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Transcription Machinery - Lacticaseibacillus paracasei BL23
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
E LCABL_02830 srmB; Superfamily II DNA and RNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E LCABL_26450 rpoA; DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (Transcriptase subunit alpha) (RNA polymerase subunit alpha) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E LCABL_26820 rpoB; DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (Transcriptase subunit beta) (RNA polymerase subunit beta) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E LCABL_26800 rpoC; DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (Transcriptase subunit beta) (RNA polymerase subunit beta) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E LCABL_27400 rpoE; DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
E LCABL_18430 rpoZ; DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (Transcriptase subunit omega) (RNA polymerase omega subunit) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E LCABL_17240 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E LCABL_09250 comX; Competence-specific sigma factor ComX K27000 sigH; RNA polymerase sigma-H factor
E LCABL_03900 rpoN; Sigma 54 transcription factor K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E LCABL_17890 nusA; Transcription elongation protein NusA (Transcription termination-antitermination factor NusA) K02600 nusA; transcription termination/antitermination protein NusA
E LCABL_18560 nusB; N utilization substance protein B homolog (Protein nusB) K03625 nusB; transcription antitermination protein NusB
E LCABL_24720 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Transcription elongation factors
E LCABL_02110 greA; Transcription elongation factor K03624 greA; transcription elongation factor GreA
E LCABL_18860 greA; Transcription elongation factor GreA (Transcriptcleavage factor GreA) K03624 greA; transcription elongation factor GreA
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024