+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Agathobacter rectalis ATCC 33656

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D EUBREC_1500 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C EUBREC_1871 GTP-binding protein Era K03595 era; GTPase C EUBREC_1696 GTP1/OBG subdomain containing protein K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C EUBREC_1946 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C EUBREC_2213 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB C EUBREC_0373 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D EUBREC_1681 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D EUBREC_0242 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D EUBREC_2343 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D EUBREC_1677 site-specific DNA-methyltransferase (adenine-specific) K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D EUBREC_1902 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D EUBREC_3705 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D EUBREC_2254 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D EUBREC_0467 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D EUBREC_3271 tetrapyrrole (corrin/porphyrin) methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D EUBREC_2208 probable hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D EUBREC_1448 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D EUBREC_1761 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D EUBREC_0416 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D EUBREC_3073 putative methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D EUBREC_2342 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D EUBREC_2208 probable hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D EUBREC_2912 hypothetical RNA methyltransferase-like protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D EUBREC_3028 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D EUBREC_1397 tRNA (uracil-5-) -methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D EUBREC_1683 ribosomal large subunit pseudouridine synthase D K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D EUBREC_0472 probable 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D EUBREC_1817 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D EUBREC_1731 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D EUBREC_2219 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] B ribosomal protein modification factors C EUBREC_0838 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C EUBREC_3382 Hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C EUBREC_1508 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM C EUBREC_1675 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C EUBREC_1903 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C EUBREC_1500 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C EUBREC_1692 ribonuclease G and E K08301 rng; ribonuclease G [EC:3.1.26.-] C EUBREC_1895 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C EUBREC_1447 possible ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C EUBREC_3287 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C EUBREC_1871 GTP-binding protein Era K03595 era; GTPase C EUBREC_2338 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C EUBREC_2287 GTP-binding protein EngA K03977 engA; GTPase C EUBREC_1696 GTP1/OBG subdomain containing protein K03979 obgE; GTPase [EC:3.6.5.-] C EUBREC_1512 ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A C EUBREC_2422 small GTP-binding protein domain protein K03665 hflX; GTPase B Other maturation factors C EUBREC_0113 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C EUBREC_2931 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C EUBREC_1942 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C EUBREC_1947 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP C EUBREC_0003 Hypothetical protein K14761 rlbA; ribosome-associated protein C EUBREC_1700 iojap-related protein K09710 ybeB; ribosome-associated protein C EUBREC_1756 hypothetical protein K07042 ybeY; probable rRNA maturation factor C EUBREC_1697 hypothetical protein K07574 yhbY; RNA-binding protein C EUBREC_2942 ribosome-associated protein Y (PSrp-1) K05808 hpf; ribosome hibernation promoting factor C EUBREC_1427 translation-associated GTPase K06942 ychF; ribosome-binding ATPase C EUBREC_1495 predicted Zn-finger-like protein, possible nucleic acid binding K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024