+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Frankia alni
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ACRISPR-Cas system
B Universal Cas proteins
C FRAAL5583 Hypothetical protein K15342 cas1; CRISP-associated protein Cas1
C FRAAL0458 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
C FRAAL5584 Hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
C FRAAL0459 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D FRAAL0452 hypothetical protein; putative DEAD/DEAH box helicase domain K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D FRAAL5581 hypothetical protein; putative signal peptide K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D FRAAL5579 Hypothetical protein K19088 cst1; CRISPR-associated protein Cst1
D FRAAL5580 Hypothetical protein K19075 cst2; CRISPR-associated protein Cst2
D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D FRAAL5578 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D FRAAL5578 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
D FRAAL0453 hypothetical protein; putative IMP dehydrogenase/GMP reductase domains K19123 casA; CRISPR system Cascade subunit CasA
D FRAAL0454 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D FRAAL0455 hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC
D FRAAL0456 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D FRAAL0457 hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C FRAAL4994 Type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C FRAAL1375 Putative type I restriction enzyme (HsdR-like) (fragment) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C FRAAL1376 Putative type I restriction enzyme (hsdR-like) (fragment) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C FRAAL3318 hsdS; Type I restriction modification enzyme protein S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C FRAAL4993 Type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C FRAAL3317 hsdM; Type I restriction enzyme, M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C FRAAL4992 Restriction enzyme subunit M (methylation) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C FRAAL5425 Hypothetical protein; putative Type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D FRAAL0689 putative DNA Modification methylase (Cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C FRAAL3325 Conserved hypothetical protein; putative Restriction of methylated adenine protein K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D FRAAL5929 Hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D FRAAL1798 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D FRAAL5060 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
C YoeB-YefM
D FRAAL2443 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D FRAAL2444 conserved hypothetical protein K19159 yefM; antitoxin YefM
C HipA-HipB
D FRAAL0260 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D FRAAL2094 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
D FRAAL4988 hypothetical protein K07334 higB-1; toxin HigB-1
D FRAAL4987 Putative HTH-type transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D FRAAL0206 conserved hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D FRAAL4818 hypothetical protein K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D FRAAL2200 ftsZ; cell division protein,tubulin-like GTP-binding protein and GTPase, forms circumferential ring in cell division and participates in the septum formation (partial match) K03531 ftsZ; cell division protein FtsZ
D FRAAL1916 mreB; Rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D FRAAL5260 gltX; Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C FRAAL5862 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C FRAAL6800 nifS; Cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C FRAAL5124 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
C FRAAL2645 hypothetical protein; putative IMP dehydrogenase / GMP reductase domain K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023