+D
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Transfer RNA Biogenesis - Limosilactobacillus reuteri subsp. reuteri JCM 1112
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D LAR_0636 metal-dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
D LAR_0737 polyA polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D LAR_0666 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LAR_0578 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LAR_1228 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LAR_0201 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LAR_1204 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LAR_0260 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LAR_0695 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D LAR_0519 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LAR_1768 asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LAR_1745 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LAR_0091 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LAR_0291 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LAR_0490 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LAR_1731 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LAR_1715 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LAR_1151 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LAR_1150 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LAR_0142 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LAR_0194 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D LAR_0693 conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
D LAR_1197 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
D LAR_1194 putative methyl transferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
C Psudouridine synthases
D LAR_1363 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LAR_0674 pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D LAR_0444 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LAR_1136 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LAR_1816 thiophene and furan oxidation protein ThdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LAR_1815 cell division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
D LAR_1819 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D LAR_0636 metal-dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
D LAR_0737 polyA polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D LAR_1228 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LAR_0666 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D LAR_0142 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LAR_0194 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LAR_1745 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LAR_0578 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LAR_0260 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LAR_0519 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LAR_0490 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LAR_0201 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LAR_0091 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LAR_0695 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LAR_0711 glycyl-tRNA synthase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LAR_0712 glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LAR_0291 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LAR_1204 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LAR_1151 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LAR_1150 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LAR_1731 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LAR_1715 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LAR_1768 asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LAR_1134 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
C Trans-editing factors
D LAR_0693 conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LAR_1576 putative transcription regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D LAR_0344 putative DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D LAR_1799 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
D LAR_0314 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D LAR_0259 transcription regulator K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
C Methylthiotransferases
C Methyltransferases
D LAR_1194 putative methyl transferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LAR_1084 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LAR_1816 thiophene and furan oxidation protein ThdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LAR_0717 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D LAR_0564 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LAR_1154 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D LAR_1363 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LAR_0674 pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D LAR_0585 tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Other tRNA modification factors
D LAR_1815 cell division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LAR_1136 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LAR_0515 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LAR_0489 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D LAR_0255 cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LAR_0330 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LAR_0444 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LAR_0332 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LAR_0394 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LAR_1164 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
B tRNA degradation factors
C LAR_0389 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024