+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Escherichia coli O157:H7 EDL933 (EHEC)
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D Z2389 putative DNA modification methyltransferase encoded within prophage CP-933R K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Z3054 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E Z3848 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
D Z2013 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator K03746 hns; DNA-binding protein H-NS
D Z3968 stpA; DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing K11685 stpA; DNA-binding protein StpA
C HU (heat unstable protein)
D Z5576 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D Z0547 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
D Z2741 himA; integration host factor (IHF), alpha subunit; site specific recombination K04764 ihfA; integration host factor subunit alpha
D Z1258 himD; integration host factor (IHF), beta subunit; site-specific recombination K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D Z1418 cbpA; curved DNA-binding protein; functions closely related to DnaJ K05516 cbpA; curved DNA-binding protein
D Z1417 yccD; orf, hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D Z5999 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Z5193 dnaA; DNA biosynthesis; initiation of chromosome replication; can be transcription regulator K02313 dnaA; chromosomal replication initiator protein
D Z4508 yraO; orf, hypothetical protein K12961 diaA; DnaA initiator-associating protein
D Z1318 yccV; hypothetical protein K11940 hspQ; heat shock protein HspQ
D Z1034 dps; global regulator, starvation conditions K04047 dps; starvation-inducible DNA-binding protein
D Z4621 fis; site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Z5779 hfq; host factor I for bacteriophage Q beta replication, a growth-related protein K03666 hfq; host factor-I protein
D Z4253 iciA; replication initiation inhibitor, binds to 13-mers at oriC K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Z1234 lrp; regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Z3445 yejK; orf, hypothetical protein K06899 ndpA; nucleoid-associated protein
B Chromosome partitioning proteins
C MukBEF complex
D Z1271 mukB; kinesin-like cell division protein involved in chromosome partitioning K03632 mukB; chromosome partition protein MukB
D Z1270 mukE; orf, hypothetical protein K03804 mukE; chromosome partition protein MukE
D Z1269 mukF; mukF protein (killing factor KICB) K03633 mukF; chromosome partition protein MukF
C Condensin-like complex
C Divisome proteins
D Z0104 ftsA; ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes K03590 ftsA; cell division protein FtsA
D Z4056 orf, hypothetical protein K05589 ftsB; cell division protein FtsB
D Z4837 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D Z0094 ftsI; septum formation; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Z1235 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Z0093 ftsL; cell division protein; ingrowth of wall at septum K03586 ftsL; cell division protein FtsL
D Z5480 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D Z0103 ftsQ; cell division protein; ingrowth of wall at septum K03589 ftsQ; cell division protein FtsQ
D Z0099 ftsW; cell division; membrane protein involved in shape determination K03588 ftsW; cell division protein FtsW
D Z4836 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D Z0105 ftsZ; cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D Z3678 zipA; cell division protein involved in FtsZ ring K03528 zipA; cell division protein ZipA
D Z4247 ygfE; orf, hypothetical protein K09888 zapA; cell division protein ZapA
D Z5473 yiiU; orf, hypothetical protein K09892 zapB; cell division protein ZapB
D Z1295 ycbW; orf, hypothetical protein K18657 zapC; cell division protein ZapC
D Z0112 yacF; orf, hypothetical protein K18778 zapD; cell division protein ZapD
D Z4591 yhcM; hypothetical protein K06916 zapE; cell division protein ZapE
D Z5817 ytfB; orf, hypothetical protein K07269 ytfB; cell division protein YtfB
D Z5776 amiB; N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Z3700 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Z4134 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Z2509 putative efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D Z0578 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D Z1938 minC; cell division inhibitor, inhibits ftsZ ring formation K03610 minC; septum site-determining protein MinC
D Z1937 minD; cell division inhibitor, a membrane ATPase, activates minC K03609 minD; septum site-determining protein MinD
D Z1936 minE; cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation K03608 minE; cell division topological specificity factor
D Z1308 sulA; suppressor of lon; inhibits cell division and ftsZ ring formation K13053 sulA; cell division inhibitor SulA
D Z5065 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
C Other chromosome partitioning proteins
D Z0836 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D Z4610 mreB; regulator of ftsI, penicillin binding protein 3, septation function K03569 mreB; rod shape-determining protein MreB and related proteins
D Z4609 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D Z4607 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D Z0780 mrdB; rod shape-determining membrane protein; sensitivity to radiation and drugs K05837 rodA; rod shape determining protein RodA
D Z_L7068 sopA; plasmid partitioning protein K03496 parA; chromosome partitioning protein
D Z_L7069 sopB; plasmid partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Z_L7086 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Z4373 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Z4387 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Z5241 gidA; glucose-inhibited division; chromosome replication K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Z5240 gidB; glucose-inhibited division; chromosome replication K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Z5328 xerC; site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division K03733 xerC; integrase/recombinase XerC
D Z4232 xerD; site-specific recombinase K04763 xerD; integrase/recombinase XerD
D Z3281 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Z4722 fic; induced in stationary phase, recognized by rpoS, affects cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Z5400 yihA; orf, hypothetical protein K03978 engB; GTP-binding protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024