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Transcription Machinery - Nitrosomonas europaea
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E NE0426 rpoA; Bacterial RNA polymerase, alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E NE2046 rpoB; RNA polymerases beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E NE2045 rpoC; RNA polymerase, alpha subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E NE2255 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E NE0229 rpoD; DNA-dependent RNA polymerase sigma subunits (sigma70/32) K03086 rpoD; RNA polymerase primary sigma factor
E NE2331 rpoE1; Sigma factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E NE0917 probable RNA polymerase sigma factor transcription regulator K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E NE1101 Sigma factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1079 Sigma factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE0128 probable sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE0980 putative sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1071 probable sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1086 probable sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1099 Sigma factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE0533 putative sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE2486 Sigma factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1096 Sigma factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE2435 fecI; Probable fecI Specialized sigma subunits of RNA polymerase K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1617 Sigma factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE1217 putative sigma-70 factor, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E NE0584 rpoH; Sigma-70 factor family K03089 rpoH; RNA polymerase sigma-32 factor
E NE0062 rpoN1; Sigma-54 factor family K03092 rpoN; RNA polymerase sigma-54 factor
E NE2491 fliA; Sigma-70 factor family K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E NE0760 nusA; S1 RNA binding domain:KH domain:Type 1 KH domain K02600 nusA; transcription termination/antitermination protein NusA
E NE2558 nusB; Antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E NE2051 nusG; nusG; Bacterial transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG
E NE0812 sspA; putative sspA; transcription modulator protein K03599 sspA; stringent starvation protein A
E NE0813 sspB; putative stringent starvation protein B K03600 sspB; stringent starvation protein B
E NE2330 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D Transcription elongation factors
E NE0455 Prokaryotic dksA/traR C4-type zinc finger K06204 dksA; RNA polymerase-binding transcription factor
E NE1660 greA; Prokaryotic transcription elongation factor GreA/GreB K03624 greA; transcription elongation factor GreA
E NE1848 greB; Prokaryotic transcription elongation factor GreA/GreB K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E NE1035 rho; rho; Transcription termination factor K03628 rho; transcription termination factor Rho
E NE0186 conserved hypothetical protein K19000 rof; Rho-binding antiterminator
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024