+D
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Transfer RNA Biogenesis - Lactobacillus gasseri ATCC 33323
%
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D LGAS_0874 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
D LGAS_0908 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D LGAS_0808 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LGAS_1196 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LGAS_0459 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LGAS_0205 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LGAS_0466 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LGAS_0280 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LGAS_0860 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D LGAS_0421 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LGAS_1028 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LGAS_1415 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LGAS_1621 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LGAS_0338 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LGAS_1219 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LGAS_0859 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LGAS_1392 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LGAS_1391 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LGAS_0177 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LGAS_0201 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D LGAS_0858 D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
D LGAS_1444 Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
D LGAS_1441 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
C Psudouridine synthases
D LGAS_0321 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LGAS_0816 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D LGAS_1191 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LGAS_1224 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D LGAS_1246 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LGAS_1380 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LGAS_1895 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LGAS_1894 tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
D LGAS_1897 RNase P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LGAS_r1021 RNA_RNaseP_classB K01978 rnpB; M1 RNA
B 3'processing and CCA adding factors
C 3'processing factors
D LGAS_0874 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
D LGAS_0908 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D LGAS_0459 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LGAS_0808 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D LGAS_0177 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LGAS_0201 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LGAS_1415 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LGAS_1196 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LGAS_0280 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LGAS_0421 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LGAS_1219 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LGAS_0205 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LGAS_1621 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LGAS_0860 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LGAS_1116 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LGAS_1115 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LGAS_0338 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LGAS_0466 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LGAS_1392 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LGAS_1391 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LGAS_0859 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LGAS_1028 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LGAS_0337 glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
C Trans-editing factors
D LGAS_0858 D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LGAS_0854 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
D LGAS_0367 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D LGAS_0279 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
C Methylthiotransferases
C Methyltransferases
D LGAS_0917 tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D LGAS_1441 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LGAS_0788 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LGAS_1895 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LGAS_1111 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D LGAS_1346 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LGAS_1394 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D LGAS_0321 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LGAS_0816 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D LGAS_1189 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LGAS_1191 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LGAS_1224 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Other tRNA modification factors
D LGAS_1894 tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LGAS_1380 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LGAS_1223 Thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D LGAS_0275 tRNA(Ile)-lysidine synthetase, MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LGAS_0379 Metal-dependent protease-like protein, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LGAS_1246 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LGAS_0381 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LGAS_1295 Predicted ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LGAS_1400 Predicted nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
B tRNA degradation factors
C LGAS_1303 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024