+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Manihot esculenta (cassava)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        110599719 mRNA cap guanine-N7 methyltransferase 1	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        110624004 mRNA cap guanine-N7 methyltransferase 2 isoform X1	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        110620874 mRNA-capping enzyme isoform X1	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        110622631 mRNA-capping enzyme isoform X1	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        110617698 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
D      Cap binding complex
E        110617234 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        110630464 nuclear cap-binding protein subunit 2 isoform X1	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        110600052 pre-mRNA cleavage factor Im 25 kDa subunit 2	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        110610374 pre-mRNA cleavage factor Im 25 kDa subunit 1	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        110629596 cleavage and polyadenylation specificity factor subunit 6	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
E        110611227 cleavage and polyadenylation specificity factor subunit 6 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        110605501 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        110621360 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        110605686 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        110617284 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        110600371 cleavage and polyadenylation specificity factor subunit 2 isoform X1	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        110624826 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        110619264 uncharacterized protein LOC110619264	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        110599674 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        110611362 FIP1[V]-like protein isoform X1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        110613676 flowering time control protein FY isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        110626340 flowering time control protein FY isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        110604142 protein ANTHESIS POMOTING FACTOR 1	K14962 WDR82; COMPASS component SWD2 
E        110604537 protein ANTHESIS POMOTING FACTOR 1 isoform X1	K14962 WDR82; COMPASS component SWD2 
E        110600799 serine/threonine-protein phosphatase PP1 isozyme 3 isoform X2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110624486 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110622242 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110620417 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110620842 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110619397 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110609324 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110620019 serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110621962 serine/threonine-protein phosphatase PP1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110604709 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110622891 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110618777 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110600061 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X3	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        110617650 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        110599595 cleavage stimulation factor subunit 50 isoform X1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        110608484 cleavage stimulating factor 64	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        110599745 cleavage stimulation factor subunit 77 isoform X1	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        110622332 uncharacterized protein LOC110622332 isoform X1	K06100 SYMPK; symplekin 
E        110606635 uncharacterized protein LOC110606635 isoform X1	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        110617723 small nuclear ribonucleoprotein-associated protein B'	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        110614794 small nuclear ribonucleoprotein SmD3b	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        110605768 small nuclear ribonucleoprotein SmD3b isoform X1	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        110614649 small nuclear ribonucleoprotein SmD3b	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        110616167 small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        110618073 small nuclear ribonucleoprotein E isoform X1	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        110600915 probable small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        110607095 probable small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        110622096 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        110600371 cleavage and polyadenylation specificity factor subunit 2 isoform X1	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        110624826 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        110608484 cleavage stimulating factor 64	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        110622332 uncharacterized protein LOC110622332 isoform X1	K06100 SYMPK; symplekin 
E        110606635 uncharacterized protein LOC110606635 isoform X1	K06100 SYMPK; symplekin 
D      DRB sensitivity inducing factor (DSIF) complex
E        110621236 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        110606391 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        110609215 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        110609534 N6-adenosine-methyltransferase MT-A70-like isoform X1	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        110599885 N6-adenosine-methyltransferase non-catalytic subunit MTB isoform X1	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        110607518 RNA N6-adenosine-methyltransferase mettl16 isoform X2	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        110631227 FKBP12-interacting protein of 37 kDa	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        110616841 uncharacterized protein LOC110616841	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        110630678 uncharacterized protein LOC110630678	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        110621213 E3 ubiquitin-protein ligase HAKAI homolog	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        110612804 nuclear poly(A) polymerase 4	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        110616008 nuclear poly(A) polymerase 1 isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        110624527 nuclear poly(A) polymerase 1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        110627149 nuclear poly(A) polymerase 4 isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        110612098 nuclear poly(A) polymerase 3	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        110628392 BRCA1-associated RING domain protein 1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        110630408 BRCA1-associated RING domain protein 1 isoform X2	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        110604583 protein BREAST CANCER SUSCEPTIBILITY 1 homolog	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        110605138 zinc finger CCCH domain-containing protein 41	K13192 RBM26; RNA-binding protein 26 
E        110601572 zinc finger CCCH domain-containing protein 41	K13192 RBM26; RNA-binding protein 26 
E        110618397 RNA demethylase ALKBH9B isoform X1	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        110611946 RNA demethylase ALKBH10B	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        110609312 RNA demethylase ALKBH9B	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        110615658 RNA demethylase ALKBH10B	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        110601885 RNA demethylase ALKBH9B	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
C    Other processing factors
D      110619826 KIN17-like protein	K13102 KIN; DNA/RNA-binding protein KIN17 
D      110627169 methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      110607434 serrate RNA effector molecule isoform X1	K27103 SRRT; serrate RNA effector molecule 
D      110626331 serrate RNA effector molecule isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        110617994 RNA-binding protein Y14	K12876 RBM8A; RNA-binding protein 8A 
E        110600456 RNA-binding protein Y14	K12876 RBM8A; RNA-binding protein 8A 
E        110615984 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        110599827 THO complex subunit 4D isoform X1	K12881 THOC4; THO complex subunit 4 
E        110613754 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        110618864 THO complex subunit 4B isoform X1	K12881 THOC4; THO complex subunit 4 
E        110626418 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        110609130 THO complex subunit 4D isoform X1	K12881 THOC4; THO complex subunit 4 
E        110625452 DEAD-box ATP-dependent RNA helicase 15 isoform X1	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        110611373 DEAD-box ATP-dependent RNA helicase 15	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        110603963 DEAD-box ATP-dependent RNA helicase 15	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        110613917 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        110626770 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        110614904 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        110618573 histone deacetylase complex subunit SAP18 isoform X1	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        110625029 pinin	K13114 PNN; pinin 
E        110629388 apoptotic chromatin condensation inducer in the nucleus	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        110630280 apoptotic chromatin condensation inducer in the nucleus	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        110619087 serine/arginine-rich splicing factor SR45	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        110602038 RNA-binding protein CP29B, chloroplastic	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        110600064 serine/arginine-rich splicing factor SR45 isoform X1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        110617766 serine/arginine-rich splicing factor SR45 isoform X1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        110620314 serine/arginine repetitive matrix protein 1 isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        110613578 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        110605196 THO complex subunit 2 isoform X2	K12879 THOC2; THO complex subunit 2 
E        110613986 THO complex subunit 3 isoform X2	K12880 THOC3; THO complex subunit 3 
E        110599827 THO complex subunit 4D isoform X1	K12881 THOC4; THO complex subunit 4 
E        110613754 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        110618864 THO complex subunit 4B isoform X1	K12881 THOC4; THO complex subunit 4 
E        110626418 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        110609130 THO complex subunit 4D isoform X1	K12881 THOC4; THO complex subunit 4 
E        110607171 THO complex subunit 5B isoform X1	K13174 THOC5; THO complex subunit 5 
E        110621305 THO complex subunit 7A	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        110603395 enhanced ethylene response protein 5 isoform X1	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        110630862 protein DELETION OF SUV3 SUPPRESSOR 1(I)	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        110616555 protein DELETION OF SUV3 SUPPRESSOR 1(I)	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        110627849 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        110601540 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        110611040 SAC3 family protein B isoform X1	K23719 SAC3; nuclear mRNA export protein SAC3 
E        110626617 SAC3 family protein C	K23719 SAC3; nuclear mRNA export protein SAC3 
D      Nuclear pore complex
E        110603690 nuclear-pore anchor	K09291 TPR; nucleoprotein TPR 
E        110612832 protein RAE1	K14298 RAE1; mRNA export factor 
E        110615800 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        110611690 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        110616949 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        110603901 nuclear pore complex protein NUP85 isoform X1	K14304 NUP85; nuclear pore complex protein Nup85 
E        110630774 nuclear pore complex protein NUP43	K14305 NUP43; nuclear pore complex protein Nup43 
E        110609422 nucleoporin NUP152 isoform X1	K14295 NUP50; nuclear pore complex protein Nup50 
E        110617386 uncharacterized protein LOC110617386 isoform X1	K14295 NUP50; nuclear pore complex protein Nup50 
E        110629360 nuclear pore complex protein NUP54	K14308 NUP54; nuclear pore complex protein Nup54 
E        110615145 nuclear pore complex protein NUP62 isoform X1	K14306 NUP62; nuclear pore complex protein Nup62 
E        110624938 nuclear pore complex protein NUP88	K14318 NUP88; nuclear pore complex protein Nup88 
E        110625571 nuclear pore complex protein NUP93A	K14309 NUP93; nuclear pore complex protein Nup93 
E        110613817 nuclear pore complex protein NUP96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        110624105 nuclear pore complex protein NUP98A isoform X1	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        110626255 nuclear pore complex protein NUP107 isoform X1	K14301 NUP107; nuclear pore complex protein Nup107 
E        110627722 nuclear pore complex protein NUP133 isoform X1	K14300 NUP133; nuclear pore complex protein Nup133 
E        110613074 uncharacterized protein LOC110613074 isoform X1	K14311 NUP188; nuclear pore complex protein Nup188 
E        110604541 nuclear pore complex protein NUP155 isoform X1	K14312 NUP155; nuclear pore complex protein Nup155 
E        110600866 nuclear pore complex protein NUP160 isoform X1	K14303 NUP160; nuclear pore complex protein Nup160 
E        110612841 nuclear pore complex protein NUP35	K14313 NUP35; nuclear pore complex protein Nup53 
E        110625789 nuclear pore complex protein NUP35	K14313 NUP35; nuclear pore complex protein Nup53 
E        110615646 nuclear pore complex protein NUP205 isoform X1	K14310 NUP205; nuclear pore complex protein Nup205 
E        110605204 nuclear pore complex protein GP210 isoform X2	K14314 NUP210; nuclear pore complex protein Nup210 
E        110601863 nuclear pore complex protein NUP214	K14317 NUP214; nuclear pore complex protein Nup214 
E        110630166 nuclear pore complex protein NUP58	K14307 NUPL1; nucleoporin p58/p45 
E        110609358 zinc finger CCCH domain-containing protein 46 isoform X1	K14321 NUPL2; nucleoporin-like protein 2 
E        110621193 uncharacterized protein LOC110621193	K14315 NDC1; nucleoporin NDC1 
E        110601251 uncharacterized protein LOC110601251	K14315 NDC1; nucleoporin NDC1 
E        110610188 protein SEH1	K14299 SEH1; nucleoporin SEH1 
E        110624975 aladin isoform X1	K14320 AAAS; aladin 
E        110629785 protein GLE1	K18723 GLE1; nucleoporin GLE1 
D      Ran-mediated transport factors
E        110603316 GTP-binding nuclear protein Ran-3	K07936 RAN; GTP-binding nuclear protein Ran 
E        110618082 GTP-binding nuclear protein Ran-3 isoform X1	K07936 RAN; GTP-binding nuclear protein Ran 
E        110600241 GTP-binding nuclear protein Ran-3	K07936 RAN; GTP-binding nuclear protein Ran 
E        122722127 GTP-binding nuclear protein Ran-3	K07936 RAN; GTP-binding nuclear protein Ran 
E        110607487 plant UBX domain-containing protein 10	K18726 FAF2; FAS-associated factor 2 
E        110608608 plant UBX domain-containing protein 10	K18726 FAF2; FAS-associated factor 2 
E        110616943 plant UBX domain-containing protein 10	K18726 FAF2; FAS-associated factor 2 
E        110620691 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        110613480 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        110616858 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        110626280 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        110622765 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        110613059 protein N-lysine methyltransferase METTL21A	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        110627685 uncharacterized protein LOC110627685	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        110623806 protein EXPORTIN 1A isoform X1	K14290 XPO1; exportin-1 
E        110621778 protein EXPORTIN 1A isoform X1	K14290 XPO1; exportin-1 
E        110612706 exportin-7 isoform X1	K18460 XPO7; exportin-7 
E        110626572 exportin-7 isoform X1	K18460 XPO7; exportin-7 
E        110611756 RAN GTPase-activating protein 1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        110610650 RAN GTPase-activating protein 2	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        110602213 RAN GTPase-activating protein 2 isoform X1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        110615684 RAN GTPase-activating protein 1	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        110610766 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        110602186 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        110620921 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        110622140 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        110604592 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        110626612 eukaryotic initiation factor 4A-8	K03257 EIF4A; translation initiation factor 4A 
E        110603503 eukaryotic initiation factor 4A-14	K03257 EIF4A; translation initiation factor 4A 
E        110611033 uncharacterized protein LOC110611033	K03257 EIF4A; translation initiation factor 4A 
E        110613476 eukaryotic initiation factor 4A-14	K03257 EIF4A; translation initiation factor 4A 
E        110616980 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        110616742 eukaryotic translation initiation factor 4G isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        110615184 eukaryotic translation initiation factor 4G	K03260 EIF4G; translation initiation factor 4G 
E        110631150 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        110623323 protein PIR isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        110600946 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110620830 DEAD-box ATP-dependent RNA helicase 37 isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110631148 DEAD-box ATP-dependent RNA helicase 52B isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110622881 DEAD-box ATP-dependent RNA helicase 11 isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110628555 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        110612986 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        110629964 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X4	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        110621211 polyadenylate-binding protein 7	K13126 PABPC; polyadenylate-binding protein 
E        110628146 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        110619158 polyadenylate-binding protein 8	K13126 PABPC; polyadenylate-binding protein 
E        110629828 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        110613098 polyadenylate-binding protein 4-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        110624205 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        110626390 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        110625047 30S ribosomal protein 2, chloroplastic	K13126 PABPC; polyadenylate-binding protein 
E        110609284 polyadenylate-binding protein 3 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        110617278 DExH-box ATP-dependent RNA helicase DExH11 isoform X1	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        110621112 malignant T-cell-amplified sequence 1 homolog	K07575 MCTS; malignant T-cell-amplified sequence 
E        110610359 translation machinery-associated protein 22	K24272 DENR; density-regulated protein 
E        110604085 translation machinery-associated protein 22	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        110624403 partner of Y14 and mago	K14294 WIBG; partner of Y14 and mago 
E        110619680 partner of Y14 and mago isoform X1	K14294 WIBG; partner of Y14 and mago 
E        110604019 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110605126 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110618022 glycine-rich RNA-binding protein 2, mitochondrial isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110622341 UBP1-associated protein 2A	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110630977 glycine-rich RNA-binding protein 3, mitochondrial	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110602286 heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110602303 heterogeneous nuclear ribonucleoprotein 1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110624044 UBP1-associated protein 2A	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110626174 heterogeneous nuclear ribonucleoprotein 1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110622836 UBP1-associated protein 2B	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110623886 UBP1-associated protein 2A	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110612039 heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110620933 UBP1-associated protein 2B	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110620663 UBP1-associated protein 2B	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110610949 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110623363 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110629921 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110623456 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110629892 RNA-binding protein Musashi homolog 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        110602248 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110608293 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110628080 RNA-binding protein Musashi homolog 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        110621109 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110607075 RNA-binding protein 1	K14411 MSI; RNA-binding protein Musashi 
E        110601325 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        110611818 HBS1-like protein isoform X1	K14416 HBS1; elongation factor 1 alpha-like protein 
E        110621351 protein PELOTA 1	K06965 PELO; protein pelota 
E        122721271 uncharacterized protein LOC122721271 isoform X1	K06965 PELO; protein pelota 
E        122721556 uncharacterized protein LOC122721556 isoform X1	K06965 PELO; protein pelota 
E        110607751 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        110630669 polyadenylate-binding protein 1 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        110618149 polyadenylate-binding protein 1 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        110618872 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        110628145 polyadenylate-binding protein 2	K14396 PABPN1; polyadenylate-binding protein 2 
E        110630177 polyadenylate-binding protein 3	K14396 PABPN1; polyadenylate-binding protein 2 
E        110607726 DEAD-box ATP-dependent RNA helicase 38	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        110621117 DEAD-box ATP-dependent RNA helicase 38	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        110603647 pre-mRNA-splicing factor SYF1	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        110621023 protein MODIFIER OF SNC1 11 isoform X1	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        110622726 protein MODIFIER OF SNC1 11 isoform X1	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        110601929 transcription factor Pur-alpha 1	K21772 PURA; transcriptional activator protein Pur-alpha 
E        110619864 SAC3 family protein A isoform X1	K23802 LENG8; SAC3 family protein LENG8/THP3 
E        110624713 SAC3 family protein A isoform X1	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        110620352 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        110613454 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        110625931 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        110599846 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1	K03267 ERF3; peptide chain release factor subunit 3 
E        110617494 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1	K03267 ERF3; peptide chain release factor subunit 3 
E        110604816 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        110618587 regulator of nonsense transcripts UPF2	K14327 UPF2; regulator of nonsense transcripts 2 
E        110619245 regulator of nonsense transcripts UPF3 isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        110624935 regulator of nonsense transcripts UPF3 isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        110601864 serine/threonine-protein phosphatase PP2A-2 catalytic subunit isoform X1	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110615806 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110631242 serine/threonine-protein phosphatase PP2A-2 catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110609072 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110620031 serine/threonine-protein phosphatase PP2A-4 catalytic subunit isoform X1	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110622849 serine/threonine-protein phosphatase PP2A-4 catalytic subunit isoform X1	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110611412 serine/threonine-protein phosphatase PP2A-2 catalytic subunit isoform X1	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        110624490 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        110599796 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        110618206 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        110614578 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        110613555 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        110626413 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        110611712 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        110602210 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        110629553 serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        110611345 serine/threonine protein phosphatase 2A regulatory subunit B''beta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        110622700 serine/threonine protein phosphatase 2A regulatory subunit B''beta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        110621654 probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        110625510 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110629018 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110630356 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110603800 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110603815 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110604558 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110623170 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110621794 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110628215 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110628240 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110612378 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        110628113 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        110601200 uncharacterized protein LOC110601200	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        110629567 protein SMG7	K14409 SMG7; protein SMG7 
E        110609789 protein SMG7	K14409 SMG7; protein SMG7 
E        110612856 uncharacterized protein LOC110612856 isoform X1	K18734 SMG8; protein SMG8 
E        110622019 protein SMG9 isoform X1	K18735 SMG9; protein SMG9 
E        110628555 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        110612986 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        110629964 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X4	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
C    Factors involved in mRNA localization
D      Cargo complex
E        110612411 pumilio homolog 24	K14844 PUF6; pumilio homology domain family member 6 
E        110603406 myosin-15 isoform X1	K10357 MYO5; myosin V 
E        110621218 LOW QUALITY PROTEIN: myosin-12-like	K10357 MYO5; myosin V 
E        110628127 myosin-6 isoform X1	K10357 MYO5; myosin V 
E        110601297 myosin-6	K10357 MYO5; myosin V 
E        110622694 myosin-9 isoform X1	K10357 MYO5; myosin V 
E        110629853 myosin-6	K10357 MYO5; myosin V 
E        110610506 myosin-2 isoform X1	K10357 MYO5; myosin V 
E        110601524 myosin-2	K10357 MYO5; myosin V 
E        110610277 myosin-6 isoform X1	K10357 MYO5; myosin V 
E        110612307 myosin-17 isoform X1	K10357 MYO5; myosin V 
E        110621947 myosin-9	K10357 MYO5; myosin V 
E        110602813 myosin-17	K10357 MYO5; myosin V 
E        110608954 myosin-17-like	K10357 MYO5; myosin V 
E        110603277 uncharacterized protein LOC110603277 isoform X1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        110610518 piRNA biogenesis protein EXD1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
D      Trans-acting binding proteins
E        110605351 far upstream element-binding protein 1	K13210 FUBP; far upstream element-binding protein 
E        110600750 far upstream element-binding protein 2	K13210 FUBP; far upstream element-binding protein 
E        110609063 far upstream element-binding protein 2 isoform X3	K13210 FUBP; far upstream element-binding protein 
E        110603884 far upstream element-binding protein 1	K13210 FUBP; far upstream element-binding protein 
E        110603728 far upstream element-binding protein 1	K13210 FUBP; far upstream element-binding protein 
E        110602060 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        110611427 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        110611428 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        110611272 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        110623883 elongation factor 1-gamma	K03233 EEF1G; elongation factor 1-gamma 
E        110619637 elongation factor 1-gamma isoform X1	K03233 EEF1G; elongation factor 1-gamma 
E        110622717 probable ADP-ribosylation factor GTPase-activating protein AGD14	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        110620893 probable ADP-ribosylation factor GTPase-activating protein AGD14	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
D      Other mRNA localization factors
E        110623323 protein PIR isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        110623371 flowering locus K homology domain	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110625389 RNA-binding KH domain-containing protein RCF3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110615932 RNA-binding KH domain-containing protein RCF3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110610615 flowering locus K homology domain isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110629871 KH domain-containing protein HEN4 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110603342 RNA-binding KH domain-containing protein RCF3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110600702 KH domain-containing protein At4g18375 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110617663 RNA-binding KH domain-containing protein PEPPER isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110625091 KH domain-containing protein HEN4 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110620748 flowering locus K homology domain	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110615568 RNA-binding KH domain-containing protein RCF3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110616663 poly(rC)-binding protein 4	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110604629 KH domain-containing protein At4g18375 isoform X2	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        110612264 RNA-binding KH domain-containing protein PEPPER	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        110630996 protein argonaute PNH1 isoform X3	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110613720 protein argonaute 5	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110625503 protein argonaute 5	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110601956 protein argonaute 10	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110612004 protein argonaute 10	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110606518 protein argonaute 4 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110611838 protein argonaute 2 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110609091 protein argonaute 4	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110618594 protein argonaute 2	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110631348 protein argonaute 7	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110616318 protein argonaute 7	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110629391 protein argonaute 16 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110609280 protein argonaute 1 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        110610766 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        110602186 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        110620921 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        110622140 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        110604592 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        110604816 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        110600946 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110620830 DEAD-box ATP-dependent RNA helicase 37 isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110631148 DEAD-box ATP-dependent RNA helicase 52B isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110622881 DEAD-box ATP-dependent RNA helicase 11 isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        110615933 DEAD-box ATP-dependent RNA helicase 8 isoform X1	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        110615673 DEAD-box ATP-dependent RNA helicase 8 isoform X1	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        110617338 protein decapping 5 isoform X1	K18749 LSM14; protein LSM14 
E        110599630 protein decapping 5	K18749 LSM14; protein LSM14 
E        110619127 probable RNA helicase SDE3	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        110619208 probable RNA helicase SDE3 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        110611481 probable RNA helicase SDE3 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        122724057 probable RNA helicase SDE3 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        110626322 transportin-1 isoform X1	K18752 TNPO1; transportin-1 
E        110615717 transportin-1 isoform X1	K18752 TNPO1; transportin-1 
E        110601200 uncharacterized protein LOC110601200	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        110629567 protein SMG7	K14409 SMG7; protein SMG7 
E        110609789 protein SMG7	K14409 SMG7; protein SMG7 
E        110623223 zinc finger CCCH domain-containing protein 14 isoform X1	K18753 ZFP36L; butyrate response factor 
E        110608756 zinc finger CCCH domain-containing protein 14	K18753 ZFP36L; butyrate response factor 
E        110631331 zinc finger CCCH domain-containing protein 15	K18753 ZFP36L; butyrate response factor 
E        110604019 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110605126 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110618022 glycine-rich RNA-binding protein 2, mitochondrial isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110622341 UBP1-associated protein 2A	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110630977 glycine-rich RNA-binding protein 3, mitochondrial	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110602286 heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110602303 heterogeneous nuclear ribonucleoprotein 1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110624044 UBP1-associated protein 2A	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110626174 heterogeneous nuclear ribonucleoprotein 1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110622836 UBP1-associated protein 2B	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110623886 UBP1-associated protein 2A	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110612039 heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110620933 UBP1-associated protein 2B	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110620663 UBP1-associated protein 2B	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        110614599 la-related protein 1A isoform X1	K18757 LARP1; la-related protein 1 
E        110606697 la-related protein 1C	K18757 LARP1; la-related protein 1 
E        110615716 uncharacterized protein LOC110615716	K18757 LARP1; la-related protein 1 
E        110606855 la-related protein 1C isoform X1	K18757 LARP1; la-related protein 1 
E        110622764 la-related protein 1B	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        110619374 mRNA-decapping enzyme subunit 2	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        110626479 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        110622925 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        110619935 mRNA-decapping enzyme-like protein isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        110614034 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        110626836 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        110615018 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        110611921 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        110606038 sm-like protein LSM3B	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        110606771 sm-like protein LSM3B isoform X2	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        110623449 sm-like protein LSM4 isoform X2	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        110619353 sm-like protein LSM4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        110614427 sm-like protein LSM4 isoform X1	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        110627735 sm-like protein LSM5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        110629334 sm-like protein LSM5 isoform X2	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        110607326 sm-like protein LSM36B	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        110628259 sm-like protein LSM36B	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        110624077 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        110624079 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        110607742 sm-like protein LSM8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        110618655 sm-like protein LSM8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        110603406 myosin-15 isoform X1	K10357 MYO5; myosin V 
E        110621218 LOW QUALITY PROTEIN: myosin-12-like	K10357 MYO5; myosin V 
E        110628127 myosin-6 isoform X1	K10357 MYO5; myosin V 
E        110601297 myosin-6	K10357 MYO5; myosin V 
E        110622694 myosin-9 isoform X1	K10357 MYO5; myosin V 
E        110629853 myosin-6	K10357 MYO5; myosin V 
E        110610506 myosin-2 isoform X1	K10357 MYO5; myosin V 
E        110601524 myosin-2	K10357 MYO5; myosin V 
E        110610277 myosin-6 isoform X1	K10357 MYO5; myosin V 
E        110612307 myosin-17 isoform X1	K10357 MYO5; myosin V 
E        110621947 myosin-9	K10357 MYO5; myosin V 
E        110602813 myosin-17	K10357 MYO5; myosin V 
E        110608954 myosin-17-like	K10357 MYO5; myosin V 
E        110624851 tubulin alpha-2 chain	K07374 TUBA; tubulin alpha 
E        110619444 tubulin alpha-2 chain	K07374 TUBA; tubulin alpha 
E        110611764 tubulin alpha-5 chain	K07374 TUBA; tubulin alpha 
E        110601703 tubulin alpha-5 chain	K07374 TUBA; tubulin alpha 
E        110624233 tubulin alpha-2 chain	K07374 TUBA; tubulin alpha 
E        110630552 LOW QUALITY PROTEIN: tubulin alpha-2 chain-like	K07374 TUBA; tubulin alpha 
E        110622915 tubulin alpha-5 chain	K07374 TUBA; tubulin alpha 
E        110615750 CCR4-NOT transcription complex subunit 1-like isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        110616493 CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        110613778 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        110626409 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        110620847 general negative regulator of transcription subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        110622632 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        110612741 uncharacterized protein LOC110612741 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        110622649 uncharacterized protein LOC110622649 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        110625930 general negative regulator of transcription subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        110620823 carbon catabolite repressor protein 4 homolog 1 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        110602555 carbon catabolite repressor protein 4 homolog 4	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        110622721 carbon catabolite repressor protein 4 homolog 1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        110625448 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110604254 probable CCR4-associated factor 1 homolog 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110613701 probable CCR4-associated factor 1 homolog 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110626371 probable CCR4-associated factor 1 homolog 7 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110622893 probable CCR4-associated factor 1 homolog 11 isoform X2	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110601349 putative CCR4-associated factor 1 homolog 8	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110616564 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110606819 DIS3-like exonuclease 2 isoform X1	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        110631027 protein PAT1 homolog	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        110620061 protein PAT1 homolog 2 isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        110616567 protein PAT1 homolog isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        110624192 enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        110622782 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        110620876 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        110618587 regulator of nonsense transcripts UPF2	K14327 UPF2; regulator of nonsense transcripts 2 
E        110619245 regulator of nonsense transcripts UPF3 isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        110624935 regulator of nonsense transcripts UPF3 isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        110605881 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        110601800 YTH domain-containing protein ECT3 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        110629661 YTH domain-containing protein ECT1 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        110619291 YTH domain-containing protein ECT1 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        110631009 YTH domain-containing protein ECT4 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        110603860 YTH domain-containing protein ECT1 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        110628107 YTH domain-containing protein ECT2 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        110609373 YTH domain-containing protein ECT1 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        110613656 oligouridylate-binding protein 1B	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        110611873 RNA-binding protein 208 isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        110603893 oligouridylate-binding protein 1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        110626357 oligouridylate-binding protein 1B	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        110621211 polyadenylate-binding protein 7	K13126 PABPC; polyadenylate-binding protein 
E        110628146 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        110619158 polyadenylate-binding protein 8	K13126 PABPC; polyadenylate-binding protein 
E        110629828 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        110613098 polyadenylate-binding protein 4-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        110624205 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        110626390 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        110625047 30S ribosomal protein 2, chloroplastic	K13126 PABPC; polyadenylate-binding protein 
E        110609284 polyadenylate-binding protein 3 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        110617484 nuclear transport factor 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110615855 nuclear transport factor 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110630257 nuclear transport factor 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110600217 nuclear transport factor 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110609010 nuclear transport factor 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110626444 nuclear transport factor 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110629868 nuclear transport factor 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110628236 nuclear transport factor 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        110613655 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        110603637 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        110611343 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        110626612 eukaryotic initiation factor 4A-8	K03257 EIF4A; translation initiation factor 4A 
E        110603503 eukaryotic initiation factor 4A-14	K03257 EIF4A; translation initiation factor 4A 
E        110611033 uncharacterized protein LOC110611033	K03257 EIF4A; translation initiation factor 4A 
E        110613476 eukaryotic initiation factor 4A-14	K03257 EIF4A; translation initiation factor 4A 
E        110613917 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        110626770 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        110616980 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        110616742 eukaryotic translation initiation factor 4G isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        110615184 eukaryotic translation initiation factor 4G	K03260 EIF4G; translation initiation factor 4G 
E        110631150 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        110600016 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        110617690 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        110611502 tudor domain-containing protein 3 isoform X1	K18404 TDRD3; tudor domain-containing protein 3 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        110626479 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        110622925 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        110619935 mRNA-decapping enzyme-like protein isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        110619374 mRNA-decapping enzyme subunit 2	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        110615933 DEAD-box ATP-dependent RNA helicase 8 isoform X1	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        110615673 DEAD-box ATP-dependent RNA helicase 8 isoform X1	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        110624192 enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        110622782 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        110620876 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        110631027 protein PAT1 homolog	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        110620061 protein PAT1 homolog 2 isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        110616567 protein PAT1 homolog isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        110614034 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        110626836 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        110615018 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        110611921 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        110606038 sm-like protein LSM3B	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        110606771 sm-like protein LSM3B isoform X2	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        110623449 sm-like protein LSM4 isoform X2	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        110619353 sm-like protein LSM4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        110614427 sm-like protein LSM4 isoform X1	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        110627735 sm-like protein LSM5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        110629334 sm-like protein LSM5 isoform X2	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        110607326 sm-like protein LSM36B	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        110628259 sm-like protein LSM36B	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        110624077 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        110624079 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        110607742 sm-like protein LSM8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        110618655 sm-like protein LSM8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        110614829 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        110621412 5'-3' exoribonuclease 4 isoform X1	K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
C    3'-5' decay
D      Core exosome factors
E        110620443 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        110604775 exosome complex component RRP4 homolog	K03679 RRP4; exosome complex component RRP4 
E        110599848 putative exosome complex component rrp40 isoform X1	K03681 RRP40; exosome complex component RRP40 
E        110614858 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        110601768 exosome complex exonuclease RRP46 homolog	K12590 RRP46; exosome complex component RRP46 
E        110612944 exosome complex component RRP41-like isoform X1	K12587 MTR3; exosome complex component MTR3 
E        110611825 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        110620495 exosome complex component RRP43	K12586 RRP43; exosome complex component RRP43 
E        110609623 exosome complex component RRP45A isoform X1	K03678 RRP45; exosome complex component RRP45 
E        110600194 exosome complex component RRP45A isoform X1	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        110610219 exosome complex exonuclease RRP44 homolog A	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        110620753 protein RRP6-like 2	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        110603665 nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        110612405 nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        110622476 uncharacterized protein LOC110622476	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        110610922 terminal nucleotidyltransferase 4B isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        110619281 DExH-box ATP-dependent RNA helicase DExH9	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
E        110606747 DExH-box ATP-dependent RNA helicase DExH10	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        110617278 DExH-box ATP-dependent RNA helicase DExH11 isoform X1	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        110606404 tetratricopeptide repeat protein SKI3 isoform X1	K12600 SKI3; superkiller protein 3 
E        110604221 WD repeat-containing protein VIP3	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        110620823 carbon catabolite repressor protein 4 homolog 1 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        110602555 carbon catabolite repressor protein 4 homolog 4	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        110622721 carbon catabolite repressor protein 4 homolog 1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        110615750 CCR4-NOT transcription complex subunit 1-like isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        110616493 CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        110613778 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        110626409 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        110620847 general negative regulator of transcription subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        110622632 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        110612741 uncharacterized protein LOC110612741 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        110622649 uncharacterized protein LOC110622649 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        110625930 general negative regulator of transcription subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        110625448 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110604254 probable CCR4-associated factor 1 homolog 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110613701 probable CCR4-associated factor 1 homolog 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110626371 probable CCR4-associated factor 1 homolog 7 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110622893 probable CCR4-associated factor 1 homolog 11 isoform X2	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110601349 putative CCR4-associated factor 1 homolog 8	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110616564 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        110610994 CCR4-NOT transcription complex subunit 9 isoform X1	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        110600723 CCR4-NOT transcription complex subunit 9 isoform X1	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        110628063 CCR4-NOT transcription complex subunit 9	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        122721456 CCR4-NOT transcription complex subunit 9-like	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        110599729 CCR4-NOT transcription complex subunit 10 isoform X1	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
E        110617400 CCR4-NOT transcription complex subunit 10 isoform X1	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
E        110627298 ABC transporter I family member 21	K12608 CAF16; CCR4-NOT complex subunit CAF16 
E        110620529 ABC transporter I family member 20 isoform X2	K12608 CAF16; CCR4-NOT complex subunit CAF16 
D      Pan complex
D      Other 3'-5' decay factors
E        110611760 poly(A)-specific ribonuclease PARN isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        110629520 uncharacterized CRM domain-containing protein At3g25440, chloroplastic	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        110630417 poly(A)-specific ribonuclease PARN-like isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        110600976 DExH-box ATP-dependent RNA helicase DExH6 isoform X1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        110599715 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        110622521 DExH-box ATP-dependent RNA helicase DExH1 isoform X1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        110601013 DExH-box ATP-dependent RNA helicase DExH3 isoform X1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        110622708 DExH-box ATP-dependent RNA helicase DExH3	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        110626450 uncharacterized protein LOC110626450	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        110613586 3'-5' exoribonuclease 1	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        110616642 nuclear exosome regulator NRDE2	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        110605335 protein RST1 isoform X2	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        110615604 oligoribonuclease isoform X1	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
E        110605940 ATP-dependent DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
D      Other RNA degradosome components
E        110621324 enolase 2	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        110623458 enolase 2	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        110624827 enolase 1, chloroplastic	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        110617390 cytosolic enolase 3	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        110601795 polyribonucleotide nucleotidyltransferase 2, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        110620742 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        110626452 ATP-dependent 6-phosphofructokinase 6	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110603179 ATP-dependent 6-phosphofructokinase 6 isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110627731 ATP-dependent 6-phosphofructokinase 5, chloroplastic	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110623235 LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase 2	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110610601 ATP-dependent 6-phosphofructokinase 7	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110622561 ATP-dependent 6-phosphofructokinase 2	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110603821 ATP-dependent 6-phosphofructokinase 3 isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110630167 ATP-dependent 6-phosphofructokinase 5, chloroplastic isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        110631218 ATP-dependent 6-phosphofructokinase 4, chloroplastic	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        110619268 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        110624838 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        110625524 chaperonin CPN60-like 2, mitochondrial isoform X1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        110611762 chaperonin 60 subunit beta 2, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        110630906 chaperonin 60 subunit beta 4, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        110602462 chaperonin CPN60-2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        110612158 chaperonin CPN60-2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        110601812 ruBisCO large subunit-binding protein subunit beta, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        110604775 exosome complex component RRP4 homolog	K03679 RRP4; exosome complex component RRP4 
E        110620443 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        110614858 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        110611825 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
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#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: April 25, 2024