+D GENES KO
#
KEGG Orthology (KO) - Dehalococcoides sp. UCH007
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:duc00010]
D UCH007_00470 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D UCH007_04370 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UCH007_11090 fruK; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D UCH007_09730 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D UCH007_06190 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UCH007_05150 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UCH007_06210 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UCH007_06200 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UCH007_15030 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UCH007_05170 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UCH007_04810 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00020 Citrate cycle (TCA cycle) [PATH:duc00020]
D UCH007_14830 pyruvate carboxyltransferase family protein K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D UCH007_03820 icd; isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D UCH007_03850 putative fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D UCH007_03860 putative fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UCH007_01060 pycA; pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D UCH007_01050 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:duc00030]
D UCH007_04370 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UCH007_05630 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UCH007_05650 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D UCH007_11690 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D UCH007_05640 rpiB; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UCH007_05950 putative sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D UCH007_03670 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D UCH007_09730 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D UCH007_11090 fruK; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:duc00040]
D UCH007_06130 oxidoreductase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D UCH007_05630 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UCH007_01090 putative zinc-containing alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D UCH007_15080 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:duc00051]
D UCH007_04370 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UCH007_09570 putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D UCH007_02350 nucleotidyl transferase domain protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D UCH007_15080 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D UCH007_11250 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D UCH007_11090 fruK; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D UCH007_01090 putative zinc-containing alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D UCH007_09730 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D UCH007_06190 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UCH007_05640 rpiB; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:duc00052]
D UCH007_02340 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UCH007_00470 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D UCH007_11090 fruK; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D UCH007_11080 putative tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:duc00500]
D UCH007_00470 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D UCH007_04370 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:duc00520]
D UCH007_04590 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UCH007_04560 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D UCH007_04570 nucleotidyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UCH007_00470 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D UCH007_02340 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UCH007_04370 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D UCH007_09570 putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D UCH007_02350 nucleotidyl transferase domain protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:duc00620]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D UCH007_08630 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D UCH007_06580 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D UCH007_01060 pycA; pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D UCH007_01050 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UCH007_03850 putative fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D UCH007_03860 putative fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D UCH007_04810 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D UCH007_06910 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D UCH007_06960 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:duc00630]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UCH007_09020 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_13560 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_03680 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UCH007_02180 fdhA; formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D UCH007_00990 Ni/Fe hydrogenase iron-sulfur binding subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D UCH007_05620 hypothetical protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D UCH007_10070 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:duc00640]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D UCH007_01230 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D UCH007_14470 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:duc00650]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D UCH007_06990 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UCH007_06980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:duc00660]
D UCH007_06990 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UCH007_06980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UCH007_03800 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_06940 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_03810 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_06930 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_06920 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:duc00562]
D UCH007_08180 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D UCH007_06190 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:duc00190]
D UCH007_07550 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D UCH007_07560 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D UCH007_07570 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D UCH007_07580 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D UCH007_07280 echG; Ech hydrogenase subunit G K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D UCH007_01310 hymA; putative Fe hydrogenase subunit HymA K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D UCH007_03780 hymA; putative Fe hydrogenase subunit HymA K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D UCH007_06080 hymA; putative Fe hydrogenase subunit HymA K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D UCH007_07290 echH; Ech hydrogenase subunit H K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D UCH007_01320 hymB; putative Fe hydrogenase subunit HymB K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D UCH007_06090 hymB; putative Fe hydrogenase subunit HymB K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D UCH007_01330 hymC; putative Fe hydrogenase subunit HymC K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D UCH007_07590 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D UCH007_07610 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D UCH007_07630 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D UCH007_07640 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D UCH007_07650 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D UCH007_07620 nuoK; NADH-quinone oxidoreductase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D UCH007_07600 nuoI; NADH-quinone oxidoreductase subunit I K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2]
D UCH007_07300 echI; Ech hydrogenase subunit I K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D UCH007_06100 hymC; putative Fe hydrogenase subunit HymC K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D UCH007_04880 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UCH007_04900 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UCH007_04890 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UCH007_04870 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UCH007_04910 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UCH007_04840 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UCH007_04860 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UCH007_04850 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UCH007_03040 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:duc00710]
D UCH007_06210 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UCH007_05150 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UCH007_05650 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D UCH007_05640 rpiB; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UCH007_06190 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UCH007_05630 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UCH007_11690 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:duc00720]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D UCH007_04810 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D UCH007_01060 pycA; pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D UCH007_01050 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UCH007_03850 putative fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D UCH007_03860 putative fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D UCH007_01080 putative oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D UCH007_05860 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UCH007_09120 hydN; electron transport protein HydN K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D UCH007_05840 acsB; acetyl-CoA synthetase K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D UCH007_05830 acsC; corrinoid/iron-sulfur protein large subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D UCH007_05850 acsD; corrinoid/iron-sulfur protein small subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:duc00680]
D UCH007_02180 fdhA; formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D UCH007_00990 Ni/Fe hydrogenase iron-sulfur binding subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D UCH007_01080 putative oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D UCH007_05830 acsC; corrinoid/iron-sulfur protein large subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D UCH007_05850 acsD; corrinoid/iron-sulfur protein small subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D UCH007_09120 hydN; electron transport protein HydN K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D UCH007_03680 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UCH007_05170 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UCH007_09730 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D UCH007_11090 fruK; 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D UCH007_02440 hypothetical protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D UCH007_05380 hydrogenase maturation protease K00442 frhD; coenzyme F420 hydrogenase subunit delta
D UCH007_05370 F420-non-reducing hydrogenase subunit A K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5]
D UCH007_05360 F420-non-reducing hydrogenase subunit G K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D UCH007_04810 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D UCH007_06200 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UCH007_15030 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UCH007_05230 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:duc00910]
D UCH007_09020 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_13560 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_00360 sudA; putative sulfide dehydrogenase subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D UCH007_08990 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:duc00920]
D UCH007_14590 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UCH007_09140 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:duc00061]
D UCH007_10450 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D UCH007_10420 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UCH007_08020 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UCH007_10430 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UCH007_10380 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D UCH007_08680 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_07780 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D UCH007_08680 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_07780 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:duc00561]
D UCH007_04710 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UCH007_11570 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_12000 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_08040 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_00080 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_14800 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_03480 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D UCH007_01350 putative alpha/beta hydrolase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
C 00564 Glycerophospholipid metabolism [PATH:duc00564]
D UCH007_11580 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D UCH007_11570 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_12000 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_08040 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_00080 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_14800 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_03480 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D UCH007_03090 cdsA; putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:duc00230]
D UCH007_03880 putative NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D UCH007_03670 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D UCH007_11750 purF; putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UCH007_07040 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D UCH007_05960 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UCH007_03150 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UCH007_03160 purL; phosphoribosylformylglycinamidine synthase 2 K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D UCH007_11760 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D UCH007_07050 purE; phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D UCH007_07070 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D UCH007_07060 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UCH007_11780 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UCH007_06700 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D UCH007_06650 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D UCH007_06240 putative hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D UCH007_03200 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D UCH007_03280 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UCH007_09740 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D UCH007_07020 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D UCH007_00330 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D UCH007_00780 putative ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_05450 putative ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_02810 nrdJ; vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_04800 dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D UCH007_00050 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D UCH007_08150 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D UCH007_06640 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D UCH007_14780 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D UCH007_04250 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UCH007_15040 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D UCH007_14840 hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:duc00240]
D UCH007_09510 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UCH007_09500 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UCH007_09480 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D UCH007_09490 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D UCH007_11340 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D UCH007_09520 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D UCH007_09430 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D UCH007_00120 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D UCH007_03120 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D UCH007_03280 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UCH007_15040 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D UCH007_09000 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D UCH007_11700 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D UCH007_06700 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D UCH007_09470 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D UCH007_14780 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D UCH007_00780 putative ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_05450 putative ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_02810 nrdJ; vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_03470 dcd; putative dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D UCH007_06510 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D UCH007_03490 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UCH007_06850 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D UCH007_12340 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:duc00250]
D UCH007_11440 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D UCH007_01180 ornithine cyclodeaminase/mu-crystallin family protein K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
D UCH007_10270 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UCH007_10280 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UCH007_08150 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D UCH007_07060 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UCH007_09480 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D UCH007_00360 sudA; putative sulfide dehydrogenase subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D UCH007_09020 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_13560 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_09510 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UCH007_09500 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UCH007_03150 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UCH007_04590 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UCH007_11750 purF; putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:duc00260]
D UCH007_15010 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UCH007_08110 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UCH007_09550 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UCH007_09540 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D UCH007_01390 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D UCH007_03680 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UCH007_06200 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UCH007_15030 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UCH007_05230 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UCH007_12280 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D UCH007_12270 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D UCH007_08690 trpB; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:duc00270]
D UCH007_14590 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UCH007_09140 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D UCH007_04400 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D UCH007_04450 mtaP; putative S-methyl-5-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D UCH007_04460 mtnA; putative methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D UCH007_06330 putative hydrolase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D UCH007_04410 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D UCH007_15010 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UCH007_08110 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UCH007_09550 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UCH007_07530 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D UCH007_07520 iron-sulfur binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D UCH007_00090 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UCH007_03830 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UCH007_05230 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:duc00280]
D UCH007_00090 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:duc00290]
D UCH007_03800 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_06940 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_03810 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_06930 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D UCH007_06920 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D UCH007_06990 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UCH007_06980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UCH007_06970 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D UCH007_07000 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D UCH007_00090 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UCH007_06910 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D UCH007_06960 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:duc00300]
D UCH007_09550 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UCH007_15010 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UCH007_08110 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UCH007_08120 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UCH007_08100 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D UCH007_10250 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D UCH007_06170 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D UCH007_06160 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D UCH007_04620 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00310 Lysine degradation
D UCH007_05500 kamA; putative lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D UCH007_02500 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:duc00220]
D UCH007_11550 argI; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D UCH007_10270 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UCH007_10280 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UCH007_03150 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UCH007_09020 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_13560 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_09510 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UCH007_09500 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UCH007_03890 putative acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D UCH007_10230 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D UCH007_10240 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D UCH007_14940 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D UCH007_10250 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:duc00330]
D UCH007_02230 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D UCH007_10480 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D UCH007_10540 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:duc00340]
D UCH007_07110 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D UCH007_10930 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D UCH007_10950 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D UCH007_09110 hisH; imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D UCH007_09080 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D UCH007_07990 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D UCH007_07080 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D UCH007_05740 cobD; cobalamin biosynthesis protein CobD K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07100 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism
D UCH007_05740 cobD; cobalamin biosynthesis protein CobD K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:duc00360]
D UCH007_08500 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D UCH007_07690 thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D UCH007_05740 cobD; cobalamin biosynthesis protein CobD K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:duc00380]
D UCH007_05620 hypothetical protein K07130 kynB; arylformamidase [EC:3.5.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:duc00400]
D UCH007_12260 aroG; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D UCH007_04000 aroG; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D UCH007_03340 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D UCH007_03990 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D UCH007_03980 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D UCH007_03960 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D UCH007_03950 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D UCH007_03940 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D UCH007_12210 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D UCH007_12220 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D UCH007_12230 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D UCH007_01100 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D UCH007_12250 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D UCH007_12240 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D UCH007_12280 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D UCH007_12270 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D UCH007_08690 trpB; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D UCH007_03930 pheA; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D UCH007_03920 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D UCH007_14290 putative prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D UCH007_05740 cobD; cobalamin biosynthesis protein CobD K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:duc00410]
D UCH007_06730 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D UCH007_06750 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D UCH007_01180 ornithine cyclodeaminase/mu-crystallin family protein K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:duc00450]
D UCH007_04700 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D UCH007_03230 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D UCH007_03680 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:duc00470]
D UCH007_05510 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UCH007_03150 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UCH007_06170 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D UCH007_04620 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:duc00480]
D UCH007_12060 hypothetical protein K00682 GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9]
D UCH007_08650 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:duc00540]
D UCH007_02370 hypothetical protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D UCH007_02360 putative kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:duc00541]
D UCH007_02340 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UCH007_04580 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D UCH007_04570 nucleotidyl transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:duc00550]
D UCH007_05510 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UCH007_03100 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:duc00543]
D UCH007_02430 hypothetical protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
D UCH007_14590 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:duc00730]
D UCH007_06480 thiC; putative thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D UCH007_06220 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D UCH007_06550 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D UCH007_03310 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D UCH007_04250 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:duc00740]
D UCH007_09380 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D UCH007_09400 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UCH007_09370 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D UCH007_09390 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D UCH007_05260 ribF; riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D UCH007_03880 putative NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:duc00750]
D UCH007_09540 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D UCH007_03170 pdxS; pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D UCH007_05220 pdxT; glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:duc00760]
D UCH007_11440 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D UCH007_14610 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D UCH007_11430 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D UCH007_11790 hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D UCH007_06700 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D UCH007_00030 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D UCH007_15040 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D UCH007_09010 nadE; putative glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D UCH007_10570 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D UCH007_03900 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:duc00770]
D UCH007_06990 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UCH007_06980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UCH007_06970 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D UCH007_07000 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D UCH007_06740 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D UCH007_06750 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D UCH007_03600 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D UCH007_03610 coaBC; putative phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D UCH007_15040 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D UCH007_02200 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D UCH007_10870 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D UCH007_03770 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D UCH007_00090 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UCH007_06730 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:duc00780]
D UCH007_08020 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UCH007_10430 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UCH007_10380 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D UCH007_07150 birA; biotin protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:duc00790]
D UCH007_09530 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D UCH007_14730 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D UCH007_14720 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D UCH007_00150 folC; folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D UCH007_09380 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D UCH007_14740 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D UCH007_01940 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D UCH007_00860 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:duc00670]
D UCH007_05860 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UCH007_03680 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UCH007_05960 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UCH007_11780 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UCH007_15090 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UCH007_06850 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D UCH007_12340 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D UCH007_10070 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:duc00860]
D UCH007_11270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UCH007_01130 cobB; cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D UCH007_09180 cobA; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D UCH007_09720 cobA; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D UCH007_07680 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D UCH007_09170 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D UCH007_05730 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D UCH007_13440 rdhF; adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D UCH007_05720 cbiZ; adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D UCH007_05780 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D UCH007_05760 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D UCH007_05750 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D UCH007_05770 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D UCH007_07860 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:duc00130]
D UCH007_03320 ubiE; ubiquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D UCH007_03330 ubiE; ubiquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D UCH007_03350 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:duc00900]
D UCH007_06220 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D UCH007_03080 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D UCH007_00550 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D UCH007_03390 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D UCH007_00560 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D UCH007_03060 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D UCH007_11070 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D UCH007_03240 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D UCH007_03100 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D UCH007_05650 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D UCH007_04580 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:duc00332]
D UCH007_10480 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D UCH007_10540 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:duc00261]
D UCH007_15010 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UCH007_08110 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UCH007_08120 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UCH007_08100 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:duc00521]
D UCH007_00470 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D UCH007_08180 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D UCH007_04580 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D UCH007_00470 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D UCH007_04580 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:duc00401]
D UCH007_03920 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D UCH007_05740 cobD; cobalamin biosynthesis protein CobD K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D UCH007_12210 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D UCH007_12220 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D UCH007_10420 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UCH007_10430 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UCH007_10380 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D UCH007_10450 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D UCH007_04400 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D UCH007_08630 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:duc00633]
D UCH007_00980 hupS; Ni/Fe hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D UCH007_09120 hydN; electron transport protein HydN K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D UCH007_06060 porA; pyruvate synthase subunit PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D UCH007_06070 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D UCH007_06040 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D UCH007_06050 porD; pyruvate synthase subunit PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:duc03020]
D UCH007_05270 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UCH007_05280 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UCH007_04310 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:duc03010]
D UCH007_03140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UCH007_04110 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UCH007_04300 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UCH007_04210 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UCH007_08800 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UCH007_04020 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UCH007_04180 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UCH007_04350 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UCH007_04040 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UCH007_04290 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UCH007_04010 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UCH007_04280 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UCH007_08080 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UCH007_04940 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UCH007_04140 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D UCH007_08780 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UCH007_04090 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D UCH007_15060 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D UCH007_02850 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UCH007_08310 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UCH007_04080 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D UCH007_04050 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UCH007_04060 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UCH007_04170 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UCH007_04190 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UCH007_08290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UCH007_04690 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UCH007_08300 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UCH007_08320 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UCH007_04340 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UCH007_04150 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UCH007_04230 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D UCH007_04120 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UCH007_04320 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UCH007_04200 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D UCH007_02730 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UCH007_06250 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UCH007_10890 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UCH007_04100 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D UCH007_04070 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UCH007_04160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UCH007_12070 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UCH007_10900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UCH007_10290 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UCH007_04130 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UCH007_04220 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D UCH007_10910 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UCH007_10410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UCH007_08350 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UCH007_08770 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D UCH007_06260 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UCH007_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UCH007_r0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:duc00970]
D UCH007_t0440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UCH007_t0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UCH007_t0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UCH007_t0450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0130 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0090 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0190 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UCH007_t0310 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UCH007_t0380 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D UCH007_t0180 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UCH007_t0300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UCH007_t0290 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UCH007_t0460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UCH007_t0370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0210 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0430 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0240 tRNA-His K14226 tRNA-His; tRNA His
D UCH007_t0280 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UCH007_t0360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0200 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UCH007_t0220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UCH007_t0330 tRNA-Met K14230 tRNA-Met; tRNA Met
D UCH007_t0120 tRNA-Met K14230 tRNA-Met; tRNA Met
D UCH007_t0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D UCH007_t0160 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UCH007_t0470 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UCH007_t0150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UCH007_t0100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UCH007_t0340 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UCH007_t0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UCH007_t0250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UCH007_t0350 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D UCH007_t0260 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UCH007_t0420 tRNA-Val K14237 tRNA-Val; tRNA Val
D UCH007_t0320 tRNA-Val K14237 tRNA-Val; tRNA Val
D UCH007_t0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D UCH007_11270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UCH007_10980 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UCH007_14320 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UCH007_10970 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UCH007_00480 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UCH007_05920 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UCH007_06600 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UCH007_06280 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UCH007_05020 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UCH007_00570 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UCH007_03230 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UCH007_15090 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UCH007_03620 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UCH007_02240 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UCH007_08720 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UCH007_05030 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UCH007_10360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UCH007_03050 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UCH007_07120 hisZ; ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UCH007_00060 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UCH007_03020 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UCH007_03030 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UCH007_05250 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UCH007_11060 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:duc03060]
D UCH007_04240 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UCH007_08340 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UCH007_14310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UCH007_02690 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D UCH007_02680 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D UCH007_11450 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D UCH007_08740 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UCH007_03660 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UCH007_14690 tatB; Sec-independent protein translocase TatB K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14700 tatAE; Sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14710 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14680 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D UCH007_09420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UCH007_11360 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D UCH007_06520 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:duc03018]
D UCH007_05170 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UCH007_08090 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UCH007_02140 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D UCH007_11680 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D UCH007_14770 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UCH007_02040 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UCH007_03700 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UCH007_11600 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D UCH007_11890 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UCH007_02700 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:duc03030]
D UCH007_12170 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UCH007_05100 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UCH007_04630 holB; putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UCH007_00450 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UCH007_09750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_01810 DNA polymerase sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_04680 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UCH007_04790 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D UCH007_08790 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_00690 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_02980 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UCH007_06530 rnhB; putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UCH007_11510 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UCH007_05200 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:duc03410]
D UCH007_07670 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D UCH007_11490 mutM; formamidopyrimidine-DNA glycolase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D UCH007_03690 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D UCH007_03260 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D UCH007_11510 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UCH007_08030 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UCH007_05200 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:duc03420]
D UCH007_10470 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D UCH007_04740 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D UCH007_03730 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D UCH007_09650 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D UCH007_09460 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UCH007_11510 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UCH007_05200 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:duc03430]
D UCH007_09680 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D UCH007_09450 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D UCH007_09460 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UCH007_08030 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UCH007_08790 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_00690 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_12170 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UCH007_09750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_01810 DNA polymerase sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_05100 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UCH007_00450 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UCH007_04630 holB; putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UCH007_05200 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:duc03440]
D UCH007_08030 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UCH007_08790 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_00690 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_05050 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D UCH007_05080 recR; recombination protein RecR K06187 recR; recombination protein RecR
D UCH007_14750 recA; RecA protein K03553 recA; recombination protein RecA
D UCH007_11510 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UCH007_03740 ruvA; Holliday junction ATP-dependent DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D UCH007_05290 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UCH007_01490 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UCH007_03750 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D UCH007_10350 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UCH007_12170 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UCH007_09750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_01810 DNA polymerase sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_05100 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UCH007_00450 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UCH007_04630 holB; putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UCH007_02720 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D UCH007_07160 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:duc02010]
D UCH007_01240 pstS; phosphate ABC transporter substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UCH007_01250 pstC; phosphate ABC transporter permease protein K02037 pstC; phosphate transport system permease protein
D UCH007_01260 pstA; phosphate ABC transporter permease protein K02038 pstA; phosphate transport system permease protein
D UCH007_01270 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UCH007_07740 ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UCH007_07750 ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UCH007_07770 ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D UCH007_07760 ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D UCH007_07700 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D UCH007_07730 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D UCH007_08940 oligopeptide ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_04990 putative ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_08930 oligopeptide ABC transporter permease protein K15581 oppB; oligopeptide transport system permease protein
D UCH007_08920 oligopeptide ABC transporter permease protein K15582 oppC; oligopeptide transport system permease protein
D UCH007_08910 oligopeptide ABC transporter ATP binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UCH007_08900 oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UCH007_05530 cation ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein
D UCH007_05550 cation ABC transporter permease protein K09816 znuB; zinc transport system permease protein
D UCH007_05540 cation ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D UCH007_09340 bioY; biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D UCH007_03450 putative ABC transporter permease protein K09694 nodJ; lipooligosaccharide transport system permease protein
D UCH007_03440 putative ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D UCH007_09300 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D UCH007_09310 putative ABC transporter permease protein/ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:duc03070]
D UCH007_11140 pilB; type IV pilus assembly protein PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D UCH007_02690 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D UCH007_02680 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D UCH007_08340 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UCH007_14310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UCH007_04240 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UCH007_11450 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D UCH007_08740 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UCH007_03660 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UCH007_14690 tatB; Sec-independent protein translocase TatB K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14700 tatAE; Sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14710 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14680 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:duc02020]
D UCH007_01220 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D UCH007_14240 rdhD; two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UCH007_09050 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UCH007_01150 putative response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UCH007_01240 pstS; phosphate ABC transporter substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UCH007_08710 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10510 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10520 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_08700 putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_09960 rdhC; two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D UCH007_00790 rdhD; putative response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D UCH007_13680 rdhD; two-component transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D UCH007_02100 rdhC; two-component sensor histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D UCH007_13420 rdhC; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D UCH007_13890 rdhD; putative two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UCH007_00830 rdhD; putative two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UCH007_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D UCH007_03630 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UCH007_05800 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UCH007_11130 putative response regulator K07692 degU; two-component system, NarL family, response regulator DegU
D UCH007_03640 two-component response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D UCH007_09030 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D UCH007_09020 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_13560 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_11230 general secretion protein K02650 pilA; type IV pilus assembly protein PilA
D UCH007_01200 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D UCH007_00980 hupS; Ni/Fe hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:duc02024]
D UCH007_12210 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D UCH007_12220 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D UCH007_00790 rdhD; putative response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D UCH007_13680 rdhD; two-component transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D UCH007_07740 ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UCH007_07750 ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UCH007_07770 ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D UCH007_07760 ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D UCH007_07700 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D UCH007_07730 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D UCH007_08680 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_07780 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_09400 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UCH007_08940 oligopeptide ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_04990 putative ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_08930 oligopeptide ABC transporter permease protein K15581 oppB; oligopeptide transport system permease protein
D UCH007_08920 oligopeptide ABC transporter permease protein K15582 oppC; oligopeptide transport system permease protein
D UCH007_08910 oligopeptide ABC transporter ATP binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UCH007_08900 oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UCH007_12390 peptide ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UCH007_12380 peptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D UCH007_12370 putative peptide ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D UCH007_12360 putative peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D UCH007_12350 putative peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D UCH007_11080 putative tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D UCH007_08740 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UCH007_08340 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UCH007_14310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UCH007_04240 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UCH007_11450 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D UCH007_03660 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UCH007_11130 putative response regulator K07692 degU; two-component system, NarL family, response regulator DegU
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D UCH007_04780 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D UCH007_05170 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D UCH007_08940 oligopeptide ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_04990 putative ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_08930 oligopeptide ABC transporter permease protein K15581 oppB; oligopeptide transport system permease protein
D UCH007_08920 oligopeptide ABC transporter permease protein K15582 oppC; oligopeptide transport system permease protein
D UCH007_08910 oligopeptide ABC transporter ATP binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UCH007_08900 oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance [PATH:duc01502]
D UCH007_05510 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D UCH007_08710 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10510 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10520 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_08700 putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:duc01000]
C 01001 Protein kinases [BR:duc01001]
D UCH007_01220 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D UCH007_09960 rdhC; two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D UCH007_02100 rdhC; two-component sensor histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D UCH007_13420 rdhC; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D UCH007_03630 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UCH007_05800 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UCH007_10590 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D UCH007_01120 putative sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:duc01009]
D UCH007_04410 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
C 01002 Peptidases and inhibitors [BR:duc01002]
D UCH007_11360 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D UCH007_11240 pilD; type IV prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UCH007_00960 Ni/Fe hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D UCH007_07020 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D UCH007_11750 purF; putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UCH007_04590 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UCH007_01040 putative C56 family peptidase K03152 thiJ; protein deglycase [EC:3.5.1.124]
D UCH007_06460 hypothetical protein K07052 K07052; CAAX protease family protein
D UCH007_08650 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D UCH007_04260 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D UCH007_05990 putative M24B family peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D UCH007_07430 putative M29 family peptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D UCH007_03250 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UCH007_13210 putative ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UCH007_14580 htpX; protease HtpX homolog K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D UCH007_03070 putative M50B family peptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D UCH007_09220 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D UCH007_08710 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10510 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10520 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_08700 putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_01640 putative S8 family peptidase K17734 aprX; serine protease AprX [EC:3.4.21.-]
D UCH007_05940 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D UCH007_15070 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D UCH007_09420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UCH007_01350 putative alpha/beta hydrolase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D UCH007_03010 carboxy-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D UCH007_04540 putative peptidase K03592 pmbA; PmbA protein
C 01003 Glycosyltransferases [BR:duc01003]
D UCH007_02330 putative glycosyltransferase K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356]
D UCH007_08170 putative glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D UCH007_11250 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:duc01005]
D UCH007_02370 hypothetical protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:duc01011]
D UCH007_05510 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
C 01004 Lipid biosynthesis proteins [BR:duc01004]
D UCH007_10420 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UCH007_08020 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UCH007_10430 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UCH007_10380 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D UCH007_09580 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UCH007_08680 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_07780 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_04710 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UCH007_11570 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_12000 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_08040 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_00080 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UCH007_14800 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:duc01006]
D UCH007_03240 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D UCH007_03100 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D UCH007_06180 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UCH007_03350 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:duc01007]
D UCH007_11270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UCH007_05250 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UCH007_11060 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UCH007_00570 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UCH007_10360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UCH007_03230 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UCH007_08720 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UCH007_03620 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UCH007_02240 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UCH007_05030 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UCH007_05920 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UCH007_07120 hisZ; ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UCH007_00060 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UCH007_06600 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UCH007_05020 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UCH007_03050 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UCH007_06280 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UCH007_00480 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UCH007_03020 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UCH007_03030 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UCH007_06160 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D UCH007_11050 aspC; aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D UCH007_05740 cobD; cobalamin biosynthesis protein CobD K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_07090 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UCH007_10250 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D UCH007_00090 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:duc00194]
D UCH007_04910 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UCH007_04900 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UCH007_04890 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UCH007_04880 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UCH007_04870 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UCH007_04860 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UCH007_04850 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UCH007_04840 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UCH007_04830 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:duc03000]
D UCH007_14500 putative TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D UCH007_11970 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D UCH007_13840 rdhR; MarR family transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D UCH007_13650 rdhR; putative MarR family transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D UCH007_12330 rdhR; MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D UCH007_09940 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_13490 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_13530 rdhR; putative MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_13720 rdhR; putative MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_13770 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_13950 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_14140 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_14200 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_08580 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_09880 rdhR; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UCH007_11720 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D UCH007_10530 putative MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D UCH007_05520 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D UCH007_09270 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D UCH007_00190 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D UCH007_12480 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D UCH007_14640 putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D UCH007_08400 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D UCH007_01770 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D UCH007_10160 putative ArsR family transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D UCH007_06770 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D UCH007_07150 birA; biotin protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D UCH007_01430 putative Xre family DNA-binding protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D UCH007_08000 hypothetical protein K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI
D UCH007_11010 putative Xre family DNA-binding protein K07729 K07729; putative transcriptional regulator
D UCH007_01440 putative Xre family DNA-binding protein K07729 K07729; putative transcriptional regulator
D UCH007_04760 putative Xre family DNA binding protein K07729 K07729; putative transcriptional regulator
D UCH007_12430 putative transcriptional regulator K07730 K07730; putative transcriptional regulator
D UCH007_14660 iron-sulfur binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D UCH007_14670 iron-sulfur binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D UCH007_12940 vcrC; transcriptional regulator VcrC K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D UCH007_08450 iron-sulfur binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D UCH007_01790 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D UCH007_12550 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_12740 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_13000 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_12900 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_11620 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D UCH007_09470 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D UCH007_07940 DNA-binding protein K07733 alpA; prophage regulatory protein
D UCH007_11350 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D UCH007_02800 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D UCH007_02750 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:duc03021]
D UCH007_04310 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UCH007_05270 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UCH007_05280 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UCH007_04780 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D UCH007_08240 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D UCH007_10440 nusB; antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D UCH007_08330 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D UCH007_11350 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D UCH007_06430 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D UCH007_11680 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:duc03019]
D UCH007_08610 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UCH007_02040 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UCH007_03700 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UCH007_14770 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UCH007_02140 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D UCH007_05170 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UCH007_08090 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UCH007_11680 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D UCH007_11600 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D UCH007_11890 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UCH007_02700 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:duc03011]
D UCH007_03140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UCH007_04110 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UCH007_04300 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UCH007_04210 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UCH007_08800 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UCH007_04020 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UCH007_04180 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UCH007_04350 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UCH007_04040 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UCH007_04290 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UCH007_04010 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UCH007_04280 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UCH007_08080 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UCH007_04940 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UCH007_04140 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D UCH007_08780 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UCH007_04090 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D UCH007_15060 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D UCH007_02850 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UCH007_08310 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UCH007_04080 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D UCH007_04050 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UCH007_04060 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UCH007_04170 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UCH007_04190 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UCH007_04690 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UCH007_08300 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UCH007_08320 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UCH007_08290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UCH007_04340 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UCH007_04150 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UCH007_04230 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D UCH007_04120 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UCH007_04320 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UCH007_04200 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D UCH007_02730 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UCH007_06250 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UCH007_10890 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UCH007_04100 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D UCH007_04070 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UCH007_04160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UCH007_10900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UCH007_10290 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UCH007_04130 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UCH007_04220 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D UCH007_10910 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UCH007_10410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UCH007_08350 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UCH007_08770 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D UCH007_06260 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UCH007_12070 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UCH007_r0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UCH007_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:duc03009]
D UCH007_08610 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UCH007_00020 obg; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D UCH007_11350 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D UCH007_08240 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D UCH007_10440 nusB; antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D UCH007_08330 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D UCH007_03380 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D UCH007_02190 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D UCH007_06490 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D UCH007_02760 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D UCH007_03210 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D UCH007_08980 putative 23S rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D UCH007_06620 rluB; putative ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D UCH007_11370 rluD; putative ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UCH007_05310 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D UCH007_12200 hypothetical protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D UCH007_04920 rimM; putative 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D UCH007_00490 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D UCH007_11560 der; GTPase Der K03977 engA; GTPase
D UCH007_06140 hflX; GTPase HflX K03665 hflX; GTPase
D UCH007_07010 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D UCH007_00050 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D UCH007_08210 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D UCH007_03270 hypothetical protein K09710 ybeB; ribosome-associated protein
D UCH007_11320 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D UCH007_12120 hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D UCH007_00430 putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D UCH007_10400 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:duc03016]
D UCH007_03430 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D UCH007_06890 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D UCH007_06880 protein archease K24956 ZBTB8OS; protein archease
D UCH007_11270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UCH007_03050 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UCH007_08720 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UCH007_02240 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UCH007_03230 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UCH007_10360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UCH007_05030 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UCH007_05920 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UCH007_00480 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UCH007_06600 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UCH007_06280 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UCH007_05020 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UCH007_00570 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UCH007_03620 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UCH007_07120 hisZ; ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UCH007_00060 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UCH007_03020 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UCH007_03030 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UCH007_05250 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UCH007_11060 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UCH007_00180 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D UCH007_03870 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UCH007_05340 putative methyltransferase K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
D UCH007_04330 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D UCH007_08200 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D UCH007_05350 acetyltransferase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D UCH007_07010 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D UCH007_06180 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UCH007_08760 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D UCH007_10550 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D UCH007_12090 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D UCH007_11460 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D UCH007_08010 hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D UCH007_02740 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D UCH007_06520 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UCH007_06690 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D UCH007_01940 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D UCH007_14740 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D UCH007_13990 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_13410 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_13610 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_13670 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_13740 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_13880 pceA; putative tetrachloroethene reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_13970 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_14130 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_09900 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_12320 rdhA; putative reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_05300 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D UCH007_00500 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D UCH007_11820 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D UCH007_11870 putative tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D UCH007_03300 putative hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D UCH007_08090 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:duc03012]
D UCH007_08220 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UCH007_06270 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D UCH007_02530 putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D UCH007_03130 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D UCH007_08360 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D UCH007_04030 fusA; elongation factor G K02355 fusA; elongation factor G
D UCH007_09610 fusA; elongation factor G K02355 fusA; elongation factor G
D UCH007_09590 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D UCH007_03110 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D UCH007_09600 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D UCH007_05190 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D UCH007_04270 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D UCH007_07350 efp; elongation factor P K02356 efp; elongation factor P
D UCH007_05980 efp; elongation factor P K02356 efp; elongation factor P
D UCH007_07340 lysS; lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D UCH007_04960 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:duc03110]
D UCH007_11730 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D UCH007_00520 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D UCH007_11600 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D UCH007_11890 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UCH007_11590 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D UCH007_11710 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D UCH007_11610 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D UCH007_07850 putative small heat shock protein K13993 HSP20; HSP20 family protein
D UCH007_11880 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D UCH007_08710 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10510 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_10520 putative S1B family peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_08700 putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UCH007_03250 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UCH007_13210 putative ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UCH007_04840 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UCH007_11910 hypA; putative hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D UCH007_11920 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D UCH007_05790 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:duc04131]
D UCH007_03280 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UCH007_05150 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:duc03032]
D UCH007_02980 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UCH007_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D UCH007_04680 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UCH007_04660 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D UCH007_04790 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D UCH007_08790 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_00690 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_12170 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UCH007_09750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_01810 DNA polymerase sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_00450 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UCH007_04630 holB; putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UCH007_05100 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UCH007_06530 rnhB; putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UCH007_11510 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UCH007_05200 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UCH007_14980 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UCH007_00040 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UCH007_06010 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:duc03036]
D UCH007_08610 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UCH007_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D UCH007_05580 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UCH007_02770 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UCH007_03710 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D UCH007_05570 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UCH007_02780 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UCH007_12550 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_12740 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_13000 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_12900 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_06490 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D UCH007_00840 putative recombinase K03733 xerC; integrase/recombinase XerC
D UCH007_00580 putative recombinase K03733 xerC; integrase/recombinase XerC
D UCH007_01720 putative recombinase K04763 xerD; integrase/recombinase XerD
D UCH007_09640 xerC; tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D UCH007_00910 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UCH007_13390 Fic-family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:duc03400]
D UCH007_12130 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UCH007_07670 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D UCH007_10560 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UCH007_03490 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UCH007_03690 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D UCH007_11490 mutM; formamidopyrimidine-DNA glycolase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D UCH007_03260 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D UCH007_04950 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D UCH007_08030 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UCH007_05200 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UCH007_11510 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UCH007_04740 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D UCH007_03730 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D UCH007_09650 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D UCH007_09460 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UCH007_05270 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UCH007_05280 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UCH007_04310 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UCH007_10470 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D UCH007_09680 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D UCH007_09450 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D UCH007_12170 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UCH007_09750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_01810 DNA polymerase sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UCH007_00450 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UCH007_04630 holB; putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UCH007_05100 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UCH007_08790 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_00690 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_14750 recA; RecA protein K03553 recA; recombination protein RecA
D UCH007_03740 ruvA; Holliday junction ATP-dependent DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D UCH007_05290 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UCH007_01490 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UCH007_03750 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D UCH007_02720 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D UCH007_04770 sbcC; nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D UCH007_06610 sbcD; nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D UCH007_00540 radA; putative DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D UCH007_10350 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UCH007_05050 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D UCH007_05080 recR; recombination protein RecR K06187 recR; recombination protein RecR
D UCH007_08850 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D UCH007_13320 cas1; putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D UCH007_07160 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D UCH007_14980 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UCH007_00040 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UCH007_06010 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D UCH007_00100 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D UCH007_13090 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D UCH007_15070 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D UCH007_13070 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D UCH007_14760 recX; regulatory protein RecX K03565 recX; regulatory protein
D UCH007_00780 putative ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_05450 putative ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UCH007_02810 nrdJ; vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:duc03029]
D UCH007_08220 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UCH007_06270 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D UCH007_03130 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D UCH007_08360 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D UCH007_04030 fusA; elongation factor G K02355 fusA; elongation factor G
D UCH007_09610 fusA; elongation factor G K02355 fusA; elongation factor G
D UCH007_05250 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UCH007_02240 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UCH007_05920 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UCH007_06600 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D UCH007_10360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UCH007_10980 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UCH007_14320 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UCH007_10970 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UCH007_08790 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_00690 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UCH007_11600 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D UCH007_11610 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D UCH007_11890 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UCH007_11880 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D UCH007_11590 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D UCH007_11710 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D UCH007_00910 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UCH007_08740 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:duc02000]
D UCH007_09300 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D UCH007_09310 putative ABC transporter permease protein/ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D UCH007_14080 putative ABC transporter permease protein/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D UCH007_01240 pstS; phosphate ABC transporter substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UCH007_01250 pstC; phosphate ABC transporter permease protein K02037 pstC; phosphate transport system permease protein
D UCH007_01260 pstA; phosphate ABC transporter permease protein K02038 pstA; phosphate transport system permease protein
D UCH007_01270 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UCH007_07740 ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UCH007_07750 ABC transporter substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D UCH007_07770 ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D UCH007_07760 ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D UCH007_07700 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D UCH007_07730 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D UCH007_03530 amino acid ABC transporter substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D UCH007_03520 amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D UCH007_03510 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D UCH007_08940 oligopeptide ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_04990 putative ABC transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UCH007_08930 oligopeptide ABC transporter permease protein K15581 oppB; oligopeptide transport system permease protein
D UCH007_08920 oligopeptide ABC transporter permease protein K15582 oppC; oligopeptide transport system permease protein
D UCH007_08910 oligopeptide ABC transporter ATP binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UCH007_08900 oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UCH007_12390 peptide ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UCH007_12380 peptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D UCH007_12370 putative peptide ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D UCH007_12360 putative peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D UCH007_12350 putative peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D UCH007_06840 putative ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D UCH007_05690 btuF; vitamin B12 ABC transporter substrate binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D UCH007_05700 btuC; vitamin B12 ABC transporter permease protein K25027 btuC; cobalamin transport system permease protein
D UCH007_05710 btuD; vitamin B12 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D UCH007_05530 cation ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein
D UCH007_05550 cation ABC transporter permease protein K09816 znuB; zinc transport system permease protein
D UCH007_05540 cation ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D UCH007_09340 bioY; biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D UCH007_03450 putative ABC transporter permease protein K09694 nodJ; lipooligosaccharide transport system permease protein
D UCH007_03440 putative ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D UCH007_04470 putative ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_07180 molybdenum ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_11030 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_06810 putative ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_01000 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_14890 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_01010 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_06680 putative ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UCH007_04480 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_07170 molybdenum ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_11020 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_06670 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_06800 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_01020 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_14880 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UCH007_06820 putative ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D UCH007_03420 putative potassium channel K10716 kch; voltage-gated potassium channel
D UCH007_09040 ammonium transporter K03320 amt; ammonium transporter, Amt family
D UCH007_11480 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D UCH007_14490 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D UCH007_03550 corA; magnesium transport protein CorA K03284 corA; magnesium transporter
D UCH007_05070 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D UCH007_12420 crcB; protein CrcB homolog K06199 crcB; fluoride exporter
D UCH007_11860 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UCH007_00300 cation efflux family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D UCH007_05000 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D UCH007_14950 putative transport protein K26735 KEA4_5_6; K+:H+ antiporter
D UCH007_06030 Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D UCH007_00280 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D UCH007_00250 Trk system potassium uptake protein TrkA homolog K03499 trkA; trk/ktr system potassium uptake protein
D UCH007_00260 putative Trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D UCH007_00290 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D UCH007_10100 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D UCH007_03560 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D UCH007_12030 MarC family protein K05595 marC; multiple antibiotic resistance protein
D UCH007_01780 putative nickel/cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D UCH007_06300 hypothetical protein K03646 tolA; colicin import membrane protein
D UCH007_06390 hppA; pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D UCH007_06570 hppA; pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D UCH007_05410 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein
D UCH007_12470 feoA; putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D UCH007_12460 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D UCH007_06950 MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:duc02044]
D UCH007_11140 pilB; type IV pilus assembly protein PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D UCH007_11240 pilD; type IV prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UCH007_11230 general secretion protein K02650 pilA; type IV pilus assembly protein PilA
D UCH007_01200 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D UCH007_11150 gspF; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D UCH007_11210 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D UCH007_07540 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UCH007_10220 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UCH007_11220 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UCH007_00240 comEA; putative competence protein ComEA K02237 comEA; competence protein ComEA
D UCH007_03470 dcd; putative dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D UCH007_00230 comEC; putative competence protein ComEC K02238 comEC; competence protein ComEC
D UCH007_03660 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UCH007_02690 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D UCH007_08340 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UCH007_02680 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D UCH007_14310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UCH007_04240 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UCH007_11450 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D UCH007_08740 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UCH007_14690 tatB; Sec-independent protein translocase TatB K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14700 tatAE; Sec-independent protein translocase TatA/TatE K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14710 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D UCH007_14680 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:duc02042]
D UCH007_11860 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UCH007_02520 hypothetical protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:duc02022]
D UCH007_01220 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D UCH007_14240 rdhD; two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UCH007_09050 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UCH007_01150 putative response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UCH007_09960 rdhC; two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D UCH007_00790 rdhD; putative response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D UCH007_13680 rdhD; two-component transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D UCH007_02100 rdhC; two-component sensor histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D UCH007_13420 rdhC; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D UCH007_13890 rdhD; putative two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UCH007_00830 rdhD; putative two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UCH007_13430 rdhD; two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D UCH007_03630 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UCH007_05800 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UCH007_11130 putative response regulator K07692 degU; two-component system, NarL family, response regulator DegU
D UCH007_03640 two-component response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D UCH007_10590 two-component sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D UCH007_01120 putative sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:duc02035]
D UCH007_07540 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UCH007_10220 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UCH007_11220 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D UCH007_11230 general secretion protein K02650 pilA; type IV pilus assembly protein PilA
D UCH007_01200 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D UCH007_11150 gspF; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D UCH007_11240 pilD; type IV prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UCH007_11210 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:duc04812]
D UCH007_10770 hypothetical protein K06990 MEMO1; MEMO1 family protein
D UCH007_05570 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UCH007_02780 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UCH007_05580 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UCH007_02770 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UCH007_05140 putative GTPase K22222 cetZ; tubulin-like protein CetZ
D UCH007_08840 putative GTPase K22222 cetZ; tubulin-like protein CetZ
D UCH007_12550 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_12740 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_13000 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UCH007_12900 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:duc04147]
D UCH007_05170 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UCH007_05150 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UCH007_06210 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UCH007_14530 putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D UCH007_11890 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UCH007_11600 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D UCH007_03200 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D UCH007_08360 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D UCH007_03870 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UCH007_08680 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_07780 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UCH007_04410 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D UCH007_04250 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UCH007_10280 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UCH007_10270 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UCH007_09020 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_13560 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UCH007_05230 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UCH007_11780 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UCH007_06190 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:duc02048]
D UCH007_13320 cas1; putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D UCH007_13330 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D UCH007_13260 putative CRISPR-associated helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D UCH007_13270 putative CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA
D UCH007_13280 putative CRISPR-associated protein K19046 casB; CRISPR system Cascade subunit CasB
D UCH007_13290 putative CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC
D UCH007_13300 putative CRISPR-associated protein K19125 casD; CRISPR system Cascade subunit CasD
D UCH007_13310 casE; putative CRISPR-associated protein CasE K19126 casE; CRISPR system Cascade subunit CasE
D UCH007_01880 hsdR; type I restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D UCH007_01910 hsdS; type I restriction-modification system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D UCH007_01920 hsdM; type I restriction-modification system modification subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D UCH007_09770 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D UCH007_05570 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UCH007_02780 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UCH007_11270 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D UCH007_12590 hypothetical protein K19170 dndC; DNA sulfur modification protein DndC
D UCH007_12780 hypothetical protein K19170 dndC; DNA sulfur modification protein DndC
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:duc01504]
D UCH007_09330 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D UCH007_09960 rdhC; two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:duc03100]
D UCH007_t0440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UCH007_t0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UCH007_t0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UCH007_t0450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0130 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0090 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UCH007_t0190 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UCH007_t0310 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UCH007_t0380 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D UCH007_t0180 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UCH007_t0300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UCH007_t0290 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UCH007_t0460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UCH007_t0370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0210 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0430 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UCH007_t0240 tRNA-His K14226 tRNA-His; tRNA His
D UCH007_t0280 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UCH007_t0360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UCH007_t0200 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UCH007_t0220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UCH007_t0330 tRNA-Met K14230 tRNA-Met; tRNA Met
D UCH007_t0120 tRNA-Met K14230 tRNA-Met; tRNA Met
D UCH007_t0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D UCH007_t0160 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UCH007_t0470 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UCH007_t0150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UCH007_t0100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UCH007_t0340 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UCH007_t0270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UCH007_t0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UCH007_t0250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UCH007_t0350 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D UCH007_t0260 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UCH007_t0420 tRNA-Val K14237 tRNA-Val; tRNA Val
D UCH007_t0320 tRNA-Val K14237 tRNA-Val; tRNA Val
D UCH007_t0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D UCH007_r0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UCH007_r0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D UCH007_07790 iorA; indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D UCH007_07800 iorB; indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D UCH007_10110 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D UCH007_10120 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D UCH007_02290 hypothetical protein K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]
D UCH007_00350 sudB; putative sulfide dehydrogenase subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D UCH007_01290 arsC; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D UCH007_10780 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D UCH007_05440 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D UCH007_11300 hypothetical protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D UCH007_14460 hycC; hydrogenase subunit HycC K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D UCH007_14440 putative hydrogenase subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D UCH007_14430 putative hydrogenase subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D UCH007_09660 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D UCH007_08380 putative glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D UCH007_02410 putative glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D UCH007_08050 lgt; putative prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D UCH007_14650 putative thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D UCH007_10300 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D UCH007_14790 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D UCH007_14010 rdhD; response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D UCH007_07660 putative DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D UCH007_01950 hypothetical protein K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D UCH007_06340 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D UCH007_09200 glycosyl transferase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UCH007_08820 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D UCH007_14300 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D UCH007_03590 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D UCH007_01760 putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D UCH007_07820 putative iron-sulfur cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D UCH007_07250 echA; Ech hydrogenase subunit A K14086 echA; ech hydrogenase subunit A
D UCH007_07260 echB; Ech hydrogenase subunit B K14087 echB; ech hydrogenase subunit B
D UCH007_07270 echC; Ech hydrogenase subunit C K14088 echC; ech hydrogenase subunit C
D UCH007_07320 echE; Ech hydrogenase subunit E K14090 echE; ech hydrogenase subunit E
D UCH007_07330 echF; Ech hydrogenase subunit F K14091 echF; ech hydrogenase subunit F
C 99983 Lipid metabolism
D UCH007_10310 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D UCH007_03540 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D UCH007_10320 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D UCH007_06320 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D UCH007_09250 hypothetical protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D UCH007_00340 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D UCH007_08950 ribonuclease K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D UCH007_05930 tig; trigger factor K03545 tig; trigger factor
D UCH007_02160 fdhE; formate dehydrogenase accessory protein K02380 fdhE; FdhE protein
D UCH007_12490 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D UCH007_11940 hypC; hydrogenase formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D UCH007_11950 hypD; hydrogenase maturation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D UCH007_11960 hypE; hydrogenase formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D UCH007_14630 AIR synthase-related protein K04655 hypE; hydrogenase expression/formation protein HypE
D UCH007_11930 hypF; hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D UCH007_02280 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH
D UCH007_08250 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D UCH007_13130 hypothetical protein K07445 K07445; putative DNA methylase
D UCH007_12150 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D UCH007_04980 radC; putative DNA repair protein RadC K03630 radC; DNA repair protein RadC
D UCH007_14810 putative DNA glycosylase K07457 K07457; endonuclease III related protein
D UCH007_06540 hypothetical protein K07460 yraN; putative endonuclease
D UCH007_05420 hypothetical protein K07465 K07465; putative RecB family exonuclease
D UCH007_06020 putative DNA processing protein K04096 smf; DNA processing protein
D UCH007_04670 hypothetical protein K02086 dnaD; DNA replication protein
D UCH007_06560 translin family protein K07477 K07477; translin
D UCH007_10740 ATPase K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D UCH007_05090 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D UCH007_00320 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D UCH007_05870 acsF; putative nickel-insertion accessory protein K07321 cooC; CO dehydrogenase maturation factor
D UCH007_08730 hypothetical protein K06346 jag; spoIIIJ-associated protein
D UCH007_09620 putative membrane protein K06384 spoIIM; stage II sporulation protein M
D UCH007_12970 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D UCH007_09760 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D UCH007_12500 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D UCH007_12690 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D UCH007_12850 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D UCH007_01410 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
D UCH007_10140 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D UCH007_10640 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D UCH007_10810 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D UCH007_01280 phoU; phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D UCH007_14600 cutA; putative divalent-cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D UCH007_10170 putative membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D UCH007_02220 putative CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D UCH007_08060 putative ATP-dependent helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D UCH007_07370 hypothetical membrane protein K06994 K06994; putative drug exporter of the RND superfamily
D UCH007_02600 hypothetical protein K07001 K07001; NTE family protein
D UCH007_04610 putative HAD-hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D UCH007_06830 SufBD family protein K09014 sufB; Fe-S cluster assembly protein SufB
D UCH007_06630 phosphoribosyl transferase domain-containing protein K07100 K07100; putative phosphoribosyl transferase
D UCH007_06370 putative S9 family peptidase K07100 K07100; putative phosphoribosyl transferase
D UCH007_07440 hypothetical protein K07100 K07100; putative phosphoribosyl transferase
D UCH007_14570 hypothetical protein K03744 lemA; LemA protein
D UCH007_09210 putative membrane protein K03975 dedA; membrane-associated protein
D UCH007_07830 hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D UCH007_02480 hypothetical protein K06933 K06933; uncharacterized protein
D UCH007_14910 hypothetical protein K06934 K06934; uncharacterized protein
D UCH007_05480 hypothetical protein K06940 K06940; uncharacterized protein
D UCH007_04930 hypothetical protein K06960 K06960; uncharacterized protein
D UCH007_15050 putative membrane protein K06973 K06973; uncharacterized protein
D UCH007_04420 hypothetical protein K07028 K07028; uncharacterized protein
D UCH007_14050 hypothetical protein K07034 K07034; uncharacterized protein
D UCH007_12080 putative hydrolase K07045 K07045; uncharacterized protein
D UCH007_08410 hypothetical protein K07089 K07089; uncharacterized protein
D UCH007_05330 hypothetical protein K07089 K07089; uncharacterized protein
D UCH007_04530 hypothetical protein K07159 K07159; uncharacterized protein
D UCH007_07480 hypothetical protein K07159 K07159; uncharacterized protein
D UCH007_02970 hypothetical protein K07164 K07164; uncharacterized protein
D UCH007_04820 hypothetical protein K08999 K08999; uncharacterized protein
D UCH007_02840 hypothetical protein K09117 K09117; uncharacterized protein
D UCH007_03580 hypothetical protein K09122 K09122; uncharacterized protein
D UCH007_10580 hypothetical protein K09131 K09131; uncharacterized protein
D UCH007_07510 hypothetical protein K09740 K09740; uncharacterized protein
D UCH007_08070 hypothetical protein K09764 K09764; uncharacterized protein
D UCH007_09410 hypothetical protein K09807 K09807; uncharacterized protein
D UCH007_10720 hypothetical protein K09946 K09946; uncharacterized protein
D UCH007_14560 hypothetical protein K09981 K09981; uncharacterized protein
D UCH007_11650 exonuclease K07502 yprB; uncharacterized protein
D UCH007_00310 hypothetical protein K07220 K07220; uncharacterized protein
D UCH007_08230 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024