+D GENES KO
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KEGG Orthology (KO) - Deferribacter desulfuricans
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ddf00010]
D DEFDS_1337 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D DEFDS_1026 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DEFDS_1408 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DEFDS_0062 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DEFDS_0129 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DEFDS_1892 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DEFDS_1896 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DEFDS_1177 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DEFDS_0201 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DEFDS_1355 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DEFDS_0235 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_0568 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DEFDS_0634 2-oxoacid oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0805 2-oxoacid oxidoreductase, gamma-alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0635 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0804 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_1932 alcohol dehydrogenase, zinc-binding K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DEFDS_0763 alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_1461 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ddf00020]
D DEFDS_0814 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DEFDS_0679 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DEFDS_0917 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DEFDS_0918 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_0634 2-oxoacid oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0805 2-oxoacid oxidoreductase, gamma-alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0635 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0804 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0636 2-oxoacid oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DEFDS_0633 2-oxoacid oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DEFDS_0922 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DEFDS_0921 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DEFDS_0920 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DEFDS_0686 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DEFDS_0685 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DEFDS_0688 sdhC; succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DEFDS_0687 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DEFDS_0916 fumarate hydratase, class I, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DEFDS_0915 fumarate hydratase, class I, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DEFDS_0234 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DEFDS_1275 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DEFDS_1461 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DEFDS_0568 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ddf00030]
D DEFDS_1026 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DEFDS_2125 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DEFDS_0073 conserved hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DEFDS_0352 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DEFDS_0484 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DEFDS_1075 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_0461 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DEFDS_0764 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D DEFDS_1959 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DEFDS_0062 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DEFDS_1408 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ddf00040]
D DEFDS_0115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DEFDS_1708 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DEFDS_2125 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DEFDS_1741 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:ddf00051]
D DEFDS_1139 mannose-1-phosphate guanylyltransferase / phosphomannose isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_1741 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D DEFDS_0170 HAD-superfamily hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DEFDS_1408 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DEFDS_0062 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DEFDS_0129 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DEFDS_0484 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DEFDS_1049 PTS system, fructose-specific enzyme II, A component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DEFDS_1052 conserved hypothetical protein K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:ddf00052]
D DEFDS_1911 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DEFDS_1708 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_1337 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D DEFDS_0115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:ddf00500]
D DEFDS_1708 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_1337 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D DEFDS_1026 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ddf00520]
D DEFDS_1947 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DEFDS_1033 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DEFDS_1946 glmU; N-acetylglucosamine biosynthesis bifunctional enzyme K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DEFDS_0102 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DEFDS_0475 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DEFDS_0134 aminotransferase, DegT/DnrJ/EryC1/StrS family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DEFDS_0339 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DEFDS_0375 UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D DEFDS_0370 N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D DEFDS_1337 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_1708 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DEFDS_0115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DEFDS_1911 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DEFDS_1049 PTS system, fructose-specific enzyme II, A component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DEFDS_1052 conserved hypothetical protein K02796 manZ; mannose PTS system EIID component
D DEFDS_1026 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DEFDS_1139 mannose-1-phosphate guanylyltransferase / phosphomannose isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DEFDS_0368 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00620 Pyruvate metabolism [PATH:ddf00620]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0568 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DEFDS_0634 2-oxoacid oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0805 2-oxoacid oxidoreductase, gamma-alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0635 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0804 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1932 alcohol dehydrogenase, zinc-binding K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DEFDS_0763 alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DEFDS_1816 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DEFDS_1815 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DEFDS_1355 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DEFDS_1173 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DEFDS_0456 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DEFDS_0457 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_1227 propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_0579 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DEFDS_0637 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DEFDS_1550 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D DEFDS_1420 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DEFDS_0938 conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DEFDS_2142 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DEFDS_1275 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DEFDS_0916 fumarate hydratase, class I, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DEFDS_0915 fumarate hydratase, class I, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DEFDS_0234 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DEFDS_1461 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DEFDS_0235 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1662 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DEFDS_1179 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ddf00630]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DEFDS_0814 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DEFDS_0679 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DEFDS_0917 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1935 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DEFDS_1228 propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D DEFDS_2077 methylmalonyl-CoA mutase, C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D DEFDS_1225 methylmalonyl-CoA mutase, N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DEFDS_1347 glcD; glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D DEFDS_1346 glcF; glycolate oxidase, iron-sulfur subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D DEFDS_2131 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic component K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D DEFDS_1222 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DEFDS_1474 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DEFDS_0485 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1959 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DEFDS_1260 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DEFDS_1331 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DEFDS_1330 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DEFDS_1329 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:ddf00640]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_1550 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D DEFDS_1816 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DEFDS_1815 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1834 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DEFDS_1127 alcohol dehydrogenase, zinc-binding K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D DEFDS_1173 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DEFDS_0456 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DEFDS_0457 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_1227 propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_0579 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DEFDS_1228 propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D DEFDS_1935 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DEFDS_2077 methylmalonyl-CoA mutase, C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D DEFDS_1225 methylmalonyl-CoA mutase, N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DEFDS_0920 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DEFDS_0921 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DEFDS_0917 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:ddf00650]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1836 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DEFDS_1467 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DEFDS_1835 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D DEFDS_2076 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D DEFDS_1834 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DEFDS_1241 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D DEFDS_1240 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D DEFDS_0686 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DEFDS_0685 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DEFDS_0688 sdhC; succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DEFDS_0687 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DEFDS_0568 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DEFDS_0634 2-oxoacid oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0805 2-oxoacid oxidoreductase, gamma-alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0635 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0804 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_1919 3-oxoacid CoA-transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D DEFDS_1667 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DEFDS_1666 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ddf00660]
D DEFDS_1667 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DEFDS_1666 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DEFDS_0920 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DEFDS_0921 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DEFDS_0238 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DEFDS_0237 leuD; 3-isopropylmalate dehydratase, small subuni K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DEFDS_0681 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ddf00562]
D DEFDS_1499 inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DEFDS_0129 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ddf00190]
D DEFDS_1985 nuoA; NADH-quinone oxidoreductase, A subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DEFDS_1984 nuoB; NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DEFDS_1983 nuoC; NADH-quinone oxidoreductase, C subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D DEFDS_1982 nuoD; NADH-quinone oxidoreductase, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D DEFDS_1981 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DEFDS_1980 nuoF; NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DEFDS_1979 nuoG; NADH-quinone oxidoreductase, G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D DEFDS_1978 nuoH; NADH-quinone oxidoreductase, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DEFDS_1977 nuoI; NADH-quinone oxidoreductase, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DEFDS_1976 nuoJ; NADH-quinone oxidoreductase, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DEFDS_1975 nuoK; NADH-quinone oxidoreductase, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DEFDS_1974 nuoL; NADH-quinone oxidoreductase, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DEFDS_1973 nuoM; NADH-quinone oxidoreductase, M subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DEFDS_1972 nuoN; NADH-quinone oxidoreductase, N subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DEFDS_1073 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DEFDS_0686 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DEFDS_0685 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DEFDS_0688 sdhC; succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DEFDS_0687 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DEFDS_1619 cydA; cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DEFDS_1171 cytochrome c family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DEFDS_1620 cydB; cytochrome bd oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DEFDS_1888 atpA; F0F1-type ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DEFDS_1886 atpD; F0F1-type ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DEFDS_1887 atpG; F0F1-type ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DEFDS_1889 atpH; F0F1-type ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DEFDS_1885 atpC; F0F1-type ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DEFDS_1735 atpB; F0F1-type ATP synthase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DEFDS_1890 atpF; F0F1-type ATP synthase, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DEFDS_1891 atpF'; F0F1-type ATP synthase, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DEFDS_1734 atpE; hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DEFDS_0204 ppa; inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ddf00710]
D DEFDS_1892 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DEFDS_0062 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DEFDS_1408 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DEFDS_0073 conserved hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DEFDS_0484 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DEFDS_0129 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DEFDS_2125 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DEFDS_0352 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DEFDS_1461 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DEFDS_0235 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ddf00720]
D DEFDS_0568 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D DEFDS_0235 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DEFDS_1275 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DEFDS_0916 fumarate hydratase, class I, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DEFDS_0915 fumarate hydratase, class I, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D DEFDS_0234 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DEFDS_0686 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DEFDS_0685 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DEFDS_0688 sdhC; succinate dehydrogenase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DEFDS_0687 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DEFDS_0921 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DEFDS_0920 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_0634 2-oxoacid oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0805 2-oxoacid oxidoreductase, gamma-alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D DEFDS_0635 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0804 2-oxoacid oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D DEFDS_0636 2-oxoacid oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D DEFDS_0633 2-oxoacid oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DEFDS_0922 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D DEFDS_0918 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DEFDS_0679 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DEFDS_0917 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D DEFDS_1173 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DEFDS_0456 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DEFDS_0457 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_1227 propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_0579 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DEFDS_1935 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DEFDS_1225 methylmalonyl-CoA mutase, N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DEFDS_2077 methylmalonyl-CoA mutase, C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D DEFDS_1613 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D DEFDS_0005 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DEFDS_1143 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DEFDS_0246 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D DEFDS_1815 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DEFDS_1816 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ddf00680]
D DEFDS_1260 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DEFDS_1331 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DEFDS_1330 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DEFDS_1329 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D DEFDS_1613 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D DEFDS_0246 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D DEFDS_0485 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DEFDS_1959 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DEFDS_0201 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DEFDS_0062 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DEFDS_1408 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DEFDS_1816 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DEFDS_1815 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_1896 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DEFDS_1177 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DEFDS_0857 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:ddf00910]
D DEFDS_2085 narK; nitrate/nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DEFDS_2091 narU; nitrate/nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DEFDS_2089 narG; nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2088 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2086 narI; nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_1820 napA; periplasmic nitrate reductase NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D DEFDS_0776 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D DEFDS_1818 multiheme c-type cytochrome K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6]
D DEFDS_1921 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DEFDS_1474 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DEFDS_2137 ferredoxin-dependent glutamate synthase, alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DEFDS_1936 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ddf00920]
D DEFDS_0670 molybdopterin oxidoreductase, molybdopterin-binding subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DEFDS_1699 molybdopterin oxidoreductase, molybdopterin-binding subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DEFDS_1444 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DEFDS_2169 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DEFDS_0207 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DEFDS_1867 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DEFDS_1124 conserved hypothetical protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ddf00061]
D DEFDS_1173 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DEFDS_0456 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DEFDS_0457 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_1227 propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DEFDS_0579 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DEFDS_0153 acpP; acyl carrier protein ACP K02078 acpP; acyl carrier protein
D DEFDS_0151 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DEFDS_0150 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DEFDS_0154 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DEFDS_2183 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0152 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0372 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0704 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0107 fabZ; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DEFDS_1807 fabI; enoyl-[acyl-carrier protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DEFDS_1496 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1468 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0642 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ddf00071]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1466 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DEFDS_1467 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DEFDS_1834 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DEFDS_1496 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1468 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0642 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1932 alcohol dehydrogenase, zinc-binding K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DEFDS_0763 alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ddf00561]
D DEFDS_1959 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DEFDS_1230 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DEFDS_0149 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DEFDS_1095 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DEFDS_1512 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DEFDS_1080 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DEFDS_1901 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D DEFDS_0730 monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:ddf00564]
D DEFDS_1969 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DEFDS_1577 glpD; glycerol-3-phosphate dehydrogenase, FAD-dependent K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DEFDS_1095 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DEFDS_1512 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DEFDS_1080 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DEFDS_1578 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DEFDS_0122 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DEFDS_1663 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DEFDS_1664 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DEFDS_0041 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D DEFDS_0515 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D DEFDS_1093 pgsA; phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ddf00592]
D DEFDS_1466 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ddf00230]
D DEFDS_2172 phosphohydrolase, MutT/NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_0461 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DEFDS_1603 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DEFDS_1188 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DEFDS_0168 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DEFDS_1604 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D DEFDS_1606 purS; phosphoribosylformylglycinamidine synthase, small subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D DEFDS_1605 purQ; phosphoribosylformylglycinamidine synthase, large subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DEFDS_0167 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DEFDS_1189 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DEFDS_1861 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DEFDS_1224 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DEFDS_1187 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DEFDS_1267 stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DEFDS_0996 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DEFDS_1028 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DEFDS_0469 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DEFDS_0089 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DEFDS_0447 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DEFDS_0980 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D DEFDS_0470 guaA; GMP synthase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DEFDS_1428 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DEFDS_1169 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DEFDS_P214 ribonucleotide reductase, large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DEFDS_0159 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D DEFDS_0048 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DEFDS_1930 phosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DEFDS_1335 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DEFDS_2122 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DEFDS_0482 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DEFDS_1752 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DEFDS_1789 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DEFDS_0189 histidine triad family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:ddf00240]
D DEFDS_1217 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DEFDS_1021 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DEFDS_0841 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DEFDS_0840 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DEFDS_1219 pyrD; dihydroorotate oxidase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D DEFDS_1218 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D DEFDS_0411 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D DEFDS_0566 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DEFDS_0567 pyrF; orotidine 5`-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DEFDS_0119 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DEFDS_0089 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DEFDS_1789 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DEFDS_0643 septum formation protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DEFDS_1037 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DEFDS_2097 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DEFDS_1267 stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DEFDS_1106 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DEFDS_0842 pyrR; bifunctional pyrimidine biosynthesis protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DEFDS_0482 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DEFDS_1169 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DEFDS_P214 ribonucleotide reductase, large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DEFDS_0486 CMP/dCMP deaminase, zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DEFDS_0069 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DEFDS_P060 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DEFDS_1519 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DEFDS_0098 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ddf00250]
D DEFDS_0198 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DEFDS_0619 aspC; aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DEFDS_1172 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DEFDS_1627 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DEFDS_2110 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DEFDS_2122 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DEFDS_1224 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DEFDS_0841 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DEFDS_2137 ferredoxin-dependent glutamate synthase, alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DEFDS_1921 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DEFDS_1067 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D DEFDS_1474 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DEFDS_1217 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DEFDS_1021 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DEFDS_1605 purQ; phosphoribosylformylglycinamidine synthase, large subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DEFDS_1947 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DEFDS_1603 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ddf00260]
D DEFDS_1178 thrA; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DEFDS_1418 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DEFDS_1176 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DEFDS_0090 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DEFDS_1183 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DEFDS_0485 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DEFDS_1959 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DEFDS_1896 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DEFDS_1177 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DEFDS_0857 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1663 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DEFDS_2182 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DEFDS_0444 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DEFDS_0443 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DEFDS_1396 tryptophan synthase, beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ddf00270]
D DEFDS_2169 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DEFDS_0207 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DEFDS_0912 aminotransferase, I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DEFDS_1683 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DEFDS_1515 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DEFDS_0969 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D DEFDS_0968 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D DEFDS_0996 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DEFDS_1223 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D DEFDS_0474 S-methyl-5-thioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D DEFDS_0061 translation initiation factor IF-2B K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D DEFDS_1514 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DEFDS_1178 thrA; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DEFDS_1418 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DEFDS_1176 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DEFDS_1867 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DEFDS_0208 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DEFDS_1968 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DEFDS_1444 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DEFDS_0919 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DEFDS_0857 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:ddf00280]
D DEFDS_1968 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1834 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DEFDS_1466 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DEFDS_1228 propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D DEFDS_1935 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DEFDS_2077 methylmalonyl-CoA mutase, C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D DEFDS_1225 methylmalonyl-CoA mutase, N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DEFDS_0651 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DEFDS_1919 3-oxoacid CoA-transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ddf00290]
D DEFDS_2182 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DEFDS_0238 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DEFDS_0237 leuD; 3-isopropylmalate dehydratase, small subuni K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DEFDS_0681 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DEFDS_1667 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DEFDS_1666 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DEFDS_1665 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DEFDS_1668 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DEFDS_1968 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DEFDS_0619 aspC; aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DEFDS_1662 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DEFDS_1179 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ddf00300]
D DEFDS_1176 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DEFDS_1178 thrA; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DEFDS_1418 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DEFDS_0215 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DEFDS_0216 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DEFDS_1629 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DEFDS_0214 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DEFDS_1993 aminotransferase, I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DEFDS_0213 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DEFDS_0591 murE; UDP-N-acetylmuramoylananine-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DEFDS_0592 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ddf00310]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1850 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:ddf00220]
D DEFDS_1628 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DEFDS_1627 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DEFDS_2110 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DEFDS_1605 purQ; phosphoribosylformylglycinamidine synthase, large subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DEFDS_1474 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DEFDS_1217 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DEFDS_1021 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DEFDS_1921 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DEFDS_0619 aspC; aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DEFDS_1115 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D DEFDS_2004 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DEFDS_0261 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DEFDS_0210 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DEFDS_1629 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DEFDS_0765 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ddf00330]
D DEFDS_0768 hyuA; N-methylhydantoinase A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D DEFDS_0769 hyuB; N-methylhydantoinase B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D DEFDS_1288 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D DEFDS_0967 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D DEFDS_0968 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D DEFDS_0969 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D DEFDS_1286 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D DEFDS_1283 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DEFDS_1068 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D DEFDS_1067 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D DEFDS_1383 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DEFDS_1382 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DEFDS_2103 pyruvate formate-lyase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D DEFDS_1631 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:ddf00340]
D DEFDS_0103 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DEFDS_2123 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D DEFDS_1904 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D DEFDS_0042 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DEFDS_0043 hisH; amidotransferase HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DEFDS_1905 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DEFDS_0044 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DEFDS_2101 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DEFDS_1965 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D DEFDS_0934 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D DEFDS_0935 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D DEFDS_0937 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D DEFDS_0936 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:ddf00350]
D DEFDS_2101 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DEFDS_1932 alcohol dehydrogenase, zinc-binding K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DEFDS_0763 alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:ddf00360]
D DEFDS_0957 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DEFDS_0964 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DEFDS_1836 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DEFDS_2101 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:ddf00380]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ddf00400]
D DEFDS_2100 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DEFDS_0830 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DEFDS_0450 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DEFDS_0453 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DEFDS_0449 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DEFDS_2098 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DEFDS_0612 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DEFDS_0438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DEFDS_0439 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DEFDS_0440 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DEFDS_0442 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DEFDS_0441 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DEFDS_0444 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DEFDS_0443 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DEFDS_1396 tryptophan synthase, beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DEFDS_2102 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D DEFDS_2099 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DEFDS_2101 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ddf00410]
D DEFDS_0845 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DEFDS_0844 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DEFDS_1834 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ddf00430]
D DEFDS_0773 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DEFDS_1172 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DEFDS_1921 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DEFDS_1815 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DEFDS_1816 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ddf00450]
D DEFDS_0912 aminotransferase, I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DEFDS_1683 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DEFDS_0503 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DEFDS_0345 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DEFDS_0273 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DEFDS_0066 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ddf00460]
D DEFDS_0773 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DEFDS_0485 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ddf00470]
D DEFDS_1118 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DEFDS_0598 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DEFDS_1605 purQ; phosphoribosylformylglycinamidine synthase, large subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DEFDS_1793 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DEFDS_0594 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DEFDS_0214 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DEFDS_0213 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DEFDS_1631 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00480 Glutathione metabolism [PATH:ddf00480]
D DEFDS_0773 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DEFDS_0774 conserved hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D DEFDS_2072 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DEFDS_0918 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DEFDS_0968 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ddf00540]
D DEFDS_0108 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DEFDS_0033 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DEFDS_0106 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DEFDS_0110 conserved hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DEFDS_1723 lpxB; lipid A disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DEFDS_0341 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DEFDS_1039 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DEFDS_1038 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DEFDS_1040 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DEFDS_1036 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DEFDS_0137 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DEFDS_0227 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DEFDS_0511 ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DEFDS_0138 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DEFDS_0228 glycerol-3-phosphate cytidyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DEFDS_0970 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D DEFDS_0333 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DEFDS_1147 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DEFDS_0332 glycosyl transferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ddf00541]
D DEFDS_1708 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DEFDS_1911 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DEFDS_0115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DEFDS_0576 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DEFDS_1139 mannose-1-phosphate guanylyltransferase / phosphomannose isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DEFDS_0368 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
D DEFDS_1946 glmU; N-acetylglucosamine biosynthesis bifunctional enzyme K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DEFDS_0339 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DEFDS_0134 aminotransferase, DegT/DnrJ/EryC1/StrS family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:ddf00550]
D DEFDS_0102 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DEFDS_0475 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DEFDS_0597 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DEFDS_0594 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DEFDS_0591 murE; UDP-N-acetylmuramoylananine-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DEFDS_0598 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DEFDS_0592 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DEFDS_0121 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DEFDS_0409 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DEFDS_0593 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DEFDS_0596 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DEFDS_0662 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_0448 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_1161 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DEFDS_0590 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ddf00552]
D DEFDS_0409 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DEFDS_0730 monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D DEFDS_1901 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ddf00543]
D DEFDS_2169 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ddf00730]
D DEFDS_1615 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DEFDS_2003 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DEFDS_1999 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D DEFDS_2167 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1944 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1558 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1945 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DEFDS_0221 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D DEFDS_0944 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DEFDS_0220 thiG; thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DEFDS_2135 conserved hypothetical protein K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D DEFDS_1616 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DEFDS_1617 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DEFDS_1752 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ddf00740]
D DEFDS_1098 riboflavin biosynthesis bifunctional protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DEFDS_1096 ribD; bifunctional riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DEFDS_1099 ribE; riboflavin synthase, beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DEFDS_1097 ribC; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DEFDS_1953 ribF; riboflavin biosynthesis regulatory protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DEFDS_2172 phosphohydrolase, MutT/NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DEFDS_0321 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ddf00750]
D DEFDS_1034 pdxJ; pyridoxine 5-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D DEFDS_0090 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ddf00760]
D DEFDS_0198 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DEFDS_0483 nadA; quinolinate synthase, subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D DEFDS_0506 nadC; nicotinate-nucleotide pyrophosphorylase, carboxylating K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DEFDS_1900 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DEFDS_1267 stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DEFDS_1381 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DEFDS_1789 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DEFDS_0468 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DEFDS_0188 transcription regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D DEFDS_0942 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ddf00770]
D DEFDS_1667 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DEFDS_1666 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DEFDS_1665 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DEFDS_1668 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DEFDS_0843 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DEFDS_2126 conserved hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DEFDS_0844 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DEFDS_1562 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DEFDS_1426 P-pantothenate cysteine ligase / P-pantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DEFDS_1789 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DEFDS_0158 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DEFDS_0315 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DEFDS_1035 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DEFDS_1968 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DEFDS_0845 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ddf00780]
D DEFDS_1303 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D DEFDS_0154 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DEFDS_2183 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0152 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0372 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0704 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0107 fabZ; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DEFDS_1807 fabI; enoyl-[acyl-carrier protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DEFDS_1301 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DEFDS_2166 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DEFDS_1299 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DEFDS_1298 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DEFDS_1300 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DEFDS_1563 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ddf00785]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00790 Folate biosynthesis [PATH:ddf00790]
D DEFDS_2107 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D DEFDS_1511 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DEFDS_1030 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DEFDS_0578 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DEFDS_1098 riboflavin biosynthesis bifunctional protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DEFDS_1304 para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D DEFDS_1305 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D DEFDS_1007 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DEFDS_1008 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DEFDS_0939 transcriptional regulator, ExsB family K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DEFDS_0778 conserved hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D DEFDS_1473 conserved hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D DEFDS_2141 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DEFDS_0466 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DEFDS_1135 moaE; molybdopterin biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DEFDS_0070 conserved hypothetical protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DEFDS_1594 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DEFDS_0827 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DEFDS_1023 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DEFDS_1017 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ddf00670]
D DEFDS_0005 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DEFDS_0485 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DEFDS_0168 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DEFDS_1187 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DEFDS_1994 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DEFDS_1129 conserved hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DEFDS_1683 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DEFDS_0098 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D DEFDS_1143 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DEFDS_0480 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ddf00860]
D DEFDS_0809 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DEFDS_1739 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DEFDS_0812 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DEFDS_0810 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DEFDS_0811 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D DEFDS_0318 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DEFDS_1356 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D DEFDS_0319 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DEFDS_2056 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D DEFDS_2045 conserved hypothetical protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D DEFDS_1457 radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D DEFDS_2060 cbiK; sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D DEFDS_2055 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D DEFDS_2040 cbiH; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D DEFDS_2042 cbiF; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D DEFDS_2041 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D DEFDS_2053 cbiJ; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D DEFDS_2044 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D DEFDS_2043 cbiE; precorrin-6Y C(5,15)-methyltransferase (decarboxylating) K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D DEFDS_2054 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D DEFDS_2061 cbiA1; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DEFDS_0534 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DEFDS_2047 cbiP; adenosylcobyric acid synthase (glutamine-hydrolyzing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DEFDS_2046 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DEFDS_2051 cobU; adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DEFDS_2049 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DEFDS_2052 conserved hypothetical protein K25496 cbiR; adenosylcobalamin phosphodiesterase
D DEFDS_2050 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DEFDS_2048 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ddf00130]
D DEFDS_0320 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DEFDS_1642 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D DEFDS_0321 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DEFDS_1643 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DEFDS_1279 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D DEFDS_1711 conserved hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D DEFDS_1229 conserved hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D DEFDS_0011 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D DEFDS_1123 conserved hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ddf00900]
D DEFDS_0944 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DEFDS_0123 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DEFDS_1001 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D DEFDS_0460 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DEFDS_1652 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D DEFDS_1800 ispG; 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DEFDS_2096 ispH; hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_0321 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DEFDS_0945 geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DEFDS_0648 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DEFDS_0121 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DEFDS_1961 peptidase, M48 family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ddf00907]
D DEFDS_1466 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DEFDS_0073 conserved hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D DEFDS_0576 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D DEFDS_0576 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ddf00332]
D DEFDS_1383 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DEFDS_1382 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ddf00261]
D DEFDS_1178 thrA; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DEFDS_1418 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DEFDS_0215 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DEFDS_0216 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ddf00521]
D DEFDS_1337 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D DEFDS_0735 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DEFDS_1499 inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DEFDS_0576 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DEFDS_1337 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D DEFDS_0576 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ddf00401]
D DEFDS_2099 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DEFDS_2101 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DEFDS_0438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DEFDS_0439 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DEFDS_0151 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DEFDS_2183 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0152 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0372 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0704 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_1807 fabI; enoyl-[acyl-carrier protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DEFDS_0153 acpP; acyl carrier protein ACP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D DEFDS_1515 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ddf00362]
D DEFDS_1466 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DEFDS_1325 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DEFDS_1467 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DEFDS_1836 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ddf00627]
D DEFDS_0637 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DEFDS_0321 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ddf00625]
D DEFDS_1932 alcohol dehydrogenase, zinc-binding K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DEFDS_0763 alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DEFDS_0907 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D DEFDS_0907 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D DEFDS_1325 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ddf00633]
D DEFDS_0076 Ni-Fe hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D DEFDS_0077 Ni-Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D DEFDS_0246 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
D DEFDS_1466 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
D DEFDS_1550 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D DEFDS_1325 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ddf00626]
D DEFDS_1932 alcohol dehydrogenase, zinc-binding K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DEFDS_0763 alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ddf03020]
D DEFDS_1779 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DEFDS_1778 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DEFDS_1745 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DEFDS_1427 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ddf03010]
D DEFDS_2095 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DEFDS_0051 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DEFDS_1766 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DEFDS_1746 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DEFDS_1755 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DEFDS_1987 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DEFDS_1776 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DEFDS_1758 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DEFDS_0248 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DEFDS_1773 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DEFDS_1747 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DEFDS_1777 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DEFDS_1748 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DEFDS_1759 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DEFDS_1521 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DEFDS_0254 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DEFDS_1763 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DEFDS_1989 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DEFDS_1768 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DEFDS_1532 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DEFDS_0196 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DEFDS_1782 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DEFDS_1769 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DEFDS_1772 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DEFDS_1771 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DEFDS_1760 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DEFDS_1757 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DEFDS_1780 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DEFDS_0035 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DEFDS_1781 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DEFDS_1783 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DEFDS_0249 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DEFDS_1762 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DEFDS_1754 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DEFDS_1765 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DEFDS_1744 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DEFDS_1756 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DEFDS_0250 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DEFDS_1501 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DEFDS_0265 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DEFDS_1767 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DEFDS_1770 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DEFDS_1761 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DEFDS_0266 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DEFDS_0316 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DEFDS_1764 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DEFDS_0097 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DEFDS_0148 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DEFDS_1786 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DEFDS_0346 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DEFDS_1502 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DEFDS_1749 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DEFDS_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DEFDS_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DEFDS_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DEFDS_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DEFDS_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DEFDS_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ddf00970]
D DEFDS_t12 trn_Ala1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DEFDS_t42 trn_Ala3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DEFDS_t39 trn_Ala2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DEFDS_t06 trn_Arg1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t25 trn_Arg4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t20 trn_Arg3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t10 trn_Arg2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t40 trn_Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DEFDS_t34 trn_Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DEFDS_t41 trn_Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DEFDS_t26 trn_Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DEFDS_t36 trn_Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DEFDS_t03 trn_Gly1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t09 trn_Gly2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t13 trn_Gly3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t31 trn_Gly4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t05 trn_His; tRNA-His K14226 tRNA-His; tRNA His
D DEFDS_t11 trn_Ile1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DEFDS_t43 trn_Ile2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DEFDS_t15 trn_Leu3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t08 trn_Leu2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t38 trn_Leu5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t04 trn_Leu1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t22 trn_Leu4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t37 trn_Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DEFDS_t01 trn_Met1; tRNA-Met K14230 tRNA-Met; tRNA Met
D DEFDS_t02 trn_Met2; tRNA-Met K14230 tRNA-Met; tRNA Met
D DEFDS_t27 trn_Met3; tRNA-Met K14230 tRNA-Met; tRNA Met
D DEFDS_t19 trn_Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DEFDS_t23 trn_Pro1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DEFDS_t24 trn_Pro2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DEFDS_t21 trn_Ser4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t17 trn_Ser2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t16 trn_Ser1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t18 trn_Ser3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t14 trn_Thr1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DEFDS_t33 trn_Thr3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DEFDS_t30 trn_Thr2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DEFDS_t29 trn_Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DEFDS_t32 trn_Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DEFDS_t35 trn_Val2; tRNA-Val K14237 tRNA-Val; tRNA Val
D DEFDS_t28 trn_Val1; tRNA-Val K14237 tRNA-Val; tRNA Val
D DEFDS_t07 trn_SeC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D DEFDS_1071 glnS; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D DEFDS_1951 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DEFDS_1934 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DEFDS_1950 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DEFDS_1463 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DEFDS_1552 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DEFDS_0639 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DEFDS_0236 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DEFDS_1504 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DEFDS_1957 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DEFDS_0273 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DEFDS_0838 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DEFDS_0066 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DEFDS_1994 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DEFDS_1129 conserved hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DEFDS_0507 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DEFDS_0790 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DEFDS_1185 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DEFDS_1155 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DEFDS_1359 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DEFDS_2069 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DEFDS_1553 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DEFDS_1622 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DEFDS_1621 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DEFDS_0113 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DEFDS_1003 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ddf03060]
D DEFDS_1753 secY; preprotein translocase subunit Y K03076 secY; preprotein translocase subunit SecY
D DEFDS_1785 secE; preprotein translocase subunit E K03073 secE; preprotein translocase subunit SecE
D DEFDS_0130 secG; preprotein translocase subunit G K03075 secG; preprotein translocase subunit SecG
D DEFDS_0094 secD; preprotein translocase subunit D K03072 secD; preprotein translocase subunit SecD
D DEFDS_0095 secF; preprotein translocase subunit F K03074 secF; preprotein translocase subunit SecF
D DEFDS_0093 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DEFDS_0349 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DEFDS_0046 secA; preprotein translocase, subunit A K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DEFDS_0255 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DEFDS_1340 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DEFDS_0987 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D DEFDS_2139 tatB; twin-arginine translocation system component TatB K03116 tatA; sec-independent protein translocase protein TatA
D DEFDS_2140 tatC; twin-arginine translocation system component TatC K03118 tatC; sec-independent protein translocase protein TatC
D DEFDS_0117 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DEFDS_1186 lipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ddf04122]
D DEFDS_2167 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1944 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1558 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1444 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DEFDS_1156 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DEFDS_1135 moaE; molybdopterin biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DEFDS_2141 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DEFDS_1122 moaD; molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D DEFDS_0466 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DEFDS_0070 conserved hypothetical protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DEFDS_1945 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DEFDS_0603 conserved hypothetical protein K03154 thiS; sulfur carrier protein
D DEFDS_1998 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D DEFDS_1999 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ddf03018]
D DEFDS_0201 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DEFDS_1520 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DEFDS_0659 ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DEFDS_1798 deaD; ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DEFDS_0096 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DEFDS_0481 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DEFDS_0408 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DEFDS_2114 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_1195 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_0240 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DEFDS_0146 small nuclear ribonucleoprotein K03666 hfq; host factor-I protein
D DEFDS_1085 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D DEFDS_0057 tRNA nucleotidyltransferase (CCA-adding enzyme) K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ddf03030]
D DEFDS_0125 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0623 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_1873 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_2002 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0888 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0141 DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DEFDS_0792 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DEFDS_0001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DEFDS_0034 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DEFDS_1487 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DEFDS_1988 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DEFDS_1483 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DEFDS_0181 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DEFDS_0530 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ddf03410]
D DEFDS_1641 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DEFDS_1865 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DEFDS_1425 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DEFDS_1407 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D DEFDS_0047 recJ; single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_P223 single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_0530 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ddf03420]
D DEFDS_0229 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DEFDS_0014 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D DEFDS_0663 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D DEFDS_1848 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DEFDS_1949 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DEFDS_0530 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ddf03430]
D DEFDS_2173 mutS; DNA mismatch repair ATPase MutS K03555 mutS; DNA mismatch repair protein MutS
D DEFDS_1585 DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DEFDS_1174 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DEFDS_1949 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DEFDS_1090 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DEFDS_0946 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DEFDS_0047 recJ; single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_P223 single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_1988 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DEFDS_2002 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0888 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DEFDS_0141 DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DEFDS_0792 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DEFDS_0125 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0623 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_1873 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0530 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ddf03440]
D DEFDS_0047 recJ; single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_P223 single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_1988 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DEFDS_0002 conserved hypothetical protein K03629 recF; DNA replication and repair protein RecF
D DEFDS_0143 recR; DNA recombination protein RecR K06187 recR; recombination protein RecR
D DEFDS_0038 recA; DNA recombination protein RecA K03553 recA; recombination protein RecA
D DEFDS_1659 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DEFDS_1809 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DEFDS_1660 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DEFDS_1215 recG; ATP-dependent DNA recombinase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DEFDS_0288 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DEFDS_0737 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DEFDS_0736 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DEFDS_0738 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DEFDS_2002 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0888 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DEFDS_0141 DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DEFDS_0792 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DEFDS_0125 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0623 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_1873 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_1551 priA; primosomal replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ddf02010]
D DEFDS_2180 sulfate/molybdate ABC transporter, substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D DEFDS_1696 conserved hypothetical protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D DEFDS_2178 sulfate/molybdate ABC transporter, permease K15496 wtpB; molybdate/tungstate transport system permease protein
D DEFDS_2179 sulfate/molybdate ABC transporter, ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D DEFDS_0825 molybdate ABC transporter, substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DEFDS_0826 molybdate ABC transporter, permease K02018 modB; molybdate transport system permease protein
D DEFDS_0824 molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DEFDS_1582 spermidine/putrescine ABC transporter, substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DEFDS_1579 spermidine/putrescine ABC transporter, permease K11070 potC; spermidine/putrescine transport system permease protein
D DEFDS_1580 spermidine/putrescine ABC transporter, permease K11071 potB; spermidine/putrescine transport system permease protein
D DEFDS_1581 spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D DEFDS_1121 ABC transporter, substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DEFDS_1477 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DEFDS_1119 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DEFDS_1479 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DEFDS_1120 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DEFDS_0976 conserved hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D DEFDS_0978 sugar ABC transporter, permease K23535 nupB; general nucleoside transport system permease protein
D DEFDS_0979 sugar ABC transporter, permease K23536 nupC; general nucleoside transport system permease protein
D DEFDS_0977 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DEFDS_0399 pstS; phosphate ABC transporter, substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DEFDS_0400 pstC; phosphate ABC transporter, permease K02037 pstC; phosphate transport system permease protein
D DEFDS_0401 pstA; phosphate ABC transporter, permease K02038 pstA; phosphate transport system permease protein
D DEFDS_0402 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DEFDS_0654 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1062 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0928 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0962 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1493 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1128 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0655 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_1063 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0961 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_1495 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0929 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0656 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_0960 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_1064 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_1494 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_0657 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1065 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1497 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0931 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0959 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0658 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0958 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1066 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1492 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_2068 peptide/nickel ABC transporter, substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D DEFDS_2067 peptide/nickel ABC transporter, permease K12369 dppB; dipeptide transport system permease protein
D DEFDS_2066 peptide/nickel ABC transporter, permease K12370 dppC; dipeptide transport system permease protein
D DEFDS_1940 zinc ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DEFDS_1938 zinc ABC transporter, permease K09816 znuB; zinc transport system permease protein
D DEFDS_1939 zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DEFDS_0031 cbiM; cobalt ABC transporter, permease K02007 cbiM; cobalt/nickel transport system permease protein
D DEFDS_0029 cbiQ; cobalt ABC transporter, permease K02008 cbiQ; cobalt/nickel transport system permease protein
D DEFDS_0028 cbiO; cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DEFDS_0032 cbiN; cobalt ABC transporter, substrate-binding protein K10094 cbiK; nickel transport protein
D DEFDS_0030 cbiL; cobalt ABC transporter, permease K16915 cbiL; nickel transport protein
D DEFDS_1258 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D DEFDS_0989 cobalt/nickel ABC transporter, permease K16785 ecfT; energy-coupling factor transport system permease protein
D DEFDS_0471 lipoprotein-releasing system permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DEFDS_0472 lipoprotein-releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DEFDS_0177 ccmC; heme exporter membrane protein K02195 ccmC; heme exporter protein C
D DEFDS_0176 ccmB; heme exporter membrane protein K02194 ccmB; heme exporter protein B
D DEFDS_0175 heme exporter ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D DEFDS_0631 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D DEFDS_0632 conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D DEFDS_1043 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DEFDS_1363 ftsX; cell division transport system permease protein K09811 ftsX; cell division transport system permease protein
D DEFDS_1362 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DEFDS_0328 ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:ddf02060]
D DEFDS_1054 ptsI; PTS system, enzyme I, phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DEFDS_1053 ptsH; PTS system, histidine-containing phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D DEFDS_1049 PTS system, fructose-specific enzyme II, A component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DEFDS_1052 conserved hypothetical protein K02796 manZ; mannose PTS system EIID component
D DEFDS_1051 conserved hypothetical protein K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D DEFDS_1046 PTS system, fructose-specific enzyme II, A component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ddf03070]
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_1308 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D DEFDS_1309 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D DEFDS_1306 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D DEFDS_1311 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D DEFDS_1315 hypothetical protein K02460 gspK; general secretion pathway protein K
D DEFDS_1307 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DEFDS_P021 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DEFDS_0094 secD; preprotein translocase subunit D K03072 secD; preprotein translocase subunit SecD
D DEFDS_0095 secF; preprotein translocase subunit F K03074 secF; preprotein translocase subunit SecF
D DEFDS_1785 secE; preprotein translocase subunit E K03073 secE; preprotein translocase subunit SecE
D DEFDS_0130 secG; preprotein translocase subunit G K03075 secG; preprotein translocase subunit SecG
D DEFDS_1753 secY; preprotein translocase subunit Y K03076 secY; preprotein translocase subunit SecY
D DEFDS_0093 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DEFDS_0349 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DEFDS_0046 secA; preprotein translocase, subunit A K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DEFDS_1340 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DEFDS_0255 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DEFDS_0987 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D DEFDS_2139 tatB; twin-arginine translocation system component TatB K03116 tatA; sec-independent protein translocase protein TatA
D DEFDS_2140 tatC; twin-arginine translocation system component TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ddf02020]
D DEFDS_0406 two-component system, OmpR family, sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DEFDS_1824 two-component system, OmpR family, response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DEFDS_0399 pstS; phosphate ABC transporter, substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DEFDS_1060 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_1022 serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_2020 flagellin domain protein K02406 fliC; flagellin
D DEFDS_2023 flagellin domain protein K02406 fliC; flagellin
D DEFDS_1797 flagellin K02406 fliC; flagellin
D DEFDS_0418 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_P100 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_1719 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D DEFDS_2181 dnaA; chromosome replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DEFDS_P211 hypothetical protein K02313 dnaA; chromosomal replication initiator protein
D DEFDS_0085 conserved hypothetical protein K18987 irr; two-component system, OmpR family, response regulator Irr
D DEFDS_0086 conserved hypothetical protein K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D DEFDS_0145 two-component response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D DEFDS_2089 narG; nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2088 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2086 narI; nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2087 narJ; nitrate reductase, delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D DEFDS_1857 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DEFDS_1475 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D DEFDS_1738 conserved hypothetical protein K04751 glnB; nitrogen regulatory protein P-II 1
D DEFDS_0661 two-component system, NtrC family, response regulator GlnL K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DEFDS_0660 two-component system, NtrC family, nitrogen regulation response regulator GlnG K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DEFDS_1474 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DEFDS_1011 conserved hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DEFDS_1012 two-component, sigma54 specific, transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DEFDS_2112 two-component system, NtrC family, sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DEFDS_1455 conserved hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DEFDS_2111 two-component system, NtrC family, transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DEFDS_1402 two-component system, NtrC family, response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DEFDS_0752 two-component system, NtrC family, response regulator AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DEFDS_0834 two-component, sigma54 specific, transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1112 conserved hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DEFDS_1092 two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D DEFDS_1044 sigL; DNA-directed RNA polymerase sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DEFDS_1270 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DEFDS_0077 Ni-Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D DEFDS_0076 Ni-Fe hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D DEFDS_0075 Ni-Fe hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D DEFDS_0431 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_1202 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_1209 conserved hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_2011 conserved hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0950 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0702 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0640 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0797 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0847 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1196 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1544 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1596 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_P172 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_P173 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1197 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_1214 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_0162 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_P182 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_0424 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1204 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_2008 conserved hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_P186 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_0422 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1200 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1203 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_P185 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_0419 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_1198 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_2009 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0701 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0276 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_P184 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_0163 hypothetical protein K02660 pilJ; twitching motility protein PilJ
D DEFDS_0164 conserved hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D DEFDS_0161 pilH; twitching motility two-component system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D DEFDS_0682 C4-dicarboxylate transporter, substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D DEFDS_1375 C4-dicarboxylate transporter, substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D DEFDS_0683 C4-dicarboxylate transporter, small subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D DEFDS_0684 C4-dicarboxylate transporter, large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DEFDS_0772 C4-dicarboxylate transporter, large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DEFDS_0233 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DEFDS_0849 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DEFDS_1619 cydA; cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DEFDS_1171 cytochrome c family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DEFDS_1620 cydB; cytochrome bd oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_2147 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ddf02024]
D DEFDS_0146 small nuclear ribonucleoprotein K03666 hfq; host factor-I protein
D DEFDS_1085 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D DEFDS_0438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DEFDS_0439 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DEFDS_0654 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1062 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0928 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0962 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1493 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1128 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0655 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_1063 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0961 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_1495 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0929 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0656 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_0960 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_1064 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_1494 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_0657 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1065 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1497 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0931 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0959 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0658 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0958 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1066 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1492 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1496 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1468 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0642 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0233 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DEFDS_0849 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DEFDS_1096 ribD; bifunctional riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DEFDS_1960 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D DEFDS_1909 RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DEFDS_0131 peptide/nickel ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DEFDS_0132 peptide/nickel ABC transporter, permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DEFDS_0133 peptide/nickel ABC transporter, permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DEFDS_1489 peptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DEFDS_2065 peptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DEFDS_2064 peptide/nickel ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DEFDS_0349 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DEFDS_1785 secE; preprotein translocase subunit E K03073 secE; preprotein translocase subunit SecE
D DEFDS_0130 secG; preprotein translocase subunit G K03075 secG; preprotein translocase subunit SecG
D DEFDS_1753 secY; preprotein translocase subunit Y K03076 secY; preprotein translocase subunit SecY
D DEFDS_0093 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DEFDS_0046 secA; preprotein translocase, subunit A K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DEFDS_1340 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DEFDS_0255 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DEFDS_0145 two-component response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ddf02030]
D DEFDS_0640 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0797 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0847 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1196 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1544 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1596 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_P172 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_P173 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_2068 peptide/nickel ABC transporter, substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D DEFDS_0424 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1204 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_2008 conserved hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_P186 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1197 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_1214 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_0162 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_P182 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_0422 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1200 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1203 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_P185 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_0111 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D DEFDS_P148 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D DEFDS_0419 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_1198 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_2009 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0701 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0276 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_P184 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_0431 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_1202 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_1209 conserved hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_2011 conserved hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0950 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0702 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0523 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DEFDS_0420 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DEFDS_0421 fliN; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D DEFDS_1719 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D DEFDS_1718 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ddf02040]
D DEFDS_0521 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DEFDS_0522 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DEFDS_0523 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DEFDS_0524 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D DEFDS_0525 fliI; flagellar-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DEFDS_0526 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D DEFDS_1722 fliK; hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D DEFDS_1717 fliL; flagellar FliL protein K02415 fliL; flagellar protein FliL
D DEFDS_0420 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DEFDS_0421 fliN; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D DEFDS_1715 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D DEFDS_1714 fliP; flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DEFDS_1713 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DEFDS_0412 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DEFDS_0414 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DEFDS_0413 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DEFDS_2151 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DEFDS_0519 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DEFDS_0520 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DEFDS_1721 flgD; flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D DEFDS_1720 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D DEFDS_2153 flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D DEFDS_2152 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DEFDS_1676 flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D DEFDS_2150 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D DEFDS_2149 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D DEFDS_2148 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D DEFDS_2145 flgK; flagellar hook-associated protein 1 FlgK K02396 flgK; flagellar hook-associated protein 1
D DEFDS_2020 flagellin domain protein K02406 fliC; flagellin
D DEFDS_2023 flagellin domain protein K02406 fliC; flagellin
D DEFDS_1797 flagellin K02406 fliC; flagellin
D DEFDS_0581 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D DEFDS_0582 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D DEFDS_1719 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D DEFDS_1718 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D DEFDS_2147 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DEFDS_1924 DNA-directed RNA polymerase sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DEFDS_1486 DNA-directed RNA polymerase sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DEFDS_0258 DNA-directed RNA polymerase sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DEFDS_1044 sigL; DNA-directed RNA polymerase sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DEFDS_0418 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_P100 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DEFDS_0201 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ddf04980]
D DEFDS_2075 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D DEFDS_1683 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ddf01501]
D DEFDS_1909 RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0662 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_0448 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_1161 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DEFDS_0590 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ddf01502]
D DEFDS_0598 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DEFDS_1118 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DEFDS_0592 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DEFDS_0593 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DEFDS_0596 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ddf01503]
D DEFDS_0015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DEFDS_1060 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_1022 serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0108 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ddf01000]
C 01001 Protein kinases [BR:ddf01001]
D DEFDS_P136 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DEFDS_0206 conserved hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D DEFDS_0406 two-component system, OmpR family, sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DEFDS_0086 conserved hypothetical protein K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D DEFDS_0661 two-component system, NtrC family, response regulator GlnL K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DEFDS_1011 conserved hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DEFDS_2112 two-component system, NtrC family, sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DEFDS_1455 conserved hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DEFDS_1112 conserved hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DEFDS_1386 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DEFDS_1403 conserved hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DEFDS_0953 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DEFDS_0424 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1204 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_2008 conserved hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_P186 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_0164 conserved hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
C 01009 Protein phosphatases and associated proteins [BR:ddf01009]
D DEFDS_1514 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:ddf01002]
D DEFDS_1186 lipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DEFDS_0112 pilD; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DEFDS_0074 hydrogenase expression/formation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D DEFDS_0470 guaA; GMP synthase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DEFDS_1603 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DEFDS_2137 ferredoxin-dependent glutamate synthase, alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DEFDS_1947 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DEFDS_2037 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D DEFDS_1310 conserved hypothetical protein K07052 K07052; CAAX protease family protein
D DEFDS_2072 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DEFDS_1849 carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D DEFDS_1751 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DEFDS_1140 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D DEFDS_1571 conserved hypothetical protein K19689 ampS; aminopeptidase [EC:3.4.11.-]
D DEFDS_1029 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DEFDS_1961 peptidase, M48 family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DEFDS_1995 htpX; peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DEFDS_0124 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DEFDS_1060 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_1022 serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_0193 clpP; ATP-dependent Clp protease, proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DEFDS_0195 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DEFDS_1706 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DEFDS_0476 SOS-response transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D DEFDS_0117 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DEFDS_1365 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DEFDS_2093 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D DEFDS_0217 rhomboid family protein K07059 K07059; rhomboid family protein
D DEFDS_2155 ATP-dependent protease HslVU, peptidase subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DEFDS_0773 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DEFDS_0529 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D DEFDS_1116 conserved hypothetical protein K03592 pmbA; PmbA protein
D DEFDS_1103 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein
D DEFDS_1536 hflC; membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D DEFDS_1535 hflK; membrane protease subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ddf01003]
D DEFDS_1901 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D DEFDS_0730 monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D DEFDS_0662 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_0448 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_1138 glycosyl transferase K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
D DEFDS_0171 conserved hypothetical protein K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ddf01005]
D DEFDS_0108 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DEFDS_1723 lpxB; lipid A disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DEFDS_0033 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DEFDS_0106 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DEFDS_0110 conserved hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DEFDS_0341 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DEFDS_0137 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DEFDS_1038 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DEFDS_1036 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DEFDS_1040 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DEFDS_1039 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DEFDS_0511 ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DEFDS_0228 glycerol-3-phosphate cytidyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DEFDS_0333 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DEFDS_1147 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DEFDS_0332 glycosyl transferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D DEFDS_0227 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DEFDS_0138 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DEFDS_0970 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddf01011]
D DEFDS_0102 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DEFDS_0475 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DEFDS_0597 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DEFDS_0594 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DEFDS_0591 murE; UDP-N-acetylmuramoylananine-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DEFDS_0598 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DEFDS_1118 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DEFDS_1793 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DEFDS_0593 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DEFDS_0596 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DEFDS_0409 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DEFDS_1422 mviN; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DEFDS_0662 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_0448 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DEFDS_1161 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DEFDS_0590 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DEFDS_1602 conserved hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DEFDS_0819 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DEFDS_1862 lytic transglycosylase, catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DEFDS_1020 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DEFDS_2081 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DEFDS_1409 conserved hypothetical protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D DEFDS_0015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ddf01004]
D DEFDS_0151 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DEFDS_0150 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DEFDS_0154 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DEFDS_2183 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0152 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0372 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0704 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DEFDS_0107 fabZ; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DEFDS_1807 fabI; enoyl-[acyl-carrier protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DEFDS_2074 acetyl-CoA synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_0854 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DEFDS_1496 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1468 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0642 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0569 acyl-CoA synthase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D DEFDS_0149 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DEFDS_1095 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DEFDS_1512 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ddf01006]
D DEFDS_0945 geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DEFDS_0648 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DEFDS_0121 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DEFDS_1175 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DEFDS_0320 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:ddf01007]
D DEFDS_1071 glnS; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D DEFDS_0113 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DEFDS_1003 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DEFDS_0838 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DEFDS_1359 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DEFDS_0066 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DEFDS_1185 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DEFDS_0507 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DEFDS_0790 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DEFDS_1155 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DEFDS_1552 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DEFDS_1553 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DEFDS_0639 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DEFDS_0236 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DEFDS_1957 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DEFDS_2069 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DEFDS_1504 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DEFDS_1463 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DEFDS_1622 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DEFDS_1621 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DEFDS_0619 aspC; aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DEFDS_1993 aminotransferase, I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DEFDS_2101 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DEFDS_1301 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DEFDS_2166 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DEFDS_0912 aminotransferase, I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DEFDS_1629 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DEFDS_1299 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DEFDS_1739 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DEFDS_1968 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DEFDS_0134 aminotransferase, DegT/DnrJ/EryC1/StrS family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DEFDS_0368 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ddf00194]
D DEFDS_0674 iron-sulfur protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D DEFDS_1885 atpC; F0F1-type ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DEFDS_1886 atpD; F0F1-type ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DEFDS_1887 atpG; F0F1-type ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DEFDS_1888 atpA; F0F1-type ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DEFDS_1889 atpH; F0F1-type ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DEFDS_1890 atpF; F0F1-type ATP synthase, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DEFDS_1891 atpF'; F0F1-type ATP synthase, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DEFDS_1734 atpE; hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DEFDS_1735 atpB; F0F1-type ATP synthase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DEFDS_1736 conserved hypothetical protein K02116 atpI; ATP synthase protein I
D DEFDS_1737 conserved hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ddf03000]
D DEFDS_2079 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D DEFDS_0933 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D DEFDS_1345 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DEFDS_1910 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D DEFDS_1282 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D DEFDS_0905 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DEFDS_1864 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DEFDS_1926 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D DEFDS_1838 transcriptional regulator, MerR family K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D DEFDS_1164 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D DEFDS_1567 peroxide stress regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D DEFDS_2106 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D DEFDS_0786 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D DEFDS_0233 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DEFDS_0849 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DEFDS_2168 transcriptional regulator, Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D DEFDS_0209 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D DEFDS_1113 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D DEFDS_1618 transcriptional regulator, Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D DEFDS_1673 transcriptional regulator, AsrR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DEFDS_1451 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DEFDS_0788 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D DEFDS_1285 transcriptional regulator, MntR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D DEFDS_1563 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DEFDS_P135 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D DEFDS_1941 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D DEFDS_1826 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D DEFDS_0303 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D DEFDS_0127 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DEFDS_P213 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DEFDS_1351 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D DEFDS_2116 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D DEFDS_2135 conserved hypothetical protein K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D DEFDS_2129 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D DEFDS_0842 pyrR; bifunctional pyrimidine biosynthesis protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DEFDS_0278 transcriptional regulator K07733 alpA; prophage regulatory protein
D DEFDS_1897 dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DEFDS_0587 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ddf03021]
D DEFDS_1745 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DEFDS_1779 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DEFDS_1778 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DEFDS_1427 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DEFDS_1924 DNA-directed RNA polymerase sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DEFDS_1486 DNA-directed RNA polymerase sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DEFDS_0258 DNA-directed RNA polymerase sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D DEFDS_1044 sigL; DNA-directed RNA polymerase sigma 54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DEFDS_0418 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_P100 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_1527 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D DEFDS_1100 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D DEFDS_1784 nusG; transcriptional antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DEFDS_0428 conserved hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DEFDS_1644 conserved hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DEFDS_0079 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DEFDS_0205 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DEFDS_0951 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DEFDS_P180 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D DEFDS_0206 conserved hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D DEFDS_0306 conserved hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D DEFDS_1962 sigma-E factor negative regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D DEFDS_1897 dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DEFDS_1091 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D DEFDS_0096 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ddf03019]
D DEFDS_0023 ribonuclease E and G K08301 rng; ribonuclease G [EC:3.1.26.-]
D DEFDS_0155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DEFDS_0408 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DEFDS_0481 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DEFDS_0659 ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DEFDS_1104 HAD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D DEFDS_1798 deaD; ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DEFDS_0201 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DEFDS_1520 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DEFDS_0096 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DEFDS_0940 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DEFDS_2114 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_1195 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_0240 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DEFDS_0146 small nuclear ribonucleoprotein K03666 hfq; host factor-I protein
D DEFDS_1085 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D DEFDS_0057 tRNA nucleotidyltransferase (CCA-adding enzyme) K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DEFDS_1048 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:ddf03011]
D DEFDS_2095 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DEFDS_0051 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DEFDS_1766 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DEFDS_1746 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DEFDS_1755 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DEFDS_1987 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DEFDS_1776 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DEFDS_1758 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DEFDS_0248 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DEFDS_1773 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DEFDS_1747 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DEFDS_1777 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DEFDS_1748 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DEFDS_1759 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DEFDS_1521 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DEFDS_0254 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DEFDS_1763 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DEFDS_1989 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DEFDS_1768 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DEFDS_1532 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DEFDS_0196 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DEFDS_1782 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DEFDS_1769 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DEFDS_1772 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DEFDS_1771 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DEFDS_1760 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DEFDS_1757 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DEFDS_0035 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DEFDS_1781 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DEFDS_1783 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DEFDS_1780 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DEFDS_0249 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DEFDS_1762 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DEFDS_1754 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DEFDS_1765 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DEFDS_1744 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DEFDS_1756 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DEFDS_0250 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DEFDS_1501 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DEFDS_0265 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DEFDS_1767 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DEFDS_1770 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DEFDS_1761 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DEFDS_0266 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DEFDS_0316 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DEFDS_1764 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DEFDS_0097 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DEFDS_0148 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DEFDS_1786 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DEFDS_0346 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DEFDS_1502 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DEFDS_1749 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DEFDS_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DEFDS_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DEFDS_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DEFDS_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DEFDS_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DEFDS_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ddf03009]
D DEFDS_0155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DEFDS_1082 era; GTP-binding protein Era K03595 era; GTPase
D DEFDS_0267 obg; GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D DEFDS_1897 dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DEFDS_1527 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D DEFDS_1100 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D DEFDS_1784 nusG; transcriptional antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DEFDS_1874 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DEFDS_1153 conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DEFDS_1996 tRNA/rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DEFDS_0157 DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DEFDS_1371 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DEFDS_0972 tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D DEFDS_0008 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DEFDS_0588 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DEFDS_0501 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DEFDS_1958 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DEFDS_0943 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D DEFDS_2175 RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DEFDS_0022 ftsJ; cell division protein methyltransferase FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DEFDS_1898 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DEFDS_1569 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DEFDS_0948 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DEFDS_0222 trmA; tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DEFDS_1986 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DEFDS_1595 ribosomal large subunit pseudouridine synthase A K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DEFDS_1517 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DEFDS_0252 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D DEFDS_1954 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DEFDS_1373 conserved hypothetical protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DEFDS_1417 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DEFDS_0023 ribonuclease E and G K08301 rng; ribonuclease G [EC:3.1.26.-]
D DEFDS_1798 deaD; ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DEFDS_1072 small GTP-binding protein K03977 engA; GTPase
D DEFDS_1593 small GTP-binding protein K03665 hflX; GTPase
D DEFDS_1190 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DEFDS_0048 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DEFDS_1523 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DEFDS_1528 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D DEFDS_1380 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D DEFDS_1079 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D DEFDS_1045 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D DEFDS_0464 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D DEFDS_0147 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ddf03016]
D DEFDS_1404 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D DEFDS_1077 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DEFDS_P129 conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DEFDS_2069 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DEFDS_1185 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DEFDS_0790 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DEFDS_0066 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DEFDS_1359 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DEFDS_1155 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DEFDS_1552 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DEFDS_1463 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DEFDS_1504 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DEFDS_1957 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DEFDS_0838 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DEFDS_0507 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DEFDS_1553 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DEFDS_1622 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DEFDS_1621 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DEFDS_0113 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DEFDS_1003 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DEFDS_1421 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DEFDS_1906 histidine triad family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DEFDS_0605 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D DEFDS_0801 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DEFDS_0990 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DEFDS_1522 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DEFDS_2167 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1944 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1558 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1190 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DEFDS_1175 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DEFDS_0006 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DEFDS_0007 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DEFDS_0345 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DEFDS_0347 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DEFDS_n02 bacterial RNase P class B K01978 rnpB; M1 RNA
D DEFDS_0446 rph; tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DEFDS_0039 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D DEFDS_0639 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DEFDS_0236 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DEFDS_1071 glnS; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D DEFDS_1370 CMP/dCMP deaminase, zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DEFDS_1368 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DEFDS_1391 miaB; tRNA-i(6)A37 thiotransferase enzyme K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DEFDS_1859 conserved hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DEFDS_1802 glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DEFDS_0251 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DEFDS_1378 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DEFDS_1156 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DEFDS_0604 conserved hypothetical protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D DEFDS_1458 hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DEFDS_0091 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DEFDS_0939 transcriptional regulator, ExsB family K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DEFDS_1007 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DEFDS_1008 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DEFDS_1431 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D DEFDS_2080 rhodanese domain protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D DEFDS_0092 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DEFDS_1945 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DEFDS_1027 cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DEFDS_1518 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DEFDS_1367 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DEFDS_0509 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DEFDS_0659 ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DEFDS_1520 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ddf03012]
D DEFDS_1525 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DEFDS_1503 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DEFDS_1799 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DEFDS_0050 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DEFDS_1774 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DEFDS_1787 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DEFDS_1534 translation elongation factor G K02355 fusA; elongation factor G
D DEFDS_1775 translation elongation factor G K02355 fusA; elongation factor G
D DEFDS_0272 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D DEFDS_0100 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D DEFDS_0120 frr; ribosome recycling factor Frr K02838 frr; ribosome recycling factor
D DEFDS_0101 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DEFDS_0462 pth; peptidyl-tRNA hydrolase, PTH1 family K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DEFDS_1750 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DEFDS_0455 efp; translation elongation factor P K02356 efp; elongation factor P
D DEFDS_1117 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:ddf03110]
D DEFDS_1925 clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DEFDS_2127 clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DEFDS_0194 clpX; ATP-dependent Clp protease, ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DEFDS_2156 ATP-dependent protease HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DEFDS_2114 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_1195 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_0240 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DEFDS_2113 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DEFDS_1927 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DEFDS_2115 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D DEFDS_1928 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D DEFDS_1576 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D DEFDS_1707 small heat shock protein, class I K13993 HSP20; HSP20 family protein
D DEFDS_0239 groES; chaperonin GroES K04078 groES; chaperonin GroES
D DEFDS_1060 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_1022 serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D DEFDS_1029 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DEFDS_1735 atpB; F0F1-type ATP synthase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DEFDS_0183 hydrogenase expression/synthesis protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DEFDS_0182 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D DEFDS_1625 cytoplasmic chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D DEFDS_1056 peptidyl-prolyl cis-trans isomerse D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DEFDS_0971 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D DEFDS_0230 conserved hypothetical protein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D DEFDS_0231 peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DEFDS_1167 thioredoxin K03671 TXN; thioredoxin
D DEFDS_1184 conserved hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:ddf04131]
D DEFDS_0089 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DEFDS_1355 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ddf03032]
D DEFDS_1483 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DEFDS_0256 conserved hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D DEFDS_0966 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DEFDS_P228 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DEFDS_1191 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DEFDS_1423 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DEFDS_2181 dnaA; chromosome replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DEFDS_P211 hypothetical protein K02313 dnaA; chromosomal replication initiator protein
D DEFDS_0034 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DEFDS_1487 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DEFDS_1988 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DEFDS_2002 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0888 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DEFDS_0792 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DEFDS_0125 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0623 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_1873 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0141 DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DEFDS_0181 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DEFDS_0530 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DEFDS_0004 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DEFDS_P199 DNA topoisomerase II, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DEFDS_0003 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DEFDS_P194 DNA topoisomerase II, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DEFDS_1803 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DEFDS_P008 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DEFDS_P014 hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ddf03036]
D DEFDS_0155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DEFDS_0966 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DEFDS_P228 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DEFDS_1191 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DEFDS_1423 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DEFDS_2181 dnaA; chromosome replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DEFDS_P211 hypothetical protein K02313 dnaA; chromosomal replication initiator protein
D DEFDS_0146 small nuclear ribonucleoprotein K03666 hfq; host factor-I protein
D DEFDS_1085 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D DEFDS_1864 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DEFDS_1341 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D DEFDS_1004 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D DEFDS_1005 chromosome segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B
D DEFDS_0600 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DEFDS_1362 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DEFDS_0590 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DEFDS_0410 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DEFDS_0595 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DEFDS_1363 ftsX; cell division transport system permease protein K09811 ftsX; cell division transport system permease protein
D DEFDS_0601 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DEFDS_0478 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D DEFDS_1500 conserved hypothetical protein K06916 zapE; cell division protein ZapE
D DEFDS_0015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DEFDS_1158 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DEFDS_1159 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DEFDS_1162 cell shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D DEFDS_0126 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D DEFDS_1194 chromosome partitioning protein, ParA family K03496 parA; chromosome partitioning protein
D DEFDS_P212 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D DEFDS_0127 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DEFDS_P213 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DEFDS_0007 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DEFDS_0008 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DEFDS_1802 glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DEFDS_1801 tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D DEFDS_1076 xerD; site-specific DNA tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DEFDS_P066 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D DEFDS_1268 ATP-binding protein, CobQ/CobB/MinD/ParA family K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DEFDS_1843 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ddf03400]
D DEFDS_0223 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DEFDS_1641 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DEFDS_1865 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DEFDS_P060 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DEFDS_1519 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DEFDS_1425 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DEFDS_1407 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D DEFDS_0855 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D DEFDS_0047 recJ; single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_P223 single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DEFDS_0530 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DEFDS_0014 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D DEFDS_0663 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D DEFDS_1848 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DEFDS_1949 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DEFDS_1779 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DEFDS_1778 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DEFDS_1745 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DEFDS_1427 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DEFDS_0229 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DEFDS_2173 mutS; DNA mismatch repair ATPase MutS K03555 mutS; DNA mismatch repair protein MutS
D DEFDS_1585 DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DEFDS_1174 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DEFDS_1090 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DEFDS_0946 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DEFDS_2002 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0888 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DEFDS_0001 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DEFDS_0792 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DEFDS_0125 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0623 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_1873 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DEFDS_0141 DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DEFDS_1988 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DEFDS_0737 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DEFDS_0736 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DEFDS_0738 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DEFDS_0038 recA; DNA recombination protein RecA K03553 recA; recombination protein RecA
D DEFDS_1659 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DEFDS_1809 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DEFDS_1660 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DEFDS_1551 priA; primosomal replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DEFDS_1808 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DEFDS_0002 conserved hypothetical protein K03629 recF; DNA replication and repair protein RecF
D DEFDS_1215 recG; ATP-dependent DNA recombinase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DEFDS_0288 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DEFDS_0143 recR; DNA recombination protein RecR K06187 recR; recombination protein RecR
D DEFDS_1599 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DEFDS_0556 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D DEFDS_0004 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DEFDS_P199 DNA topoisomerase II, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DEFDS_0003 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DEFDS_P194 DNA topoisomerase II, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DEFDS_1803 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DEFDS_P008 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DEFDS_P014 hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DEFDS_0966 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DEFDS_P228 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D DEFDS_1191 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DEFDS_1423 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DEFDS_0477 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DEFDS_0476 SOS-response transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D DEFDS_0036 regulatory protein recX K03565 recX; regulatory protein
D DEFDS_1013 DNA polymerase, family X K02347 polX; DNA polymerase (family X)
D DEFDS_1169 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DEFDS_P214 ribonucleotide reductase, large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ddf03029]
D DEFDS_1525 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DEFDS_1503 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DEFDS_0050 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DEFDS_1774 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DEFDS_1787 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DEFDS_1534 translation elongation factor G K02355 fusA; elongation factor G
D DEFDS_1775 translation elongation factor G K02355 fusA; elongation factor G
D DEFDS_1082 era; GTP-binding protein Era K03595 era; GTPase
D DEFDS_0113 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DEFDS_0790 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DEFDS_1552 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DEFDS_1359 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DEFDS_1951 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DEFDS_1934 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DEFDS_1950 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DEFDS_0256 conserved hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D DEFDS_1988 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D DEFDS_0017 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D DEFDS_0104 conserved hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D DEFDS_2114 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_1195 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_2115 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D DEFDS_0240 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DEFDS_0239 groES; chaperonin GroES K04078 groES; chaperonin GroES
D DEFDS_2113 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DEFDS_1927 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DEFDS_2167 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1944 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1558 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1268 ATP-binding protein, CobQ/CobB/MinD/ParA family K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DEFDS_0349 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ddf02000]
D DEFDS_0328 ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DEFDS_0825 molybdate ABC transporter, substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DEFDS_0826 molybdate ABC transporter, permease K02018 modB; molybdate transport system permease protein
D DEFDS_0824 molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DEFDS_2180 sulfate/molybdate ABC transporter, substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D DEFDS_1696 conserved hypothetical protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D DEFDS_2178 sulfate/molybdate ABC transporter, permease K15496 wtpB; molybdate/tungstate transport system permease protein
D DEFDS_2179 sulfate/molybdate ABC transporter, ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D DEFDS_1582 spermidine/putrescine ABC transporter, substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DEFDS_1579 spermidine/putrescine ABC transporter, permease K11070 potC; spermidine/putrescine transport system permease protein
D DEFDS_1580 spermidine/putrescine ABC transporter, permease K11071 potB; spermidine/putrescine transport system permease protein
D DEFDS_1581 spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D DEFDS_0976 conserved hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D DEFDS_0978 sugar ABC transporter, permease K23535 nupB; general nucleoside transport system permease protein
D DEFDS_0979 sugar ABC transporter, permease K23536 nupC; general nucleoside transport system permease protein
D DEFDS_0977 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DEFDS_1870 ABC transporter, permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D DEFDS_1869 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D DEFDS_1121 ABC transporter, substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DEFDS_1477 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DEFDS_1119 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DEFDS_1479 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DEFDS_1120 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DEFDS_0399 pstS; phosphate ABC transporter, substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D DEFDS_0400 pstC; phosphate ABC transporter, permease K02037 pstC; phosphate transport system permease protein
D DEFDS_0401 pstA; phosphate ABC transporter, permease K02038 pstA; phosphate transport system permease protein
D DEFDS_0402 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DEFDS_0654 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1062 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0928 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0962 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1493 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_1128 branched-chain amino acid ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DEFDS_0655 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_1063 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0961 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_1495 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0929 branched-chain amino acid ABC transporter, permease K01997 livH; branched-chain amino acid transport system permease protein
D DEFDS_0656 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_0960 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_1064 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_1494 branched-chain amino acid ABC transporter, permease K01998 livM; branched-chain amino acid transport system permease protein
D DEFDS_0657 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1065 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1497 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0931 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0959 branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0658 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_0958 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1066 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1492 branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DEFDS_1508 ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D DEFDS_1507 ABC transporter, permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D DEFDS_1506 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D DEFDS_1238 polar amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DEFDS_2028 amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DEFDS_1237 polar amino acid ABC transporter, permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DEFDS_1239 polar amino acid ABC transporter, permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DEFDS_2027 amino acid ABC transporter, permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D DEFDS_2026 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DEFDS_2068 peptide/nickel ABC transporter, substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D DEFDS_2067 peptide/nickel ABC transporter, permease K12369 dppB; dipeptide transport system permease protein
D DEFDS_2066 peptide/nickel ABC transporter, permease K12370 dppC; dipeptide transport system permease protein
D DEFDS_0131 peptide/nickel ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DEFDS_0132 peptide/nickel ABC transporter, permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DEFDS_0133 peptide/nickel ABC transporter, permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DEFDS_1489 peptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DEFDS_2065 peptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DEFDS_2064 peptide/nickel ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DEFDS_2057 iron ABC transporter, substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D DEFDS_0533 iron ABC transporter, substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D DEFDS_2059 iron ABC transporter, permease K25027 btuC; cobalamin transport system permease protein
D DEFDS_0535 iron ABC transporter, permease K25027 btuC; cobalamin transport system permease protein
D DEFDS_2058 iron ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D DEFDS_0536 iron ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D DEFDS_1940 zinc ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D DEFDS_1938 zinc ABC transporter, permease K09816 znuB; zinc transport system permease protein
D DEFDS_1939 zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DEFDS_0029 cbiQ; cobalt ABC transporter, permease K02008 cbiQ; cobalt/nickel transport system permease protein
D DEFDS_0031 cbiM; cobalt ABC transporter, permease K02007 cbiM; cobalt/nickel transport system permease protein
D DEFDS_0028 cbiO; cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DEFDS_0032 cbiN; cobalt ABC transporter, substrate-binding protein K10094 cbiK; nickel transport protein
D DEFDS_0030 cbiL; cobalt ABC transporter, permease K16915 cbiL; nickel transport protein
D DEFDS_1258 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D DEFDS_0989 cobalt/nickel ABC transporter, permease K16785 ecfT; energy-coupling factor transport system permease protein
D DEFDS_0631 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D DEFDS_0632 conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D DEFDS_1043 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DEFDS_1541 ABC transporter, permease K25151 gldF; gliding motility-associated transport system permease protein
D DEFDS_1540 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D DEFDS_1542 ABC transporter, substrate-binding protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D DEFDS_1589 multidrug ABC transporter, permease K25181 ybhS; drug efflux transport system permease protein
D DEFDS_1588 multidrug ABC transporter, ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D DEFDS_1587 conserved hypothetical protein K25183 ybhG; membrane fusion protein YbhG
D DEFDS_0471 lipoprotein-releasing system permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DEFDS_0472 lipoprotein-releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DEFDS_0177 ccmC; heme exporter membrane protein K02195 ccmC; heme exporter protein C
D DEFDS_0176 ccmB; heme exporter membrane protein K02194 ccmB; heme exporter protein B
D DEFDS_0175 heme exporter ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D DEFDS_1363 ftsX; cell division transport system permease protein K09811 ftsX; cell division transport system permease protein
D DEFDS_1362 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DEFDS_1590 multidrug ABC transporter, permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D DEFDS_2063 ABC transporter, permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D DEFDS_1272 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DEFDS_2062 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DEFDS_1742 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DEFDS_1876 ABC transporter, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DEFDS_1877 ABC transporter, ATP-binding subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DEFDS_0807 multidrug resistance protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D DEFDS_1440 conserved hypothetical protein K22734 ANKH; progressive ankylosis protein
D DEFDS_2085 narK; nitrate/nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DEFDS_2091 narU; nitrate/nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DEFDS_0617 multidrug-efflux transporter, MFS family K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DEFDS_1626 multidrug-efflux transporter, MFS family K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D DEFDS_1054 ptsI; PTS system, enzyme I, phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DEFDS_1053 ptsH; PTS system, histidine-containing phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D DEFDS_1049 PTS system, fructose-specific enzyme II, A component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DEFDS_1052 conserved hypothetical protein K02796 manZ; mannose PTS system EIID component
D DEFDS_1051 conserved hypothetical protein K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D DEFDS_1046 PTS system, fructose-specific enzyme II, A component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DEFDS_1441 potassium channel protein K10716 kch; voltage-gated potassium channel
D DEFDS_0999 potassium channel protein K10716 kch; voltage-gated potassium channel
D DEFDS_0082 ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family
D DEFDS_1415 ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family
D DEFDS_1276 mechanosensitive ion channel, MscS family K03442 mscS; small conductance mechanosensitive channel
D DEFDS_1278 mechanosensitive ion channel, MscS family K16052 ynaI; MscS family membrane protein
D DEFDS_1083 magnesium transporter K06213 mgtE; magnesium transporter
D DEFDS_1719 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D DEFDS_1718 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D DEFDS_1265 biopolymer transport protein, ExbB/TolQ family K03561 exbB; biopolymer transport protein ExbB
D DEFDS_1264 biopolymer transport protein, ExbD/TolR family K03559 exbD; biopolymer transport protein ExbD
D DEFDS_0609 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D DEFDS_1081 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DEFDS_1469 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D DEFDS_0532 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_1909 RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DEFDS_0017 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D DEFDS_0104 conserved hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D DEFDS_1955 conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D DEFDS_2144 conserved hypothetical protein K21449 ata; trimeric autotransporter adhesin
D DEFDS_1042 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D DEFDS_0577 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D DEFDS_0562 LrgA family protein K06518 cidA; holin-like protein
D DEFDS_1992 cation efflux protein K13283 fieF; ferrous-iron efflux pump FieF
D DEFDS_0513 zinc transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D DEFDS_0955 drug/metabolite transporter, DME family K03298 TC.DME; drug/metabolite transporter, DME family
D DEFDS_0927 chloramphenicol-sensitive protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D DEFDS_1960 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D DEFDS_2094 Ca2+:cation antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D DEFDS_1574 solute:sodium symporter K14393 actP; cation/acetate symporter
D DEFDS_1322 nhaA; Na+:H+ antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family
D DEFDS_2160 nhaB; Na+:H+ antiporter NhaB family K03314 nhaB; Na+:H+ antiporter, NhaB family
D DEFDS_0570 K+ transport (Trk) system, membrane component K03498 trkH; trk/ktr system potassium uptake protein
D DEFDS_1538 K+ transport (Trk) system, membrane component K03498 trkH; trk/ktr system potassium uptake protein
D DEFDS_0571 K+ transport (Trk) system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D DEFDS_1537 K+ transport (Trk) system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D DEFDS_1105 pyrP; uracil transporter K02824 uraA; uracil permease
D DEFDS_1948 chloride channel protein, CIC family K03281 clcA; chloride channel protein, CIC family
D DEFDS_1871 chloride channel protein, CIC family K03281 clcA; chloride channel protein, CIC family
D DEFDS_0682 C4-dicarboxylate transporter, substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D DEFDS_1375 C4-dicarboxylate transporter, substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D DEFDS_0683 C4-dicarboxylate transporter, small subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D DEFDS_0684 C4-dicarboxylate transporter, large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DEFDS_0772 C4-dicarboxylate transporter, large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D DEFDS_0771 C4-dicarboxylate transporter, small subunit K21394 yiaM; TRAP-type transport system small permease protein
D DEFDS_0770 C4-dicarboxylate transporter, substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D DEFDS_0081 Na:phosphate symporter K03324 yjbB; phosphate:Na+ symporter
D DEFDS_1453 arsenic efflux pump protein, ACR3 family K03325 ACR3; arsenite transporter
D DEFDS_1422 mviN; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DEFDS_0071 conserved hypothetical protein K24180 mleP; malate permease and related proteins
D DEFDS_1395 auxin efflux carrier K24180 mleP; malate permease and related proteins
D DEFDS_0775 lysine exporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DEFDS_0726 multiple antibiotic transporter, MarC family K05595 marC; multiple antibiotic resistance protein
D DEFDS_0595 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DEFDS_1280 conserved hypothetical protein K23242 mntP; manganese efflux pump family protein
D DEFDS_0706 high-affinity iron transporter K07243 FTR; high-affinity iron transporter
D DEFDS_1460 hypothetical protein K03832 tonB; periplasmic protein TonB
D DEFDS_0463 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D DEFDS_0172 ccdA; cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D DEFDS_2089 narG; nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2088 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_2086 narI; nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DEFDS_0670 molybdopterin oxidoreductase, molybdopterin-binding subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DEFDS_1699 molybdopterin oxidoreductase, molybdopterin-binding subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D DEFDS_0616 multidrug-efflux transporter, MFP family K03543 emrA; membrane fusion protein, multidrug efflux system
D DEFDS_0436 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D DEFDS_0437 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D DEFDS_0174 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:ddf02044]
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_1249 conserved hypothetical protein K02450 gspA; general secretion pathway protein A
D DEFDS_1010 general secretion pathway protein A K02450 gspA; general secretion pathway protein A
D DEFDS_1309 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D DEFDS_1308 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D DEFDS_1307 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DEFDS_P021 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DEFDS_1306 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D DEFDS_1311 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D DEFDS_1315 hypothetical protein K02460 gspK; general secretion pathway protein K
D DEFDS_0112 pilD; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DEFDS_1270 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DEFDS_1109 type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D DEFDS_1256 type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D DEFDS_1111 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DEFDS_P022 general secretory pathway protein F K02653 pilC; type IV pilus assembly protein PilC
D DEFDS_1561 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D DEFDS_0161 pilH; twitching motility two-component system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D DEFDS_0163 hypothetical protein K02660 pilJ; twitching motility protein PilJ
D DEFDS_1728 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DEFDS_1727 conserved hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D DEFDS_1726 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D DEFDS_1725 conserved hypothetical protein K02665 pilP; type IV pilus assembly protein PilP
D DEFDS_1724 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D DEFDS_1255 type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DEFDS_0625 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DEFDS_0037 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DEFDS_1110 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DEFDS_P058 twitching motility protein K02669 pilT; twitching motility protein PilT
D DEFDS_0859 conserved hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D DEFDS_0862 conserved hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D DEFDS_1247 conserved hypothetical protein K10927 mshD; MSHA pilin protein MshD
D DEFDS_1244 general secretion pathway protein F K12278 mshG; MSHA biogenesis protein MshG
D DEFDS_1254 conserved hypothetical protein K12281 mshK; MSHA biogenesis protein MshK
D DEFDS_P017 hypothetical protein K12282 mshL; MSHA biogenesis protein MshL
D DEFDS_1248 hypothetical protein K12285 mshO; MSHA biogenesis protein MshO
D DEFDS_1152 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ
D DEFDS_0998 conserved hypothetical protein K02221 yggT; YggT family protein
D DEFDS_0356 DNA uptake protein K02237 comEA; competence protein ComEA
D DEFDS_0486 CMP/dCMP deaminase, zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DEFDS_2000 conserved hypothetical protein K02238 comEC; competence protein ComEC
D DEFDS_1970 conserved hypothetical protein K02241 comFB; competence protein ComFB
D DEFDS_P007 conserved hypothetical protein K02241 comFB; competence protein ComFB
D DEFDS_P161 conserved hypothetical protein K02241 comFB; competence protein ComFB
D DEFDS_0414 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DEFDS_0413 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DEFDS_2014 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D DEFDS_0522 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DEFDS_0524 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D DEFDS_0525 fliI; flagellar-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DEFDS_0421 fliN; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D DEFDS_1715 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D DEFDS_1714 fliP; flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DEFDS_1713 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DEFDS_0412 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DEFDS_P032 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC
D DEFDS_1184 conserved hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DEFDS_P029 hypothetical protein K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8]
D DEFDS_0046 secA; preprotein translocase, subunit A K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DEFDS_0094 secD; preprotein translocase subunit D K03072 secD; preprotein translocase subunit SecD
D DEFDS_1785 secE; preprotein translocase subunit E K03073 secE; preprotein translocase subunit SecE
D DEFDS_0095 secF; preprotein translocase subunit F K03074 secF; preprotein translocase subunit SecF
D DEFDS_0130 secG; preprotein translocase subunit G K03075 secG; preprotein translocase subunit SecG
D DEFDS_1753 secY; preprotein translocase subunit Y K03076 secY; preprotein translocase subunit SecY
D DEFDS_0255 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DEFDS_1340 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DEFDS_0093 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D DEFDS_0349 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DEFDS_0987 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D DEFDS_2139 tatB; twin-arginine translocation system component TatB K03116 tatA; sec-independent protein translocase protein TatA
D DEFDS_2140 tatC; twin-arginine translocation system component TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ddf02042]
D DEFDS_1081 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DEFDS_1149 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ddf02022]
D DEFDS_0406 two-component system, OmpR family, sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DEFDS_1824 two-component system, OmpR family, response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DEFDS_0085 conserved hypothetical protein K18987 irr; two-component system, OmpR family, response regulator Irr
D DEFDS_1385 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DEFDS_0086 conserved hypothetical protein K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D DEFDS_0145 two-component response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D DEFDS_0661 two-component system, NtrC family, response regulator GlnL K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DEFDS_0660 two-component system, NtrC family, nitrogen regulation response regulator GlnG K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DEFDS_1011 conserved hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DEFDS_1012 two-component, sigma54 specific, transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DEFDS_2112 two-component system, NtrC family, sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DEFDS_1455 conserved hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DEFDS_2111 two-component system, NtrC family, transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DEFDS_1402 two-component system, NtrC family, response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DEFDS_0752 two-component system, NtrC family, response regulator AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DEFDS_0834 two-component, sigma54 specific, transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DEFDS_1112 conserved hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DEFDS_1092 two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D DEFDS_1386 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DEFDS_1403 conserved hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DEFDS_0953 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DEFDS_0424 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1204 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_2008 conserved hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_P186 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_0422 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1200 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1203 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_P185 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_0419 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_1198 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_2009 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0701 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0276 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_P184 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_0164 conserved hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D DEFDS_0161 pilH; twitching motility two-component system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
C 02035 Bacterial motility proteins [BR:ddf02035]
D DEFDS_0424 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1204 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_2008 conserved hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_P186 two-component system, chemotaxis family, sensor kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DEFDS_1197 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_1214 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_0162 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_P182 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DEFDS_0111 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D DEFDS_P148 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D DEFDS_0431 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_1202 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_1209 conserved hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_2011 conserved hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0950 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0702 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DEFDS_0419 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_1198 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_2009 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0701 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DEFDS_0422 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1200 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_1203 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_P185 two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DEFDS_0276 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_P184 two-component system, chemotaxis family, response regulator CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D DEFDS_0640 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0797 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0847 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1196 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1544 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1596 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_1855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_P172 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_P173 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DEFDS_0524 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D DEFDS_0525 fliI; flagellar-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DEFDS_0526 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D DEFDS_1715 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D DEFDS_1714 fliP; flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DEFDS_1713 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DEFDS_0412 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DEFDS_0414 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DEFDS_0413 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DEFDS_0523 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DEFDS_0420 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DEFDS_0421 fliN; flagellar motor switch protein FliN/FliY K02417 fliN; flagellar motor switch protein FliN
D DEFDS_0522 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DEFDS_2149 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D DEFDS_2151 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DEFDS_2150 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D DEFDS_1717 fliL; flagellar FliL protein K02415 fliL; flagellar protein FliL
D DEFDS_0521 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DEFDS_1722 fliK; hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D DEFDS_0519 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DEFDS_0520 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DEFDS_1721 flgD; flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D DEFDS_2153 flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D DEFDS_2152 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DEFDS_1676 flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D DEFDS_2148 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D DEFDS_1720 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D DEFDS_2145 flgK; flagellar hook-associated protein 1 FlgK K02396 flgK; flagellar hook-associated protein 1
D DEFDS_2020 flagellin domain protein K02406 fliC; flagellin
D DEFDS_2023 flagellin domain protein K02406 fliC; flagellin
D DEFDS_1797 flagellin K02406 fliC; flagellin
D DEFDS_0581 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D DEFDS_0582 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D DEFDS_0418 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_P100 RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D DEFDS_1719 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D DEFDS_1718 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D DEFDS_2143 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D DEFDS_2147 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DEFDS_2019 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D DEFDS_0415 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D DEFDS_0211 hypothetical protein K04562 flhG; flagellar biosynthesis protein FlhG
D DEFDS_0416 flhG; flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D DEFDS_1704 flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D DEFDS_0161 pilH; twitching motility two-component system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D DEFDS_0163 hypothetical protein K02660 pilJ; twitching motility protein PilJ
D DEFDS_0164 conserved hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D DEFDS_1092 two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D DEFDS_1112 conserved hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DEFDS_0625 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DEFDS_0037 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DEFDS_1110 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D DEFDS_P058 twitching motility protein K02669 pilT; twitching motility protein PilT
D DEFDS_1270 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DEFDS_1109 type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D DEFDS_1256 type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D DEFDS_1111 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DEFDS_P022 general secretory pathway protein F K02653 pilC; type IV pilus assembly protein PilC
D DEFDS_0112 pilD; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DEFDS_1561 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D DEFDS_1724 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D DEFDS_1255 type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DEFDS_1725 conserved hypothetical protein K02665 pilP; type IV pilus assembly protein PilP
D DEFDS_1726 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D DEFDS_1727 conserved hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D DEFDS_1728 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DEFDS_0859 conserved hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D DEFDS_0862 conserved hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ddf04812]
D DEFDS_1709 conserved hypothetical protein K06990 MEMO1; MEMO1 family protein
D DEFDS_1158 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DEFDS_0874 conserved hypothetical protein K18640 parM; plasmid segregation protein ParM
D DEFDS_P232 hypothetical protein K18640 parM; plasmid segregation protein ParM
D DEFDS_0601 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DEFDS_0600 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DEFDS_0126 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D DEFDS_1194 chromosome partitioning protein, ParA family K03496 parA; chromosome partitioning protein
D DEFDS_P212 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D DEFDS_0127 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DEFDS_P213 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ddf04147]
D DEFDS_0201 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DEFDS_1892 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DEFDS_1355 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DEFDS_0240 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DEFDS_2114 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_1195 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D DEFDS_1026 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DEFDS_0469 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DEFDS_1774 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DEFDS_1787 translation elongation factor Tu K02358 tuf; elongation factor Tu
D DEFDS_1906 histidine triad family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DEFDS_1496 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1468 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_0642 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DEFDS_1929 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1837 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DEFDS_1514 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DEFDS_1752 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DEFDS_2110 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DEFDS_1627 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DEFDS_1408 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DEFDS_1230 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DEFDS_1474 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DEFDS_0812 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DEFDS_0857 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DEFDS_1187 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DEFDS_1961 peptidase, M48 family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DEFDS_1513 mercuric reductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DEFDS_1831 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D DEFDS_0129 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:ddf02048]
D DEFDS_0556 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D DEFDS_0555 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D DEFDS_P068 CRISPR-associated protein Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D DEFDS_0547 CRISPR-associated protein Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D DEFDS_0557 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DEFDS_0554 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D DEFDS_P072 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D DEFDS_0553 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1
D DEFDS_P071 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1
D DEFDS_P070 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D DEFDS_0552 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D DEFDS_0550 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D DEFDS_P069 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D DEFDS_0290 type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DEFDS_0898 transcriptional regulator, PemK family K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D DEFDS_0899 suppressor of inhibitory function of ChpA K07172 mazE; antitoxin MazE
D DEFDS_0548 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D DEFDS_P136 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DEFDS_P135 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D DEFDS_0716 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D DEFDS_0717 plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D DEFDS_0601 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DEFDS_1158 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DEFDS_2167 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1944 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DEFDS_1558 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ddf04090]
C 01504 Antimicrobial resistance genes [BR:ddf01504]
D DEFDS_1909 RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DEFDS_0615 conserved hypothetical protein K12340 tolC; outer membrane protein
D DEFDS_0053 conserved hypothetical protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ddf03100]
D DEFDS_t12 trn_Ala1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DEFDS_t42 trn_Ala3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DEFDS_t39 trn_Ala2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DEFDS_t06 trn_Arg1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t25 trn_Arg4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t20 trn_Arg3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t10 trn_Arg2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DEFDS_t40 trn_Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DEFDS_t34 trn_Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DEFDS_t41 trn_Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DEFDS_t26 trn_Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DEFDS_t36 trn_Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DEFDS_t03 trn_Gly1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t09 trn_Gly2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t13 trn_Gly3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t31 trn_Gly4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DEFDS_t05 trn_His; tRNA-His K14226 tRNA-His; tRNA His
D DEFDS_t11 trn_Ile1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DEFDS_t43 trn_Ile2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DEFDS_t15 trn_Leu3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t08 trn_Leu2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t38 trn_Leu5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t04 trn_Leu1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t22 trn_Leu4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DEFDS_t37 trn_Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DEFDS_t01 trn_Met1; tRNA-Met K14230 tRNA-Met; tRNA Met
D DEFDS_t02 trn_Met2; tRNA-Met K14230 tRNA-Met; tRNA Met
D DEFDS_t27 trn_Met3; tRNA-Met K14230 tRNA-Met; tRNA Met
D DEFDS_t19 trn_Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DEFDS_t23 trn_Pro1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DEFDS_t24 trn_Pro2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DEFDS_t21 trn_Ser4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t17 trn_Ser2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t16 trn_Ser1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t18 trn_Ser3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DEFDS_t14 trn_Thr1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DEFDS_t33 trn_Thr3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DEFDS_t30 trn_Thr2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DEFDS_t29 trn_Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DEFDS_t32 trn_Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DEFDS_t35 trn_Val2; tRNA-Val K14237 tRNA-Val; tRNA Val
D DEFDS_t28 trn_Val1; tRNA-Val K14237 tRNA-Val; tRNA Val
D DEFDS_t07 trn_SeC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D DEFDS_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DEFDS_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DEFDS_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DEFDS_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DEFDS_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DEFDS_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DEFDS_n02 bacterial RNase P class B K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DEFDS_0781 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D DEFDS_1293 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D DEFDS_1292 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D DEFDS_0782 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D DEFDS_1287 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D DEFDS_0705 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D DEFDS_0572 rubredoxin-oxygen oxidoreductase K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D DEFDS_2015 alcohol dehydrogenase, zinc-binding K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DEFDS_1829 2-nitropropane dioxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DEFDS_0947 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DEFDS_1350 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DEFDS_1019 superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D DEFDS_0908 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D DEFDS_0829 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D DEFDS_1452 arsenate reductase (glutaredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DEFDS_2104 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DEFDS_0647 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DEFDS_1634 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D DEFDS_0260 protein-L-isoaspartate (D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DEFDS_1899 protein-L-isoaspartate (D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DEFDS_1472 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D DEFDS_0986 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DEFDS_0369 conserved hypothetical protein K22885 K22885; dTDP-4-amino-4,6-dideoxyglucose formyltransferase [EC:2.3.1.-]
D DEFDS_2034 conserved hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D DEFDS_1902 conserved hypothetical protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D DEFDS_0078 sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D DEFDS_0329 glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D DEFDS_0021 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D DEFDS_1811 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DEFDS_0646 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DEFDS_0531 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D DEFDS_2134 glnE; glutamate-ammonia ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D DEFDS_1031 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D DEFDS_1047 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D DEFDS_1284 conserved hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D DEFDS_1548 appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DEFDS_1840 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DEFDS_1471 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D DEFDS_2128 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DEFDS_0497 conserved hypothetical protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DEFDS_0065 deoxyribonuclease, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DEFDS_P103 thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D DEFDS_2130 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DEFDS_0269 formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DEFDS_0376 conserved hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D DEFDS_0650 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DEFDS_2036 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DEFDS_0510 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DEFDS_1637 conserved hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D DEFDS_1640 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D DEFDS_1233 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D DEFDS_0488 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D DEFDS_0487 rnfC; electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D DEFDS_0492 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D DEFDS_1918 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D DEFDS_1917 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D DEFDS_1916 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D DEFDS_1915 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D DEFDS_1914 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D DEFDS_1913 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D DEFDS_0300 heavy-metal transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D DEFDS_0787 heavy-metal transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D DEFDS_1600 sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D DEFDS_0494 acuB; acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
D DEFDS_1490 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D DEFDS_1349 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D DEFDS_1348 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D DEFDS_1018 formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D DEFDS_0489 rnfG; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D DEFDS_0490 rnfE; electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D DEFDS_0491 rnfA; electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D DEFDS_1557 nitrogen-fixing NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D DEFDS_1822 periplasmic nitrate reductase NapG K02573 napG; ferredoxin-type protein NapG
D DEFDS_1823 periplasmic nitrate reductase NapH K02574 napH; ferredoxin-type protein NapH
D DEFDS_1832 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DEFDS_0997 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DEFDS_0190 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D DEFDS_0191 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D DEFDS_0728 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D DEFDS_0407 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D DEFDS_2001 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D DEFDS_1024 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DEFDS_1633 cspB; cold shock protein K03704 cspA; cold shock protein
D DEFDS_1433 cspC; cold shock protein K03704 cspA; cold shock protein
D DEFDS_0638 transcription accessory protein K06959 tex; protein Tex
D DEFDS_1379 conserved hypothetical protein K07743 K07743; transcriptional regulator
C 99974 Translation
C 99975 Protein processing
D DEFDS_0192 tig; trigger factor K03545 tig; trigger factor
D DEFDS_1882 smpB; ssrA RNA (tmRNA)-binding protein K03664 smpB; SsrA-binding protein
D DEFDS_1732 hydrogenase expression/formation protein HupF/HypC K04653 hypC; hydrogenase expression/formation protein HypC
D DEFDS_1731 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D DEFDS_1730 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D DEFDS_1539 Ni-Fe hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D DEFDS_2092 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D DEFDS_0800 membrane-bound serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D DEFDS_0563 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DEFDS_0818 endonuclease III K07457 K07457; endonuclease III related protein
D DEFDS_0180 conserved hypothetical protein K07460 yraN; putative endonuclease
D DEFDS_0358 conserved hypothetical protein K07461 K07461; putative endonuclease
D DEFDS_1805 DNA processing protein A K04096 smf; DNA processing protein
D DEFDS_0479 ATPase, AAA family K07478 ycaJ; putative ATPase
D DEFDS_0280 transposase, IS4 family K07481 K07481; transposase, IS5 family
D DEFDS_0725 transposase, IS4 family K07481 K07481; transposase, IS5 family
D DEFDS_P002 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P204 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P191 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P174 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P163 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P149 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P144 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P127 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P108 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P101 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P096 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P086 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P083 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P053 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P044 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P040 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_P037 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D DEFDS_0873 transposase, IS654 family K07493 K07493; putative transposase
D DEFDS_1327 transposase, IS654 family K07493 K07493; putative transposase
D DEFDS_0244 transposase, IS654 family K07493 K07493; putative transposase
D DEFDS_0284 transposase, IS654 family K07493 K07493; putative transposase
D DEFDS_P121 transposase K07493 K07493; putative transposase
D DEFDS_P003 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P205 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P192 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P175 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P164 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P150 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P145 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P128 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P109 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P102 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P097 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P087 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P084 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P054 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P045 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P041 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_P038 transposase, IS605 family K07496 K07496; putative transposase
D DEFDS_0708 phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D DEFDS_0142 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DEFDS_1547 solute:sodium symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D DEFDS_1601 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DEFDS_1281 conserved hypothetical protein K07085 K07085; putative transport protein
C 99978 Cell growth
D DEFDS_0350 single-stranded nucleic acid binding protein K06346 jag; spoIIIJ-associated protein
D DEFDS_1364 hypothetical protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D DEFDS_0024 mutual gliding protein A K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D DEFDS_1078 phosphate starvation-induced protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D DEFDS_0226 phosphate starvation-induced protein K07175 phoH2; PhoH-like ATPase
D DEFDS_P062 phosphate starvation-induced protein PhoH K07175 phoH2; PhoH-like ATPase
D DEFDS_1572 cyclic nucleotide binding protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D DEFDS_0271 conserved hypothetical protein K03634 lolA; outer membrane lipoprotein carrier protein
D DEFDS_0105 outer membrane protein OmpH K06142 hlpA; outer membrane protein
D DEFDS_0173 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D DEFDS_1560 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D DEFDS_0404 phosphate transport system regulator K02039 phoU; phosphate transport system protein
D DEFDS_1545 methyl-accepting chemotaxis protein K07216 hr; hemerythrin
D DEFDS_0846 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D DEFDS_P063 methyl-accepting chemotaxis protein K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DEFDS_1584 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D DEFDS_1570 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D DEFDS_1609 conserved hypothetical protein K07001 K07001; NTE family protein
D DEFDS_1259 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DEFDS_1650 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D DEFDS_1879 conserved hypothetical protein K07038 K07038; inner membrane protein
D DEFDS_0622 conserved hypothetical protein K07058 K07058; membrane protein
D DEFDS_1131 conserved hypothetical protein K03744 lemA; LemA protein
D DEFDS_0628 conserved hypothetical protein K08972 K08972; putative membrane protein
D DEFDS_0304 conserved hypothetical protein K08982 K08982; putative membrane protein
D DEFDS_0309 conserved hypothetical protein K08982 K08982; putative membrane protein
D DEFDS_0914 conserved hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D DEFDS_P249 hypothetical protein K06871 K06871; uncharacterized protein
D DEFDS_1296 conserved hypothetical protein K06888 K06888; uncharacterized protein
D DEFDS_1438 conserved hypothetical protein K06888 K06888; uncharacterized protein
D DEFDS_0813 conserved hypothetical protein K06923 K06923; uncharacterized protein
D DEFDS_1675 conserved hypothetical protein K06929 K06929; uncharacterized protein
D DEFDS_1690 conserved hypothetical protein K06933 K06933; uncharacterized protein
D DEFDS_1700 conserved hypothetical protein K06933 K06933; uncharacterized protein
D DEFDS_1554 conserved hypothetical protein K06934 K06934; uncharacterized protein
D DEFDS_0314 conserved hypothetical protein K06940 K06940; uncharacterized protein
D DEFDS_0253 conserved hypothetical protein K06960 K06960; uncharacterized protein
D DEFDS_1145 conserved hypothetical protein K07014 K07014; uncharacterized protein
D DEFDS_1405 conserved hypothetical protein K07028 K07028; uncharacterized protein
D DEFDS_0518 conserved hypothetical protein K07034 K07034; uncharacterized protein
D DEFDS_0777 conserved hypothetical protein K07071 K07071; uncharacterized protein
D DEFDS_P132 conserved hypothetical protein K07074 K07074; uncharacterized protein
D DEFDS_2018 conserved hypothetical protein K07075 K07075; uncharacterized protein
D DEFDS_0387 nucleotidyltransferase K07075 K07075; uncharacterized protein
D DEFDS_0551 conserved hypothetical protein K07075 K07075; uncharacterized protein
D DEFDS_1847 TRAP-type transport system, substrate-binding protein K07080 K07080; uncharacterized protein
D DEFDS_1400 TRAP-type transport system, substrate-binding protein K07080 K07080; uncharacterized protein
D DEFDS_1672 conserved hypothetical protein K07089 K07089; uncharacterized protein
D DEFDS_0184 conserved hypothetical protein K07090 K07090; uncharacterized protein
D DEFDS_0694 conserved hypothetical protein K07090 K07090; uncharacterized protein
D DEFDS_1353 conserved hypothetical protein K07090 K07090; uncharacterized protein
D DEFDS_0058 conserved hypothetical protein K07095 K07095; uncharacterized protein
D DEFDS_1157 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D DEFDS_1844 conserved hypothetical protein K07097 K07097; uncharacterized protein
D DEFDS_2021 ATPase, AAA family K07133 K07133; uncharacterized protein
D DEFDS_0389 conserved hypothetical protein K07133 K07133; uncharacterized protein
D DEFDS_0392 conserved hypothetical protein K07133 K07133; uncharacterized protein
D DEFDS_0880 conserved hypothetical protein K07133 K07133; uncharacterized protein
D DEFDS_0394 conserved hypothetical protein K07133 K07133; uncharacterized protein
D DEFDS_0059 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D DEFDS_0264 4Fe-4S ferredoxin K07138 K07138; uncharacterized protein
D DEFDS_0514 conserved hypothetical protein K07139 K07139; uncharacterized protein
D DEFDS_1841 conserved hypothetical protein K07150 K07150; uncharacterized protein
D DEFDS_1484 conserved hypothetical protein K07164 K07164; uncharacterized protein
D DEFDS_0348 conserved hypothetical protein K08998 K08998; uncharacterized protein
D DEFDS_1390 conserved hypothetical protein K08999 K08999; uncharacterized protein
D DEFDS_1583 conserved hypothetical protein K09117 K09117; uncharacterized protein
D DEFDS_0212 conserved hypothetical protein K09131 K09131; uncharacterized protein
D DEFDS_0610 conserved hypothetical protein K09137 K09137; uncharacterized protein
D DEFDS_1903 conserved hypothetical protein K09138 K09138; uncharacterized protein
D DEFDS_0690 conserved hypothetical protein K09141 K09141; uncharacterized protein
D DEFDS_0080 conserved hypothetical protein K09155 K09155; uncharacterized protein
D DEFDS_0798 conserved hypothetical protein K09158 K09158; uncharacterized protein
D DEFDS_1136 hypothetical protein K09749 K09749; uncharacterized protein
D DEFDS_0013 conserved hypothetical protein K09749 K09749; uncharacterized protein
D DEFDS_0848 conserved hypothetical protein K09749 K09749; uncharacterized protein
D DEFDS_1524 conserved hypothetical protein K09764 K09764; uncharacterized protein
D DEFDS_0512 conserved hypothetical protein K09791 K09791; uncharacterized protein
D DEFDS_1516 conserved hypothetical protein K09794 K09794; uncharacterized protein
D DEFDS_1366 hypothetical protein K09798 K09798; uncharacterized protein
D DEFDS_1705 conserved hypothetical protein K09928 K09928; uncharacterized protein
D DEFDS_0806 conserved hypothetical protein K01163 K01163; uncharacterized protein
D DEFDS_1526 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024