+E Ribosome biogenesis KO
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Ribosome Biogenesis - Elusimicrobium minutum
%
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D Emin_0661 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C Emin_0358 GTP-binding conserved hypothetical protein K03595 era; GTPase
C Emin_0092 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C Emin_0666 Transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
C Emin_1228 NusB anti-termination factor K03625 nusB; transcription antitermination protein NusB
C Emin_1492 NusG anti-termination factor K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D Emin_0700 Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Emin_0307 Putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Emin_1295 Conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Emin_1258 Methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Emin_1256 putative S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Emin_0512 Uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Emin_0038 putative rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D Emin_0411 rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Emin_1342 putative SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Emin_1172 Radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Emin_0038 putative rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Emin_0375 Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C Emin_1155 Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C Emin_0256 RNA modification enzyme, MiaB family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
B rRNA processing factors
C Emin_0661 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Emin_1375 Ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
B rRNA helicases
C Emin_0773 Superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C Emin_0358 GTP-binding conserved hypothetical protein K03595 era; GTPase
C Emin_0092 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C Emin_1112 GTP-binding conserved hypothetical protein K03665 hflX; GTPase
B Other maturation factors
C Emin_0511 Putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C Emin_1507 Guanosine polyphosphate pyrophosphohydrolase/synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C Emin_0674 Ribosome-binding factor K02834 rbfA; ribosome-binding factor A
C Emin_0665 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP
C Emin_0896 Domain of unknown function DUF143 K09710 ybeB; ribosome-associated protein
C Emin_0065 Hydrolase family protein K07042 ybeY; probable rRNA maturation factor
C Emin_0123 Sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
C Emin_0206 GTP-binding conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
C Emin_0656 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024