+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Candidatus Methylomirabilis oxygeniifera

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors E DAMO_1011 putative Vesicle-fusing ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E DAMO_2103 rng; Ribonuclease G (RNase G) (Cytoplasmic axial filament protein) K08301 rng; ribonuclease G [EC:3.1.26.-] E DAMO_1422 rnc; Ribonuclease 3 (Ribonuclease III) (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3] E DAMO_2623 rnjA; Ribonuclease J 1 (RNase J1) K12574 rnj; ribonuclease J [EC:3.1.-.-] E DAMO_1854 conserved protein of unknown function K18682 rny; ribonucrease Y [EC:3.1.-.-] E DAMO_0850 rnb; putative exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D Helicases E DAMO_2455 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] E DAMO_0421 Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene) K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E DAMO_0396 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E DAMO_2186 eno; Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E DAMO_0581 pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E DAMO_2251 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho C Other RNA degradation factors D Chaperones E DAMO_2769 dnaK; Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK E DAMO_2457 groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others E DAMO_0696 putative Uncharacterized domain HDIG K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E DAMO_1800 Carbon storage regulator homolog (modular protein) K03563 csrA; carbon storage regulator E DAMO_1192 conserved protein of unknown function K06958 rapZ; RNase adapter protein RapZ D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024