+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Escherichia coli O152:H28 SE11 (commensal)
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ACRISPR-Cas system
B Universal Cas proteins
C ECSE_3010 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
C ECSE_3009 conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D ECSE_3016 conserved hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D ECSE_3015 conserved hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D ECSE_3014 conserved hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D ECSE_3013 conserved hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC
D ECSE_3012 conserved hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D ECSE_3011 conserved hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D ECSE_3648 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D ECSE_3543 putative methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECSE_2077 putative phage DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECSE_P2-0027 conserved hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECSE_P1-0047 conserved hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ECSE_2191 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C ECSE_4574 putative restriction endonuclease K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D ECSE_3831 conserved hypothetical protein K18920 hokA; protein HokA
D ECSE_1880 hypothetical protein K18920 hokA; protein HokA
D ECSE_0015 phage maintenance protein K18919 hokC_D; protein HokC/D
D ECSE_1678 hypothetical phage protein K18919 hokC_D; protein HokC/D
D ECSE_0647 conserved hypothetical protein K18922 hokE; protein HokE
D ECSE_0646 conserved hypothetical protein K18922 hokE; protein HokE
D ECSE_3017 conserved hypothetical protein K18922 hokE; protein HokE
C SymE-SymR
C Ldr-Rdl
D ECSE_1266 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D ECSE_1267 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D ECSE_1268 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D ECSE_3808 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D ECSE_3809 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D ECSE_3810 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
D ECSE_1401 hypothetical phage protein K19780 ralA; antisense regulator of RalR protein
B Type II TA system
C MazF-MazE
D ECSE_3040 putative growth inhibitor protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ECSE_3041 suppressor of inhibitor protein K07172 mazE; antitoxin MazE
C ChpB-ChpS
D ECSE_4530 putative transcriptional regulator K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D ECSE_4529 conserved hypothetical protein K18842 chpS; antitoxin ChpS
C YhaV-PrlF
D ECSE_3414 conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D ECSE_3413 conserved hypothetical protein K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
D ECSE_0246 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D ECSE_0247 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
D ECSE_2290 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D ECSE_2291 conserved hypothetical protein K19159 yefM; antitoxin YefM
C HipA-HipB
D ECSE_1598 transcriptional repressor K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D ECSE_1599 transcriptional repressor K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
D ECSE_1520 conserved hypothetical protein K18843 hicB; antitoxin HicB
C YafO-YafN
C Hha-TomB
D ECSE_0485 haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D ECSE_P1-0082 putative regulator protein K05839 hha; haemolysin expression modulating protein
D ECSE_0486 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D ECSE_1358 phage shock protein C K03973 pspC; phage shock protein C
D ECSE_1357 phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
D ECSE_P2-0011 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D ECSE_P2-0010 conserved hypothetical protein K19164 ccdA; antitoxin CcdA
C ParE-ParD
D ECSE_2355 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D ECSE_P3-0010 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D ECSE_2354 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D ECSE_P3-0009 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
C HigB-HigA
D ECSE_3363 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECSE_0508 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1
D ECSE_1566 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
D ECSE_2758 conserved hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D ECSE_P3-0052 conserved hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D ECSE_P3-0053 conserved hypothetical protein K18829 mvpT; antitoxin VapB
D ECSE_2759 conserved hypothetical protein K18829 mvpT; antitoxin VapB
C PezT-PezA
D ECSE_4312 conserved hypothetical protein K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D ECSE_4557 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D ECSE_0862 conserved hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D ECSE_1123 conserved hypothetical protein K12148 bssS; biofilm regulator BssS
D ECSE_0894 conserved hypothetical protein K19688 bssR; biofilm regulator BssR
D ECSE_1177 conserved hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D ECSE_0097 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ECSE_3530 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ECSE_3303 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D ECSE_3311 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D ECSE_2693 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
D ECSE_0299 hypothetical phage protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D ECSE_0298 hypothetical phage protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
C CptA-CptB
D ECSE_3159 conserved hypothetical protein K19168 cptA; toxin CptA
D ECSE_3160 conserved hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
D ECSE_4427 conserved hypothetical protein K18839 ghoT; toxin GhoT
D ECSE_4426 conserved hypothetical protein K18840 ghoS; antitoxin GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C ECSE_2816 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C ECSE_4579 conserved hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
C ECSE_4578 putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase K19170 dndC; DNA sulfur modification protein DndC
C ECSE_4577 conserved hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
C ECSE_4576 hypothetical protein K19172 dndE; DNA sulfur modification protein DndE
B DNA phosphorothioation-dependent restriction proteins
C ECSE_4571 hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
C ECSE_4572 hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
C ECSE_4573 hypothetical protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023