+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Frankia alni

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ACRISPR-Cas system B Universal Cas proteins C FRAAL5583 Hypothetical protein K15342 cas1; CRISP-associated protein Cas1 C FRAAL0458 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 C FRAAL5584 Hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 C FRAAL0459 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D FRAAL0452 hypothetical protein; putative DEAD/DEAH box helicase domain K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D FRAAL5581 hypothetical protein; putative signal peptide K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D FRAAL5579 Hypothetical protein K19088 cst1; CRISPR-associated protein Cst1 D FRAAL5580 Hypothetical protein K19075 cst2; CRISPR-associated protein Cst2 D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D FRAAL5578 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D FRAAL5578 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors D FRAAL0453 hypothetical protein; putative IMP dehydrogenase/GMP reductase domains K19123 casA; CRISPR system Cascade subunit CasA D FRAAL0454 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D FRAAL0455 hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC D FRAAL0456 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD D FRAAL0457 hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D FRAAL5582 Hypothetical protein; putative CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C FRAAL4994 Type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C FRAAL1375 Putative type I restriction enzyme (HsdR-like) (fragment) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C FRAAL1376 Putative type I restriction enzyme (hsdR-like) (fragment) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C FRAAL3318 hsdS; Type I restriction modification enzyme protein S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C FRAAL4993 Type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C FRAAL3317 hsdM; Type I restriction enzyme, M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C FRAAL4992 Restriction enzyme subunit M (methylation) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C FRAAL5425 Hypothetical protein; putative Type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D FRAAL0689 putative DNA Modification methylase (Cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C FRAAL3325 Conserved hypothetical protein; putative Restriction of methylated adenine protein K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D FRAAL5929 Hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D FRAAL1798 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE D FRAAL5060 hypothetical protein K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ C YoeB-YefM D FRAAL2443 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D FRAAL2444 conserved hypothetical protein K19159 yefM; antitoxin YefM C HipA-HipB D FRAAL0260 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D FRAAL2094 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA D FRAAL4988 hypothetical protein K07334 higB-1; toxin HigB-1 D FRAAL4987 Putative HTH-type transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D FRAAL0206 conserved hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-] D FRAAL4818 hypothetical protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D FRAAL2200 ftsZ; cell division protein,tubulin-like GTP-binding protein and GTPase, forms circumferential ring in cell division and participates in the septum formation (partial match) K03531 ftsZ; cell division protein FtsZ D FRAAL1916 mreB; Rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D FRAAL5260 gltX; Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C FRAAL5862 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C FRAAL6800 nifS; Cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C FRAAL5124 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins C FRAAL2645 hypothetical protein; putative IMP dehydrogenase / GMP reductase domain K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023