+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Escherichia coli O152:H28 SE11 (commensal)

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ACRISPR-Cas system B Universal Cas proteins C ECSE_3010 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 C ECSE_3009 conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D ECSE_3016 conserved hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors D ECSE_3015 conserved hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA D ECSE_3014 conserved hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D ECSE_3013 conserved hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC D ECSE_3012 conserved hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD D ECSE_3011 conserved hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases D ECSE_3648 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ECSE_3543 putative methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D ECSE_2077 putative phage DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D ECSE_P2-0027 conserved hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D ECSE_P1-0047 conserved hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D ECSE_2191 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C ECSE_4574 putative restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok D ECSE_3831 conserved hypothetical protein K18920 hokA; protein HokA D ECSE_1880 hypothetical protein K18920 hokA; protein HokA D ECSE_0015 phage maintenance protein K18919 hokC_D; protein HokC/D D ECSE_1678 hypothetical phage protein K18919 hokC_D; protein HokC/D D ECSE_0647 conserved hypothetical protein K18922 hokE; protein HokE D ECSE_0646 conserved hypothetical protein K18922 hokE; protein HokE D ECSE_3017 conserved hypothetical protein K18922 hokE; protein HokE C SymE-SymR C Ldr-Rdl D ECSE_1266 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D ECSE_1267 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D ECSE_1268 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D ECSE_3808 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D ECSE_3809 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D ECSE_3810 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA D ECSE_1401 hypothetical phage protein K19780 ralA; antisense regulator of RalR protein B Type II TA system C MazF-MazE D ECSE_3040 putative growth inhibitor protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D ECSE_3041 suppressor of inhibitor protein K07172 mazE; antitoxin MazE C ChpB-ChpS D ECSE_4530 putative transcriptional regulator K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D ECSE_4529 conserved hypothetical protein K18842 chpS; antitoxin ChpS C YhaV-PrlF D ECSE_3414 conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D ECSE_3413 conserved hypothetical protein K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D ECSE_0246 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D ECSE_0247 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D ECSE_2290 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D ECSE_2291 conserved hypothetical protein K19159 yefM; antitoxin YefM C HipA-HipB D ECSE_1598 transcriptional repressor K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ECSE_1599 transcriptional repressor K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB D ECSE_1520 conserved hypothetical protein K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB D ECSE_0485 haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein D ECSE_P1-0082 putative regulator protein K05839 hha; haemolysin expression modulating protein D ECSE_0486 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB C PspC-PspB D ECSE_1358 phage shock protein C K03973 pspC; phage shock protein C D ECSE_1357 phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA D ECSE_P2-0011 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D ECSE_P2-0010 conserved hypothetical protein K19164 ccdA; antitoxin CcdA C ParE-ParD D ECSE_2355 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D ECSE_P3-0010 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D ECSE_2354 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D ECSE_P3-0009 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA D ECSE_3363 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D ECSE_0508 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1 D ECSE_1566 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB D ECSE_2758 conserved hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D ECSE_P3-0052 conserved hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D ECSE_P3-0053 conserved hypothetical protein K18829 mvpT; antitoxin VapB D ECSE_2759 conserved hypothetical protein K18829 mvpT; antitoxin VapB C PezT-PezA D ECSE_4312 conserved hypothetical protein K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176] C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D ECSE_4557 conserved hypothetical protein K19334 tabA; biofilm protein TabA D ECSE_0862 conserved hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A D ECSE_1123 conserved hypothetical protein K12148 bssS; biofilm regulator BssS D ECSE_0894 conserved hypothetical protein K19688 bssR; biofilm regulator BssR D ECSE_1177 conserved hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D ECSE_0097 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ECSE_3530 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ECSE_3303 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ECSE_3311 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ECSE_2693 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D ECSE_0299 hypothetical phage protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D ECSE_0298 hypothetical phage protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins C CptA-CptB D ECSE_3159 conserved hypothetical protein K19168 cptA; toxin CptA D ECSE_3160 conserved hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS D ECSE_4427 conserved hypothetical protein K18839 ghoT; toxin GhoT D ECSE_4426 conserved hypothetical protein K18840 ghoS; antitoxin GhoS # ADNA phosphothiolation system B Sulfur modification proteins C ECSE_2816 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C ECSE_4579 conserved hypothetical protein K19169 dndB; DNA sulfur modification protein DndB C ECSE_4578 putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase K19170 dndC; DNA sulfur modification protein DndC C ECSE_4577 conserved hypothetical protein K19171 dndD; DNA sulfur modification protein DndD C ECSE_4576 hypothetical protein K19172 dndE; DNA sulfur modification protein DndE B DNA phosphorothioation-dependent restriction proteins C ECSE_4571 hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF C ECSE_4572 hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG C ECSE_4573 hypothetical protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023