+E Transcription factors KO
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Transcription Factors - Mycobacterium dioxanotrophicus
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D BTO20_06725 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BTO20_06750 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BTO20_11305 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D BTO20_02520 hypothetical protein K07506 K07506; AraC family transcriptional regulator
D BTO20_09925 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
C LysR family
D BTO20_33400 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D BTO20_35665 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D BTO20_01980 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
C DeoR family
D BTO20_35760 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D BTO20_04440 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D BTO20_32300 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BTO20_32515 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BTO20_19115 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BTO20_33215 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BTO20_24430 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BTO20_11860 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D BTO20_27020 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D BTO20_18825 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_31655 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D BTO20_20165 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_02665 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_32080 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_34995 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_35060 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_03510 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D BTO20_29420 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BTO20_34535 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BTO20_36485 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BTO20_08540 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BTO20_02410 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BTO20_02555 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BTO20_27605 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BTO20_00325 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BTO20_17430 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D BTO20_02790 hypothetical protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D BTO20_17955 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D BTO20_33375 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D BTO20_01385 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D BTO20_19100 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BTO20_25825 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BTO20_13755 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BTO20_03465 TetR family transcriptional regulator K18937 lfrR; TetR/AcrR family transcriptional regulator, repressor for lfrA
D BTO20_02025 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D BTO20_11975 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D BTO20_14145 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D BTO20_18360 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D BTO20_04355 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D BTO20_03725 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D BTO20_36690 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D BTO20_04460 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D BTO20_04605 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D BTO20_18285 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D BTO20_28605 mycofactocin system transcriptional regulator K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system
D BTO20_27320 TetR family transcriptional regulator K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase
D BTO20_33650 hypothetical protein K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D BTO20_26990 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BTO20_25245 hypothetical protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BTO20_26555 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BTO20_00375 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D BTO20_29555 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D BTO20_28430 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D BTO20_28095 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D BTO20_33425 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BTO20_34250 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D BTO20_22485 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D BTO20_07490 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D BTO20_32460 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D BTO20_26610 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D BTO20_33725 MerR family DNA-binding transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D BTO20_02040 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
C Fur family
D BTO20_12455 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BTO20_03080 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D BTO20_07445 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D BTO20_32395 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D BTO20_29795 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D BTO20_02390 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D BTO20_37185 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D BTO20_17405 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
C CRP/FNR family
D BTO20_33370 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BTO20_03635 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
D BTO20_07070 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D BTO20_24070 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D BTO20_20550 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D BTO20_20540 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D BTO20_20585 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D BTO20_17245 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D BTO20_01040 transcriptional regulator K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
D BTO20_22605 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D BTO20_12460 transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
D BTO20_11155 Cro/Cl family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D BTO20_04875 Cro/Cl family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D BTO20_22155 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
C Other families
D BTO20_21900 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D BTO20_22435 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D BTO20_15545 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BTO20_26110 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BTO20_29710 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D BTO20_28255 hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BTO20_38205 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BTO20_29790 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BTO20_07905 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D BTO20_02095 transcriptional regulator K27097 espR; ESX-1-secreted protein regulator
D BTO20_19945 XRE family transcriptional regulator K27097 espR; ESX-1-secreted protein regulator
D BTO20_38870 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator
D BTO20_05770 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D BTO20_25585 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_21520 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_26025 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_36030 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_27465 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_03610 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_00580 transcription factor WhiB K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_35910 transcription factor WhiB K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_25330 transcription factor WhiB K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BTO20_35255 CopY family transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BTO20_26775 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BTO20_06260 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BTO20_23115 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BTO20_27755 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BTO20_32560 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BTO20_00075 regulator K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D BTO20_07955 regulator K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D BTO20_00665 peptide transporter K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BTO20_37970 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BTO20_38840 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BTO20_00045 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BTO20_04230 RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BTO20_14555 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D BTO20_12385 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D BTO20_16440 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D BTO20_07270 PaaX domain-containing protein, C-domain protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D BTO20_18785 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D BTO20_16700 transcriptional regulator K07734 paiB; transcriptional regulator
D BTO20_00140 hypothetical protein K07735 algH; putative transcriptional regulator
D BTO20_21940 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D BTO20_13580 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0