+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Myxococcus xanthus

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors E MXAN_2773 ATPase, AAA family K13525 VCP; transitional endoplasmic reticulum ATPase D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E MXAN_5640 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] E MXAN_3762 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E MXAN_1479 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-] E MXAN_0024 3'-5' exoribonuclease, VacB/RNase II family K12573 rnr; ribonuclease R [EC:3.1.13.1] E MXAN_4210 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] E MXAN_7151 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] E MXAN_2808 OB-fold nucleic acid binding domain protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Helicases E MXAN_2309 rhlE; ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E MXAN_4081 putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E MXAN_5230 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E MXAN_3913 deaD; RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E MXAN_5871 dedA; ATP-dependent helicase, DEAD/DEAH-box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E MXAN_1950 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E MXAN_4839 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E MXAN_4451 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E MXAN_2073 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E MXAN_5636 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho E MXAN_2479 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C Other RNA degradation factors D Chaperones E MXAN_3192 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E MXAN_6671 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E MXAN_3474 DnaK family protein K04043 dnaK; molecular chaperone DnaK E MXAN_2747 heat shock protein 70 family protein K04043 dnaK; molecular chaperone DnaK E MXAN_3016 putative chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E MXAN_4047 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E MXAN_5159 DnaK family protein K04043 dnaK; molecular chaperone DnaK E MXAN_5804 DnaK family protein K04043 dnaK; molecular chaperone DnaK E MXAN_7025 DnaK family protein K04043 dnaK; molecular chaperone DnaK E MXAN_3778 DnaK family protein K04043 dnaK; molecular chaperone DnaK E MXAN_6605 DnaK family protein K04043 dnaK; molecular chaperone DnaK E MXAN_4895 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E MXAN_4467 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others E MXAN_0056 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E MXAN_2119 polyphosphate kinase 2, internal deletion K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E MXAN_2545 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E MXAN_0390 putative regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A E MXAN_6564 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ E MXAN_3177 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] E MXAN_2148 helicase, DEAD/DEAH family K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] E MXAN_3055 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024