK K02414 fliK; flagellar hook-length control protein FliK
D Dda3937_02220 fliL; Flagellar biosynthesis protein fliL K02415 fliL; flagellar protein FliL
D Dda3937_02219 fliM; Flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D Dda3937_02218 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN
D Dda3937_02217 fliO; Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D Dda3937_02216 fliP; Flagellar biosynthesis protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D Dda3937_02215 fliQ; Flagellar biosynthesis protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Dda3937_02214 fliR; Flagellar biosynthesis protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D Dda3937_02663 Flagellar protein flhE K03516 flhE; flagellar protein FlhE
D Dda3937_03966 flhE; conserved protein K03516 flhE; flagellar protein FlhE
D Dda3937_03965 flhA; predicted flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D Dda3937_02774 flhB; Flagellar biosynthesis protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D Dda3937_02203 flgA; Flagellar basal-body P-ring formation protein flgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Dda3937_02204 flgB; Flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D Dda3937_04345 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D Dda3937_02205 flgD; Flagellar basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D Dda3937_02206 flgE; Flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D Dda3937_02207 flgF; Flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF
D Dda3937_02208 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D Dda3937_02209 flgH; Flagellar L-ring protein flgH K02393 flgH; flagellar L-ring protein FlgH
D Dda3937_02210 flgI; Flagellar P-ring protein flgI K02394 flgI; flagellar P-ring protein FlgI
D Dda3937_02211 flgJ; flagellum-specific muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Dda3937_02212 flgK; Flagellar hook-associated protein flgK K02396 flgK; flagellar hook-associated protein 1
D Dda3937_02213 flgL; Flagellar hook-associated protein flgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Dda3937_03427 fliC; flagellar filament structural protein (flagellin) K02406 fliC; flagellin
D Dda3937_02230 fliD; Flagellar hook-associated protein fliD K02407 fliD; flagellar hook-associated protein 2
D Dda3937_02229 fliS; Flagellar biosynthesis protein fliS K02422 fliS; flagellar secretion chaperone FliS
D Dda3937_02228 fliT; Flagellar biosynthesis protein fliT K02423 fliT; flagellar protein FliT
D Dda3937_02783 motA; Flagellar motor rotation protein motA K02556 motA; chemotaxis protein MotA
D Dda3937_02782 motB; Flagellar motor rotation protein motB K02557 motB; chemotaxis protein MotB
D Dda3937_02202 flgM; Negative regulator of flagellin synthesis flgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Dda3937_04632 flgN; Flagellar biosynthesis protein flgN K02399 flgN; flagellar biosynthesis protein FlgN
D Dda3937_01581 fliY; cystine transporter subunit; periplasmic-binding component of ABC superfamily K02424 tcyA; L-cystine transport system substrate-binding protein
D Dda3937_03417 fliZ; predicted regulator of FliA activity K02425 fliZ; regulator of sigma S factor FliZ
D Dda3937_03534 rpoD; RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D Dda3937_02785 flhD; Flagellar transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD
D Dda3937_02784 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC
D Dda3937_00682 rpoN; RNA polymerase, sigma 54 (sigma N) factor K03092 rpoN; RNA polymerase sigma-54 factor
D Dda3937_03418 fliA; RNA polymerase, sigma 28 (sigma F) factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Dda3937_00198 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Dda3937_02131 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ddd01501]
D Dda3937_03661 ompF; outer membrane porin 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D Dda3937_03660 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_03657 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_01977 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Dda3937_02258 nagZ; beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dda3937_04054 oppA; oligopeptide transport; periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_03136 mppA; ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04040 ABC transporter, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04053 oppB; oligopeptide transporter subunit; membrane component of ABC superfamily K15581 oppB; oligopeptide transport system permease protein
D Dda3937_04052 oppC; oligopeptide transport system permease OppC K15582 oppC; oligopeptide transport system permease protein
D Dda3937_04051 oppD; oligopeptide transporter subunit; ATP-binding component of ABC superfamily K15583 oppD; oligopeptide transport system ATP-binding protein
D Dda3937_04050 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Dda3937_01839 Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03299 acrA; Acriflavin resistance protein A; Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03300 acrB; multidrug efflux system protein K18138 acrB; multidrug efflux pump
D Dda3937_01840 Multidrug efflux protein K18138 acrB; multidrug efflux pump
D Dda3937_01841 Probable outer membrane multidrug efflux lipoprotein, OMF family precursor K18139 oprM; outer membrane protein, multidrug efflux system
D Dda3937_00784 Two-component hybrid sensor and regulator K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Dda3937_00785 Phosphate regulon transcriptional regulatory protein phoB K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Dda3937_00786 Probable RND efflux membrane fusion protein K18145 adeA; membrane fusion protein, multidrug efflux system
D Dda3937_00787 RND multidrug efflux transporter; Acriflavin resistance protein K18146 adeB; multidrug efflux pump
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_00363 mrcA; penicillin-binding protein 1A (PBP1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dda3937_02483 mrdA; peptidoglycan synthetase, penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Dda3937_00764 penicillin binding protein, peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_02444 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_03789 Metallo-beta-lactamase superfamily protein K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:ddd01502]
D Dda3937_01186 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dda3937_03446 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D Dda3937_02442 murF; UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dda3937_02441 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dda3937_02438 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ddd01503]
D Dda3937_02089 phoQ; sensory histidine kinase in two-compoent regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Dda3937_02088 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Dda3937_01131 eptB; predicted metal dependent hydrolase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D Dda3937_02050 crcA; Lipid A acylation protein PagP, palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D Dda3937_01080 arnB; UDP-4-amino-4-deoxy-L-arabinose alpha-ketoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D Dda3937_01079 arnC; Undecaprenyl-phosphate 4-amino-4-deoxy-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D Dda3937_01078 yfbG; bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D Dda3937_01077 yfbH; undecaprenyl phosphate-alpha-L-Ara4FN (4-deoxy-4-formamido-L-arabinose) deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D Dda3937_01076 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D Dda3937_01075 Polymyxin resistance protein PmrL, sucrose-6 phosphate hydrolase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D Dda3937_01074 Polymyxin resistance protein PmrM K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D Dda3937_00527 pmrB; sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D Dda3937_00526 pmrA; Response regulator of the two-component transcriptional regulatory system (PmrA-PmrB BasR-BasS) K07771 basR; two-component system, OmpR family, response regulator BasR
D Dda3937_00525 yjdB; Putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Dda3937_03113 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D Dda3937_03112 sapB; predicted antimicrobial peptide transporter subunit; membrane component of ABC superfamily K19227 sapB; cationic peptide transport system permease protein
D Dda3937_03111 sapC; predicted antimicrobial peptide transporter subunit; membrane component of ABC superfamily K19228 sapC; cationic peptide transport system permease protein
D Dda3937_03110 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D Dda3937_03109 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D Dda3937_03861 prtA; Secreted protease A precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_03860 prtC; Secreted protease C precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_01649 prtG; Secreted protease C precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_04583 prtB; Secreted protease B precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_01898 cutF; Copper homeostasis protein CutF precursor / Lipoprotein NlpE involeved in surface adhesion K06079 cutF; copper homeostasis protein (lipoprotein)
D Dda3937_03052 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D Dda3937_03053 cpxR; Transcriptional regulatory protein cpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D Dda3937_00858 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_00437 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_03663 ycfS; hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D Dda3937_00496 degP; serine endoprotease (protease Do), membrane-associated K04771 degP; serine protease Do [EC:3.4.21.107]
D Dda3937_01111 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Dda3937_04190 ppiA; Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Dda3937_01839 Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03299 acrA; Acriflavin resistance protein A; Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03300 acrB; multidrug efflux system protein K18138 acrB; multidrug efflux pump
D Dda3937_01840 Multidrug efflux protein K18138 acrB; multidrug efflux pump
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_01888 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Dda3937_03194 D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03212 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03211 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03195 D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D Dda3937_03193 D-alanine carrier protein DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Dda3937_00956 Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ddd01000]
C 01001 Protein kinases [BR:ddd01001]
D Dda3937_00788 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Dda3937_01833 Conserved domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Dda3937_01065 hipA; Toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Dda3937_03927 wzc; Tyrosine-protein kinase wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dda3937_02643 Capsular polysaccharide synthesis enzyme cpsD, exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Dda3937_01940 phoR; sensory histidine kinase in two-component regulatory system with PhoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dda3937_02089 phoQ; sensory histidine kinase in two-compoent regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Dda3937_00355 envZ; sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Dda3937_00122 rstB; Sensor protein rstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D Dda3937_03052 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D Dda3937_02817 baeS; sensory histidine kinase in two-component regulatory system with BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Dda3937_00527 pmrB; sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D Dda3937_00229 Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_02279 Sensor protein irlS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_01552 kdpD; sensory histidine kinase in two-component regulatory system with KdpE K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dda3937_02109 tctE; Sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D Dda3937_00784 Two-component hybrid sensor and regulator K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Dda3937_01422 Putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Dda3937_03787 narX; sensory histidine kinase in two-component regulatory system with NarL K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Dda3937_03549 uhpB; Sensor protein uhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Dda3937_01777 yojN; Putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D Dda3937_01775 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Dda3937_00193 barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Dda3937_02968 citA; sensory histidine kinase in two-component regulatory system with citB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D Dda3937_02537 dcuS; Fumarate respiration sensor kinase protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D Dda3937_03817 ypdA; putative sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dda3937_03181 yehU; predicted sensory kinase in two-component system with YehT K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dda3937_00329 predicted two-component system sensory kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dda3937_01117 glnL; sensory histidine kinase in two-component regulatory system with GlnG K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Dda3937_03378 yfhK; Sensor histidine kinase for the two component response regulator YfhA K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Dda3937_02781 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ddd01009]
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_03288 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Dda3937_02676 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ddd01002]
D Dda3937_01395 lspA; prolipoprotein signal peptidase (signal peptidase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dda3937_02425 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D Dda3937_01817 hybD; predicted maturation element for hydrogenase 2 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Dda3937_00737 hycI; protease involved in processing C-terminal end of HycE K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D Dda3937_03588 Glutamine amidotransferase, class I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dda3937_01827 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dda3937_00005 guaA; GMP synthetase (glutamine aminotransferase) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dda3937_03829 spr; predicted peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Dda3937_00095 ydhO; predicted lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D Dda3937_03649 nlpC; predicted lipoprotein K13695 nlpC; probable lipoprotein NlpC
D Dda3937_02099 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Dda3937_00709 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dda3937_00141 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dda3937_01964 yajL; conserved protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Dda3937_01175 ybiS; Protein ybiS precursor K19235 ybiS; L,D-transpeptidase YbiS
D Dda3937_03663 ycfS; hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D Dda3937_03653 ycbB; predicted carboxypeptidase K21470 ycbB; L,D-transpeptidase YcbB
D Dda3937_04343 pepN; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Dda3937_01054 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Dda3937_03861 prtA; Secreted protease A precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_03860 prtC; Secreted protease C precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_01649 prtG; Secreted protease C precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_04583 prtB; Secreted protease B precursor K01406 prtC; serralysin [EC:3.4.24.40]
D Dda3937_00856 ptr; protease III K01407 ptrA; protease III [EC:3.4.24.55]
D Dda3937_01996 yhjJ; predicted zinc-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dda3937_01405 Probable zinc protease pqqL K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dda3937_01298 pepA; aminopeptidase A, a cyteinylglycinase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Dda3937_03696 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D Dda3937_03238 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dda3937_02499 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Dda3937_03183 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Dda3937_02906 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Dda3937_02091 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Dda3937_00930 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Dda3937_02186 abgA; Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A K12940 abgA; aminobenzoyl-glutamate utilization protein A
D Dda3937_02187 abgB; AbgB K12941 abgB; aminobenzoyl-glutamate utilization protein B
D Dda3937_02386 Amidohydrolase amhX K14665 amhX; amidohydrolase [EC:3.5.1.-]
D Dda3937_00918 allC; N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Dda3937_01626 yebA; predicted peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D Dda3937_00878 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Dda3937_02078 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Dda3937_02682 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Dda3937_02347 ftsH; subunit of integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dda3937_03688 htpX; predicted endopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Dda3937_02510 yfgC; predicted peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D Dda3937_04488 rseP; inner membrane zinc RIP metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Dda3937_01481 Membrane-fusion protein K16922 yydH; putative peptide zinc metalloprotease protein
D Dda3937_03247 Periplasmic dipeptide transport protein of ABC transporter K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Dda3937_00494 mepA; murein DD-endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Dda3937_04538 mtfA; conserved protein K09933 mtfA; MtfA peptidase
D Dda3937_03248 D-aminopeptidease K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D Dda3937_00124 ydgD; predicted peptidase K04775 ydgD; protease YdgD [EC:3.4.21.-]
D Dda3937_00496 degP; serine endoprotease (protease Do), membrane-associated K04771 degP; serine protease Do [EC:3.4.21.107]
D Dda3937_00697 degQ; Protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D Dda3937_00696 degS; serine endoprotease, periplasmic K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D Dda3937_03570 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D Dda3937_03486 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Dda3937_02486 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Dda3937_02899 pbpG; D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D Dda3937_02351 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dda3937_03319 clpP; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Dda3937_04311 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Dda3937_03409 ycbZ; predicted peptidase K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D Dda3937_02726 lexA; DNA-binding transcriptional repressor of SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D Dda3937_03849 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dda3937_03783 prc; carboxy-terminal protease for penicillin-binding protein 3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dda3937_03131 Family S45 unassigned peptidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Dda3937_04043 sppA; protease IV (signal peptide peptidase) K04773 sppA; protease IV [EC:3.4.21.-]
D Dda3937_00583 sohB; predicted inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D Dda3937_00344 glpG; predicted intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D Dda3937_01859 mccF; Microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Dda3937_03883 hslV; peptidase component of the HslUV protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Dda3937_03246 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Dda3937_01862 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dda3937_00911 Gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D Dda3937_02814 yegQ; predicted peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Dda3937_02333 yhbV; predicted protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D Dda3937_02332 yhbU; predicted peptidase (collagenase-like) K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D Dda3937_00676 pmbA; predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 K03592 pmbA; PmbA protein
D Dda3937_00668 tldD; TldD protein K03568 tldD; TldD protein
D Dda3937_00431 hflC; modulator for HflB protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC
D Dda3937_00432 hflK; modulator for HflB protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ddd01003]
D Dda3937_00333 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Dda3937_01990 bcsA; Cellulose synthase (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D Dda3937_00715 mtgA; biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Dda3937_04295 mrcB; penicillin-binding protein 1B (PBP1B) K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D Dda3937_00363 mrcA; penicillin-binding protein 1A (PBP1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dda3937_03488 rhlA; (R)-3-hydroxydecanoyl-ACP:CoA transacylase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D Dda3937_01863 Rhamnosyltransferase I, subunit B K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D Dda3937_00277 rffM; UDP-N-acetyl-D-mannosaminuronic acid (ManNAcA) transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D Dda3937_00275 rffT; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D Dda3937_00268 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Dda3937_03563 opgH; Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Dda3937_04136 Glycosyltransferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ddd01005]
D Dda3937_01888 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Dda3937_01889 lpxB; tetraacyldisaccharide-1-P synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Dda3937_02232 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Dda3937_01886 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Dda3937_01681 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Dda3937_03204 lpxK; lipid A 4'kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Dda3937_03561 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Dda3937_04573 lpxM; acyl (myristate) transferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D Dda3937_02587 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase lpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D Dda3937_02265 ddg; Lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D Dda3937_03831 yeiU; undecaprenyl pyrophosphate phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D Dda3937_02033 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Dda3937_01076 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D Dda3937_02050 crcA; Lipid A acylation protein PagP, palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D Dda3937_00525 yjdB; Putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Dda3937_01131 eptB; predicted metal dependent hydrolase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D Dda3937_00038 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Dda3937_03202 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Dda3937_00686 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Dda3937_00687 kdsD; D-Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Dda3937_02039 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Dda3937_02032 Lipopolysaccharide core biosynthesis glycosyl transferase kdtX K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D Dda3937_02040 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Dda3937_02037 waaG; UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D Dda3937_02038 rfaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D Dda3937_00927 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Dda3937_04390 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Dda3937_00178 rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D Dda3937_02041 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding protein K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Dda3937_03920 dTDP-rhamnosyl transferase rfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Dda3937_00276 wzyE; Enterobacterial Common Antigen (ECA) polysaccharide chain polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D Dda3937_00268 rfe; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Dda3937_02272 Lipid carrier : UDP-N-acetylgalactosaminyltransferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddd01011]
D Dda3937_00695 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dda3937_04216 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dda3937_02437 murC; UDP-N-acetylmuramate:L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Dda3937_02440 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dda3937_02443 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dda3937_01186 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dda3937_03446 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D Dda3937_03898 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Dda3937_01859 mccF; Microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Dda3937_02441 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dda3937_02438 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Dda3937_00173 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dda3937_01605 mviN; predicted inner membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D Dda3937_00363 mrcA; penicillin-binding protein 1A (PBP1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dda3937_04295 mrcB; penicillin-binding protein 1B (PBP1B) K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D Dda3937_02483 mrdA; peptidoglycan synthetase, penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Dda3937_00764 penicillin binding protein, peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_02444 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_03486 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Dda3937_02486 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Dda3937_02351 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dda3937_02899 pbpG; D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D Dda3937_00715 mtgA; biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Dda3937_01175 ybiS; Protein ybiS precursor K19235 ybiS; L,D-transpeptidase YbiS
D Dda3937_03663 ycfS; hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D Dda3937_03653 ycbB; predicted carboxypeptidase K21470 ycbB; L,D-transpeptidase YcbB
D Dda3937_00494 mepA; murein DD-endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Dda3937_00095 ydhO; predicted lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D Dda3937_03829 spr; predicted peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D Dda3937_01626 yebA; predicted peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D Dda3937_00402 slt; lytic murein transglycosylase, soluble K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Dda3937_00859 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D Dda3937_01212 mltB; membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Dda3937_03339 orf4; Membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Dda3937_03401 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D Dda3937_03971 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Dda3937_03380 yfhD; lytic transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D Dda3937_02248 yceG; conserved protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Dda3937_02485 rlpA; minor lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Dda3937_00858 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_00437 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_02371 ybjR; Probable N-acetylmuramoyl-L-alanine amidase ybjR K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_04401 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_04620 lpp; murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:ddd01004]
D Dda3937_04204 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dda3937_03616 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_04203 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_04302 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_00959 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dda3937_02115 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Dda3937_01221 3-oxoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dda3937_02246 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dda3937_03279 Probable short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_04626 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dda3937_03410 fabA; beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Dda3937_01887 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dda3937_03108 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dda3937_01790 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Dda3937_03307 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Dda3937_00566 yciA; esterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D Dda3937_02455 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dda3937_02453 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dda3937_02724 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D Dda3937_04202 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Dda3937_00171 ygiH; conserved inner membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dda3937_01255 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ddd01008]
D Dda3937_03039 MbtH-like protein K05375 mbtH; MbtH protein
D Dda3937_02432 cbsB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase, chrysobactin biosynthesis K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D Dda3937_02667 4'-phosphopantetheinyl transferase entD K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D Dda3937_02433 cbsE; 2,3-dihydroxybenzoate-AMP ligase, chrysobactin biosynthesis K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D Dda3937_03038 chrysobactin synthetase cbsF K24101 vabF; L-arginine---[L-arginyl-carrier protein] ligase [EC:6.2.1.63]
D Dda3937_00744 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Dda3937_02690 Probable aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:ddd01006]
D Dda3937_01961 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Dda3937_03525 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Dda3937_00884 ispU; undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Dda3937_00435 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dda3937_03881 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Dda3937_02723 ubiA; p-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Dda3937_01972 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ddd01007]
D Dda3937_03502 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dda3937_01562 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dda3937_00511 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Dda3937_00065 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dda3937_04188 trpS; tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dda3937_01678 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dda3937_01606 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dda3937_03935 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dda3937_01396 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dda3937_01296 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dda3937_02477 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dda3937_02292 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dda3937_01616 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dda3937_03662 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dda3937_03706 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dda3937_01011 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Dda3937_01010 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Dda3937_00132 serS; seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dda3937_03912 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dda3937_03683 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dda3937_03152 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dda3937_03679 pheS; phenylalanine tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dda3937_03678 pheT; phenylalanine tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dda3937_00649 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_03656 aspC; aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Dda3937_01017 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D Dda3937_04027 yfbQ; predicted aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Dda3937_02410 yfdZ; prediected aminotransferase, PLP-dependent K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Dda3937_03452 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D Dda3937_00920 ybdL; Aspartate aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D Dda3937_01857 Aspartate aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D Dda3937_02974 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dda3937_02042 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dda3937_03749 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Dda3937_00547 argD; Ornithine aminotransferase; Acetylornithine aminotransferase; N-succinyl-L,L-diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Dda3937_04150 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dda3937_02856 acsF; 4-aminobutyrate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Dda3937_01188 Ornithine aminotransferase; Acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Dda3937_02686 ygjG; Ornithine aminotransferase; Acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Dda3937_03747 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Dda3937_00503 hemL; glutamate-1-semialdehyde aminotransferase (aminomutase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dda3937_00800 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_02409 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Dda3937_00632 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_00250 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dda3937_04327 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_01041 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Dda3937_00917 pucG; Serine--pyruvate aminotransferase / L-alanine:glyoxylate aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D Dda3937_01080 arnB; UDP-4-amino-4-deoxy-L-arabinose alpha-ketoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D Dda3937_00273 rffA; dTDP-4-keto-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ddd00194]
D Dda3937_00144 atpC; F1 sector of membrane-bound ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Dda3937_00145 atpD; F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Dda3937_00146 atpG; F1 sector of membrane-bound ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Dda3937_00147 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Dda3937_00148 atpH; F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Dda3937_00149 atpF; F0 sector of membrane-bound ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Dda3937_00150 atpE; F0 sector of membrane-bound ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Dda3937_00151 atpB; F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Dda3937_00152 atpI; ATP synthase, membrane-bound accesory subunit K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ddd03000]
D Dda3937_00602 araC; DNA-binding transcriptional dual regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D Dda3937_02878 rhaR; DNA-binding protein transcriptional activator, L-rhamnose-binding protein K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D Dda3937_02877 rhaS; DNA-binding protein transcriptional activator, L-rhamnose-binding protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D Dda3937_03174 yfeG; Ethanolamine operon regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D Dda3937_00283 Ethanolamine operon regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D Dda3937_00754 Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Dda3937_00398 rob; DNA-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Dda3937_02907 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Dda3937_02177 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dda3937_00867 gcvA; DNA-binding transcriptional dual regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Dda3937_01858 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Dda3937_04308 LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Dda3937_00255 ilvY; DNA-binding transcriptional dual regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D Dda3937_02052 metR; DNA-binding protein transcriptional activator, homocysteine-binding protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Dda3937_00382 nhaR; DNA-binding transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Dda3937_03892 oxyR; DNA-binding transcriptional dual regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Dda3937_00409 argP; DNA-binding transcriptional activator, replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Dda3937_00588 cysB; DNA-binding protein transcriptional dual regulator, O-acetyl-L-serine-binding protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D Dda3937_04117 cbl; transcriptional regulator of cysteine biosynthesis (LysR family) K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D Dda3937_00372 Malonate utilization transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D Dda3937_02185 abgR; Regulatory protein (induces abgABT, used to catabolize p-aminobenzoyl-glutamate) K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D Dda3937_01461 Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D Dda3937_01235 Transcriptional regulator, LysR family, in glycolate utilization operon K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Dda3937_00648 nac; Nitrogen assimilation control protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Dda3937_04313 yjiE; Putative transcriptional regulator LYSR-type K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D Dda3937_00669 aaeR; Putative transcriptional regulator LYSR-type K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D Dda3937_04419 hdfR; DNA-binding transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D Dda3937_03485 deoR; DNA-binding transcriptional repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D Dda3937_00345 glpR; DNA-binding transcriptional repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Dda3937_00745 lacI; Transcriptional repressor of the lac operon K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D Dda3937_02396 ganR; transcriptional activator of the gan regulon K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D Dda3937_03030 rafR; Raffinose operon transcriptional regulatory protein rafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dda3937_02517 galS; Mgl repressor and galactose ultrainduction factor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dda3937_02360 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dda3937_02586 galR; Galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dda3937_00981 xylR; DNA-binding protein transcriptional activator, xylose-binding protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dda3937_03885 cytR; DNA-binding transcriptional regulatory protein CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Dda3937_02532 lcfR; Fructose repressor FruR, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D Dda3937_02450 fruR; DNA-binding transcriptional dual regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D Dda3937_01265 scrR; Fructose repressor FruR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D Dda3937_00097 purR; DNA-binding protein transcriptional repressor, hypoxanthine-binding protein K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D Dda3937_02648 lfeR; Putative transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Dda3937_00322 gntR; DNA-binding transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Dda3937_04087 phnF; Transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D Dda3937_01666 yhfR; Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Dda3937_03182 Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family K03710 K03710; GntR family transcriptional regulator
D Dda3937_02926 fadR; DNA-binding transcriptional dual regulator of fatty acid metabolism K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D Dda3937_03099 pdhR; DNA-binding transcriptional dual regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Dda3937_02583 DNA-binding transcriptional repressor K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D Dda3937_02737 exuR; DNA-binding transcriptional regulatory protein ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D Dda3937_04316 Transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dda3937_04149 Putative GntR-family regulatory protein and aminotransferase near polyamine transporter K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dda3937_01326 Transcriptional regulator, GntR family / AMINOTRANSFERASE CLASS-I K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dda3937_01659 ydfH; Transcriptional regulator, GntR family K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D Dda3937_03413 betI; DNA-binding transcriptional regulatory protein BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D Dda3937_03298 acrR; DNA-binding transcriptional repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D Dda3937_03259 ttk; DNA-associated division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator
D Dda3937_03539 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Dda3937_03894 fabR; DNA-binding transcriptional regulatory protein FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D Dda3937_00156 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Dda3937_00128 lrp; DNA-binding protein transcriptional dual regulator, leucine-binding protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_01042 Transcriptional regulator BkdR of isoleucine and valine catabolism operon K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_01317 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_00068 Transcriptional regulator BkdR of isoleucine and valine catabolism operon K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_03312 ybaO; predicted DNA-binding transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D Dda3937_00840 Transcriptional regulator ahyR/asaR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D Dda3937_03218 expR; DNA-binding transcriptional regulatory protein ExpR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D Dda3937_00757 Multiple antibiotic resistance protein marR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D Dda3937_01174 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Dda3937_00475 slyA; DNA-binding transcriptional activator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Dda3937_00894 mprA; DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D Dda3937_00462 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Dda3937_01902 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Dda3937_04160 cueR; copper responsive transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Dda3937_01561 fur; DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Dda3937_02727 zur; Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Dda3937_02130 iclR; DNA-binding transcriptional repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Dda3937_03685 kdgR; DNA-binding transcriptional regulatory protein KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Dda3937_02871 Hypothetical transcriptional regulator yiaJ K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D Dda3937_00411 pir; Hypothetical transcriptional regulator yiaJ K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D Dda3937_00546 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dda3937_00042 fnr; DNA-binding transcriptional dual regulator, global regulator of anaerobic growth K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Dda3937_02374 iscR; Fe-S cluster-containing transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Dda3937_02608 nsrR; DNA-binding transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Dda3937_03575 yebK; predicted DNA-binding transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D Dda3937_04217 birA; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/DNA-binding protein transcriptional repressor, bio-5'-AMP-binding protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Dda3937_01595 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Dda3937_00401 trpR; DNA-binding protein transcriptional repressor, tryptophan-binding protein K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D Dda3937_03633 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_01308 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_03528 nlp; Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_01409 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_01755 Transcriptional regulator K07724 ner; Ner family transcriptional regulator
D Dda3937_02767 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_00007 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_03234 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_01733 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_02763 Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D Dda3937_01356 yabN; SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA K11925 sgrR; SgrR family transcriptional regulator
D Dda3937_02678 nadR; NadR transcriptional repressor / ribosylnicotinamide kinase / NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D Dda3937_01066 hipB; Protein hipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Dda3937_00807 Response regulator of zinc sigma-54-dependent two-component system K11908 vasH; sigma-54 dependent transcriptional regulator
D Dda3937_01437 ygaA; Anaerobic nitric oxide reductase transcription regulator norR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D Dda3937_00743 fhlA; DNA-binding transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D Dda3937_02180 nifA; Mo/Fe-nitrogenase-specific transcriptional regulator NifA K02584 nifA; Nif-specific regulatory protein
D Dda3937_02640 cdaR; regulatory protein for D-galactarate, D-glucarate, and D-glycerate metabolism K02647 cdaR; carbohydrate diacid regulator
D Dda3937_04000 modE; DNA-binding transcriptional dual regulator K02019 modE; molybdate transport system regulatory protein
D Dda3937_02266 Molybdate-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D Dda3937_01170 Transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator
D Dda3937_00327 nikR; Nickel responsive regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Dda3937_03887 metJ; DNA-binding protein transcriptional repressor, S-adenosylmethionine-binding protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D Dda3937_00258 putA; Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Dda3937_03964 bglG; Beta-glucoside bgl operon antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D Dda3937_02588 Beta-glucoside bgl operon antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D Dda3937_03967 bolA; regulator of penicillin binding proteins and beta lactamase transcription (morphogene) K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Dda3937_02070 rfaH; transcription antiterminator protein K05785 rfaH; transcriptional antiterminator RfaH
D Dda3937_03530 argR; DNA-binding transcriptional regulatory protein K03402 argR; transcriptional regulator of arginine metabolism
D Dda3937_04498 nagC; DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine K02565 nagC; N-acetylglucosamine repressor
D Dda3937_04130 dgsA; DNA-binding transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene
D Dda3937_00993 mtlR; DNA-binding repressor K02562 mtlR; mannitol operon repressor
D Dda3937_03124 tyrR; DNA-binding protein transcriptional dual regulator, tyrosine-binding protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D Dda3937_02508 gcvR; DNA-binding transcriptional repressor, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor
D Dda3937_03115 pspF; DNA-binding transcriptional activator K03974 pspF; psp operon transcriptional activator
D Dda3937_03118 pspC; DNA-binding transcriptional activator K03973 pspC; phage shock protein C
D Dda3937_00677 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D Dda3937_02192 Phage-related protein K07733 alpA; prophage regulatory protein
D Dda3937_01305 DNA-binding protein K07733 alpA; prophage regulatory protein
D Dda3937_01590 Putative DNA binding protein K07733 alpA; prophage regulatory protein
D Dda3937_02760 alpA; DNA-binding protein K07733 alpA; prophage regulatory protein
D Dda3937_00943 putative regulatory protein K07733 alpA; prophage regulatory protein
D Dda3937_02688 Transcriptional regulator K07734 paiB; transcriptional regulator
D Dda3937_00425 yqgE; predicted protein K07735 algH; putative transcriptional regulator
D Dda3937_00510 dksA; RNAP-binding protein modulating ppGpp and iNTP regulation K06204 dksA; RNA polymerase-binding transcription factor
D Dda3937_01954 ybaD; Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D Dda3937_00935 crl; DNA-binding transcriptional regulator K11926 crl; sigma factor-binding protein Crl
D Dda3937_02447 mraZ; conserved protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ddd03021]
D Dda3937_01515 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dda3937_00220 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dda3937_00221 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dda3937_01128 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Dda3937_03534 rpoD; RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D Dda3937_03911 rpoS; RNA polymerase, sigma S (sigma 38) factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D Dda3937_03844 rpoE; RNA polymerase, sigma 24 (sigma E) factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dda3937_01165 heme uptake regulator K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Dda3937_02015 rpoH; RNA polymerase, sigma 32 (sigma H) factor K03089 rpoH; RNA polymerase sigma-32 factor
D Dda3937_00682 rpoN; RNA polymerase, sigma 54 (sigma N) factor K03092 rpoN; RNA polymerase sigma-54 factor
D Dda3937_03418 fliA; RNA polymerase, sigma 28 (sigma F) factor K02405 fliA; RNA polymerase sigma factor FliA
D Dda3937_01374 hepA; RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D Dda3937_02342 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D Dda3937_01957 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D Dda3937_00216 nusG; transcription termination factor K02601 nusG; transcription termination/antitermination protein NusG
D Dda3937_00705 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D Dda3937_00706 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D Dda3937_03845 rseA; anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D Dda3937_03846 rseB; anti-sigma factor K03598 rseB; sigma-E factor negative regulatory protein RseB
D Dda3937_03847 rseC; RseC protein involved in reduction of the SoxR iron-sulfur cluster K03803 rseC; sigma-E factor negative regulatory protein RseC
D Dda3937_00510 dksA; RNAP-binding protein modulating ppGpp and iNTP regulation K06204 dksA; RNA polymerase-binding transcription factor
D Dda3937_02350 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D Dda3937_00353 greB; Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D Dda3937_00267 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D Dda3937_01895 rof; modulator of Rho-dependent transcription termination K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:ddd03019]
D Dda3937_00056 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Dda3937_00666 rng; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Dda3937_03850 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dda3937_02609 rnr; exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dda3937_02152 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Dda3937_00265 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D Dda3937_04013 rhlE; Putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Dda3937_02335 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Dda3937_00308 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dda3937_00198 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dda3937_02337 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dda3937_00267 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D Dda3937_03867 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dda3937_00385 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dda3937_02721 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dda3937_00434 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Dda3937_01691 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dda3937_00513 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Dda3937_03387 nudH; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Dda3937_03151 csrA; post transcriptional regulatory RNA-binding protein K03563 csrA; carbon storage regulator
D Dda3937_00661 yhdA; CsrB/C sRNA degradation factor K18765 csrD; RNase E specificity factor CsrD
D Dda3937_03880 rraA; ribonuclease E (RNase E) inhibitor protein K02553 rraA; regulator of ribonuclease activity A
D Dda3937_01288 rraB; ribonuclease E inhibitor protein K09893 rraB; regulator of ribonuclease activity B
D Dda3937_00679 yhbJ; nucleotide-binding NTPase K06958 rapZ; RNase adapter protein RapZ
D Dda3937_04705 ATP-dependent helicase hrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D Dda3937_00507 hrp; predicted ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D Dda3937_04681 ryhA; small RNA K18504 arcZ; small regulatory RNA ArcZ
D Dda3937_04675 tke1; glmS activator sRNA K15841 glmY; small regulatory RNA GlmY
D Dda3937_04679 ryiA; regulatory sRNA K18505 glmZ; small regulatory RNA GlmZ
D Dda3937_04678 ryhB; regulatory antisense RNA K18507 ryhB; small regulatory RNA RyhB
D Dda3937_04676 sraD; MicA regulatory antisense RNA K18511 micA; small regulatory RNA MicA
D Dda3937_04688 rsmB; RsmB regulatory RNA K18515 csrB; small regulatory RNA CsrB
D Dda3937_04693 rprA; RprA RNA; positive regulatory RNA for rpoS translation K18518 rprA; small regulatory RNA RprA
D Dda3937_04687 gcvB; regulatory RNA K18521 gcvB; small regulatory RNA GcvB
D Dda3937_04677 rygA; small RNA K18522 omrA; small regulatory RNA OmrA
D Dda3937_04680 spf; Spot 42 RNA K18527 spf; small regulatory RNA Spot 42
C 03041 Spliceosome
C 03011 Ribosome [BR:ddd03011]
D Dda3937_04328 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Dda3937_00879 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Dda3937_01499 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Dda3937_01514 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Dda3937_01508 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Dda3937_02617 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Dda3937_03982 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Dda3937_01505 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Dda3937_00702 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Dda3937_01494 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Dda3937_01513 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Dda3937_04413 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Dda3937_01512 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Dda3937_04411 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Dda3937_02338 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Dda3937_03945 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Dda3937_01502 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Dda3937_02619 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Dda3937_01497 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Dda3937_00381 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Dda3937_03532 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Dda3937_00218 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Dda3937_04706 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D Dda3937_04221 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Dda3937_01495 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Dda3937_01504 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Dda3937_01506 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Dda3937_00466 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Dda3937_00219 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Dda3937_00217 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Dda3937_04437 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Dda3937_00701 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Dda3937_01503 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Dda3937_01510 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Dda3937_01500 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Dda3937_01516 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Dda3937_01507 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Dda3937_03948 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Dda3937_03680 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Dda3937_04463 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Dda3937_01498 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Dda3937_01496 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Dda3937_04715 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D Dda3937_02354 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Dda3937_03263 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Dda3937_01501 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Dda3937_01509 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Dda3937_03301 ykgM; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D Dda3937_04717 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D Dda3937_04201 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Dda3937_03264 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Dda3937_04716 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D Dda3937_03681 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Dda3937_03302 ykgO; rpmJ (L36)-like protein K02919 RP-L36; large subunit ribosomal protein L36
D Dda3937_04714 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Dda3937_03820 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Dda3937_04223 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04651 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04658 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04662 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04226 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04225 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04654 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04653 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04663 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04224 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04665 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04659 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04657 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04656 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04661 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04664 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04666 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04222 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04652 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ddd03009]
D Dda3937_03850 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dda3937_02152 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Dda3937_03851 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase
D Dda3937_02352 obgE; GTPase involved in cell partioning and DNA repair K03979 obgE; GTPase [EC:3.6.5.-]
D Dda3937_00510 dksA; RNAP-binding protein modulating ppGpp and iNTP regulation K06204 dksA; RNA polymerase-binding transcription factor
D Dda3937_02342 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D Dda3937_01957 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D Dda3937_00216 nusG; transcription termination factor K02601 nusG; transcription termination/antitermination protein NusG
D Dda3937_03822 rsuA; 16S rRNA pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Dda3937_01381 rsmA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Dda3937_01521 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Dda3937_02317 yjjT; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Dda3937_02011 yhhF; 16S rRNA m(2)G966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Dda3937_00423 yggJ; predicted protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Dda3937_03780 Ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D Dda3937_00153 gidB; methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Dda3937_02446 rsmH; 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Dda3937_00721 rsmI; 16S rRNA C1402 ribose 2'-O-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Dda3937_01055 yhiQ; predicted SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Dda3937_00016 rrmA; 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D Dda3937_02610 rlmB; 23S rRNA (Gm2251)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Dda3937_02348 rrmJ; Cell division protein ftsJ / Ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Dda3937_03553 rlmG; predicted methyltransferase small domain protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D Dda3937_02482 ybeA; conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Dda3937_01052 yhiR; predicted DNA (exogenous) processing protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Dda3937_03517 rlmL; 23S rRNA m2G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D Dda3937_04309 ygdE; predicted methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D Dda3937_03702 rlmN; 23S rRNA m(2)A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Dda3937_00194 rumA; 23S rRNA (Uracil-5-) -methyltransferase rumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Dda3937_03472 rumB; 23S rRNA m(5)U747 methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D Dda3937_01375 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Dda3937_00580 rluB; 23S rRNA pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Dda3937_04198 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Dda3937_01572 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Dda3937_02083 rluE; 23S rRNA pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Dda3937_00891 yfiF; predicted methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D Dda3937_02319 rimI; acetylase for 30S ribosomal subunit protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Dda3937_01603 rimJ; ribosomal-protein-S5-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D Dda3937_03479 rimK; Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D Dda3937_03946 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D Dda3937_03494 yliG; MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Dda3937_03348 ycaO; conserved protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D Dda3937_01597 prmA; methylase for 50S ribosomal subunit protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Dda3937_00492 prmB; ribosomal protein L3 N5-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Dda3937_02090 ycfD; hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D Dda3937_02402 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D Dda3937_00056 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Dda3937_00666 rng; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Dda3937_00426 yqgF; predicted Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Dda3937_02955 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D Dda3937_02335 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Dda3937_03841 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D Dda3937_02151 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Dda3937_03709 der; 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits K03977 engA; GTPase
D Dda3937_00433 hflX; predicted GTPase K03665 hflX; GTPase
D Dda3937_01527 rimN; tRNA (ANN) t(6)A37 threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Dda3937_01127 spoT; GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Dda3937_02340 rbfA; 30S ribosome binding factor K02834 rbfA; ribosome-binding factor A
D Dda3937_02343 yhbC; conserved protein K09748 rimP; ribosome maturation factor RimP
D Dda3937_01677 ybcJ; predicted RNA-binding protein K14761 rlbA; ribosome-associated protein
D Dda3937_02481 ybeB; predicted protein K09710 ybeB; ribosome-associated protein
D Dda3937_02469 ybeY; conserved protein K07042 ybeY; probable rRNA maturation factor
D Dda3937_02349 yhbY; predicted RNA-binding protein K07574 yhbY; RNA-binding protein
D Dda3937_00675 yjgA; conserved protein K09889 yjgA; ribosome-associated protein
D Dda3937_00681 hpf; Ribosome-associated factor K05808 hpf; ribosome hibernation promoting factor
D Dda3937_01570 raiA; cold shock protein associated with 30S ribosomal subunit K05809 raiA; ribosome-associated inhibitor A
D Dda3937_02958 ychF; predicted GTP-binding protein K06942 ychF; ribosome-binding ATPase
D Dda3937_04200 yceD; conserved protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ddd03016]
D Dda3937_01051 elaC; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Dda3937_00013 Ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D Dda3937_00174 cca; multifunctional tRNA nucleotidyl transferase, 2'3'-cyclic phosphodiesterase, 2'-nucleotidase, and phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Dda3937_03502 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dda3937_03912 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dda3937_01396 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dda3937_02477 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dda3937_03935 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dda3937_01562 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dda3937_01606 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dda3937_02292 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dda3937_01616 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dda3937_03152 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dda3937_03662 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dda3937_03683 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dda3937_00132 serS; seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dda3937_01678 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dda3937_01296 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dda3937_03706 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dda3937_03679 pheS; phenylalanine tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dda3937_03678 pheT; phenylalanine tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dda3937_00065 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dda3937_04188 trpS; tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dda3937_01121 dtd; D-Tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Dda3937_02254 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Dda3937_03398 yggH; tRNA (m7G46) methyltransferase, SAM-dependent K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Dda3937_03913 yaeB; conserved protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Dda3937_02105 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Dda3937_02339 truB; tRNA U55 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Dda3937_03908 truD; tRNA(Glu) U13 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Dda3937_02172 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_04379 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_01527 rimN; tRNA (ANN) t(6)A37 threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Dda3937_00435 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dda3937_01064 mnmE; 5-methylaminomethyl-2-thiouridine-synthesizing GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Dda3937_00154 gidA; glucose-inhibited cell-division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Dda3937_00161 cysQ; PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Dda3937_01061 rnpA; protein C5 component of RNase P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Dda3937_04682 rnpB; RNase P, RNA component; M1 RNA K01978 rnpB; M1 RNA
D Dda3937_00092 rnt; ribonuclease T (RNase T) K03683 rnt; ribonuclease T [EC:3.1.13.-]
D Dda3937_03257 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Dda3937_03104 rnb; ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Dda3937_02918 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Dda3937_00508 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Dda3937_00403 yjjK; ABC transporter ATP-binding protein yjjK K06020 ettA; energy-dependent translational throttle protein EttA
D Dda3937_01011 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Dda3937_01010 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Dda3937_00511 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Dda3937_04156 ybaK; bifunctional cys-tRNA Pro deacetylase/cys-tRNA Cys deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Dda3937_02426 Putative cytoplasmic protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Dda3937_03381 tadA; tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Dda3937_03441 dusA; tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Dda3937_01596 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Dda3937_02904 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D Dda3937_02467 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Dda3937_01611 cmoA; tRNA methyltransferase, S-adenosyl-L-methionine-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Dda3937_01610 cmoB; tRNA methyltransferase, S-adenosyl-L-methionine-dependent methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D Dda3937_03198 smtA; predicted S-adenosyl-L-methionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D Dda3937_00395 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Dda3937_03896 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D Dda3937_03947 trmD; tRNA (guanine-1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Dda3937_00891 yfiF; predicted methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D Dda3937_01126 trmH; tRNA (Guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Dda3937_02375 trmJ; tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D Dda3937_03048 yibK; predicted rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Dda3937_03842 yfiC; predicted S-adenosyl-L-methionine-dependent methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Dda3937_00873 truC; tRNA pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D Dda3937_01375 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Dda3937_02085 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Dda3937_03138 ttcA; putative tRNA 2-thiocytidine (s(2)C32) synthase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Dda3937_02007 sirA; sulfur transfer protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Dda3937_00521 yheL; subunit of the heterohexameric YheLMN (TusBCD) mediator of sulfur relay K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Dda3937_00522 yheM; subunit of the heterohexameric YheLMN (TusBCD) mediator of sulfur relay K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Dda3937_00523 yheN; tRNA 2-thiouridine synthesizing protein, subunit of sulfur transfer complex, TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Dda3937_01699 yccK; sulfur transfer protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Dda3937_03691 iscA; FeS cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D Dda3937_02302 ygfZ; predicted folate-dependent regulatory protein K06980 ygfZ; tRNA-modifying protein YgfZ
D Dda3937_03294 tRNA-(MS[2]IO[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D Dda3937_02116 mnmC; bifunctional 5-carboxymethylamino-methyl-2-thiouridine oxidoreductase/5-aminomethyl-2-thiouridine methylase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D Dda3937_01947 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Dda3937_03314 queC; enzyme in preQ0 biosynthesis K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Dda3937_00205 ygcM; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Dda3937_00204 ygcF; conserved protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Dda3937_01462 queF; NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Dda3937_00441 yjeS; predicted Fe-S electron transport protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Dda3937_02900 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Dda3937_01948 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Dda3937_01963 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Dda3937_01894 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Dda3937_02503 ypfI; predicted hydrolase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D Dda3937_03715 yeaZ; predicted peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Dda3937_03531 ygjD; predicted peptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Dda3937_00438 yjeE; ATPase with strong ADP affinity K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Dda3937_00863 ygdL; conserved protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Dda3937_02609 rnr; exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dda3937_02337 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dda3937_02403 virulence associated protein C K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ddd03012]
D Dda3937_04611 yciH; translation initiation factor K03113 EIF1; translation initiation factor 1
D Dda3937_02341 infB; translation initiation factor IF2 K02519 infB; translation initiation factor IF-2
D Dda3937_03682 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Dda3937_00540 yheS; fused predicted transporter subunits of ABC superfamily: ATP-binding components K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Dda3937_00780 Probable ABC transporter ATP binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Dda3937_00880 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D Dda3937_00474 tufA; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dda3937_00214 tufB; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dda3937_03981 fusA; protein chain elongation factor EF-G, GTP-binding protein K02355 fusA; elongation factor G
D Dda3937_04587 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D Dda3937_00882 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D Dda3937_00040 prmC; release factors RF-1 and RF-2 N5-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Dda3937_02959 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Dda3937_02362 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Dda3937_04552 yeiP; predicted translation elongation factor K02356 efp; elongation factor P
D Dda3937_02141 efp; Elongation factor EF-P K02356 efp; elongation factor P
D Dda3937_02148 poxA; predicted lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D Dda3937_02140 yjeK; lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D Dda3937_04360 Putative transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D Dda3937_02293 prfB; putative peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Dda3937_02672 prfC; peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D Dda3937_01518 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:ddd03110]
D Dda3937_02363 clpA; ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Dda3937_01574 clpB; ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Dda3937_03318 clpX; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Dda3937_03882 hslU; molecular chaperone and ATPase component of HslUV protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Dda3937_03288 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Dda3937_00385 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dda3937_03693 hscA; Chaperone protein hscA K04044 hscA; molecular chaperone HscA
D Dda3937_03638 yegD; predicted chaperone K04046 yegD; hypothetical chaperone protein
D Dda3937_02721 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dda3937_00384 dnaJ; chaperone Hsp40, co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D Dda3937_01376 djlA; DnaJ-like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D Dda3937_03692 hscB; Chaperone protein hscB K04082 hscB; molecular chaperone HscB
D Dda3937_00358 hslO; heat shock protein Hsp33 K04083 hslO; molecular chaperone Hsp33
D Dda3937_02545 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D Dda3937_02464 Small heat shock protein K04080 ibpA; molecular chaperone IbpA
D Dda3937_02534 ibpA; heat shock chaperone K04080 ibpA; molecular chaperone IbpA
D Dda3937_02535 ibpB; heat shock chaperone K04081 ibpB; molecular chaperone IbpB
D Dda3937_00359 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D Dda3937_02720 groS; Cpn10 chaperonin GroES, small subunit of GroESL K04078 groES; chaperonin GroES
D Dda3937_00496 degP; serine endoprotease (protease Do), membrane-associated K04771 degP; serine protease Do [EC:3.4.21.107]
D Dda3937_02347 ftsH; subunit of integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dda3937_00151 atpB; F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Dda3937_02047 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D Dda3937_03546 spy; putative periplasmic spheroblast formation protein K06006 cpxP; periplasmic protein CpxP/Spy
D Dda3937_03054 cpxP; Putative exported protein precursor K06006 cpxP; periplasmic protein CpxP/Spy
D Dda3937_01819 hybF; protein involved with the maturation of hydrogenases 1 and 2 K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Dda3937_01820 hypB; GTP hydrolase involved in nickel liganding into hydrogenases K04652 hypB; hydrogenase nickel incorporation protein HypB
D Dda3937_00133 dmsD; twin-arginine leader-binding protein for DmsA and TorA K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Dda3937_04190 ppiA; Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Dda3937_01680 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Dda3937_03316 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Dda3937_00528 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Dda3937_00046 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D Dda3937_01394 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D Dda3937_00536 slyD; FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Dda3937_02176 nifM; Peptidyl-prolyl cis-trans isomerase ppiD K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Dda3937_00259 ppiC; peptidyl-prolyl cis-trans isomerase C (rotamase C) K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Dda3937_01379 surA; peptidyl-prolyl cis-trans isomerase (PPIase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Dda3937_00266 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D Dda3937_00890 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D Dda3937_01788 ybbN; predicted thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin
D Dda3937_03481 grxA; glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) K03674 grxA; glutaredoxin 1
D Dda3937_01601 grxB; glutaredoxin 2 (Grx2) K03675 grxB; glutaredoxin 2
D Dda3937_00093 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D Dda3937_01111 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Dda3937_02924 dsbB; oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D Dda3937_02295 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Dda3937_02715 dipZ; Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:ddd04131]
D Dda3937_03701 ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dda3937_03335 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dda3937_03989 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_03576 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_04619 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_03288 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ddd04121]
C 03051 Proteasome [BR:ddd03051]
D Dda3937_03288 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ddd03032]
D Dda3937_03974 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dda3937_00241 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D Dda3937_03317 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D Dda3937_03677 ihfA; integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Dda3937_04067 ihfB; integration host factor (IHF), DNA-binding protein, beta subunit K05788 ihfB; integration host factor subunit beta
D Dda3937_01060 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D Dda3937_03445 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Dda3937_03533 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Dda3937_03468 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Dda3937_01891 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dda3937_01059 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dda3937_01297 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Dda3937_02479 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dda3937_02250 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dda3937_03975 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dda3937_03291 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dda3937_02318 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D Dda3937_03567 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D Dda3937_01890 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Dda3937_01112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dda3937_01130 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_00179 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_04127 tus; inhibitor of replication at Ter, DNA-binding protein K10748 tus; DNA replication terminus site-binding protein
D Dda3937_04185 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Dda3937_01556 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D Dda3937_02512 hda; ATPase regulatory factor involved in DnaA inactivation K10763 hda; DnaA-homolog protein
D Dda3937_01774 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Dda3937_01057 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Dda3937_01254 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Dda3937_01251 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Dda3937_00587 topA; DNA topoisomerase I, omega subunit K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dda3937_04577 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ddd03036]
D Dda3937_03850 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dda3937_00054 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D Dda3937_04058 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D Dda3937_01751 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D Dda3937_00241 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D Dda3937_03317 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D Dda3937_03677 ihfA; integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Dda3937_04067 ihfB; integration host factor (IHF), DNA-binding protein, beta subunit K05788 ihfB; integration host factor subunit beta
D Dda3937_00754 Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Dda3937_00398 rob; DNA-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Dda3937_01060 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D Dda3937_00718 diaA; DnaA initiator-associating factor K12961 diaA; DnaA initiator-associating protein
D Dda3937_01701 hspQ; DNA-binding protein, hemimethylated K11940 hspQ; heat shock protein HspQ
D Dda3937_02884 dps; Fe-binding and storage protein K04047 dps; starvation-inducible DNA-binding protein
D Dda3937_00844 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D Dda3937_01595 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Dda3937_00434 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Dda3937_00409 argP; DNA-binding transcriptional activator, replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Dda3937_00128 lrp; DNA-binding protein transcriptional dual regulator, leucine-binding protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_01042 Transcriptional regulator BkdR of isoleucine and valine catabolism operon K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_01317 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_00068 Transcriptional regulator BkdR of isoleucine and valine catabolism operon K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dda3937_04323 yejK; nucleotide associated protein K06899 ndpA; nucleoid-associated protein
D Dda3937_04194 mukB; predicted bifunctional chromosome partitioning protein and nucleotide hydrolase K03632 mukB; chromosome partition protein MukB
D Dda3937_03196 mukE; chromosome condensin subunit K03804 mukE; chromosome partition protein MukE
D Dda3937_03197 mukF; Ca2+ binding protein K03633 mukF; chromosome partition protein MukF
D Dda3937_02435 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D Dda3937_03905 ftsB; cell division protein K05589 ftsB; cell division protein FtsB
D Dda3937_02013 ftsE; predicted transporter subunit: ATP-binding component of ABC superfamily K09812 ftsE; cell division transport system ATP-binding protein
D Dda3937_00764 penicillin binding protein, peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_02444 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dda3937_00129 ftsK; DNA-binding membrane protein required for chromosome resolution and partitioning K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Dda3937_02445 ftsL; membrane bound cell division protein at septum containing leucine zipper motif K03586 ftsL; cell division protein FtsL
D Dda3937_03884 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D Dda3937_02436 ftsQ; membrane anchored protein involved in growth of wall at septum K03589 ftsQ; cell division protein FtsQ
D Dda3937_02439 ftsW; cell division membrane protein K03588 ftsW; cell division protein FtsW
D Dda3937_02014 ftsX; predicted transporter subunit: membrane component of ABC superfamily K09811 ftsX; cell division transport system permease protein
D Dda3937_02231 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D Dda3937_01430 zipA; cell division protein involved in Z ring assembly K03528 zipA; cell division protein ZipA
D Dda3937_02680 zapA; protein that localizes to the cytokinetic ring K09888 zapA; cell division protein ZapA
D Dda3937_03879 yiiU; conserved protein K09892 zapB; cell division protein ZapB
D Dda3937_03515 ycbW; predicted protein K18657 zapC; cell division protein ZapC
D Dda3937_02238 yacF; conserved protein K18778 zapD; cell division protein ZapD
D Dda3937_04446 yhcM; conserved protein with nucleoside triphosphate hydrolase domain K06916 zapE; cell division protein ZapE
D Dda3937_00464 ytfB; predicted cell envelope opacity-associated protein K07269 ytfB; cell division protein YtfB
D Dda3937_00858 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_00437 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dda3937_01839 Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03299 acrA; Acriflavin resistance protein A; Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_02920 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D Dda3937_04710 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D Dda3937_02919 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D Dda3937_02825 sulA; SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA
D Dda3937_03259 ttk; DNA-associated division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator
D Dda3937_01556 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D Dda3937_00662 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Dda3937_00663 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC
D Dda3937_00664 mreD; cell wall structural complex MreBCD transmembrane component MreD K03571 mreD; rod shape-determining protein MreD
D Dda3937_02484 mrdB; cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D Dda3937_01749 hypothetical protein K03496 parA; chromosome partitioning protein
D Dda3937_01254 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Dda3937_01251 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Dda3937_00154 gidA; glucose-inhibited cell-division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Dda3937_00153 gidB; methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Dda3937_00299 xerC; site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D Dda3937_02296 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D Dda3937_03934 mrp; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Dda3937_01772 Cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Dda3937_02603 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Dda3937_02585 Cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Dda3937_01113 yihA; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ddd03400]
D Dda3937_04584 ogt; O-6-alkylguanine-DNA:cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Dda3937_01546 phr; deoxyribodipyrimidine photolyase, FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Dda3937_03839 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Dda3937_03399 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Dda3937_00589 nth; DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dda3937_02236 mutT; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dda3937_03795 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) / Thiamin-phosphate pyrophosphorylase-like protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dda3937_03260 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Dda3937_01442 alkB; Alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D Dda3937_01441 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dda3937_02177 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dda3937_01013 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Dda3937_03265 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Dda3937_01541 nei; Endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D Dda3937_04048 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dda3937_03621 nfo; endonuclease IV with intrinsic 3'-5' exonuclease activity K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Dda3937_00239 nfi; endonuclease V (deoxyinosine 3'endoduclease) K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Dda3937_02294 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dda3937_01130 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_00179 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dda3937_01112 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dda3937_03467 uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
D Dda3937_03753 uvrB; excinulease of nucleotide excision repair, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D Dda3937_03959 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Dda3937_00301 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dda3937_00220 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dda3937_00221 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dda3937_01515 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dda3937_01128 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Dda3937_03640 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Dda3937_01899 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D Dda3937_00436 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D Dda3937_03389 mutH; methyl-directed mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D Dda3937_03731 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D Dda3937_03713 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Dda3937_01962 xseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Dda3937_01891 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dda3937_01059 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dda3937_01297 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Dda3937_02479 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dda3937_02250 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dda3937_03975 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dda3937_03291 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dda3937_02318 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D Dda3937_03567 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D Dda3937_03468 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Dda3937_04185 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Dda3937_02948 recB; exonuclease V (RecBCD complex), beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Dda3937_02947 recC; exonuclease V (RecBCD complex), gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Dda3937_02949 recD; exonuclease V (RecBCD complex), alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Dda3937_03154 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D Dda3937_01621 ruvA; component of RuvABC resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
D Dda3937_01622 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Dda3937_01619 ruvC; component of RuvABC resolvasome, endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Dda3937_03886 priA; Primosome factor n' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Dda3937_02618 priB; primosomal protein N K02686 priB; primosomal replication protein N
D Dda3937_03295 priC; Primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
D Dda3937_01937 sbcC; exonuclease, dsDNA, ATP-dependent K03546 sbcC; DNA repair protein SbcC/Rad50
D Dda3937_01938 sbcD; exonuclease, dsDNA, ATP-dependent K03547 sbcD; DNA repair protein SbcD/Mre11
D Dda3937_02677 radA; predicted repair protein K04485 radA; DNA repair protein RadA/Sms
D Dda3937_01058 recF; gap repair protein K03629 recF; DNA replication and repair protein RecF
D Dda3937_01125 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dda3937_03852 recO; gap repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D Dda3937_03289 recR; gap repair protein K06187 recR; recombination protein RecR
D Dda3937_02547 recN; recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D Dda3937_01935 yaiD; DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D Dda3937_02862 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Dda3937_03458 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D Dda3937_04324 yejH; predicted ATP-dependet helicase K19789 radD; DNA repair protein RadD
D Dda3937_01774 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Dda3937_01057 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Dda3937_00587 topA; DNA topoisomerase I, omega subunit K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dda3937_00241 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D Dda3937_03317 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D Dda3937_01595 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Dda3937_03677 ihfA; integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Dda3937_04067 ihfB; integration host factor (IHF), DNA-binding protein, beta subunit K05788 ihfB; integration host factor subunit beta
D Dda3937_00308 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Dda3937_00054 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D Dda3937_04058 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D Dda3937_01751 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D Dda3937_00929 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Dda3937_02726 lexA; DNA-binding transcriptional repressor of SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D Dda3937_01373 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D Dda3937_03555 dinI; DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D Dda3937_03153 recX; inhibitor of RecA K03565 recX; regulatory protein
D Dda3937_00260 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D Dda3937_02829 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D Dda3937_02894 dinG; ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Dda3937_03716 yoaA; conserved protein with nucleoside triphosphate hydrolase domain K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Dda3937_04165 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dda3937_03977 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dda3937_04164 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dda3937_03976 nrdF; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ddd03029]
D Dda3937_02341 infB; translation initiation factor IF2 K02519 infB; translation initiation factor IF-2
D Dda3937_03682 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Dda3937_00880 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D Dda3937_00474 tufA; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dda3937_00214 tufB; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dda3937_03981 fusA; protein chain elongation factor EF-G, GTP-binding protein K02355 fusA; elongation factor G
D Dda3937_03851 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase
D Dda3937_00065 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dda3937_02477 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dda3937_01616 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dda3937_01606 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dda3937_00087 Endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D Dda3937_03468 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Dda3937_01884 yaeT; conserved protein K07277 SAM50; outer membrane protein insertion porin family
D Dda3937_00385 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dda3937_02545 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D Dda3937_02721 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dda3937_02720 groS; Cpn10 chaperonin GroES, small subunit of GroESL K04078 groES; chaperonin GroES
D Dda3937_00384 dnaJ; chaperone Hsp40, co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D Dda3937_02172 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_04379 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_03692 hscB; Chaperone protein hscB K04082 hscB; molecular chaperone HscB
D Dda3937_00093 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D Dda3937_03934 mrp; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Dda3937_01972 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dda3937_01063 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dda3937_03288 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ddd02000]
D Dda3937_03205 msbA; lipid transporter subunit of ABC superfamily; membrane component K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Dda3937_03311 mdlA; predicted ATP-binding component of multidrug ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dda3937_03310 mdlB; predicted ATP-binding component of multidrug ABC transporter K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dda3937_04519 ABC transporter, ATP-binding protein, MsbA family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Dda3937_03386 Toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Dda3937_01651 prtD; Alkaline protease secretion ATP-binding protein aprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Dda3937_04326 cydC; membrane and ATP-binding components of an ABC superfamily cysteine transporter K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Dda3937_03630 cydD; cysteine transporter subunit of ABC superfamily K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D Dda3937_01419 macB; Putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D Dda3937_01930 yojI; Putative ATP-binding component of a transport system K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D Dda3937_01406 yddA; Hypothetical ABC transporter ATP-binding protein yddA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Dda3937_03518 uup; DNA-binding ABC ATPase K15738 uup; ABC transport system ATP-binding/permease protein
D Dda3937_02639 sbp; sulfate transporter subunit; periplasmic-binding component of ABC superfamily K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Dda3937_03506 cysU; Sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Dda3937_03505 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Dda3937_03504 cysA; sulfate/thiosulfate transporter subunit; ATP-binding component of ABC superfamily K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Dda3937_04002 modA; molybdate transporter subunit; periplasmic-binding component of ABC superfamily K02020 modA; molybdate transport system substrate-binding protein
D Dda3937_04003 modB; molybdate transporter subunit; membrane component of ABC superfamily K02018 modB; molybdate transport system permease protein
D Dda3937_04004 modC; molybdate transporter subunit; ATP-binding component of ABC superfamily K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Dda3937_03999 modF; ATP-binding component of molybdate ABC transporter K05776 modF; molybdate transport system ATP-binding protein
D Dda3937_03086 putative extracellular solute-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Dda3937_03085 ABC transporter, membrane component K15496 wtpB; molybdate/tungstate transport system permease protein
D Dda3937_01845 nasF; Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Dda3937_01846 nasE; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D Dda3937_01847 nasD; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Dda3937_03511 ssuA; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03017 atsR; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03002 atsR; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_04315 Taurine transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Dda3937_03509 ssuC; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03021 astB; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03003 atsB; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D Dda3937_04123 Taurine transport system permease protein tauC K15554 ssuC; sulfonate transport system permease protein
D Dda3937_03508 ssuB; Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_03004 astC; Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_04124 Taurine transport ATP-binding protein tauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dda3937_03766 sfuA; Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D Dda3937_03767 sfuB; Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D Dda3937_04384 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D Dda3937_03768 sfuC; Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Dda3937_04068 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Dda3937_01357 tbpA; thiamin transporter subunit; periplasmic-binding component of ABC superfamily K02064 thiB; thiamine transport system substrate-binding protein
D Dda3937_01358 thiP; membrane component of thiamin ABC transporter K02063 thiP; thiamine transport system permease protein
D Dda3937_01359 thiQ; thiamin transporter subunit; ATP-binding component of ABC superfamily K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D Dda3937_03477 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D Dda3937_03474 potI; putrescine transporter subunit: membrane component of ABC superfamily K11074 potI; putrescine transport system permease protein
D Dda3937_03475 potH; putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein
D Dda3937_03476 potG; putrescine transporter subunit: ATP-binding component of ABC superfamily K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Dda3937_04080 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Dda3937_00641 ABC transpoter ATP binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Dda3937_01640 Possible ABC transporter, periplasmic substrate X binding protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Dda3937_00639 ABC transporter membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Dda3937_01639 Putative ABC transporter of substrate X, permease subunit II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Dda3937_04077 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Dda3937_00640 ABC transporter permease membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Dda3937_01638 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Dda3937_04078 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Dda3937_04148 ydcT; ABC transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Dda3937_04076 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Dda3937_01637 Putative ABC transporter of substrate X, ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Dda3937_00899 proX; glycine betaine transporter subunit; periplasmic-binding component of ABC superfamily K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Dda3937_00900 proW; glycine betaine transporter subunit; membrane component of ABC superfamily K02001 proW; glycine betaine/proline transport system permease protein
D Dda3937_00901 proV; Glycine/Betaine L-Proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Dda3937_01664 Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Dda3937_00997 Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Dda3937_00768 ABC transporter nitrate permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Dda3937_01663 Urea carboxylase-related ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Dda3937_00998 tauC; Urea carboxylase-related ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Dda3937_00769 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Dda3937_01662 tauB; Urea carboxylase-related ABC transporter, ATPase protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Dda3937_00999 Urea carboxylase-related ABC transporter, ATPase protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Dda3937_03079 Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_01009 malK; Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_02388 ganK; ATP-binding component of transport system for galactan K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_01454 Maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_02389 ganE; periplasmic binding protein of galactan transport system K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Dda3937_02390 ganF; galactan ABC transport system, permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dda3937_02391 ganG; galactan ABC transport system, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dda3937_00599 araF; periplasmic-binding component of an ABC superfamily L-arabinose transporter K10537 araF; L-arabinose transport system substrate-binding protein
D Dda3937_00601 araH; membrane component of an ABC superfamily L-arabinose transporter K10538 araH; L-arabinose transport system permease protein
D Dda3937_00600 araG; ATP-binding component of an ABC superfamily L-arabinose transporter K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D Dda3937_04596 togB; Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component K10192 togB; oligogalacturonide transport system substrate-binding protein
D Dda3937_00207 Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component K10192 togB; oligogalacturonide transport system substrate-binding protein
D Dda3937_03360 togM; oligogalacturonide ABC transporter, permease component K10193 togM; oligogalacturonide transport system permease protein
D Dda3937_04711 togN; oligogalacturonide ABC transporter, permease component K10194 togN; oligogalacturonide transport system permease protein
D Dda3937_04712 togA; oligogalacturonide ABC transporter, ATPase component K10195 togA; oligogalacturonide transport system ATP-binding protein
D Dda3937_01005 Multiple sugar-binding protein precursor K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D Dda3937_03082 N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D Dda3937_01004 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_03078 ABC transporter, membrane spanning protein K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_03077 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_01003 Sugar ABC transporter, sugar permease protein 2 USSDB1D K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D Dda3937_02518 mglB; galactose-binding transport protein; receptor for galactose taxis K10540 mglB; methyl-galactoside transport system substrate-binding protein
D Dda3937_02520 mglC; galactoside transport system permease protein K10541 mglC; methyl-galactoside transport system permease protein
D Dda3937_02519 mglA; ATPase of galactose transport system K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D Dda3937_00984 xylF; D-xylose transport protein (XylF) K10543 xylF; D-xylose transport system substrate-binding protein
D Dda3937_00982 xylH; Xylose ABC transporter, permease protein xylH K10544 xylH; D-xylose transport system permease protein
D Dda3937_00983 xylG; D-xylose transport ATP-binding protein xylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Dda3937_02358 rbsB; periplasmic-binding component of an ABC superfamily D-ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D Dda3937_02357 rbsC; D-ribose transporter subunit; membrane component of ABC superfamily K10440 rbsC; ribose transport system permease protein
D Dda3937_02356 rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Dda3937_03167 ytfQ; ABC transporter periplasmic binding protein ytfQ precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Dda3937_03170 yjfF; ABC transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D Dda3937_03169 ytfT; ABC transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D Dda3937_03168 ytfR; Hypothetical ABC transporter ATP-binding protein ytfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Dda3937_01336 periplasmic binding protein of an ABC transporter K17202 eryG; erythritol transport system substrate-binding protein
D Dda3937_01339 membrane component of an ABC transporter K17203 eryF; erythritol transport system permease protein
D Dda3937_01338 ATP-binding component of an ABC transporter K17204 eryE; erythritol transport system ATP-binding protein
D Dda3937_01204 sugar-binding periplasmic protein K17208 ibpA; inositol transport system substrate-binding protein
D Dda3937_01206 sugar ABC transporter, permease protein K17209 iatP; inositol transport system permease protein
D Dda3937_01205 sugar transport ATP-binding protein, ABC transporter K17210 iatA; inositol transport system ATP-binding protein
D Dda3937_01150 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Dda3937_01151 Sugar ABC transporter, permease protein K17238 inoF; inositol-phosphate transport system permease protein
D Dda3937_01152 Sugar ABC transporter, permease protein K17239 inoG; inositol-phosphate transport system permease protein
D Dda3937_01153 Maltose/maltodextrin transport ATP-binding protein MalK K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Dda3937_02029 ugpB; periplasmic binding protein of sn-glycerol 3-phosphate transport system K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Dda3937_02271 ABC transporter, periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Dda3937_04431 ugpA; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_02267 sugar ABC transport system, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_03043 ugpE; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_02268 Inner membrane component of binding-protein-dependent transport system K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Dda3937_03044 ugpC; glycerol-3-phosphate transporter subunit; ATP-binding component of ABC superfamily K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Dda3937_02270 Probable sugar ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Dda3937_00691 yrbD; predicted ABC-type organic solvent transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Dda3937_00690 yrbE; predicted toluene transporter subunit: membrane component of ABC superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Dda3937_00689 yrbF; predicted toluene transporter subunit: ATP-binding component of ABC superfamily K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Dda3937_00692 yrbC; predicted ABC-type organic solvent transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D Dda3937_00693 yrbB; predicted protein K07122 mlaB; phospholipid transport system transporter-binding protein
D Dda3937_01457 lfbB; Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dda3937_01141 probable solute binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dda3937_01456 ABC-type sugar transport systems, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dda3937_01139 ABC transporter, inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dda3937_01455 Maltose/maltodextrin ABC transporter, permease protein MalG K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dda3937_01140 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dda3937_03937 putative sugar ABC transporter K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Dda3937_03611 Ribose transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D Dda3937_03610 sugar transport ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dda3937_01941 phosphate-binding protein of an ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D Dda3937_01097 pstS; phosphate transporter subunit; periplasmic-binding component of ABC superfamily K02040 pstS; phosphate transport system substrate-binding protein
D Dda3937_01690 pstC; phosphate ABC transporter, permease component K02037 pstC; phosphate transport system permease protein
D Dda3937_01096 pstC; phosphate transporter subunit; membrane component of ABC superfamily K02037 pstC; phosphate transport system permease protein
D Dda3937_01689 pstA; phosphate ABC transporter, permease component K02038 pstA; phosphate transport system permease protein
D Dda3937_01095 pstA; phosphate transporter subunit; membrane component of ABC superfamily K02038 pstA; phosphate transport system permease protein
D Dda3937_01688 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Dda3937_01094 pstB; phosphate transporter subunit; ATP-binding component of ABC superfamily K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Dda3937_04100 phosphonate ABC transporter, periplasmic component PhnD K02044 phnD; phosphonate transport system substrate-binding protein
D Dda3937_04101 phnE; phosphonate ABC transporter, permease component PhnE K02042 phnE; phosphonate transport system permease protein
D Dda3937_04102 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D Dda3937_04099 phnC; ATP-binding component of ABC phosphonate transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Dda3937_01856 Lysine-arginine-ornithine-binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Dda3937_01217 Histidine-binding periplasmic protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D Dda3937_04215 hisM; histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily K10015 hisM; histidine transport system permease protein
D Dda3937_00103 hisQ; histidine/lysine/arginine/ornithine transporter subunit; membrane component of ABC superfamily K10016 hisQ; histidine transport system permease protein
D Dda3937_04214 hisP; histidine/lysine/arginine/ornithine transporter subunit; ATP-binding component of ABC superfamily K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_00102 hisJ; periplasmic-binding component of an ABC superfamily histidine/lysine/arginine/ornithine transporter K10014 hisJ; histidine transport system substrate-binding protein
D Dda3937_02885 glnH; glutamine transporter subunit; periplasmic binding component of ABC superfamily K10036 glnH; glutamine transport system substrate-binding protein
D Dda3937_02886 glnP; glutamine transporter subunit; membrane component of ABC superfamily K10037 glnP; glutamine transport system permease protein
D Dda3937_02887 glnQ; glutamine transporter subunit; ATP-binding component of ABC superfamily K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_04325 artJ; Arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein
D Dda3937_00469 artI; periplasmic-binding component of an ABC superfamily arginine transporter K09997 artI; arginine transport system substrate-binding protein
D Dda3937_00467 artM; arginine transporter subunit; membrane component of ABC superfamily K09998 artM; arginine transport system permease protein
D Dda3937_00468 artQ; arginine transporter subunit; membrane component of ABC superfamily K09999 artQ; arginine transport system permease protein
D Dda3937_02373 artP; arginine transporter subunit; ATP-binding component of ABC superfamily K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_02472 gltI; periplasmic-binding component of an ABC superfamily glutamate/aspartate transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Dda3937_02474 gltK; membrane component of an ABC superfamily glutamate/aspartate transporter K10002 gltK; glutamate/aspartate transport system permease protein
D Dda3937_02473 gltJ; membrane component of an ABC superfamily glutamate and aspartate transporter K10003 gltJ; glutamate/aspartate transport system permease protein
D Dda3937_02475 gltL; ATP-binding component of an ABC superfamily glutamate/aspartate transporter K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_01671 ABC transporter, periplasmic binding-protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D Dda3937_01669 Octopine transport system permease protein occM K10019 occM; octopine/nopaline transport system permease protein
D Dda3937_01670 Octopine transport system permease protein occQ K10020 occQ; octopine/nopaline transport system permease protein
D Dda3937_01668 ATP-binding component of histidine transport K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_01578 yhdW; Amino acid ABC transporter, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Dda3937_01577 yhdX; Putative transport system permease protein K09970 aapQ; general L-amino acid transport system permease protein
D Dda3937_01576 yhdY; membrane component of an ABC superfamily predicted amino-acid transporter K09971 aapM; general L-amino acid transport system permease protein
D Dda3937_01575 yhdZ; Hypothetical amino-acid ABC transporter ATP-binding protein yhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_01581 fliY; cystine transporter subunit; periplasmic-binding component of ABC superfamily K02424 tcyA; L-cystine transport system substrate-binding protein
D Dda3937_01580 yecS; predicted transporter subunit: membrane component of ABC superfamily K10009 tcyB; L-cystine transport system permease protein
D Dda3937_02017 livK; high-affinity leucine-specific ABC transport system; periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dda3937_01372 branched-chain amino-acid ABC transporter periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dda3937_02018 livH; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01997 livH; branched-chain amino acid transport system permease protein
D Dda3937_01371 branched-chain amino-acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D Dda3937_02019 livM; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01998 livM; branched-chain amino acid transport system permease protein
D Dda3937_01370 branched-chain amino-acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D Dda3937_02020 livG; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dda3937_01369 branched-chain amino-acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dda3937_02021 livF; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dda3937_01368 branched-chain amino-acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dda3937_03010 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D Dda3937_03491 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D Dda3937_03915 metQ; receptor component of DL-methionine uptake transporter (MUT) K02073 metQ; D-methionine transport system substrate-binding protein
D Dda3937_03008 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D Dda3937_03489 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D Dda3937_03916 metI; membrane component of DL-methionine uptake transporter (MUT) K02072 metI; D-methionine transport system permease protein
D Dda3937_03490 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D Dda3937_03009 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D Dda3937_03917 metN; ATP-binding component of DL-methionine uptake transporter (MUT) K02071 metN; D-methionine transport system ATP-binding protein
D Dda3937_00286 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D Dda3937_00287 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D Dda3937_00288 predicted transporter subunit: ATP-binding component of ABC superfamily K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D Dda3937_00455 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_01092 Cystine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_00653 amino acid ABC transporter periplasmic binding protein (precursor) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_00456 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_00913 Putative amino acid ABC transporter, periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_02805 Putative periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_04495 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_00627 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dda3937_01796 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00629 ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00458 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00630 ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00644 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00645 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_02804 Glutamine transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_02802 Cystine transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00915 Putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00914 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_01090 ABC transport system, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_01091 putative ABC transporter membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dda3937_00643 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_00631 Putative ABC transport ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_02803 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_00459 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_00916 amino acid ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dda3937_04054 oppA; oligopeptide transport; periplasmic binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_03136 mppA; ABC transporter, periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04040 ABC transporter, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D Dda3937_04053 oppB; oligopeptide transporter subunit; membrane component of ABC superfamily K15581 oppB; oligopeptide transport system permease protein
D Dda3937_04052 oppC; oligopeptide transport system permease OppC K15582 oppC; oligopeptide transport system permease protein
D Dda3937_04051 oppD; oligopeptide transporter subunit; ATP-binding component of ABC superfamily K15583 oppD; oligopeptide transport system ATP-binding protein
D Dda3937_04050 oppF; oligopeptide transport protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Dda3937_02540 dppA; dipeptide ABC transporter, periplasmic component K12368 dppA; dipeptide transport system substrate-binding protein
D Dda3937_02905 dipeptide binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D Dda3937_02541 dppB; dipeptide transporter; membrane component of ABC superfamily K12369 dppB; dipeptide transport system permease protein
D Dda3937_02542 dppC; dipeptide transporter; membrane component of ABC superfamily K12370 dppC; dipeptide transport system permease protein
D Dda3937_02543 dppD; dipeptide transporter; ATP-binding component of ABC superfamily K12371 dppD; dipeptide transport system ATP-binding protein
D Dda3937_01979 dppF; dipeptide transporter; ATP-binding component of ABC superfamily K12372 dppF; dipeptide transport system ATP-binding protein
D Dda3937_03113 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D Dda3937_03112 sapB; predicted antimicrobial peptide transporter subunit; membrane component of ABC superfamily K19227 sapB; cationic peptide transport system permease protein
D Dda3937_03111 sapC; predicted antimicrobial peptide transporter subunit; membrane component of ABC superfamily K19228 sapC; cationic peptide transport system permease protein
D Dda3937_03110 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D Dda3937_03109 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D Dda3937_00762 periplasmic binding protein for nickel K15584 nikA; nickel transport system substrate-binding protein
D Dda3937_00761 Nickel transport system permease protein K15585 nikB; nickel transport system permease protein
D Dda3937_00760 nickel ABC transporter, inner membrane component K15586 nikC; nickel transport system permease protein
D Dda3937_00759 Oligopeptide transporter putative ATPase domain protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Dda3937_00758 ATP-binding protein of nickel transport system K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Dda3937_03251 yliB; ABC transporter, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein
D Dda3937_03250 yliC; Dipeptide transport system permease protein K13890 gsiC; glutathione transport system permease protein
D Dda3937_03249 yliD; ABC transporter, permease component K13891 gsiD; glutathione transport system permease protein
D Dda3937_03252 ABC transporter K13892 gsiA; glutathione transport system ATP-binding protein
D Dda3937_03326 putative solute-binding lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_02915 opine transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03438 oligopeptide transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_02998 Probable periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_00835 yddS; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_00111 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03607 ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_01275 ABC transporter, periplasmic binding-protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03671 ABC-type transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_01346 periplasmic binding protein of an ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03184 ABC transport protein, solute binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_01019 ABC-type transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03239 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dda3937_03439 oligopeptide transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_02994 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_02912 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_00839 ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_00115 Putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03608 D-ala-D-ala transporter subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_01276 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03672 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_01347 permease of an ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03185 ABC transport protein inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_01020 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03240 Dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_03325 putative transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dda3937_02993 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_02911 opine transporter, membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_00838 ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_00114 Dipeptide transport system permease protein dppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03609 yddQ; dipeptide transport protein (ABC superfamily, membrane) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01277 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03673 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01348 permease of an ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03186 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01021 Membrane component, ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_03241 Dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01248 Oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dda3937_01022 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01349 ATP-binding protein of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01247 ABC transporter, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_02992 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01278 Peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03328 ABC transporter, nucleotide binding/ATPase protein (peptide) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01163 peptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_00837 Oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03187 Peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_00113 Dipeptide transport ATP-binding protein dppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03674 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_02914 opine transporter, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_03242 Oligopeptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dda3937_01246 oligopeptide ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_01164 peptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_03327 ABC transporter, nucleotide binding/ATPase protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_00836 Peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_02913 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_01350 ATP-binding protein of ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_00112 Putative glutathione transporter, ATP-binding component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_03243 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dda3937_03828 yejA; predicted oligopeptide transporter subunit; periplasmic-binding component of ABC superfamily K13893 yejA; microcin C transport system substrate-binding protein
D Dda3937_03827 yejB; predicted oligopeptide transporter subunit; membrane component of ABC superfamily K13894 yejB; microcin C transport system permease protein
D Dda3937_03826 yejE; predicted oligopeptide transporter subunit; membrane component of ABC superfamily K13895 yejE; microcin C transport system permease protein
D Dda3937_03825 yejF; Putative ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D Dda3937_00505 fhuD; iron-hydroxamate transporter subunit; periplasmic-binding component of ABC superfamily K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D Dda3937_00504 fhuB; fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components K23228 fhuB; ferric hydroxamate transport system permease protein
D Dda3937_00506 fhuC; ATP-binding component of iron-hydroxamate transporter K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D Dda3937_03283 hmuT; Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D Dda3937_03284 hmuU; Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D Dda3937_00848 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D Dda3937_03032 cbuB; ferric chrysobactin binding protein;permease periplasmic component K23185 fepB; ferric enterobactin transport system substrate-binding protein
D Dda3937_03034 cbuD; ferrichrysobactin transporter; ABC permease; inner membrane component K23186 fepD; iron-siderophore transport system permease protein
D Dda3937_03035 cbuG; ferrichrysobactin transporter: ABC permease; inner membrane component K23187 fepG; iron-siderophore transport system permease protein
D Dda3937_03036 cbuC; ferrichrysobactin transporter, permease; ATPase component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D Dda3937_02848 cbrA; Siderophore staphylobactin ABC transporter, substrate-binding protein SirA K25109 sirA; iron-siderophore transport system substrate-binding protein
D Dda3937_02847 cbrB; ferric achromobactin inner membrane permease component K25110 sirB; iron-siderophore transport system permease protein
D Dda3937_02846 cbrC; ferric achromobactin inner membrane permease component K25111 sirC; iron-siderophore transport system permease protein
D Dda3937_02845 cbrD; ATP binding protein from the ferric achromobactin permease K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D Dda3937_01795 Putative solute-binding periplasmic protein of ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dda3937_02658 ABC transporter, periplasmic-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dda3937_02377 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dda3937_02380 Iron(III) dicitrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dda3937_00200 Iron-chelating periplasmic-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dda3937_02657 ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Dda3937_02378 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D Dda3937_02659 Vitamin B12 ABC transporter, ATPase component BtuD K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Dda3937_02379 ABC-type Fe3+-siderophores transport systems, ATP-binding component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Dda3937_00499 btuF; periplasmic binding component of cobalamin (vitamin B-12) transporter K06858 btuF; vitamin B12 transport system substrate-binding protein
D Dda3937_04344 btuC; vitamin B12 transporter subunit: membrane component of ABC superfamily K06073 btuC; vitamin B12 transport system permease protein
D Dda3937_03648 btuD; vitamin B12 transporter subunit : ATP-binding component of ABC superfamily K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D Dda3937_01625 znuA; Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D Dda3937_01623 znuB; high-affinity zinc transport system membrane protein K09816 znuB; zinc transport system permease protein
D Dda3937_01624 znuC; high-affinity zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Dda3937_00376 yfeA; Manganese ABC transporter, periplasmic-binding protein SitA K11604 sitA; manganese/iron transport system substrate-binding protein
D Dda3937_00374 yfeC; Manganese ABC transporter, inner membrane permease protein SitC K11605 sitC; manganese/iron transport system permease protein
D Dda3937_00373 yfeD; Manganese ABC transporter, inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D Dda3937_00375 yfeB; Manganese ABC transporter, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein
D Dda3937_04298 Zinc ABC transporter, periplasmic-binding protein ZnuA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Dda3937_03088 Zinc ABC transporter, inner membrane permease protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Dda3937_03087 Zinc ABC transporter, ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Dda3937_00445 O-antigen export system permease protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D Dda3937_00446 O-antigen export system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Dda3937_01299 yjgP; conserved inner membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D Dda3937_01300 yjgQ; conserved inner membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D Dda3937_00683 yhbG; ATP-binding component of an ABC-type LPS transporter complex K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dda3937_04009 ybhR; YbhR K25180 ybhR; drug efflux transport system permease protein
D Dda3937_04010 ybhS; hypothetical protein K25181 ybhS; drug efflux transport system permease protein
D Dda3937_04011 ybhF; ABC transporter multidrug efflux pump, fused ATP-binding domains K25182 ybhF; drug efflux transport system ATP-binding protein
D Dda3937_04012 ybhG; Hypothetical UPF0194 membrane protein ybhG K25183 ybhG; membrane fusion protein YbhG
D Dda3937_03643 lolE; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D Dda3937_03641 lolC; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D Dda3937_03642 lolD; outer membrane-specific lipoprotein transporter subunit; ATP-binding component of ABC superfamily K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Dda3937_02014 ftsX; predicted transporter subunit: membrane component of ABC superfamily K09811 ftsX; cell division transport system permease protein
D Dda3937_02013 ftsE; predicted transporter subunit: ATP-binding component of ABC superfamily K09812 ftsE; cell division transport system ATP-binding protein
D Dda3937_00518 yadH; predicted transporter subunit: membrane component of ABC superfamily K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dda3937_04074 yadG; predicted transporter subunit: ATP-binding component of ABC superfamily K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dda3937_03431 ABC transporter, ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Dda3937_01487 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Dda3937_01792 ybbP; predicted inner membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Dda3937_03430 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dda3937_01485 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dda3937_01791 ybbA; predicted transporter subunit: ATP-binding component of ABC superfamily K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dda3937_00965 untA; ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dda3937_03667 sufC; SufC protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Dda3937_00604 yfeH; predicted inner membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D Dda3937_04641 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D Dda3937_01227 cation efflux protein K26937 dinF; MATE family, multidrug efflux pump
D Dda3937_02791 yeeO; Putative inner membrane protein K26937 dinF; MATE family, multidrug efflux pump
D Dda3937_03028 rafB; Lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D Dda3937_03626 sotA; sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D Dda3937_00885 kgtP; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D Dda3937_00791 ousA; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Dda3937_00387 Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Dda3937_01657 ydfJ; Transporter, MFS superfamily K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D Dda3937_03819 yhjX; Oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Dda3937_01032 Oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Dda3937_00247 Sialic acid transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D Dda3937_00187 gudP; predicted D-glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D Dda3937_02738 exuT; hexuronate transport system K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Dda3937_03635 Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Dda3937_03804 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D Dda3937_02457 cynX; Cyanate transport protein cynX K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D Dda3937_02383 hcaT; predicted 3-phenylpropionic transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Dda3937_03547 uhpT; Hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D Dda3937_00316 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D Dda3937_03548 uhpC; membrane protein regulates uhpT expression K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D Dda3937_03788 narK; nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Dda3937_02593 ygeD; predicted inner membrane protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D Dda3937_03033 ybdA; Putative transport K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D Dda3937_01977 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Dda3937_03823 bcr; bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_00749 Probable transport transmembrane protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_00704 Multidrug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_01837 Putative membrane transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_03617 sotB; sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D Dda3937_01458 hypothetical protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_03562 yceE; hypothetical protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_01602 mdtH; predicted drug efflux system K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D Dda3937_01191 ydhP; Major facilitator family transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D Dda3937_00755 Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Dda3937_00892 emrB; Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Dda3937_01172 Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Dda3937_01325 yebQ; Putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D Dda3937_02818 yegB; Putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D Dda3937_04128 ynfM; predicted transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D Dda3937_02832 Putative permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D Dda3937_03354 ycaD; predicted transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D Dda3937_00417 yhfC; putative integral membrane protein K06141 tsgA; MFS transporter, TsgA protein
D Dda3937_03122 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Dda3937_01426 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Dda3937_00849 ptsP; PTS system nitrogen assimilation enzyme I component/putative sensory transducer K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Dda3937_01427 ptsH; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) K02784 ptsH; phosphocarrier protein HPr
D Dda3937_00678 npr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K08485 ptsO; phosphocarrier protein NPr
D Dda3937_03625 fruB; IIA and HPr components of fructose-specific PTS enzyme K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D Dda3937_01425 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Dda3937_02252 ptsG; PTS system glucose-specific IICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D Dda3937_03952 nagE; PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Dda3937_01267 scrA; PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Dda3937_03833 arbF; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D Dda3937_02589 bglF; PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D Dda3937_03623 fruA; PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Dda3937_00995 mtlA; PTS system, mannitol-specific IIC component / PTS system, mannitol-specific IIB component / PTS system, mannitol-specific IIA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D Dda3937_02579 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02404 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02582 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D Dda3937_02580 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D Dda3937_03725 manX; PTS system mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Dda3937_03726 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D Dda3937_04593 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D Dda3937_01633 sgaT; Putative integral membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D Dda3937_00680 ptsN; sugar-specific enzyme IIA component of PTS K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Dda3937_03877 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D Dda3937_03308 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D Dda3937_01237 Glutathione S-transferase, theta K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_00134 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_04603 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_00090 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_02898 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_03492 yliJ; predicted glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_02121 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Dda3937_00705 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D Dda3937_01698 yccA; Putative carrier/transport protein K19416 yccA; modulator of FtsH protease
D Dda3937_03349 focA; formate transporter K06212 focA; formate transporter
D Dda3937_01519 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D Dda3937_03297 bspB; Potassium efflux system kefA / Small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel
D Dda3937_02408 Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D Dda3937_02149 bspA; Potassium efflux system kefA / Small-conductance mechanosensitive channel K22051 mscM; miniconductance mechanosensitive channel
D Dda3937_00412 mscS; MscS family mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Dda3937_02783 motA; Flagellar motor rotation protein motA K02556 motA; chemotaxis protein MotA
D Dda3937_02782 motB; Flagellar motor rotation protein motB K02557 motB; chemotaxis protein MotB
D Dda3937_03019 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D Dda3937_01262 exbB; membrane spanning protein in TonB-ExbB-ExbD complex K03561 exbB; biopolymer transport protein ExbB
D Dda3937_01263 exbD; membrane spanning protein in TonB-ExbB-ExbD complex K03559 exbD; biopolymer transport protein ExbD
D Dda3937_03020 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Dda3937_01880 tolQ; membrane spanning protein in TolA-TolQ-TolR complex K03562 tolQ; biopolymer transport protein TolQ
D Dda3937_00557 tolR; membrane spanning protein in TolA-TolQ-TolR complex K03560 tolR; biopolymer transport protein TolR
D Dda3937_00303 corA; magnesium/nickel/cobalt transporter K03284 corA; magnesium transporter
D Dda3937_03137 ydaN; predicted Zn(II) transporter K16074 zntB; zinc transporter
D Dda3937_02492 crcB; predicted inner membrane protein associated with chromosome condensation K06199 crcB; fluoride exporter
D Dda3937_00163 ytfL; predicted inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dda3937_03661 ompF; outer membrane porin 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D Dda3937_03660 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_03657 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_02395 ganL; galactan outer membrane porin K02024 lamB; maltoporin
D Dda3937_01268 scrY; Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) K16077 scrY; sucrose porin
D Dda3937_03835 yieC; Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) K10124 bglH; carbohydrate-specific outer membrane porin
D Dda3937_02824 ompA; outer membrane protein A (3a;II*;G;d) K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Dda3937_02881 ompX; outer membrane protein K11934 ompX; outer membrane protein X
D Dda3937_00486 fadL; long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein
D Dda3937_02245 tsx; Nucleoside-specific channel-forming protein tsx precursor K05517 tsx; nucleoside-specific channel-forming protein
D Dda3937_03393 Serine protease K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D Dda3937_04300 fepA; TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins K19611 fepA; ferric enterobactin receptor
D Dda3937_03897 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter
D Dda3937_00846 TonB-dependent hemin, ferrichrome receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Dda3937_03016 sftP; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dda3937_01794 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dda3937_04467 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dda3937_03042 fct; ferrichrysobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dda3937_00199 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dda3937_02855 acr; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Dda3937_01653 prtF; outer membrane exporter of proteases K12538 hasF; outer membrane protein, type I secretion system
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_01841 Probable outer membrane multidrug efflux lipoprotein, OMF family precursor K18139 oprM; outer membrane protein, multidrug efflux system
D Dda3937_02644 Capsular polysaccharide synthesis enzyme cpsC, polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D Dda3937_03929 wza; Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Dda3937_01884 yaeT; conserved protein K07277 SAM50; outer membrane protein insertion porin family
D Dda3937_03708 yfgL; protein assembly complex, lipoprotein component K17713 bamB; outer membrane protein assembly factor BamB
D Dda3937_02506 nlpB; Lipoprotein-34 precursor K07287 bamC; outer membrane protein assembly factor BamC
D Dda3937_01571 yfiO; predicted lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D Dda3937_02548 smpA; Outer membrane lipoprotein OmlA K06186 bamE; outer membrane protein assembly factor BamE
D Dda3937_00166 ytfM; predicted outer membrane protein and surface antigen K07278 tamA; translocation and assembly module TamA
D Dda3937_00167 ytfN; conserved protein K09800 tamB; translocation and assembly module TamB
D Dda3937_03362 kdgM; oligogalacturonate specific porin K22110 kdgM; oligogalacturonate-specific porin family protein
D Dda3937_00571 kdgN; oligogalacturonate specific porin K22110 kdgM; oligogalacturonate-specific porin family protein
D Dda3937_00684 yhbN; periplasmic component of an ABC-type LPS transporter complex K09774 lptA; lipopolysaccharide export system protein LptA
D Dda3937_00685 yrbK; conserved protein K11719 lptC; lipopolysaccharide export system protein LptC
D Dda3937_01378 imp; exported protein required for envelope biosynthesis and integrity K04744 lptD; LPS-assembly protein
D Dda3937_02478 rlpB; minor lipoprotein K03643 lptE; LPS-assembly lipoprotein
D Dda3937_01992 bcsC; Cellulose synthase operon protein C precursor K20543 bcsC; cellulose synthase operon protein C
D Dda3937_02645 Capsular polysaccharide synthesis enzyme cpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D Dda3937_02470 corC; predicted ion transport K06189 corC; hemolysin (HlyC) family protein
D Dda3937_00772 Antiholin-like protein LrgA K06518 cidA; holin-like protein
D Dda3937_03744 conserved inner membrane protein K06518 cidA; holin-like protein
D Dda3937_00201 rhiT; Oligogalacturonide transporter K16210 togT; oligogalacturonide transporter
D Dda3937_01169 togT; oligogalacturonide transporter K16210 togT; oligogalacturonide transporter
D Dda3937_03618 lysP; lysine transporter K11733 lysP; lysine-specific permease
D Dda3937_04205 aroP; Aromatic amino acid transport protein aroP K11734 aroP; aromatic amino acid transport protein AroP
D Dda3937_03449 Aromatic amino acid transport protein aroP K11734 aroP; aromatic amino acid transport protein AroP
D Dda3937_01944 proY; predicted cryptic proline transporter K11736 proY; proline-specific permease ProY
D Dda3937_03962 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D Dda3937_03402 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D Dda3937_00532 yhfM; Ethanolamin permease K16238 eat; ethanolamine permease
D Dda3937_01431 yjeH; predicted transporter K16263 yjeH; amino acid efflux transporter
D Dda3937_03986 zitB; zinc efflux system K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Dda3937_03866 fieF; zinc transporter K13283 fieF; ferrous-iron efflux pump FieF
D Dda3937_03990 cusA; Cobalt-zinc-cadmium resistance protein czcA; Cation efflux system protein cusA K07787 cusA; copper/silver efflux system protein
D Dda3937_03300 acrB; multidrug efflux system protein K18138 acrB; multidrug efflux pump
D Dda3937_01840 Multidrug efflux protein K18138 acrB; multidrug efflux pump
D Dda3937_00787 RND multidrug efflux transporter; Acriflavin resistance protein K18146 adeB; multidrug efflux pump
D Dda3937_02820 yegN; Acriflavin resistance plasma membrane protein K07788 mdtB; multidrug efflux pump
D Dda3937_02819 mdtC; multidrug efflux system, subunit C K07789 mdtC; multidrug efflux pump
D Dda3937_02465 emrE; Quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D Dda3937_01554 Bacterial/Archaeal Transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Dda3937_01986 eamA; Probable amino acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter
D Dda3937_00975 pecM; signal receptor K15269 pecM; probable blue pigment (indigoidine) exporter
D Dda3937_02882 rhtA; threonine and homoserine efflux system K11939 rhtA; inner membrane transporter RhtA
D Dda3937_00305 rarD; predicted chloramphenical resistance permease K05786 rarD; chloramphenicol-sensitive protein RarD
D Dda3937_01075 Polymyxin resistance protein PmrL, sucrose-6 phosphate hydrolase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D Dda3937_00324 gntT; gluconate transporter, high-affinity GNT I system K06155 gntT; Gnt-I system high-affinity gluconate transporter
D Dda3937_03101 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D Dda3937_02717 dcuA; C4-dicarboxylate antiporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D Dda3937_02689 dcuB; C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D Dda3937_00125 yghK; L-lactate permease K03303 lutP; lactate permease
D Dda3937_04142 tehA; Tellurite resistance protein tehA K03304 tehA; tellurite resistance protein
D Dda3937_00118 chaA; calcium/sodium:proton antiporter K07300 chaA; Ca2+:H+ antiporter
D Dda3937_00688 yrbG; predicted calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D Dda3937_01159 pitA; low-affinity phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D Dda3937_01598 panF; pantothenate:sodium symporter K14392 panF; sodium/pantothenate symporter
D Dda3937_00257 putP; proline:sodium symporter K11928 putP; sodium/proline symporter
D Dda3937_02261 actP; acetate permease K14393 actP; cation/acetate symporter
D Dda3937_04118 gltP; proton glutamate symport protein K11102 gltP; proton glutamate symport protein
D Dda3937_01995 dctA; C4-dicarboxylic acid, orotate and citrate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Dda3937_00383 nhaA; sodium-proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D Dda3937_02262 yjcE; predicted cation/proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Dda3937_00538 kefB; Glutathione-regulated potassium-efflux system protein kefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D Dda3937_00539 kefG; component of potassium effux complex with KefB K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D Dda3937_03285 ybaL; predicted transporter with NAD(P)-binding Rossmann-fold domain K26735 KEA4_5_6; K+:H+ antiporter
D Dda3937_02080 trkH; Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D Dda3937_01520 trkA; NAD-binding component of TrK potassium transporter K03499 trkA; trk/ktr system potassium uptake protein
D Dda3937_01412 Cytosine/purine/uracil/thiamine/allantoin permease family protein K10974 codB; cytosine permease
D Dda3937_02513 uraA; Uracil permease K02824 uraA; uracil permease
D Dda3937_01124 yicE; Xanthine permease K16345 xanP; xanthine permease XanP
D Dda3937_02263 yjcD; Xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D Dda3937_01088 yieG; Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D Dda3937_02822 nupC; Nucleoside permease nupC K11535 nupC; nucleoside transport protein
D Dda3937_01684 sdaC; predicted serine transporter K03837 sdaC; serine transporter
D Dda3937_00502 yadQ; H(+)/Cl(-) exchange transporter clcA K03281 clcA; chloride channel protein, CIC family
D Dda3937_00110 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D Dda3937_01620 HoxN/HupN/NixA family nickel/cobalt transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D Dda3937_00119 ychM; predicted sulphate anion transporter K03321 TC.SULP; sulfate permease, SulP family
D Dda3937_04481 mntH; proton-dependent divalent metal cation transporter K03322 mntH; manganese transport protein
D Dda3937_02133 yjbB; Sodium-dependent phosphate transporter K03324 yjbB; phosphate:Na+ symporter
D Dda3937_01143 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D Dda3937_00274 wzxE; lipid III translocase K16693 wzxE; enterobacterial common antigen flippase
D Dda3937_01605 mviN; predicted inner membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D Dda3937_00369 putative receptor protein K13936 mdcF; malonate transporter and related proteins
D Dda3937_03046 Transporter K13936 mdcF; malonate transporter and related proteins
D Dda3937_00159 trkD; potassium transporter K03549 kup; KUP system potassium uptake protein
D Dda3937_03862 Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein
D Dda3937_01323 argO; arginine transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D Dda3937_02286 Putative threonine efflux protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D Dda3937_00312 rhtB; Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D Dda3937_00674 Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D Dda3937_00309 rhtC; Threonine efflux protein K05835 rhtC; threonine efflux protein
D Dda3937_01179 Threonine efflux protein K05835 rhtC; threonine efflux protein
D Dda3937_01388 Threonine efflux protein K05835 rhtC; threonine efflux protein
D Dda3937_02118 Branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D Dda3937_00896 ygaZ; Putative amino acid transporter K26605 azlC; branched chain amino acid efflux pump
D Dda3937_02119 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D Dda3937_00895 ygaH; Putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D Dda3937_02113 Tricarboxylate transport membrane protein tctA K07793 tctA; putative tricarboxylic transport membrane protein
D Dda3937_02112 transport of tricarboxylates K07794 tctB; putative tricarboxylic transport membrane protein
D Dda3937_02111 transport of tricarboxylates K07795 tctC; putative tricarboxylic transport membrane protein
D Dda3937_00672 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D Dda3937_01463 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D Dda3937_02006 yhhQ; conserved inner membrane protein K09125 yhhQ; queuosine precursor transporter
D Dda3937_02439 ftsW; cell division membrane protein K03588 ftsW; cell division protein FtsW
D Dda3937_04594 yebN; conserved inner membrane protein K23242 mntP; manganese efflux pump family protein
D Dda3937_00794 ferrous iron permease K07243 FTR; high-affinity iron transporter
D Dda3937_00793 efeO; component of a tripartite ferrous iron transporter K07224 efeO; iron uptake system component EfeO
D Dda3937_00792 efeB; redox component of a tripartite ferrous iron transporter K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D Dda3937_00978 yohM; hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D Dda3937_02381 putative membrane protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D Dda3937_03179 yjiY; Carbon starvation protein A K23676 btsT; pyruvate/proton symporter
D Dda3937_03018 tonB; Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D Dda3937_00565 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D Dda3937_00559 pal; peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Dda3937_00556 tolA; membrane anchored protein in TolA-TolQ-TolR complex K03646 tolA; colicin import membrane protein
D Dda3937_04502 tolB; periplasmic protein K03641 tolB; TolB protein
D Dda3937_02983 Malonate decarboxylase alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D Dda3937_00366 Malonate decarboxylase delta subunit K13931 mdcC; malonate decarboxylase delta subunit
D Dda3937_03791 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03792 narH; nitrate reductase 1, beta (Fe-S) subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_03794 narI; nitrate reductase 1, gamma (cytochrome b(NR)) subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Dda3937_02963 fdnG; formate dehydrogenase-N, alpha subunit, nitrate-inducible K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D Dda3937_02962 fdnH; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible K08349 fdnH; formate dehydrogenase-N, beta subunit
D Dda3937_02961 fdnI; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible K08350 fdnI; formate dehydrogenase-N, gamma subunit
D Dda3937_00756 Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D Dda3937_01173 Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D Dda3937_00893 emrA; Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D Dda3937_01652 prtE; Proteases secretion protein prtE K12537 hasE; membrane fusion protein, type I secretion system
D Dda3937_03991 cusB; Probable Co/Zn/Cd efflux system membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D Dda3937_03859 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D Dda3937_01839 Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03299 acrA; Acriflavin resistance protein A; Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_04001 ybhT; Putative membrane protein K25859 acrZ; accessory protein, multidrug efflux pump
D Dda3937_00786 Probable RND efflux membrane fusion protein K18145 adeA; membrane fusion protein, multidrug efflux system
D Dda3937_02821 mdtA; multidrug efflux system, subunit A K07799 mdtA; membrane fusion protein, multidrug efflux system
D Dda3937_01420 macA; macrolide-specific efflux protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D Dda3937_00671 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D Dda3937_02643 Capsular polysaccharide synthesis enzyme cpsD, exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Dda3937_03927 wzc; Tyrosine-protein kinase wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Dda3937_03985 pnuC; predicted nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D Dda3937_02095 feoA; Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D Dda3937_02096 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D Dda3937_02094 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Dda3937_00623 sbmA; SbmA protein K17938 sbmA; peptide/bleomycin uptake transporter
D Dda3937_01160 uspB; universal stress protein B K06144 uspB; universal stress protein B
D Dda3937_02595 ecnA; Entericidin A precursor K16347 ecnA; entericidin A
D Dda3937_02652 yedX; Transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Dda3937_00085 Copper resistance protein D K07245 pcoD; copper resistance protein D
D Dda3937_03566 yobA; Protein yobA precursor K07156 copC; copper resistance protein C
D Dda3937_03332 mipA; scaffolding protein for murein synthesizing machinery K07274 mipA; MipA family protein
D Dda3937_01470 Probable cog3713, mipa like outer membrane v transmembrane protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:ddd02044]
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_01651 prtD; Alkaline protease secretion ATP-binding protein aprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Dda3937_01652 prtE; Proteases secretion protein prtE K12537 hasE; membrane fusion protein, type I secretion system
D Dda3937_01653 prtF; outer membrane exporter of proteases K12538 hasF; outer membrane protein, type I secretion system
D Dda3937_03386 Toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Dda3937_03859 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D Dda3937_02412 outB; General secretion pathway protein B K02451 gspB; general secretion pathway protein B
D Dda3937_02414 outC; General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D Dda3937_03838 sttD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Dda3937_02415 outD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D Dda3937_04615 sttE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Dda3937_02416 outE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Dda3937_04115 sttF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Dda3937_02417 outF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Dda3937_04114 sttG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Dda3937_02418 outG; Type II secretory pathway, component OutG K02456 gspG; general secretion pathway protein G
D Dda3937_02419 outH; Type II secretory pathway, component OutH K02457 gspH; general secretion pathway protein H
D Dda3937_04113 sttI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D Dda3937_02420 outI; Type II secretory pathway, component OutI K02458 gspI; general secretion pathway protein I
D Dda3937_04112 sttJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D Dda3937_02421 outJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D Dda3937_04111 sttK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Dda3937_02422 outK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Dda3937_02423 outL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D Dda3937_02424 outM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D Dda3937_02425 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D Dda3937_02411 outS; OutS lipoprotein precursor K02465 gspS; general secretion pathway protein S
D Dda3937_03703 Putative fimbrial biogenesis protein precursor K02656 pilF; type IV pilus assembly protein PilF
D Dda3937_02602 yggR; predicted transporter K02669 pilT; twitching motility protein PilT
D Dda3937_00852 ppdA; Prepilin peptidase dependent protein A K02679 ppdA; prepilin peptidase dependent protein A
D Dda3937_00853 ppdB; Prepilin peptidase dependent protein B precursor K02680 ppdB; prepilin peptidase dependent protein B
D Dda3937_00855 ppdC; Putative prepilin peptidase dependent protein K02681 ppdC; prepilin peptidase dependent protein C
D Dda3937_02243 ppdD; predicted major pilin subunit K02682 ppdD; prepilin peptidase dependent protein D
D Dda3937_02242 hofB; conserved protein with nucleoside triphosphate hydrolase domain K02504 hofB; protein transport protein HofB
D Dda3937_02241 hofC; Type 4 fimbrial assembly protein pilC K02505 hofC; protein transport protein HofC
D Dda3937_00074 Type IV pilus biogenesis protein PilM K12288 hofM; pilus assembly protein HofM
D Dda3937_00075 Type IV pilus biogenesis protein PilN K12289 hofN; pilus assembly protein HofN
D Dda3937_04180 Inner membrane protein K12291 hofP; pilus assembly protein HofP
D Dda3937_04181 hofQ; predicted fimbrial transporter K02507 hofQ; protein transport protein HofQ
D Dda3937_02599 yggT; predicted inner membrane protein K02221 yggT; YggT family protein
D Dda3937_03315 ybaV; Putative exported protein K02237 comEA; competence protein ComEA
D Dda3937_04208 hrcC; Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) K03219 yscC; type III secretion protein C
D Dda3937_00610 hrpQ; HrpQ K03220 yscD; type III secretion protein D
D Dda3937_03342 hrcJ; Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D Dda3937_03340 hrpE; HrpE K03223 yscL; type III secretion protein L
D Dda3937_00611 hrcN; type III secretory pathway, ATPase component HrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D Dda3937_00614 hrcQ; HrcQ K03225 yscQ; type III secretion protein Q
D Dda3937_00615 hrcR; type III secretion inner membrane protein K03226 yscR; type III secretion protein R
D Dda3937_00616 hrcS; type III secretion inner membrane protein K03227 yscS; type III secretion protein S
D Dda3937_00617 hrcT; type III secretion inner membrane protein K03228 yscT; type III secretion protein T
D Dda3937_00618 hrcU; type III secretion inner membrane protein K03229 yscU; type III secretion protein U
D Dda3937_00609 hrcV; Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) K03230 yscV; type III secretion protein V
D Dda3937_00608 hrpJ; type III secretion protein K04058 yscW; type III secretion protein W
D Dda3937_03965 flhA; predicted flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D Dda3937_02774 flhB; Flagellar biosynthesis protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D Dda3937_02226 fliF; Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D Dda3937_02224 fliH; Flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH
D Dda3937_02223 fliI; Flagellum-specific ATP synthase fliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Dda3937_02218 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN
D Dda3937_02217 fliO; Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D Dda3937_02216 fliP; Flagellar biosynthesis protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D Dda3937_02215 fliQ; Flagellar biosynthesis protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Dda3937_02214 fliR; Flagellar biosynthesis protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D Dda3937_02755 virB1; VirB1 K03194 virB1; type IV secretion system protein VirB1
D Dda3937_02754 virB2; Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
D Dda3937_02753 virB4; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D Dda3937_02752 virB5; Minor pilin of type IV secretion complex (VirB5) K03200 virB5; type IV secretion system protein VirB5
D Dda3937_02750 virB6; Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
D Dda3937_02748 virB8; Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D Dda3937_02747 virB9; VirB9 K03204 virB9; type IV secretion system protein VirB9
D Dda3937_02746 virB10; Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D Dda3937_02745 virB11; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D Dda3937_01736 TRAG protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Dda3937_02295 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Dda3937_01738 Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D Dda3937_01739 Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D Dda3937_01740 Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D Dda3937_01741 Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D Dda3937_01744 Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D Dda3937_01745 Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D Dda3937_03593 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D Dda3937_01746 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D Dda3937_01742 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D Dda3937_01743 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D Dda3937_03393 Serine protease K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D Dda3937_00804 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D Dda3937_00809 Chemotaxis motB protein K11892 impK; type VI secretion system protein ImpK
D Dda3937_00810 ImpJ K11893 impJ; type VI secretion system protein ImpJ
D Dda3937_00813 SciB protein K11895 impH; type VI secretion system protein ImpH
D Dda3937_00814 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D Dda3937_00816 SciI protein K11900 impC; type VI secretion system protein ImpC
D Dda3937_00817 ImpB K11901 impB; type VI secretion system protein ImpB
D Dda3937_00833 hcpB; Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D Dda3937_01761 hcpA; Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D Dda3937_02770 Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D Dda3937_00832 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Dda3937_01760 Putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D Dda3937_02771 Putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D Dda3937_00815 hypothetical protein K11905 K11905; type VI secretion system protein
D Dda3937_00811 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D Dda3937_00808 ClpB protein K11907 vasG; type VI secretion system protein VasG
D Dda3937_00805 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D Dda3937_00803 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D Dda3937_00812 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D Dda3937_00806 hypothetical protein K11909 vasI; type VI secretion system protein VasI
D Dda3937_02235 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dda3937_02047 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D Dda3937_01950 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D Dda3937_00215 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D Dda3937_01951 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D Dda3937_02344 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D Dda3937_02234 secM; regulator of secA translation K13301 secM; secretion monitor
D Dda3937_01511 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D Dda3937_03944 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dda3937_02012 ftsY; signal recognition particle (SRP) receptor K03110 ftsY; fused signal recognition particle receptor
D Dda3937_01949 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D Dda3937_01063 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dda3937_02065 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D Dda3937_02066 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Dda3937_02067 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D Dda3937_02490 tatE; Twin-arginine translocation protein TatE K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:ddd02042]
D Dda3937_00163 ytfL; predicted inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dda3937_02303 yqfA; predicted oxidoreductase, inner membrane subunit K11068 hlyIII; hemolysin III
D Dda3937_02289 Phospholipase C 4 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:ddd02022]
D Dda3937_01940 phoR; sensory histidine kinase in two-component regulatory system with PhoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Dda3937_01939 phoB; DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Dda3937_02089 phoQ; sensory histidine kinase in two-compoent regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Dda3937_02088 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Dda3937_00355 envZ; sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Dda3937_00354 ompR; DNA-binding response regulator in two-component regulatory system with EnvZ K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Dda3937_00122 rstB; Sensor protein rstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D Dda3937_00121 rstA; DNA-binding response regulator in two-component regulatory system with RstB K07661 rstA; two-component system, OmpR family, response regulator RstA
D Dda3937_03052 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D Dda3937_03053 cpxR; Transcriptional regulatory protein cpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D Dda3937_02817 baeS; sensory histidine kinase in two-component regulatory system with BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Dda3937_02816 baeR; DNA-binding response regulator in two-component regulatory system with BaeS K07664 baeR; two-component system, OmpR family, response regulator BaeR
D Dda3937_00527 pmrB; sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D Dda3937_00526 pmrA; Response regulator of the two-component transcriptional regulatory system (PmrA-PmrB BasR-BasS) K07771 basR; two-component system, OmpR family, response regulator BasR
D Dda3937_00229 Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_02279 Sensor protein irlS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_00228 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dda3937_02280 Two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dda3937_01552 kdpD; sensory histidine kinase in two-component regulatory system with KdpE K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dda3937_01553 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Dda3937_00396 arcA; DNA-binding response regulator in two-component regulatory system with ArcB or CpxA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D Dda3937_02109 tctE; Sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D Dda3937_02110 tctD; Transcriptional regulatory protein tctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D Dda3937_00784 Two-component hybrid sensor and regulator K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Dda3937_00785 Phosphate regulon transcriptional regulatory protein phoB K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Dda3937_01422 Putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Dda3937_01421 Putative two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D Dda3937_03787 narX; sensory histidine kinase in two-component regulatory system with NarL K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Dda3937_03786 narL; DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dda3937_03549 uhpB; Sensor protein uhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Dda3937_03550 uhpA; DNA-binding response regulator in two-component regulatory system wtih UhpB K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D Dda3937_01775 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D Dda3937_01777 yojN; Putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D Dda3937_01776 rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and YojN K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D Dda3937_00193 barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Dda3937_03960 uvrY; Response regulator of the two-component transcriptional regulatory system UvrY-BarA (ExpA-ExpS, GacA-GacS) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Dda3937_02968 citA; sensory histidine kinase in two-component regulatory system with citB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D Dda3937_02969 citB; Response regulator of a two component transcriptional regulatory system (CitA/CitB) K07702 dpiA; two-component system, CitB family, response regulator CitB
D Dda3937_02537 dcuS; Fumarate respiration sensor kinase protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D Dda3937_02538 dcuR; Response regulator of the two component transcriptional regulatory system DcuR/DcuS K07703 dcuR; two-component system, CitB family, response regulator DcuR
D Dda3937_03817 ypdA; putative sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dda3937_03181 yehU; predicted sensory kinase in two-component system with YehT K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dda3937_00329 predicted two-component system sensory kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Dda3937_03180 yehT; predicted two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D Dda3937_03818 ypdB; Autolysin response regulator K02477 K02477; two-component system, LytTR family, response regulator
D Dda3937_01117 glnL; sensory histidine kinase in two-component regulatory system with GlnG K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Dda3937_01116 glnG; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Dda3937_03378 yfhK; Sensor histidine kinase for the two component response regulator YfhA K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Dda3937_03376 yfhA; predicted DNA-binding response regulator in two-component system K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Dda3937_02781 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Dda3937_02776 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Dda3937_02777 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dda3937_02985 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
C 02035 Bacterial motility proteins [BR:ddd02035]
D Dda3937_02781 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Dda3937_02780 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D Dda3937_02778 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Dda3937_02777 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Dda3937_02776 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Dda3937_02775 cheZ; Chemotaxis response - phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D Dda3937_02985 Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Dda3937_01934 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03899 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01559 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00072 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03501 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03500 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03499 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03498 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01162 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02023 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02025 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02026 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02027 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02872 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02184 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00027 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_03462 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_01861 Probable methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02635 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_02614 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Dda3937_00563 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02779 cheD; Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00105 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_01293 Methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02163 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00170 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_02606 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Dda3937_00625 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_00626 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_03778 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_00992 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_01632 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_02970 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_03142 Methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D Dda3937_02665 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_02787 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_00404 chmX; Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D Dda3937_00107 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D Dda3937_00184 Aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D Dda3937_02224 fliH; Flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH
D Dda3937_02223 fliI; Flagellum-specific ATP synthase fliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Dda3937_02222 fliJ; Flagellar protein fliJ K02413 fliJ; flagellar protein FliJ
D Dda3937_02217 fliO; Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D Dda3937_02216 fliP; Flagellar biosynthesis protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D Dda3937_02215 fliQ; Flagellar biosynthesis protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Dda3937_02214 fliR; Flagellar biosynthesis protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D Dda3937_03965 flhA; predicted flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D Dda3937_02774 flhB; Flagellar biosynthesis protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D Dda3937_02663 Flagellar protein flhE K03516 flhE; flagellar protein FlhE
D Dda3937_03966 flhE; conserved protein K03516 flhE; flagellar protein FlhE
D Dda3937_02225 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D Dda3937_02219 fliM; Flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D Dda3937_02218 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN
D Dda3937_02226 fliF; Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D Dda3937_02210 flgI; Flagellar P-ring protein flgI K02394 flgI; flagellar P-ring protein FlgI
D Dda3937_02203 flgA; Flagellar basal-body P-ring formation protein flgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Dda3937_02209 flgH; Flagellar L-ring protein flgH K02393 flgH; flagellar L-ring protein FlgH
D Dda3937_02220 fliL; Flagellar biosynthesis protein fliL K02415 fliL; flagellar protein FliL
D Dda3937_02227 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Dda3937_02221 fliK; Flagellar hook-length control protein fliK K02414 fliK; flagellar hook-length control protein FliK
D Dda3937_02204 flgB; Flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D Dda3937_04345 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D Dda3937_02205 flgD; Flagellar basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D Dda3937_02207 flgF; Flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF
D Dda3937_02208 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D Dda3937_02211 flgJ; flagellum-specific muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Dda3937_02206 flgE; Flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D Dda3937_02212 flgK; Flagellar hook-associated protein flgK K02396 flgK; flagellar hook-associated protein 1
D Dda3937_02213 flgL; Flagellar hook-associated protein flgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Dda3937_04632 flgN; Flagellar biosynthesis protein flgN K02399 flgN; flagellar biosynthesis protein FlgN
D Dda3937_03427 fliC; flagellar filament structural protein (flagellin) K02406 fliC; flagellin
D Dda3937_02230 fliD; Flagellar hook-associated protein fliD K02407 fliD; flagellar hook-associated protein 2
D Dda3937_02229 fliS; Flagellar biosynthesis protein fliS K02422 fliS; flagellar secretion chaperone FliS
D Dda3937_02228 fliT; Flagellar biosynthesis protein fliT K02423 fliT; flagellar protein FliT
D Dda3937_02785 flhD; Flagellar transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD
D Dda3937_02784 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC
D Dda3937_03418 fliA; RNA polymerase, sigma 28 (sigma F) factor K02405 fliA; RNA polymerase sigma factor FliA
D Dda3937_02783 motA; Flagellar motor rotation protein motA K02556 motA; chemotaxis protein MotA
D Dda3937_02782 motB; Flagellar motor rotation protein motB K02557 motB; chemotaxis protein MotB
D Dda3937_01581 fliY; cystine transporter subunit; periplasmic-binding component of ABC superfamily K02424 tcyA; L-cystine transport system substrate-binding protein
D Dda3937_03417 fliZ; predicted regulator of FliA activity K02425 fliZ; regulator of sigma S factor FliZ
D Dda3937_02202 flgM; Negative regulator of flagellin synthesis flgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Dda3937_02602 yggR; predicted transporter K02669 pilT; twitching motility protein PilT
D Dda3937_03703 Putative fimbrial biogenesis protein precursor K02656 pilF; type IV pilus assembly protein PilF
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ddd04812]
D Dda3937_00662 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Dda3937_02231 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D Dda3937_02435 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D Dda3937_02920 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D Dda3937_04710 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D Dda3937_02919 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D Dda3937_01749 hypothetical protein K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:ddd04147]
D Dda3937_03288 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Dda3937_00198 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dda3937_03335 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dda3937_00414 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dda3937_03576 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_04619 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dda3937_04190 ppiA; Peptidyl-prolyl cis-trans isomerase ppiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Dda3937_03238 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dda3937_01945 tsaA; Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Dda3937_02721 groL; Cpn60 chaperonin GroEL, large subunit of GroESL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dda3937_00385 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Dda3937_02136 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dda3937_00004 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Dda3937_00474 tufA; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dda3937_00214 tufB; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dda3937_02254 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Dda3937_00604 yfeH; predicted inner membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D Dda3937_02453 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dda3937_03287 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dda3937_03292 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Dda3937_04707 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dda3937_00977 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dda3937_00427 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Dda3937_03996 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dda3937_00330 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dda3937_03876 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dda3937_01340 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dda3937_01118 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dda3937_02069 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Dda3937_01069 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Dda3937_03870 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dda3937_00861 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_00407 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dda3937_00244 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dda3937_03096 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dda3937_03574 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dda3937_03871 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dda3937_03989 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dda3937_02143 blc; Outer membrane lipoprotein blc precursor K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:ddd02048]
D Dda3937_02862 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Dda3937_03458 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D Dda3937_02863 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Dda3937_02857 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Dda3937_03457 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Dda3937_02861 CRISPR-associated RecB family exonuclease Cas4b K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Dda3937_02859 CRISPR-associated protein, CT1133 family K19117 csd1; CRISPR-associated protein Csd1
D Dda3937_02860 CRISPR-associated protein, TM1801 family K19118 csd2; CRISPR-associated protein Csd2
D Dda3937_02858 CRISPR-associated protein, CT1134 family K19119 cas5d; CRISPR-associated protein Cas5d
D Dda3937_01270 Putative cytoplasmic protein K19123 casA; CRISPR system Cascade subunit CasA
D Dda3937_03456 hypothetical protein K19127 csy1; CRISPR-associated protein Csy1
D Dda3937_03455 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D Dda3937_03454 hypothetical protein K19129 csy3; CRISPR-associated protein Csy3
D Dda3937_03453 hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D Dda3937_04185 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Dda3937_01756 putative cytoplasmic protein K19048 symE; toxic protein SymE
D Dda3937_02931 hypothetical protein K19048 symE; toxic protein SymE
D Dda3937_00788 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Dda3937_01833 Conserved domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Dda3937_01065 hipA; Toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Dda3937_01066 hipB; Protein hipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Dda3937_00954 yafO; hypothetical protein K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
D Dda3937_00953 yafN; Stability protein StbD K19161 yafN; antitoxin YafN
D Dda3937_03304 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D Dda3937_03303 ybaJ; predicted protein K19162 tomB; hha toxicity modulator TomB
D Dda3937_03118 pspC; DNA-binding transcriptional activator K03973 pspC; phage shock protein C
D Dda3937_03117 pspB; psp operon regulatory protein K03970 pspB; phage shock protein B
D Dda3937_01710 Putative toxin of gyrase inhibiting toxin-antitoxin system K19163 ccdB; toxin CcdB
D Dda3937_04171 Putative toxin of gyrase inhibiting toxin-antitoxin system K19163 ccdB; toxin CcdB
D Dda3937_02708 Cytotoxic protein ccdB K19163 ccdB; toxin CcdB
D Dda3937_01876 Putative toxin of gyrase inhibiting toxin-antitoxin system K19163 ccdB; toxin CcdB
D Dda3937_04172 Putative antitoxin of gyrase inhibiting toxin-antitoxin system K19164 ccdA; antitoxin CcdA
D Dda3937_01709 Putative antitoxin of gyrase inhibiting toxin-antitoxin system K19164 ccdA; antitoxin CcdA
D Dda3937_02709 CcdA protein K19164 ccdA; antitoxin CcdA
D Dda3937_01875 Putative antitoxin of gyrase inhibiting toxin-antitoxin system K19164 ccdA; antitoxin CcdA
D Dda3937_02933 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D Dda3937_03800 Death ON curing protein K07341 doc; death on curing protein
D Dda3937_03799 putative cytoplasmic protein K19165 phd; antitoxin Phd
D Dda3937_02403 virulence associated protein C K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Dda3937_04450 yjgK; conserved protein K19334 tabA; biofilm protein TabA
D Dda3937_03556 yceP; Putative cytoplasmic protein K12148 bssS; biofilm regulator BssS
D Dda3937_03222 ycfR; Putative exported protein precursor K12151 bhsA; multiple stress resistance protein BhsA
D Dda3937_03447 putative exported protein K12151 bhsA; multiple stress resistance protein BhsA
D Dda3937_02231 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D Dda3937_00662 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Dda3937_01254 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Dda3937_01251 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Dda3937_03502 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dda3937_02300 ygfX; predicted protein K19168 cptA; toxin CptA
D Dda3937_02301 ygfY; conserved protein K09159 cptB; antitoxin CptB
D Dda3937_02172 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_04379 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dda3937_01728 hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
D Dda3937_01727 hypothetical protein K19170 dndC; DNA sulfur modification protein DndC
D Dda3937_01726 Possible ATPase involved in DNA repair K19171 dndD; DNA sulfur modification protein DndD
D Dda3937_01725 hypothetical protein K19172 dndE; DNA sulfur modification protein DndE
D Dda3937_01719 hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
D Dda3937_01720 hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:ddd04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ddd04090]
C 01504 Antimicrobial resistance genes [BR:ddd01504]
D Dda3937_01264 Uncharacterized low-complexity protein K18555 qnr; fluoroquinolone resistance protein
D Dda3937_00229 Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_02279 Sensor protein irlS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Dda3937_00228 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dda3937_02280 Two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dda3937_03194 D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03212 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03211 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Dda3937_03195 D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D Dda3937_03193 D-alanine carrier protein DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Dda3937_00956 Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D Dda3937_02089 phoQ; sensory histidine kinase in two-compoent regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Dda3937_02088 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Dda3937_01839 Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03299 acrA; Acriflavin resistance protein A; Probable RND efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D Dda3937_03300 acrB; multidrug efflux system protein K18138 acrB; multidrug efflux pump
D Dda3937_01840 Multidrug efflux protein K18138 acrB; multidrug efflux pump
D Dda3937_01841 Probable outer membrane multidrug efflux lipoprotein, OMF family precursor K18139 oprM; outer membrane protein, multidrug efflux system
D Dda3937_04160 cueR; copper responsive transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Dda3937_00784 Two-component hybrid sensor and regulator K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Dda3937_00785 Phosphate regulon transcriptional regulatory protein phoB K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Dda3937_00786 Probable RND efflux membrane fusion protein K18145 adeA; membrane fusion protein, multidrug efflux system
D Dda3937_00787 RND multidrug efflux transporter; Acriflavin resistance protein K18146 adeB; multidrug efflux pump
D Dda3937_00726 tolC; transport channel K12340 tolC; outer membrane protein
D Dda3937_01488 Outer membrane efflux family protein K12340 tolC; outer membrane protein
D Dda3937_01235 Transcriptional regulator, LysR family, in glycolate utilization operon K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Dda3937_03661 ompF; outer membrane porin 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D Dda3937_03660 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
D Dda3937_03657 Outer membrane protein F precursor K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ddd00536]
D Dda3937_04704 hemolysin/hemagglutinin-like protein K15125 fhaB; filamentous hemagglutinin
D Dda3937_02098 hecA2; Putative member of ShlA/HecA/FhaA exoprotein family K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ddd00537]
D Dda3937_03870 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dda3937_03238 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ddd03100]
D Dda3937_04279 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04248 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04251 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04669 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dda3937_04260 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04234 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04239 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04271 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04272 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dda3937_04240 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dda3937_04292 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dda3937_04291 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dda3937_04231 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dda3937_04287 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dda3937_04286 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dda3937_04346 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Dda3937_04264 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dda3937_04266 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dda3937_04263 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dda3937_04667 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04671 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04672 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04668 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dda3937_04284 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04237 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04238 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04252 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04229 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04259 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dda3937_04233 tRNA-His K14226 tRNA-His; tRNA His
D Dda3937_04247 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dda3937_04670 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dda3937_04250 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dda3937_04254 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04246 leuX; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04262 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04258 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04257 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04256 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04268 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dda3937_04278 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04674 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04673 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04285 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dda3937_04261 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04265 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04281 tRNA-Ile K14230 tRNA-Met; tRNA Met
D Dda3937_04241 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04242 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04255 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dda3937_04267 pheU; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dda3937_04273 pheV; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dda3937_04245 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dda3937_04253 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dda3937_04236 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dda3937_04269 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04282 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04249 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04274 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04289 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dda3937_04230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04243 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04227 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04244 thrW; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dda3937_04232 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Dda3937_04228 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dda3937_04288 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dda3937_04275 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04277 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04276 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04283 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04290 valV; tRNA-Val K14237 tRNA-Val; tRNA Val
D Dda3937_04660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04663 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04224 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04665 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04659 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04657 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dda3937_04655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04656 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04661 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04664 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04666 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04222 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04652 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dda3937_04223 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04651 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04658 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04662 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04226 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04225 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04654 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04653 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dda3937_04690 ffs; 4.5S RNA K01983 ffs; SRP RNA
D Dda3937_04682 rnpB; RNase P, RNA component; M1 RNA K01978 rnpB; M1 RNA
D Dda3937_04686 ssrA; 10Sa RNA (tmRNA) K15035 ssrA; transfer-messenger RNA
D Dda3937_04681 ryhA; small RNA K18504 arcZ; small regulatory RNA ArcZ
D Dda3937_04675 tke1; glmS activator sRNA K15841 glmY; small regulatory RNA GlmY
D Dda3937_04679 ryiA; regulatory sRNA K18505 glmZ; small regulatory RNA GlmZ
D Dda3937_04678 ryhB; regulatory antisense RNA K18507 ryhB; small regulatory RNA RyhB
D Dda3937_04676 sraD; MicA regulatory antisense RNA K18511 micA; small regulatory RNA MicA
D Dda3937_04688 rsmB; RsmB regulatory RNA K18515 csrB; small regulatory RNA CsrB
D Dda3937_04693 rprA; RprA RNA; positive regulatory RNA for rpoS translation K18518 rprA; small regulatory RNA RprA
D Dda3937_04687 gcvB; regulatory RNA K18521 gcvB; small regulatory RNA GcvB
D Dda3937_04677 rygA; small RNA K18522 omrA; small regulatory RNA OmrA
D Dda3937_04680 spf; Spot 42 RNA K18527 spf; small regulatory RNA Spot 42
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Dda3937_01257 dkgA; 2,5-diketo-D-gluconate reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Dda3937_01193 dkgB; Methylglyoxal reductase, acetol producing / 2,5-diketo-D-gluconic acid reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D Dda3937_02627 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D Dda3937_04555 ybdH; predicted oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D Dda3937_03493 yliI; predicted dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D Dda3937_02123 Aldehyde dehydrogenase; Probable coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D Dda3937_01901 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D Dda3937_03444 qor; quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Dda3937_01253 mdaB; Modulator of drug activity B K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D Dda3937_03148 azoR; NADH-azoreductase, FMN-dependent K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Dda3937_02398 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Dda3937_03190 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Dda3937_02655 ahpF; alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding protein K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D Dda3937_00164 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Dda3937_03336 yeaA; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Dda3937_04121 yghU; predicted glutathionylspermidine-utilizing glutathione transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Dda3937_04212 yfcG; Maleylacetoacetate isomerase / Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Dda3937_02730 yqjG; Possible glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D Dda3937_02815 Glutathione S-transferase domain protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D Dda3937_04444 yedY; predicted reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D Dda3937_03159 cybB; cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D Dda3937_02509 bcp; thiol peroxidase, thioredoxin-dependent K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Dda3937_03134 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Dda3937_02656 ahpC; alkyl hydroperoxide reductase, C22 subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Dda3937_00461 ohr; Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Dda3937_02120 Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Dda3937_01413 yfeX; conserved protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D Dda3937_00320 yhhW; predicted protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Dda3937_03368 hmp; bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D Dda3937_00086 ftnA; ferritin iron storage protein (cytoplasmic) K02217 ftnA; ferritin [EC:1.16.3.2]
D Dda3937_00009 cueO; Blue copper oxidase cueO precursor K14588 cueO; cuproxidase [EC:1.16.3.4]
D Dda3937_03874 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Dda3937_01435 ygbD; Nitric oxide reductase FlRd-NAD(+) reductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D Dda3937_02511 yfgD; predicted oxidoreductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Dda3937_01238 arsC; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Dda3937_01272 nrdG; anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Dda3937_03351 pflA; pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Dda3937_02368 hcr; HCP oxidoreductase, NADH-dependent K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D Dda3937_00727 hyfA; hydrogenase 4, 4Fe-4S subunit K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D Dda3937_00728 hyfB; hydrogenase 4, membrane subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D Dda3937_00729 hyfC; hydrogenase 4, membrane subunit K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D Dda3937_00730 hyfD; hydrogenase 4, membrane subunit K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D Dda3937_00731 hyfE; hydrogenase 4, membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D Dda3937_00732 hyfF; hydrogenase 4, membrane subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D Dda3937_00733 hyfG; hydrogenase 4, subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D Dda3937_00735 hyfI; hydrogenase 4, Fe-S subunit K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D Dda3937_00736 hyfJ; predicted processing element hydrogenase 4 K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D Dda3937_02666 Oxidoreductase, short-chain dehydrogenase/reductase family K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D Dda3937_03909 pcm; L-isoaspartate protein carboxylmethyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Dda3937_00776 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Dda3937_04104 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Dda3937_02674 tam; Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D Dda3937_01434 tehB; Tellurite resistance protein tehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D Dda3937_00371 Malonyl CoA acyl carrier protein transacylase K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D Dda3937_03637 Arylamine N-acetyltransferase 1 K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D Dda3937_02471 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Dda3937_02330 yhbS; predicted acyltransferase with acyl-CoA N-acyltransferase domain K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D Dda3937_01014 yiaC; Acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D Dda3937_01289 yjgM; Putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D Dda3937_01291 yedL; Histone acetyltransferase HPA2-like acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D Dda3937_00285 acetyltransferase, GNAT family K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-]
D Dda3937_02841 yncA; GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D Dda3937_02361 aat; leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Dda3937_00365 Triphosphoribosyl-dephospho-CoA synthetase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Dda3937_00889 yfiP; conserved protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D Dda3937_00850 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Dda3937_03545 yojL; predicted thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dda3937_03540 Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dda3937_02628 Putative inner membrane protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D Dda3937_03523 ydiA; conserved protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Dda3937_00177 glnE; glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Dda3937_02950 yddV; Putative Heme-regulated two-component response regulator K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D Dda3937_00370 Phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D Dda3937_03652 ydiU; conserved protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Dda3937_02129 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D Dda3937_01036 Probable formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Dda3937_01034 yfdW; Formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Dda3937_03040 cbsH; chrysobactin oligopeptidase CbsH K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D Dda3937_04501 ybgC; thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dda3937_00109 pphA; Serine/threonine protein phosphatase 1 K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D Dda3937_00578 yciV; conserved protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Dda3937_00490 sixA; Phosphohistidine phosphatase sixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Dda3937_03639 ycgG; Rtn protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D Dda3937_00422 nucM; nuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D Dda3937_02668 yjjV; predicted DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Dda3937_02251 ycfH; predicted metallodependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Dda3937_02068 tatD; Deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Dda3937_01557 ybfF; esterase K01175 ybfF; esterase [EC:3.1.-.-]
D Dda3937_00932 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D Dda3937_01994 celY; endoglucanase Y K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D Dda3937_02170 Phage lysozyme, putative K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D Dda3937_00262 pehW; polygalacturonase K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D Dda3937_00261 pehX; Exo-poly-alpha-D-galacturonosidase precursor K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D Dda3937_00263 pehV; Exo-poly-alpha-D-galacturonosidase precursor K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D Dda3937_02392 ganA; periplasmic 1,4-beta-endogalactanase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Dda3937_02956 xynA; xylanase K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D Dda3937_00202 rhiN; Rhamnogalacturonides degradation protein RhiN K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Dda3937_03080 lfgN; predicted glycosyl hydrolase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Dda3937_01523 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Dda3937_00843 Peptidase S33, tricorn interacting factor 1 K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D Dda3937_02491 ybeM; Putative amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Dda3937_01282 yjgF; ketoacid-binding protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dda3937_00176 ygiF; predicted adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D Dda3937_01397 yffH; GDP-mannose pyrophosphatase K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D Dda3937_04199 yceF; predicted protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D Dda3937_00158 ravA; AAA+ family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Dda3937_02427 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Dda3937_00367 Malonate decarboxylase beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D Dda3937_00368 Malonate decarboxylase gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D Dda3937_01634 Phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D Dda3937_00439 yjeF; predicted carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Dda3937_03551 pectate lyase K01732 E4.2.2.10; pectin lyase [EC:4.2.2.10]
D Dda3937_04108 pnlH; pectate lyase K01732 E4.2.2.10; pectin lyase [EC:4.2.2.10]
D Dda3937_01465 rhiE; Rhamnogalacturonate lyase precursor K18195 RGL4; rhamnogalacturonan endolyase [EC:4.2.2.23]
D Dda3937_02989 tdcB; catabolic threonine dehydratase, PLP-dependent K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D Dda3937_00865 csdA; Cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D Dda3937_02873 yiiL; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D Dda3937_00428 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Dda3937_00592 rsxD; predicted inner membrane oxidoreductase K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Dda3937_00593 rsxC; inner membrane iron-sulfur protein in SoxR-reducing complex K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Dda3937_00594 rsxB; inner membrane iron-sulfur protein in SoxR-reducing complex K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Dda3937_02650 zntA; zinc, cobalt and lead efflux system K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Dda3937_01953 mgtA; magnesium transporter K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D Dda3937_00509 sfsA; predicted DNA-binding transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A
D Dda3937_00126 ykgE; Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Dda3937_00777 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Dda3937_00778 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Dda3937_04340 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Dda3937_00779 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Dda3937_00127 ykgG; Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Dda3937_00081 hypothetical protein K20628 exlX; expansin
C 99982 Energy metabolism
D Dda3937_00989 fdhD; formate dehydrogenase formation protein K02379 fdhD; FdhD protein
D Dda3937_04163 yfaE; predicted 2Fe-2S cluster-containing protein K11107 yfaE; ferredoxin
D Dda3937_00591 rsxG; predicted oxidoreductase K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Dda3937_00590 rsxE; Electron transport complex protein rnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Dda3937_00595 rsxA; inner membrane subunit of SoxR-reducing complex K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Dda3937_00741 hydN; formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit K05796 hydN; electron transport protein HydN
D Dda3937_01086 Electron transport protein hydN K05796 hydN; electron transport protein HydN
D Dda3937_00155 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D Dda3937_02299 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D Dda3937_00734 hyfH; hydrogenase 4, Fe-S subunit K12143 hyfH; hydrogenase-4 component H
D Dda3937_03690 iscU; FeS cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Dda3937_02171 nifU; Iron-sulfur cluster assembly scaffold protein NifU K13819 K13819; NifU-like protein
D Dda3937_02182 nifQ; NifQ protein K15790 nifQ; nitrogen fixation protein NifQ
D Dda3937_02792 cybC; Soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D Dda3937_01436 norV; Anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D Dda3937_02166 nifX; Nitrogenase molybdenum-cofactor synthesis protein NifX K02596 nifX; nitrogen fixation protein NifX
D Dda3937_02158 nifT; Protein nifT K02593 nifT; nitrogen fixation protein NifT
D Dda3937_02175 nifZ; NifZ protein K02597 nifZ; nitrogen fixation protein NifZ
D Dda3937_02181 nifB; FeMo cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Dda3937_02165 nifN; Nitrogenase molybdenum-cofactor synthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Dda3937_02164 nifE; Nitrogenase molybdenum-cofactor synthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Dda3937_01560 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D Dda3937_02178 nifF; Flavodoxin K03839 fldA; flavodoxin I
D Dda3937_02174 nifW; Nitrogenase-stabilizing/protective protein nifW K02595 nifW; nitrogenase-stabilizing/protective protein
D Dda3937_01447 nrfC; NrfC protein K04014 nrfC; protein NrfC
D Dda3937_01446 nrfD; NrfD protein K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D Dda3937_03978 nrdI; protein that stimulates ribonucleotide reduction K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D Dda3937_01429 cysZ; predicted inner membrane protein K06203 cysZ; CysZ protein
D Dda3937_01893 yaeR; predicted lyase K08234 yaeR; glyoxylase I family protein
D Dda3937_03135 mpaA; murein peptide amidase A K14054 mpaA; murein peptide amidase A
D Dda3937_02601 yggS; predicted enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Dda3937_04036 yciS; conserved inner membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D Dda3937_04037 yciM; conserved protein K19804 lapB; lipopolysaccharide assembly protein B
D Dda3937_01991 bcsB; Cyclic di-GMP binding protein precursor K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D Dda3937_00290 hemY; predicted protoheme IX synthesis protein K02498 hemY; HemY protein
D Dda3937_02064 ubiB; Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D Dda3937_02063 yigP; conserved protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D Dda3937_01432 yqiC; conserved protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D Dda3937_02331 yhbT; predicted lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D Dda3937_01107 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Dda3937_00463 abgT; Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D Dda3937_01256 sufI; divisomal assembly stabilization protein K04753 sufI; suppressor of ftsI
D Dda3937_01851 NADPH:quinone oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D Dda3937_02850 acsB; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K23376 sbnG; staphyloferrin B biosynthesis citrate synthase
C 99999 Others
D Dda3937_02731 yqjF; predicted quinol oxidase subunit K15977 K15977; putative oxidoreductase
D Dda3937_01679 putative membrane protein K15977 K15977; putative oxidoreductase
D Dda3937_03503 putative membrane protein K15977 K15977; putative oxidoreductase
D Dda3937_02502 ypfH; hypothetical protein K06999 K06999; phospholipase/carboxylesterase
D Dda3937_00888 yfiQ; predicted acyl-CoA synthetase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Dda3937_02496 cspE; DNA-binding transcriptional repressor K03704 cspA; cold shock protein
D Dda3937_02365 cspD; cold shock protein K03704 cspA; cold shock protein
D Dda3937_00017 cspC; stress protein, member of the CspA-family K03704 cspA; cold shock protein
D Dda3937_00328 Cold shock protein K03704 cspA; cold shock protein
D Dda3937_00236 rsd; anti-sigma D K07740 rsd; regulator of sigma D
D Dda3937_03309 glnK; nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB K04752 glnK; nitrogen regulatory protein P-II 2
D Dda3937_04417 yhgF; predicted transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D Dda3937_02364 clpS; regulatory protein for ClpA substrate specificity K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Dda3937_03968 tig; peptidyl-prolyl cis/trans isomerase (trigger factor) K03545 tig; trigger factor
D Dda3937_04030 yedZ; conserved inner membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D Dda3937_01835 fdhE; formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D Dda3937_02551 smpB; trans-translation protein K03664 smpB; SsrA-binding protein
D Dda3937_04116 [NiFe] hydrogenase metallocenter assembly protein HybG K04653 hypC; hydrogenase expression/formation protein HypC
D Dda3937_01821 hybG; hydrogenase 2 accessory protein K04653 hypC; hydrogenase expression/formation protein HypC
D Dda3937_01822 hypD; protein required for maturation of hydrogenases K04654 hypD; hydrogenase expression/formation protein HypD
D Dda3937_01823 hypE; carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein K04655 hypE; hydrogenase expression/formation protein HypE
D Dda3937_01825 hypF; [NiFe] hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Dda3937_03979 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D Dda3937_00246 yifB; MG(2+) chelatase family protein / ComM-related protein K07391 comM; magnesium chelatase family protein
D Dda3937_00135 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D Dda3937_00545 yhfA; conserved protein K07397 yhfA; putative redox protein
D Dda3937_00348 gntY; Fe-S biogenesis protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D Dda3937_03305 ybaZ; methylated-DNA--protein-cysteine methyltransferase-related protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Dda3937_00869 ygdG; Ssb-binding protein K01146 xni; protein Xni
D Dda3937_01324 Possible restriction endonuclease K07454 K07454; putative restriction endonuclease
D Dda3937_01707 yfjY; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Dda3937_03262 yicR; protein associated with replication fork, possible DNA repair protein K03630 radC; DNA repair protein RadC
D Dda3937_02061 rmuC; predicted recombination limiting protein K09760 rmuC; DNA recombination protein RmuC
D Dda3937_02366 ybjD; conserved protein with nucleoside triphosphate hydrolase domain K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D Dda3937_00719 yraN; hypothetical protein K07460 yraN; putative endonuclease
D Dda3937_02329 yhbQ; predicted endonuclease K07461 K07461; putative endonuclease
D Dda3937_01524 smf_1; Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D Dda3937_01484 DNA gyrase inhibitory protein K07470 sbmC; DNA gyrase inhibitor
D Dda3937_01199 sbmC; DNA gyrase inhibitory protein K07470 sbmC; DNA gyrase inhibitor
D Dda3937_00131 ycaJ; recombination protein K07478 ycaJ; putative ATPase
D Dda3937_01526 yrdD; putative DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D Dda3937_02198 DNA primase traC K06919 K06919; putative DNA primase/helicase
D Dda3937_00947 DNA primase traC K06919 K06919; putative DNA primase/helicase
D Dda3937_01307 DNA primase K06919 K06919; putative DNA primase/helicase
D Dda3937_01592 DNA primase K06919 K06919; putative DNA primase/helicase
D Dda3937_01295 ISEch2 OrfA K07483 K07483; transposase
D Dda3937_02407 ISEch2 OrfA K07483 K07483; transposase
D Dda3937_03797 ISEch2 OrfA K07483 K07483; transposase
D Dda3937_00050 ISEch10 OrfA K07483 K07483; transposase
D Dda3937_01211 ISEch1 transposase K07486 K07486; transposase
D Dda3937_01824 ISEch1 tranpsosase K07486 K07486; transposase
D Dda3937_02960 ISEch1 transposase K07486 K07486; transposase
D Dda3937_04006 ISEch1 transposase K07486 K07486; transposase
D Dda3937_03697 ISEch1 transposase K07486 K07486; transposase
D Dda3937_00987 ISEch1 transposase K07486 K07486; transposase
D Dda3937_03037 ISEch1 transposase K07486 K07486; transposase
D Dda3937_03404 ISEch1 transposase K07486 K07486; transposase
D Dda3937_03466 ISEch1 transposase K07486 K07486; transposase
D Dda3937_04558 IS and transposon-like protein K07491 rayT; REP-associated tyrosine transposase
D Dda3937_02493 ISEch5 transposase K07491 rayT; REP-associated tyrosine transposase
D Dda3937_03687 Transposase K07491 rayT; REP-associated tyrosine transposase
D Dda3937_00562 IS and transposon-like protein K07491 rayT; REP-associated tyrosine transposase
D Dda3937_03425 ISEch5 transposase K07491 rayT; REP-associated tyrosine transposase
D Dda3937_04473 Transposase K07497 K07497; putative transposase
D Dda3937_04547 Transposase K07497 K07497; putative transposase
D Dda3937_01228 Transposase K07497 K07497; putative transposase
D Dda3937_01865 ISEch8 OrfA K07497 K07497; putative transposase
D Dda3937_00051 ISEch10 OrfB K07497 K07497; putative transposase
D Dda3937_02284 ISEch12 OrfB K07497 K07497; putative transposase
D Dda3937_02285 ISEch12 OrfA K07497 K07497; putative transposase
D Dda3937_03594 putative transposase K07497 K07497; putative transposase
D Dda3937_03798 ISEch2 OrfB K07497 K07497; putative transposase
D Dda3937_01294 ISEch2 OrfB K07497 K07497; putative transposase
D Dda3937_02406 ISEch2 OrfB K07497 K07497; putative transposase
D Dda3937_01706 Integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D Dda3937_03116 pspA; regulatory protein for phage-shock-protein operon K03969 pspA; phage shock protein A
D Dda3937_03290 ybaB; conserved protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Dda3937_01182 yicJ; Xyloside transporter XynT K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Dda3937_00278 yifK; Probable transport protein yifK K03293 TC.AAT; amino acid transporter, AAT family
D Dda3937_02281 Acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dda3937_02631 sodium-solute symporter, putative K03307 TC.SSS; solute:Na+ symporter, SSS family
D Dda3937_01943 brnQ; branched chain amino acid transporter (LIV-II) K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D Dda3937_00904 Hydantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Dda3937_02536 ybhI; 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D Dda3937_02132 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D Dda3937_01049 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D Dda3937_03484 ybjL; predicted transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D Dda3937_00567 yciB; predicted inner membrane protein K06190 ispZ; intracellular septation protein
D Dda3937_02005 dcrB; DcrB protein precursor K27311 dcrB; inner membrane lipoprotein DcrB
D Dda3937_04394 ytfE; iron metabolism protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D Dda3937_03271 Spore maturation protein K06320 cgeB; spore maturation protein CgeB
D Dda3937_02927 ycgB; conserved protein K06415 spoVR; stage V sporulation protein R
D Dda3937_02045 envC; protease with a role in cell division K22719 envC; murein hydrolase activator
C 99993 Cell motility
D Dda3937_02256 ycfM; predicted outer membrane lipoprotein K07337 K07337; penicillin-binding protein activator
D Dda3937_02826 sxy; CRP-S promoter co-activator K07343 tfoX; DNA transformation protein and related proteins
D Dda3937_00871 syd; predicted protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D Dda3937_04206 ampE; predicted inner membrane protein K03807 ampE; AmpE protein
D Dda3937_03782 proQ; ProP effector K03607 proQ; ProP effector
D Dda3937_01161 uspA; universal stress global response regulator K06149 uspA; universal stress protein A
D Dda3937_00041 uspE; stress-induced protein K14055 uspE; universal stress protein E
D Dda3937_01695 ybdQ; Universal stress protein G K11932 uspG; universal stress protein G
D Dda3937_03102 Carbon starvation protein A K06200 cstA; carbon starvation protein
D Dda3937_01119 bipA; GTP-binding protein K06207 typA; GTP-binding protein
D Dda3937_02468 ybeZ; predicted protein with nucleoside triphosphate hydrolase domain K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Dda3937_03416 phoH; conserved protein with nucleoside triphosphate hydrolase domain K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Dda3937_03331 yeaG; conserved protein with nucleoside triphosphate hydrolase domain K07180 prkA; serine protein kinase
D Dda3937_00175 htrG; predicted signal transduction protein (SH3 domain) K07184 ygiM; SH3 domain protein
D Dda3937_02675 smp; Protein smp precursor K07186 smp; membrane protein
D Dda3937_01966 yajQ; predicted nucleotide binding protein K09767 yajQ; cyclic-di-GMP-binding protein
D Dda3937_02179 nifL; Nitrogen fixation regulatory protein K23916 nifL; nitrogen fixation regulatory protein
C 99992 Structural proteins
D Dda3937_00130 lolA; chaperone for lipoproteins K03634 lolA; outer membrane lipoprotein carrier protein
D Dda3937_00036 lolB; chaperone for lipoproteins K02494 lolB; outer membrane lipoprotein LolB
D Dda3937_00484 vacJ; predicted lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Dda3937_00269 wzzE; Enterobacterial Common Antigen (ECA) polysaccharide chain length modulator K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D Dda3937_00061 slyB; outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D Dda3937_01885 hlpA; periplasmic chaperone K06142 hlpA; outer membrane protein
D Dda3937_03910 nlpD; predicted outer membrane lipoprotein K06194 nlpD; lipoprotein NlpD
D Dda3937_02336 nlpI; lipoprotein K05803 nlpI; lipoprotein NlpI
D Dda3937_00570 ompW; outer membrane protein W K07275 ompW; outer membrane protein
D Dda3937_03714 yeaY; predicted lipoprotein K07285 slp; outer membrane lipoprotein
D Dda3937_01978 yajG; predicted lipoprotein K07286 yajG; uncharacterized lipoprotein
D Dda3937_03931 asmA; predicted assembly protein K07289 asmA; AsmA protein
D Dda3937_04161 ybbJ; conserved inner membrane protein K07340 ybbJ; inner membrane protein
D Dda3937_04610 osmB; lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB
D Dda3937_03366 osmE; Osmotically inducible lipoprotein E precursor K04064 osmE; osmotically inducible lipoprotein OsmE
D Dda3937_03704 yfgA; conserved protein K15539 rodZ; cytoskeleton protein RodZ
D Dda3937_00670 aaeX; membrane protein of efflux system K21695 aaeX; protein AaeX
C 99994 Others
D Dda3937_01093 phoU; negative regulator of PhoR/PhoB two-component regulator K02039 phoU; phosphate transport system protein
D Dda3937_00473 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D Dda3937_03564 opgG; Glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D Dda3937_02716 cutA; copper binding protein K03926 cutA; periplasmic divalent cation tolerance protein
D Dda3937_01608 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D Dda3937_04092 phnK; Phosphonates transport ATP-binding protein phnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D Dda3937_01382 apaG; protein associated with Co2+ and Mg2+ efflux K06195 apaG; ApaG protein
D Dda3937_00295 cyaY; iron-sulfur cluster (FeS) biosynthesis protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D Dda3937_03282 hmuS; Hemin transport protein hmuS K07225 hmuS; putative hemin transport protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Dda3937_02100 cvpA; membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D Dda3937_00553 Lytic enzyme K03791 K03791; putative chitinase
D Dda3937_00477 Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D Dda3937_03520 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D Dda3937_04329 mviM; putative oxidoreductase K03810 mviM; virulence factor
D Dda3937_02594 elaA; Acetyltransferase K02348 elaA; ElaA protein
D Dda3937_00886 yfiM; predicted protein K05811 yfiM; putative lipoprotein
D Dda3937_02671 osmY; periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D Dda3937_04063 ycdX; predicted zinc-binding hydrolase K04477 ycdX; putative hydrolase
D Dda3937_03840 yfiD; pyruvate formate lyase subunit K06866 grcA; autonomous glycyl radical cofactor
D Dda3937_04044 rssA; patatin-like protein K07001 K07001; NTE family protein
D Dda3937_00501 yadR; conserved protein K15724 erpA; iron-sulfur cluster insertion protein
D Dda3937_03669 sufA; Fe-S cluster assembly protein K05997 sufA; Fe-S cluster assembly protein SufA
D Dda3937_03668 sufB; SufB protein K09014 sufB; Fe-S cluster assembly protein SufB
D Dda3937_03666 sufD; SufD protein K09015 sufD; Fe-S cluster assembly protein SufD
D Dda3937_03364 ydjM; predicted inner membrane protein regulated by LexA K07038 K07038; inner membrane protein
D Dda3937_02003 yhjD; conserved inner membrane protein K07058 K07058; membrane protein
D Dda3937_02719 fxsA; inner membrane protein K07113 fxsA; UPF0716 protein FxsA
D Dda3937_00864 ygdK; predicted Fe-S metabolism protein K02426 sufE; cysteine desulfuration protein SufE
D Dda3937_03664 sufE; sulfur acceptor protein K02426 sufE; cysteine desulfuration protein SufE
D Dda3937_03559 yceA; conserved protein K07146 K07146; UPF0176 protein
D Dda3937_02086 hflD; predicted lysogenization regulator K07153 hflD; high frequency lysogenization protein
D Dda3937_00188 gudX; D-glucarate dehydratase-related protein K13918 gudX; glucarate dehydratase-related protein
D Dda3937_00529 slyX; conserved protein K03745 slyX; SlyX protein
D Dda3937_01525 smg; conserved protein K03747 smg; Smg protein
D Dda3937_00397 creA; conserved protein K05805 creA; CreA protein
D Dda3937_00421 sprT; conserved protein K02742 sprT; SprT protein
D Dda3937_02101 dedD; conserved protein K03749 dedD; DedD protein
D Dda3937_04184 damX; membrane protein K03112 damX; DamX protein
D Dda3937_03495 sanA; predicted protein K03748 sanA; SanA protein
D Dda3937_02104 dedA; conserved inner membrane protein K03975 dedA; membrane-associated protein
D Dda3937_04337 yebS; conserved inner membrane protein K03808 pqiA; paraquat-inducible protein A
D Dda3937_00083 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D Dda3937_00084 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D Dda3937_03519 pqiA; paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A
D Dda3937_03256 Putative inner membrane protein K00389 yidH; putative membrane protein
D Dda3937_01242 Integral membrane protein K08987 K08987; putative membrane protein
D Dda3937_03120 ycjF; conserved inner membrane protein K08990 ycjF; putative membrane protein
D Dda3937_02010 yhhL; conserved inner membrane protein K08993 yhhL; putative membrane protein
D Dda3937_03670 hypothetical protein K08996 yagU; putative membrane protein
D Dda3937_04045 ychJ; hypothetical protein K09858 K09858; SEC-C motif domain protein
D Dda3937_03306 ybaY; predicted outer membrane lipoprotein K09914 K09914; putative lipoprotein
D Dda3937_04375 psiE; predicted phosphate starvation inducible protein K13256 psiE; protein PsiE
D Dda3937_01914 phnA; conserved protein K06193 phnA; protein PhnA
C 99997 Function unknown
D Dda3937_03165 Ankyrin-like protein K06867 K06867; uncharacterized protein
D Dda3937_00620 Secreted protein Hcp K06887 K06887; uncharacterized protein
D Dda3937_01416 Secreted protein Hcp K06887 K06887; uncharacterized protein
D Dda3937_02168 Putative membrane protein K06887 K06887; uncharacterized protein
D Dda3937_00658 ycjY; hypothetical protein K06889 K06889; uncharacterized protein
D Dda3937_02615 yjfP; palmitoyl-CoA and pNP-butyrate esterase K06889 K06889; uncharacterized protein
D Dda3937_03769 ybhL; Putative membrane protein K06890 K06890; uncharacterized protein
D Dda3937_00029 Phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D Dda3937_03068 hypothetical protein K06903 W; Bacteriophage baseplate protein W
D Dda3937_03816 Gene D protein K06905 D; Bacteriophage probable baseplate hub protein
D Dda3937_03815 putative bacteriophage tail fiber protein U K06906 gpU; phage tail protein
D Dda3937_03810 Major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D Dda3937_03061 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D Dda3937_03811 Major tail tube protein K06908 FII; Bacteriophage tail tube protein
D Dda3937_03119 ycjX; conserved protein with nucleoside triphosphate hydrolase domain K06918 K06918; uncharacterized protein
D Dda3937_01702 yccU; predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain K06929 K06929; uncharacterized protein
D Dda3937_04612 ydhL; conserved protein K06938 K06938; uncharacterized protein
D Dda3937_00569 ykgJ; Ferredoxin K06940 K06940; uncharacterized protein
D Dda3937_02870 yedJ; metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Dda3937_03365 ydjN; predicted transporter K06956 K06956; uncharacterized protein
D Dda3937_01250 yqiA; esterase K07000 K07000; uncharacterized protein
D Dda3937_02259 ycfP; conserved protein K07000 K07000; uncharacterized protein
D Dda3937_03582 putative pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D Dda3937_02189 yejM; predicted hydrolase, inner membrane K07014 K07014; uncharacterized protein
D Dda3937_00542 yheT; Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase K07019 K07019; uncharacterized protein
D Dda3937_00386 yaaH; conserved inner membrane protein associated with acetate transport K07034 K07034; uncharacterized protein
D Dda3937_00537 yheV; Putative cytoplasmic protein, probably associated with Glutathione-regulated potassium-efflux K07070 K07070; uncharacterized protein
D Dda3937_04213 yfcH; conserved protein with NAD(P)-binding Rossmann-fold domain K07071 K07071; uncharacterized protein
D Dda3937_01468 putative membrane protein K07090 K07090; uncharacterized protein
D Dda3937_00781 putative membrane protein K07090 K07090; uncharacterized protein
D Dda3937_00495 yfcA; conserved inner membrane protein K07090 K07090; uncharacterized protein
D Dda3937_01012 Integral membrane protein K07090 K07090; uncharacterized protein
D Dda3937_04016 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D Dda3937_02075 gene II and X protein K07112 K07112; uncharacterized protein
D Dda3937_02074 Probable transmembrane protein K07112 K07112; uncharacterized protein
D Dda3937_01071 Rrf2-linked NADH-flavin reductase K07118 K07118; uncharacterized protein
D Dda3937_00304 abrB; Putative transport protein K07120 K07120; uncharacterized protein
D Dda3937_00720 yraM; predicted lipoprotein K07121 K07121; uncharacterized protein
D Dda3937_03537 Oxidoreductase, short chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein
D Dda3937_00802 hypothetical protein K07126 K07126; uncharacterized protein
D Dda3937_01612 yecN; predicted inner membrane protein K07136 K07136; uncharacterized protein
D Dda3937_00711 yhcC; predicted Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D Dda3937_03516 ycbX; predicted 2Fe-2S cluster-containing protein K07140 K07140; MOSC domain-containing protein
D Dda3937_03496 yeiB; conserved inner membrane protein K07148 K07148; uncharacterized protein
D Dda3937_03983 yqgA; Putative inner membrane protein K07150 K07150; uncharacterized protein
D Dda3937_01062 hypothetical protein K08998 K08998; uncharacterized protein
D Dda3937_02598 yggU; conserved protein K09131 K09131; uncharacterized protein
D Dda3937_02487 ybeD; conserved protein K09158 K09158; uncharacterized protein
D Dda3937_02923 ycgN; conserved protein K09160 K09160; uncharacterized protein
D Dda3937_04023 yfbU; conserved protein K09161 K09161; uncharacterized protein
D Dda3937_01400 yaiI; conserved protein K09768 K09768; uncharacterized protein
D Dda3937_00564 yciI; predicted enzyme K09780 K09780; uncharacterized protein
D Dda3937_03330 yeaH; conserved protein K09786 K09786; uncharacterized protein
D Dda3937_03293 ybaN; putative membrane protein K09790 K09790; uncharacterized protein
D Dda3937_03203 ycaR; conserved protein K09791 K09791; uncharacterized protein
D Dda3937_01045 putative periplasmic protein K09795 K09795; uncharacterized protein
D Dda3937_02044 yibQ; Putative periplasmic protein K09798 K09798; uncharacterized protein
D Dda3937_02549 yfjF; predicted protein K09801 K09801; uncharacterized protein
D Dda3937_03729 yeeX; conserved protein K09802 K09802; uncharacterized protein
D Dda3937_00410 yggE; conserved protein K09807 K09807; uncharacterized protein
D Dda3937_03280 ybjX; VirK K09824 virK; uncharacterized protein
D Dda3937_04582 putative lipoprotein K09857 K09857; uncharacterized protein
D Dda3937_03521 ymbA; conserved protein K09857 K09857; uncharacterized protein
D Dda3937_00391 yaaA; conserved protein K09861 K09861; uncharacterized protein
D Dda3937_02237 yacG; zinc-binding protein K09862 K09862; uncharacterized protein
D Dda3937_00240 yjaG; conserved protein K09891 K09891; uncharacterized protein
D Dda3937_01114 yihI; conserved protein K09894 K09894; uncharacterized protein
D Dda3937_02681 ygfB; predicted protein K09895 K09895; uncharacterized protein
D Dda3937_01109 yihD; conserved protein K09896 K09896; uncharacterized protein
D Dda3937_00245 yifE; conserved protein K09897 K09897; uncharacterized protein
D Dda3937_00543 yheU; conserved protein K09898 K09898; uncharacterized protein
D Dda3937_04022 yfbV; conserved inner membrane protein K09899 K09899; uncharacterized protein
D Dda3937_00560 yciU; predicted protein K09901 K09901; uncharacterized protein
D Dda3937_02921 ycgL; conserved protein K09902 K09902; uncharacterized protein
D Dda3937_02188 yejL; conserved protein K09904 K09904; uncharacterized protein
D Dda3937_01607 yecM; predicted metal-binding enzyme K09907 K09907; uncharacterized protein
D Dda3937_02831 UPF0319 protein yccT precursor K09909 K09909; uncharacterized protein
D Dda3937_02636 yacL; conserved protein K09910 K09910; uncharacterized protein
D Dda3937_00022 ycbG; conserved protein K09911 K09911; uncharacterized protein
D Dda3937_01604 yceH; hypothetical protein K09915 K09915; uncharacterized protein
D Dda3937_03337 yeaC; conserved protein K09916 K09916; uncharacterized protein
D Dda3937_03718 yoaH; conserved protein K09917 K09917; uncharacterized protein
D Dda3937_04304 yqiB; predicted dehydrogenase K09920 K09920; uncharacterized protein
D Dda3937_00298 yigA; conserved protein K09921 K09921; uncharacterized protein
D Dda3937_02142 hypothetical protein K09922 K09922; uncharacterized protein
D Dda3937_03397 yggL; predicted protein K09923 K09923; uncharacterized protein
D Dda3937_00430 yjeT; conserved inner membrane protein K09937 K09937; uncharacterized protein
D Dda3937_03012 Uncharacterized protein conserved in bacteria K09945 K09945; uncharacterized protein
D Dda3937_00180 Putative cytoplasmic protein K09954 K09954; uncharacterized protein
D Dda3937_03587 hypothetical protein K09958 K09958; uncharacterized protein
D Dda3937_01000 Urea carboxylase-related aminomethyltransferase K09967 K09967; uncharacterized protein
D Dda3937_01001 Urea carboxylase-related aminomethyltransferase K09967 K09967; uncharacterized protein
D Dda3937_04157 ybaP; conserved protein K09973 K09973; uncharacterized protein
D Dda3937_01672 ydjR; hypothetical protein K09975 K09975; uncharacterized protein
D Dda3937_01271 yhbP; conserved protein K09979 K09979; uncharacterized protein
D Dda3937_01314 hypothetical protein K09982 K09982; uncharacterized protein
D Dda3937_04512 hypothetical protein K09984 K09984; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024