+E	Replication protein	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; DNA Replication Proteins - Haloplanus rubicundus CBA1112</h2>
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A<b>Eukaryotic type</b>
B  DNA Replication Initiation Factors
C    pre-RC (pre-replication complex)
C    CDK (cyclin dependent kinase)
C    DDK (Dbf-4 dependent kinase)
C    GINS complex
C    Other initiation factors
B  DNA Replication Elongation Factors
C    DNA polymerase alpha / primase complex
C    DNA polymerase epsilon complex
C    DNA polymerase delta complex
C    DNA polymerase gamma complex (mitochondrial)
C    RPA (replication protein A)
D      DU484_01460 single-stranded DNA binding protein	K07466 RFA1; replication factor A1 
C    RFC (replication factor C)
C    RNase H
D      DU484_08405 ribonuclease H	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
C    Other elongation factors
D      DU484_02175 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen 
D      DU484_00015 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen 
D      DU484_18610 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen 
D      DU484_11020 AAA family ATPase	K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] 
D      DU484_15950 fen; flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
D      DU484_13590 ATP-dependent DNA ligase	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
B  DNA Replication Termination Factors
C    DNA methylation enzymes
C    Prevention of re-replication factors
C    Telomere proteins
D      Shelterin complex
D      TERB1-TERB2-MAJIN complex
D      CST complex (animals)
D      CST complex (yeast)
D      RIF proteins
D      SIR proteins
C    Telomerase complex (animals)
D      Dyskerin complex
E        DU484_09380 RNA-protein complex protein Nop10	K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 
C    Telomerase complex (fungi)
D      Sm core complex
C    ELG1-RFC complex
C    MRN complex
C    Other termination factors
B  DNA Topoisomerases
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A<b>Prokaryotic type</b>
B  DNA Replication Initiation Factors
C    Initiation factors (bacterial)
D      DU484_18080 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta 
D      DU484_17025 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101] 
C    Initiation factors (archaeal)
D      DU484_02920 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6 
D      DU484_07455 NACHT domain-containing protein	K10725 cdc6A; archaeal cell division control protein 6 
D      DU484_02270 cdc6; cell division control protein 6	K10725 cdc6A; archaeal cell division control protein 6 
D      DU484_00615 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6 
D      DU484_18705 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6 
D      DU484_01750 hypothetical protein	K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] 
D      DU484_15680 DNA primase catalytic subunit PriS	K02683 priS; DNA primase small subunit [EC:2.7.7.102] 
D      DU484_01090 DNA primase	K18882 priL; DNA primase large subunit 
D      DU484_15675 hypothetical protein	K09723 ginS; DNA replication factor GINS 
B  DNA Replication Elongation Factors
C    Elongation factors (bacterial)
D      DNA polymerase III holoenzyme
D      RNase H
E        DU484_08405 ribonuclease H	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        DU484_04920 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      Other elongation factors
E        DU484_10105 NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
C    Elongation factors (archaeal)
D      B-family DNA polymerases
E        DU484_06995 hypothetical protein	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] 
D      D-family DNA polymerases
E        DU484_03145 polC; DNA polymerase II large subunit	K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] 
E        DU484_02910 DNA-directed DNA polymerase II small subunit	K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] 
D      RNase H
E        DU484_08405 ribonuclease H	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        DU484_04920 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      RFC (replication factor C)
E        DU484_16290 replication factor C large subunit	K04800 rfcL; replication factor C large subunit 
E        DU484_01905 hypothetical protein	K04801 rfcS; replication factor C small subunit 
E        DU484_01190 AAA family ATPase	K04801 rfcS; replication factor C small subunit 
D      Other elongation factors
E        DU484_11020 AAA family ATPase	K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] 
E        DU484_15950 fen; flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
E        DU484_13590 ATP-dependent DNA ligase	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
B  DNA Replication Termination Factors
C    Terminus site-binding protein
C    DNA methylation enzymes
C    Prevention of re-replication factors
B  DNA Topoisomerases
C    DU484_13555 DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] 
C    DU484_13560 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] 
C    DU484_13570 DNA topoisomerase IV subunit A	K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] 
C    DU484_13565 DNA topoisomerase VI subunit B	K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] 
C    DU484_03250 DUF91 domain-containing protein	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
C    DU484_06790 DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
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#Last updated: November 2, 2022