+D GENES KO #

  KEGG Orthology (KO) - Cutibacterium acnes KPA171202

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pac00010] D PPA2359 putative transcriptional repressor protein K25026 glk; glucokinase [EC:2.7.1.2] D PPA0722 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D PPA2131 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA0143 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D PPA0090 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PPA1090 pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA2011 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PPA0818 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PPA0816 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PPA0817 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PPA0364 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0809 putative phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0545 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PPA0769 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PPA2048 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PPA0989 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PPA0693 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA0162 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PPA1904 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PPA1905 pyruvate:ferredoxin oxidoreductase (beta subunit) K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PPA0887 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA0012 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA0539 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PPA1072 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PPA1015 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA2125 polyphosphate glucokinase/transcriptional regulator K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D PPA2052 conserved protein (aldose 1-epimerase family protein) K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D PPA0061 putative glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PPA1146 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PPA0293 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0679 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0294 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:pac00020] D PPA1423 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PPA2272 citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D PPA1061 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PPA1738 isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PPA1261 2-oxoglutarate dehydrogenase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA1904 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PPA1905 pyruvate:ferredoxin oxidoreductase (beta subunit) K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PPA1754 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PPA1755 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PPA2053 coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D PPA1438 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA0951 succinate dehydrogenase, subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA1437 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA0952 succinate dehydrogenase, subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA1439 succinate dehydrogenase cytochrome B-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA0950 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA2292 fumarate hydratase, class-II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PPA0989 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PPA0693 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PPA0162 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:pac00030] D PPA2131 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PPA1563 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PPA1565 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D PPA1524 conserved protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D PPA1629 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PPA1199 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PPA2318 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PPA0454 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PPA1624 sugar isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PPA2324 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PPA2045 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PPA1214 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PPA0018 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15] D PPA1211 sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA0531 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PPA0371 KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PPA2133 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PPA0739 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D PPA0370 carbohydrate kinase, PfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D PPA0883 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA2011 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA0143 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D PPA0090 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PPA1090 pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:pac00040] D PPA2329 uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D PPA2327 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D PPA2328 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D PPA2333 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D PPA0593 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PPA0489 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PPA0880 hexulose phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D PPA0881 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D PPA0882 L-ribulose-5-phosphate-4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PPA2325 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PPA1199 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PPA2319 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D PPA0918 putative zinc-binding sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PPA0621 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PPA0609 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] C 00051 Fructose and mannose metabolism [PATH:pac00051] D PPA0451 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PPA0008 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PPA1723 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PPA1696 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PPA0609 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA0143 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D PPA0090 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PPA1090 pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D PPA0918 putative zinc-binding sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PPA0621 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA2011 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PPA0818 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PPA1624 sugar isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PPA2324 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PPA2232 PTS system, fructose/mannitol specific IIA subunit K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PPA0142 phosphotransferase system K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PPA0919 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D PPA0030 putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D PPA1486 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PPA0355 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PPA1485 PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D PPA1484 PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component C 00052 Galactose metabolism [PATH:pac00052] D PPA1015 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PPA2192 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PPA2287 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PPA0069 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PPA0489 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA2359 putative transcriptional repressor protein K25026 glk; glucokinase [EC:2.7.1.2] D PPA0722 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D PPA1700 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PPA2057 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D PPA0021 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D PPA0365 putative PTS system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D PPA0023 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0356 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0366 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0022 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA0143 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D PPA0090 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PPA1630 alpha-glucosidase/amylase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PPA2332 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:pac00053] D PPA0593 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PPA2333 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D PPA0447 phosphotransferase system protein, mannitol/fructose-specific IIA subunit K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PPA0446 putative sugar-specific permease K03475 ulaA; ascorbate PTS system EIIC component D PPA0880 hexulose phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D PPA0881 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D PPA0882 L-ribulose-5-phosphate-4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PPA2325 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:pac00500] D PPA1142 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PPA1630 alpha-glucosidase/amylase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PPA2332 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PPA0489 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PPA1149 PTS cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PPA1147 PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PPA1148 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D PPA0061 putative glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PPA1146 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PPA0640 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D PPA1111 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PPA0081 carbohydrate phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PPA1115 putative glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D PPA1113 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D PPA0592 alpha-amylase 3 K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D PPA1683 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PPA1112 uncharacterized protein probably involved in trehalose biosynthesis K16146 pep2; maltokinase [EC:2.7.1.175] D PPA1114 putative alpha-amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D PPA0639 putative glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D PPA0293 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0679 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0961 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D PPA0962 phosphatase, putative trehalose-6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D PPA1108 trehalose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA2359 putative transcriptional repressor protein K25026 glk; glucokinase [EC:2.7.1.2] D PPA0722 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D PPA2131 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pac00520] D PPA2164 putative beta-N-acetylglucosaminidase precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PPA1645 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PPA0066 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA1820 beta-galactosidase fused to beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA0293 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0679 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0675 PTS system, glucose-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PPA0484 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D PPA0476 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D PPA1144 putative N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D PPA1794 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PPA1801 phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PPA0530 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PPA0922 putative UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D PPA1141 predicted aminotransferase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D PPA1226 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PPA1894 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PPA1997 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D PPA0148 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PPA0134 putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D PPA2308 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D PPA0294 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PPA2359 putative transcriptional repressor protein K25026 glk; glucokinase [EC:2.7.1.2] D PPA0722 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D PPA2125 polyphosphate glucokinase/transcriptional regulator K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA0489 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PPA0593 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PPA2192 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PPA2287 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PPA0069 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PPA2131 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PPA0451 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PPA0008 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PPA1723 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PPA1696 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PPA0640 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:pac00620] D PPA0162 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PPA1904 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PPA1905 pyruvate:ferredoxin oxidoreductase (beta subunit) K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PPA0989 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PPA0693 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA0539 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PPA1072 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PPA0769 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PPA1719 putative biotin-dependent acetyl/propionyl-CoA (acyl-CoA) carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PPA2053 coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D PPA0887 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA0012 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1468 cytochrome-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D PPA0775 oxidoreductase, putative D-lactate dehydrogenase K18930 dld; D-lactate dehydrogenase D PPA1168 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PPA0313 putative malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PPA0888 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PPA2292 fumarate hydratase, class-II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PPA2334 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38] D PPA2048 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PPA0941 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pac00630] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PPA1423 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PPA2272 citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D PPA1061 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PPA1104 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PPA1719 putative biotin-dependent acetyl/propionyl-CoA (acyl-CoA) carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PPA1707 propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D PPA0596 methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0595 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0097 catalase K03781 katE; catalase [EC:1.11.1.6] D PPA2251 D-isomer specific 2-hydroxyacid dehydrogenase, putative D-3-phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D PPA0671 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PPA0742 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PPA0744 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA0743 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D PPA1083 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D PPA2299 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PPA0371 KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PPA2133 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PPA1261 2-oxoglutarate dehydrogenase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D PPA1739 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:pac00640] D PPA2094 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D PPA2093 pyruvate dehydrogenase E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D PPA2092 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA1719 putative biotin-dependent acetyl/propionyl-CoA (acyl-CoA) carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PPA2008 methylmalonyl-CoA carboxyltransferase K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1] D PPA2007 methylmalonyl-CoA carboxyltransferase K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1] D PPA2006 C-terminal fragment of methylmalonyl-CoA carboxyltransferase K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1] D PPA2005 biotin carboxyl carrier protein of methylmalonyl-CoA carboxyl-transferase (transcarboxylase, 1.3S subunit) K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1] D PPA1707 propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D PPA1104 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PPA0596 methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0595 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA1755 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PPA1754 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PPA0461 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PPA0887 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA0012 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:pac00650] D PPA1438 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA0951 succinate dehydrogenase, subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA1437 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA0952 succinate dehydrogenase, subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA1439 succinate dehydrogenase cytochrome B-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA0950 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA0079 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PPA2053 coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D PPA0162 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PPA1904 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PPA1905 pyruvate:ferredoxin oxidoreductase (beta subunit) K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PPA1373 acetolactate synthase small subunit fragment K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:pac00660] D PPA1373 acetolactate synthase small subunit fragment K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PPA1755 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PPA1754 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PPA1362 3-isopropylmalate dehydratase large subunit fragment K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PPA1363 3-isopropylmalate dehydratase large subunit fragment K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PPA1361 3-isopropylmalate dehydratase small subunit fragment K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] C 00562 Inositol phosphate metabolism [PATH:pac00562] D PPA0469 putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PPA0468 putative myo-inositol catabolism protein K03335 iolE; inosose dehydratase [EC:4.2.1.44] D PPA0459 thiamine pyrophosphate-requiring enzyme, putative acetolactate synthase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D PPA0458 putative myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D PPA0456 carbohydrate kinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D PPA0461 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PPA0818 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pac00190] D PPA1936 NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PPA1935 NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PPA1903 NADH dehydrogenase subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PPA1934 NADH dehydrogenase I chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D PPA1902 NADH dehydrogenase subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D PPA1933 NADH dehydrogenase I chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D PPA0276 putative NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D PPA1932 NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PPA1931 NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PPA1930 NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D PPA1929 NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PPA1928 NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PPA1901 NADH dehydrogenase subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PPA1926 NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D PPA1925 NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D PPA1924 NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PPA1923 NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PPA1922 NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PPA0152 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PPA1438 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA0951 succinate dehydrogenase, subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA1437 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA0952 succinate dehydrogenase, subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA1439 succinate dehydrogenase cytochrome B-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA0950 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA0711 ubiquinol-cytochrome c reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PPA0710 cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D PPA0712 cytochrome c heme-binding subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D PPA1561 conserved membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PPA0703 conserved protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D PPA0713 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D PPA0702 cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D PPA0701 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D PPA0649 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA1559 conserved membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA0176 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PPA0175 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PPA1241 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PPA1239 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PPA1240 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PPA1242 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PPA1238 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PPA1245 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PPA1243 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PPA1244 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PPA0256 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D PPA0343 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PPA1186 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:pac00710] D PPA0817 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PPA0816 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA2011 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PPA2318 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PPA1624 sugar isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PPA2324 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PPA0818 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PPA1199 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PPA0454 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PPA2048 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:pac00720] D PPA0162 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PPA2048 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PPA2292 fumarate hydratase, class-II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PPA1438 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA0951 succinate dehydrogenase, subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PPA1437 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA0952 succinate dehydrogenase, subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PPA1439 succinate dehydrogenase cytochrome B-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA0950 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PPA1754 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PPA1755 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PPA1904 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PPA1905 pyruvate:ferredoxin oxidoreductase (beta subunit) K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PPA1738 isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PPA1061 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PPA2185 conserved protein, MaoC like domain K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] D PPA1104 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PPA0596 methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0595 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0049 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D PPA1743 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] C 00680 Methane metabolism [PATH:pac00680] D PPA0369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PPA0545 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA2011 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA0143 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D PPA0090 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PPA0364 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0809 putative phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA1272 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PPA0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PPA2051 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:pac00910] D PPA0511 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D PPA0510 nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D PPA0509 nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D PPA0507 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D PPA0092 conserved membrane protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D PPA1975 nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D PPA1329 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PPA1513 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PPA0671 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA1134 large subunit of NADH-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PPA1135 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PPA0585 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:pac00920] D PPA1765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PPA0963 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PPA1218 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PPA0517 anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D PPA0516 anaerobic dimethyl sulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pac00061] D PPA1719 putative biotin-dependent acetyl/propionyl-CoA (acyl-CoA) carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PPA0982 acyl carrier protein K02078 acpP; acyl carrier protein D PPA0984 malonyl CoA-acyl carrier protein malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PPA0983 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PPA0980 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PPA1815 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PPA1632 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA1724 putative fatty acid--CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA2234 putative long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pac00071] D PPA1632 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA1724 putative fatty acid--CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA2234 putative long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA0539 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pac00561] D PPA2299 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PPA1072 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PPA1947 conserved protein with kinase domain of diacylglycerol kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D PPA1948 conserved protein with phosphatase domain of diacylglycerol kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D PPA1949 PTS protein, putative dihydroxyacetone kinase phosphotransfer protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D PPA2304 glycerol kinase 2 K00864 glpK; glycerol kinase [EC:2.7.1.30] D PPA1401 putative hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D PPA0724 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA2237 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA1360 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA2057 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:pac00564] D PPA2315 probable glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D PPA2250 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PPA2249 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D PPA2248 anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D PPA0724 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA2237 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA1360 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA1224 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PPA1839 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PPA1517 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PPA1007 phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PPA1761 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D PPA1079 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D PPA1488 arabinose operon protein AraM K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D PPA2320 L-arabinose utilization protein, glycerol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:pac00600] D PPA1700 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PPA0684 sialidase B K01186 NEU1; sialidase-1 [EC:3.2.1.18] D PPA0685 sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18] D PPA1560 sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18] D PPA2057 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D PPA0066 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA1820 beta-galactosidase fused to beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D PPA1030 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pac00230] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA0531 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PPA1970 amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PPA1993 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PPA1748 folate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PPA1977 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D PPA1988 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PPA1987 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PPA1969 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PPA1702 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D PPA1701 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PPA1992 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PPA1747 Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PPA1164 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PPA2097 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PPA1954 predicted sugar phosphatase/hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PPA1722 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PPA0762 conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PPA2076 inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D PPA0259 putative hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PPA1767 IMP dehydrogenase / GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PPA1768 IMP dehydrogenase / GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PPA0823 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PPA1673 putative nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PPA1764 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PPA0708 inosine monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7] D PPA1190 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D PPA2121 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PPA1026 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PPA2122 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PPA2137 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PPA0955 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D PPA1166 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PPA0548 hydrolase, Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PPA1994 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PPA2273 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D PPA1871 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D PPA1834 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PPA1077 putative HIT family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D PPA0585 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:pac00240] D PPA1000 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PPA0999 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PPA0997 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PPA0998 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PPA1002 dihydroorotate dehydrogenase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D PPA1001 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D PPA0161 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D PPA1004 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PPA1003 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PPA1519 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PPA0823 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PPA1709 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PPA1390 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D PPA1209 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PPA1725 putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D PPA2097 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PPA1954 predicted sugar phosphatase/hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PPA2184 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PPA0995 pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PPA1871 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D PPA1730 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PPA2137 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PPA2121 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PPA1026 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PPA2122 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PPA1950 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PPA0243 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PPA1054 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PPA1367 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D PPA1049 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D PPA1672 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PPA2167 N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pac00250] D PPA0367 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PPA2114 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PPA2268 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PPA2274 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PPA0094 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PPA2201 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PPA1346 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PPA1994 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PPA1992 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PPA0997 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PPA0079 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PPA1134 large subunit of NADH-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PPA1135 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PPA1329 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PPA1513 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PPA0620 NAD-dependent aldehyde dehydrogenases K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PPA0671 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA1000 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PPA0999 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PPA1987 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PPA1794 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PPA1970 amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pac00260] D PPA2148 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PPA0318 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PPA1258 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PPA1256 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D PPA1257 probable threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PPA0369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PPA2299 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PPA0364 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0809 putative phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA1272 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PPA0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PPA2051 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PPA0403 aminotransferase, putative 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PPA0402 threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D PPA0250 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PPA0742 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PPA0744 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA0743 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D PPA1083 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D PPA0632 glycine amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1] D PPA0396 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PPA1132 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PPA1131 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pac00270] D PPA1765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PPA0963 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PPA1587 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PPA1193 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PPA1093 5`-methylthioadenosine/S-adenosylhomocysteine nuclosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D PPA0762 conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PPA0450 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PPA2148 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PPA0318 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PPA1258 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PPA1218 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PPA1368 probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PPA0887 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA0012 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1740 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PPA0396 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PPA1272 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PPA0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pac00280] D PPA1368 probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PPA2094 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D PPA2093 pyruvate dehydrogenase E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D PPA2092 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA1719 putative biotin-dependent acetyl/propionyl-CoA (acyl-CoA) carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D PPA1707 propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D PPA1104 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PPA0596 methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0595 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0461 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pac00290] D PPA1362 3-isopropylmalate dehydratase large subunit fragment K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PPA1363 3-isopropylmalate dehydratase large subunit fragment K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PPA1361 3-isopropylmalate dehydratase small subunit fragment K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PPA1373 acetolactate synthase small subunit fragment K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PPA1372 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PPA1368 probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PPA0941 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pac00300] D PPA1258 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PPA2148 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PPA0318 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PPA0642 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PPA1998 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PPA1470 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PPA0630 transferase, putative tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D PPA1347 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PPA0636 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PPA1020 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PPA1259 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PPA2337 probable aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D PPA0753 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PPA0754 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pac00310] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA0079 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PPA2276 conserved oxidoreductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] C 00220 Arginine biosynthesis [PATH:pac00220] D PPA0584 ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PPA2201 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PPA1346 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PPA0583 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D PPA1987 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PPA0671 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA1000 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PPA0999 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PPA0585 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D PPA1329 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PPA1513 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PPA1349 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D PPA1348 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D PPA1350 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D PPA1347 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:pac00330] D PPA0632 glycine amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1] D PPA0250 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PPA2054 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PPA0319 putative delta-1-pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PPA0316 putative proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D PPA0620 NAD-dependent aldehyde dehydrogenases K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PPA0834 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PPA0835 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PPA0932 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PPA2276 conserved oxidoreductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] C 00340 Histidine metabolism [PATH:pac00340] D PPA1417 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PPA1418 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D PPA1126 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D PPA1156 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D PPA1155 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PPA1376 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PPA1154 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D PPA0034 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1153 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1271 putative inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D PPA1152 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D PPA2170 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D PPA2166 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D PPA2169 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D PPA0250 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:pac00350] D PPA0034 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1153 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA0250 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PPA0539 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PPA0079 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PPA0806 hypothetical protein K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4] C 00360 Phenylalanine metabolism [PATH:pac00360] D PPA0250 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PPA0034 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1153 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA2054 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PPA1547 putative dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component C 00380 Tryptophan metabolism [PATH:pac00380] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA1068 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D PPA0250 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PPA2054 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PPA0097 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pac00400] D PPA0726 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PPA1184 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PPA1686 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PPA1183 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D PPA1268 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PPA1182 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PPA1156 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D PPA1130 indole-3-glycerol phosphate synthase 1 K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D PPA1132 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PPA1131 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PPA1766 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D PPA1208 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D PPA0034 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1153 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pac00410] D PPA2167 N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D PPA0461 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pac00430] D PPA2268 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PPA2274 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PPA1329 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pac00450] D PPA1545 putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PPA2309 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PPA1728 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pac00460] D PPA0367 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PPA2114 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PPA0369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pac00470] D PPA2285 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1] D PPA2338 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA1359 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA1987 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PPA1675 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PPA0756 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PPA1020 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PPA1259 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PPA2276 conserved oxidoreductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] D PPA2282 amino acid racemase K21898 orr; ornithine racemase [EC:5.1.1.12] D PPA2280 D-ornithine aminomutase E component K17898 oraE; D-ornithine 4,5-aminomutase subunit beta [EC:5.4.3.5] D PPA2279 D-ornithine aminomutase S component K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5] C 00480 Glutathione metabolism [PATH:pac00480] D PPA0282 lactam utilization protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D PPA0694 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PPA1627 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PPA1979 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PPA1738 isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PPA1629 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PPA1563 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:pac00515] D PPA0523 putative dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:pac00514] D PPA0523 putative dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pac00511] D PPA0684 sialidase B K01186 NEU1; sialidase-1 [EC:3.2.1.18] D PPA0685 sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18] D PPA1560 sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18] D PPA1700 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PPA0066 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA1820 beta-galactosidase fused to beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA0062 glycosyl hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D PPA1459 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D PPA1033 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D PPA0607 glycosyl hydrolase, putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PPA2070 alpha-L-fucosidase precursor K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PPA0089 conserved protein, glycosyl hydrolase family K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:pac00542] D PPA1248 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pac00541] D PPA0489 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PPA0069 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PPA0593 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PPA2288 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PPA0451 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PPA0008 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PPA1723 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PPA1696 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PPA0530 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PPA0148 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PPA0134 putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:pac00550] D PPA1226 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PPA1894 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PPA0759 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PPA0756 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PPA0753 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PPA2338 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA1359 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA0754 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PPA2224 putative undecaprenol kinase (bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PPA0755 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PPA0758 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PPA0752 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PPA0185 putative penicillin-binding protein K05364 pbpA; penicillin-binding protein A D PPA0257 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PPA1137 putative beta-lactamase class C K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D PPA1653 putative UDP-N-acetylmuramyl tripeptide synthase (Mur ligase) K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D PPA1654 putative cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:pac00552] D PPA2224 putative undecaprenol kinase (bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PPA1248 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PPA2190 membrane-associated protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pac00543] D PPA1248 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PPA1765 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PPA1698 succinoglycan biosynthesis protein ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pac00730] D PPA0110 putative thiamine biosynthesis protein K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D PPA1116 aminotransferase class V, putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PPA0520 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D PPA1062 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PPA0519 thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D PPA0885 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PPA0886 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PPA0112 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PPA1357 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PPA1269 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PPA1834 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PPA1507 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:pac00740] D PPA1750 riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PPA1752 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PPA1749 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PPA1751 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PPA0064 putative hydrolase K20884 FHY; riboflavin kinase / FMN hydrolase [EC:2.7.1.26 3.1.3.102] D PPA1474 riboflavin biosynthesis protein RibF (riboflavin kinase) K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D PPA0885 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:pac00750] D PPA1225 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D PPA1712 putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D PPA0555 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D PPA0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PPA1257 probable threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PPA0965 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D PPA0966 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:pac00760] D PPA1681 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PPA1722 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PPA2097 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PPA1954 predicted sugar phosphatase/hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PPA0836 probable nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PPA1318 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D PPA2266 glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D PPA1008 putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D PPA0993 pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D PPA2172 putative NaMN:DMB phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PPA1395 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PPA0625 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D PPA0626 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D PPA0079 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:pac00770] D PPA1373 acetolactate synthase small subunit fragment K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PPA1372 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PPA0985 putative ketopantoate reductase PanE/ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PPA1799 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D PPA1192 phosphopantothenoylcysteine synthetase/decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PPA1463 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PPA0785 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PPA1793 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D PPA1291 biosurfactants production protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D PPA1368 probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PPA2167 N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] C 00780 Biotin metabolism [PATH:pac00780] D PPA0980 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PPA1815 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PPA1866 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PPA0967 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PPA0968 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PPA1407 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D PPA1705 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pac00785] D PPA0692 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D PPA0689 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA0989 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PPA0693 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PPA1261 2-oxoglutarate dehydrogenase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D PPA2094 pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D PPA2093 pyruvate dehydrogenase E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D PPA2092 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D PPA0742 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PPA0744 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PPA0743 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D PPA1083 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pac00790] D PPA0261 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PPA0272 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D PPA0273 putative hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PPA0271 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PPA1671 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PPA0821 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D PPA1750 riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PPA1976 para-aminobenzoate synthase K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D PPA2261 aminotransferase, class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D PPA0502 molybdenum cofactor biosynthesis enzyme K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PPA0498 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PPA0500 molybdopterin synthase MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PPA0499 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PPA0494 putative molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:pac00670] D PPA1671 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PPA0049 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D PPA1743 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PPA0369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PPA1748 folate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PPA1747 Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PPA1195 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PPA0744 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PPA1672 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PPA1739 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PPA0493 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pac00860] D PPA1383 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1869 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA0307 glutamyl-tRNA reductase, HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D PPA0301 glutamate-1-semialdehyde 2,1-aminomutase, HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PPA0302 delta-aminolevulinic acid dehydratase, HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PPA0304 porphobilinogen deaminase, HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PPA0303 uroporphyrinogen-III synthase, HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PPA0306 uroporphyrinogen decarboxylase, HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D PPA0305 putative protoporphyrinogen oxidase, HemY K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D PPA2095 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D PPA0308 ferrochelatase, HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D PPA0323 uroporphyrinogen-III synthase, HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D PPA0439 uroporphyrinogen III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PPA2096 molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D PPA1561 conserved membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PPA0649 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA1559 conserved membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA0423 cobalamin synthesis protein, fusion CysG+CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D PPA0420 tetrapyrrole methylase, putative precorrin-2 C20-methyltransferase, CbiL K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D PPA0422 tetrapyrrole methylase, putative CbiE/G/H fusion protein K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D PPA0421 tetrapyrrole methylase, putative precorrin-3 methylase, CbiF K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D PPA1920 putative CobF protein (tetrapyrrole methylase) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D PPA0440 precorrin-6x reductase CbiJ/CobK K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D PPA0436 precorrin 8 decarboxylase CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D PPA0429 precorrin 8X methylmutase CbiC K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D PPA0438 cobyrinic acid A,C-diamide synthase, CbiA K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D PPA0102 cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D PPA0790 CobN/magnesium chelatase, putative subunit H K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D PPA0791 CobN/magnesium chelatase subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D PPA1236 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PPA0437 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PPA0419 cobyrinic acid a,c-diamide synthase CbiP K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D PPA0418 cobalamin biosynthesis CobD/CbiB protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D PPA0442 putative cobalamin-5-phosphate synthase, CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D PPA0441 phosphoribosyltransferase, cobalamin biosynthesis enzyme, fusion CobTU K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D PPA0953 phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D PPA0788 magnesium-chelatase subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D PPA0101 magnesium-chelatase 67 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D PPA0100 magnesium-chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D PPA0787 magnesium-chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D PPA2333 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pac00130] D PPA1943 ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PPA1940 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D PPA0904 isochorismate synthetase, enterochelin biosynthesis K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D PPA0903 menaquinone biosynthesis protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D PPA0902 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D PPA0906 O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D PPA0907 naphthoate synthase MenB K01661 menB; naphthoate synthase [EC:4.1.3.36] D PPA1945 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pac00900] D PPA1062 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PPA1510 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PPA0353 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D PPA0527 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D PPA0354 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D PPA1506 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PPA0572 IspH, non-mevalonate pathway of isoprenoid biosynthesis K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D PPA2115 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PPA0732 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PPA0564 undecaprenyl pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PPA2318 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D PPA2288 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D PPA1940 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D PPA0904 isochorismate synthetase, enterochelin biosynthesis K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:pac00332] D PPA0834 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PPA0835 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pac00261] D PPA2148 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PPA0318 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PPA0642 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PPA1998 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PPA1470 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pac00521] D PPA2359 putative transcriptional repressor protein K25026 glk; glucokinase [EC:2.7.1.2] D PPA0722 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D PPA1105 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PPA0469 putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PPA2288 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PPA2359 putative transcriptional repressor protein K25026 glk; glucokinase [EC:2.7.1.2] D PPA0722 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D PPA2288 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis [PATH:pac00401] D PPA1208 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D PPA0034 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1153 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D PPA0984 malonyl CoA-acyl carrier protein malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PPA1815 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:pac00998] D PPA0982 acyl carrier protein K02078 acpP; acyl carrier protein D PPA1290 cystathionine beta-synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] C 00999 Biosynthesis of various plant secondary metabolites D PPA1587 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PPA1193 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites [PATH:pac00997] D PPA1292 hypothetical protein, putative transcriptional regulator K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225] D PPA1290 cystathionine beta-synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] D PPA2282 amino acid racemase K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D PPA2054 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:pac00625] D PPA0539 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:pac00643] D PPA2054 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:pac00626] D PPA0539 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pac03020] D PPA1884 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PPA1883 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PPA1826 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PPA1191 probable DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D PPA0473 DNA or RNA helicase of superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pac03010] D PPA0778 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PPA1521 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PPA1857 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PPA1827 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PPA1844 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PPA2230 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PPA1876 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PPA1848 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PPA1802 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PPA1865 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PPA1828 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PPA1878 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PPA1829 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PPA1849 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PPA2161 30S ribosomal protein S14-2 K02954 RP-S14; small subunit ribosomal protein S14 D PPA1472 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PPA1443 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PPA1853 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PPA2228 30S ribosomal protein S18-1 K02963 RP-S18; small subunit ribosomal protein S18 D PPA1859 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PPA0898 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PPA1889 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PPA1860 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PPA1863 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PPA1862 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PPA1850 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PPA1846 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PPA1885 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PPA2227 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PPA1887 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PPA1890 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PPA1803 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PPA1852 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PPA1842 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PPA1856 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PPA1825 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PPA1845 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PPA1435 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PPA1412 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PPA0827 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PPA1858 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PPA1861 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PPA1851 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PPA0535 ribosomal L25P family protein K02897 RP-L25; large subunit ribosomal protein L25 D PPA0829 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PPA2158 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PPA1855 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PPA1843 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PPA2157 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D PPA1253 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PPA2162 50S ribosomal protein L32-2 K02911 RP-L32; large subunit ribosomal protein L32 D PPA1897 50S ribosomal protein L33 type 2 K02913 RP-L33; large subunit ribosomal protein L33 D PPA2160 50S ribosomal protein L33 type 1 K02913 RP-L33; large subunit ribosomal protein L33 D PPA2353 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PPA1413 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PPA1831 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PPA2417 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2436 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2444 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2418 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2443 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2435 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2419 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2442 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2434 5SrRNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pac00970] D PPA2409 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PPA2421 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PPA2414 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PPA2429 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2459 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2413 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2440 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2422 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PPA2453 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PPA2425 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PPA2433 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PPA2415 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PPA2432 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PPA2452 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PPA2426 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PPA2438 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PPA2455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PPA2441 tRNA-His K14226 tRNA-His; tRNA His D PPA2408 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PPA2446 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2437 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2456 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2416 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2451 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PPA2445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PPA2423 tRNA-Met K14230 tRNA-Met; tRNA Met D PPA2430 tRNA-Met K14230 tRNA-Met; tRNA Met D PPA2448 tRNA-Met K14230 tRNA-Met; tRNA Met D PPA2454 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PPA2457 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PPA2428 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PPA2439 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PPA2458 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2460 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2461 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2449 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PPA2411 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PPA2412 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PPA2447 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PPA2450 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PPA2427 tRNA-Val K14237 tRNA-Val; tRNA Val D PPA2424 tRNA-Val K14237 tRNA-Val; tRNA Val D PPA2431 tRNA-Val K14237 tRNA-Val; tRNA Val D PPA1383 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1869 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1123 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PPA1124 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PPA1122 glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PPA1870 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PPA1178 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PPA1175 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PPA0949 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PPA1076 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PPA2219 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PPA0384 tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PPA1728 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PPA1195 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PPA1568 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PPA0893 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PPA0216 putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PPA0181 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PPA1621 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PPA2128 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PPA1499 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PPA1169 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PPA1409 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PPA1408 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PPA1404 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PPA1327 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pac03060] D PPA1835 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D PPA1892 putative SecE/Sec61-gamma subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE D PPA0819 putative SecG-like membrane spanning protein K03075 secG; preprotein translocase subunit SecG D PPA1162 translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PPA1163 translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PPA1161 translocase subunit K03210 yajC; preprotein translocase subunit YajC D PPA2350 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D PPA1333 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PPA1445 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PPA1447 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D PPA1379 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D PPA0643 conserved protein, putative twin arginine translocation complex component K03117 tatB; sec-independent protein translocase protein TatB D PPA1378 Sec-independent protein translocase protein TatC homolog K03118 tatC; sec-independent protein translocase protein TatC D PPA1434 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PPA0767 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pac04122] D PPA1116 aminotransferase class V, putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PPA1117 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PPA0500 molybdopterin synthase MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PPA0502 molybdenum cofactor biosynthesis enzyme K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PPA0501 putative molybdopterin converting factor K03636 moaD; sulfur-carrier protein D PPA0518 putative molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PPA0498 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome [PATH:pac03050] D PPA1207 20S proteasome alpha-subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PPA1206 20S proteasome beta-subunit precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:pac03018] D PPA0826 conserved protein, putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D PPA0545 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PPA1471 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PPA0921 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PPA1254 transcription termination factor Rho K03628 rho; transcription termination factor Rho D PPA1014 conserved protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D PPA1467 metal dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA2040 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PPA1772 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0453 60 kDa chaperonin TCP-1/Cpn60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0343 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PPA1186 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D PPA2301 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pac03030] D PPA0720 DNA polymerase III epsilon subunit (3'-5' exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1727 putative DNA polymerase III epsilon subunit (exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PPA0204 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PPA0244 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PPA0897 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PPA0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PPA2244 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PPA0957 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PPA2229 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1637 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1729 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PPA1433 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PPA0774 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PPA1626 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pac03410] D PPA0223 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PPA0558 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PPA0300 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PPA2247 putative 3-methylpurine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D PPA1451 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PPA1623 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PPA1235 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PPA1898 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PPA2235 probable endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PPA0774 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PPA1626 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pac03420] D PPA0541 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PPA0807 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D PPA0803 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D PPA0812 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D PPA1756 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1314 putative DNA helicase II homolog K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1319 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA0852 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA0774 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PPA1626 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PPA0473 DNA or RNA helicase of superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:pac03430] D PPA1756 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1314 putative DNA helicase II homolog K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1319 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA0852 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA0569 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PPA0568 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PPA2229 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1637 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PPA0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PPA0204 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PPA0897 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PPA0244 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PPA0720 DNA polymerase III epsilon subunit (3'-5' exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1727 putative DNA polymerase III epsilon subunit (exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1626 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:pac03440] D PPA2229 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1637 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D PPA0944 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PPA0206 putative recombination protein RecR K06187 recR; recombination protein RecR D PPA1012 RecA protein K03553 recA; recombination protein RecA D PPA0774 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PPA1159 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PPA1160 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PPA1158 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PPA1466 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PPA1316 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PPA1315 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PPA1317 exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PPA1150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PPA0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PPA0204 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PPA0897 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PPA0244 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PPA0720 DNA polymerase III epsilon subunit (3'-5' exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1727 putative DNA polymerase III epsilon subunit (exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1194 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:pac03250] D PPA0718 probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pac02010] D PPA0504 putative molybdate-binding protein precursor K02020 modA; molybdate transport system substrate-binding protein D PPA0505 ABC transporter, putative molybdenum transport system K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PPA1475 substrate binding component of glycine/betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D PPA2017 periplasmic binding protein of proline/glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D PPA1476 glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein D PPA1477 putative glycine betaine/proline ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D PPA0404 putative substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D PPA0405 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein D PPA0406 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein D PPA0407 putative ABC transporter ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PPA0395 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PPA1552 putative periplasmic maltose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PPA1553 maltose transport system permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PPA1554 maltose transport system permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PPA2058 putative secreted sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D PPA2060 binding-protein-dependent transport system permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D PPA1657 binding-protein-dependent transport system inner membrane component K10237 thuF; trehalose/maltose transport system permease protein D PPA1658 binding-protein-dependent transport system inner membrane component K10238 thuG; trehalose/maltose transport system permease protein D PPA0085 periplasmic protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein D PPA0086 putative permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein D PPA0087 permease protein K10202 ngcG; N-acetylglucosamine transport system permease protein D PPA0059 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein D PPA0058 transport permease K10241 cebF; cellobiose transport system permease protein D PPA0057 sugar transport permease BglB K10242 cebG; cellobiose transport system permease protein D PPA0604 conserved protein, putative sugar binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D PPA1454 solute-binding protein of transport system K17244 chiE; putative chitobiose transport system substrate-binding protein D PPA0605 putative sugar transport protein K17245 chiF; putative chitobiose transport system permease protein D PPA2403 hypothetical protein K17245 chiF; putative chitobiose transport system permease protein D PPA1455 transport system permease K17245 chiF; putative chitobiose transport system permease protein D PPA0606 putative transport system permease protein K17246 chiG; putative chitobiose transport system permease protein D PPA1456 transport system permease K17246 chiG; putative chitobiose transport system permease protein D PPA1734 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D PPA1732 ABC transporter associated permease K23535 nupB; general nucleoside transport system permease protein D PPA1731 ABC transporter associated permease K23536 nupC; general nucleoside transport system permease protein D PPA1733 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D PPA1966 bacterial extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D PPA1965 binding-protein-dependent transport permease K17316 gtsB; glucose/mannose transport system permease protein D PPA1964 binding-protein-dependent transport permease K17317 gtsC; glucose/mannose transport system permease protein D PPA0017 periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D PPA0016 ribose ABC transporter K10440 rbsC; ribose transport system permease protein D PPA0015 ABC transporter protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PPA0019 high affinity ribose transport protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D PPA0341 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D PPA0340 putative phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D PPA0339 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D PPA0338 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PPA1758 outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D PPA1760 ABC transporter associated permease K02072 metI; D-methionine transport system permease protein D PPA1759 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D PPA2152 putative peptide transport system secreted peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PPA2153 putative peptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein D PPA2154 putative peptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein D PPA2155 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PPA2156 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D PPA1840 extracellular solute-binding transport protein, putative oligopeptide-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D PPA0432 putative cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D PPA0430 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D PPA0433 cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D PPA0434 membrane associated cobalt transport protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PPA1400 BioY family protein K03523 bioY; biotin transport system substrate-specific component D PPA1398 cobalt permease or related transporter K16783 bioN; biotin transport system permease protein D PPA1399 ABC-type transporter, ATPase component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D PPA1812 ABC transporter-associated permease K16785 ecfT; energy-coupling factor transport system permease protein D PPA2085 ABC transporter associated permease (putative cobalt transport system) K16785 ecfT; energy-coupling factor transport system permease protein D PPA1352 cell division protein K09811 ftsX; cell division transport system permease protein D PPA1353 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D PPA2082 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D PPA0179 ABC-type transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D PPA0178 putative ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D PPA0173 transport ATP-binding protein, CydCD K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D PPA0174 transport ATP-binding protein, CydCD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:pac02060] D PPA0351 putative phosphoenolpyruvate-protein kinase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PPA0141 hypothetical protein K02784 ptsH; phosphocarrier protein HPr D PPA0352 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D PPA1487 PTS HPr component K02784 ptsH; phosphocarrier protein HPr D PPA0293 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0679 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0294 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PPA0675 PTS system, glucose-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PPA1142 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PPA1109 phosphoenolpyruvate sugar phosphotransferase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PPA0919 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D PPA1149 PTS cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PPA1147 PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PPA1148 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D PPA1486 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PPA0355 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PPA1485 PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D PPA1484 PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component D PPA0021 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D PPA0365 putative PTS system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D PPA0023 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0356 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0366 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0022 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D PPA0447 phosphotransferase system protein, mannitol/fructose-specific IIA subunit K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PPA0446 putative sugar-specific permease K03475 ulaA; ascorbate PTS system EIIC component D PPA0142 phosphotransferase system K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PPA2232 PTS system, fructose/mannitol specific IIA subunit K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] C 03070 Bacterial secretion system [PATH:pac03070] D PPA1162 translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PPA1163 translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PPA1892 putative SecE/Sec61-gamma subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE D PPA0819 putative SecG-like membrane spanning protein K03075 secG; preprotein translocase subunit SecG D PPA1835 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D PPA1161 translocase subunit K03210 yajC; preprotein translocase subunit YajC D PPA2350 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D PPA1333 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PPA1447 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D PPA1445 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PPA1379 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D PPA0643 conserved protein, putative twin arginine translocation complex component K03117 tatB; sec-independent protein translocase protein TatB D PPA1378 Sec-independent protein translocase protein TatC homolog K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:pac02020] D PPA0360 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D PPA0359 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D PPA0341 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D PPA0118 two-component sensor, KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PPA0119 two-component response regulator, KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PPA0115 potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D PPA0116 potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D PPA0117 potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit D PPA0649 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA1559 conserved membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA2113 putative two-component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D PPA2112 putative two-component response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D PPA2307 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D PPA1337 signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D PPA1338 putative response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D PPA0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PPA1919 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D PPA0313 putative malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PPA0888 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PPA0510 nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D PPA0509 nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D PPA0507 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D PPA0508 nitrate reductase delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D PPA0415 putative sensor histidine kinase, two-component system K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D PPA0416 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR D PPA0230 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PPA0041 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PPA0231 hypothetical protein K12510 tadB; tight adherence protein B D PPA0043 membrane associated protein K12511 tadC; tight adherence protein C D PPA0671 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0222 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PPA0176 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PPA0175 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PPA2110 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D PPA0148 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pac02024] D PPA0450 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PPA0726 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PPA0119 two-component response regulator, KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PPA0177 putative aminoacid permease K20265 gadC; glutamate:GABA antiporter D PPA1632 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA1724 putative fatty acid--CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA2234 putative long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA0222 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PPA1752 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PPA2152 putative peptide transport system secreted peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PPA2153 putative peptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein D PPA2154 putative peptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein D PPA2155 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PPA2156 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D PPA1277 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PPA2063 putative peptide-binding transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PPA1276 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PPA2064 dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D PPA2065 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PPA1275 permease protein of oligopeptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PPA2066 ATP-binding protein of dipeptide ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D PPA1274 putative ATP-binding ABC transporter protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PPA1273 dipeptide ABC transporter ATP-binding K02032 ddpF; peptide/nickel transport system ATP-binding protein D PPA2350 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D PPA0598 serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-] D PPA1892 putative SecE/Sec61-gamma subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE D PPA0819 putative SecG-like membrane spanning protein K03075 secG; preprotein translocase subunit SecG D PPA1835 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D PPA1161 translocase subunit K03210 yajC; preprotein translocase subunit YajC D PPA1333 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PPA1447 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D PPA1445 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D PPA0017 periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D PPA1032 RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PPA0545 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:pac04980] D PPA1236 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PPA0597 kinase ArgK, involved in lysine, arginine, ornithine transport K07588 MMAA; GTPase [EC:3.6.5.-] D PPA0596 methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PPA0595 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pac01501] D PPA2164 putative beta-N-acetylglucosaminidase precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PPA1645 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PPA2152 putative peptide transport system secreted peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PPA2153 putative peptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein D PPA2154 putative peptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein D PPA2155 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PPA2156 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D PPA0752 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pac01502] D PPA2338 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA1359 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA2285 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1] D PPA0754 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PPA0755 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PPA0758 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance D PPA0718 probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pac01000] C 01001 Protein kinases [BR:pac01001] D PPA0184 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D PPA0729 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D PPA1644 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D PPA2303 probable serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D PPA0360 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D PPA0118 two-component sensor, KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PPA2113 putative two-component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D PPA1337 signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D PPA0415 putative sensor histidine kinase, two-component system K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D PPA1265 sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pac01009] D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA0187 putative protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D PPA1322 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D PPA2051 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pac01002] D PPA0767 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D PPA1764 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PPA0721 putative NPL/P60 family secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D PPA1962 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D PPA1970 amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PPA1134 large subunit of NADH-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PPA1794 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PPA2151 putative intracellular protease / general stress protein 18 K05520 yhbO; deglycase [EC:3.5.1.124] D PPA0317 conserved protein, putative protease K07052 K07052; CAAX protease family protein D PPA1365 conserved protein YyaK K07052 K07052; CAAX protease family protein D PPA0470 conserved protein K07052 K07052; CAAX protease family protein D PPA1627 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PPA1979 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PPA1909 metalloprotease (peptidase family M13) K07386 pepO; putative endopeptidase [EC:3.4.24.-] D PPA0122 peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-] D PPA0694 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PPA0636 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PPA0661 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PPA1833 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PPA0650 Xaa-Pro aminopeptidase I K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PPA0260 putative cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PPA1640 hypothetical membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-] D PPA2307 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D PPA0598 serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-] D PPA1137 putative beta-lactamase class C K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D PPA0257 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PPA1572 ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PPA1573 ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PPA1310 predicted secreted protease with a PDZ domain K07177 K07177; Lon-like protease D PPA1023 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D PPA1434 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PPA0932 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PPA1570 tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-] D PPA1579 peptidase (peptidase family S51) K05995 pepE; dipeptidase E [EC:3.4.13.21] D PPA1704 peptidase S51 family protein K05995 pepE; dipeptidase E [EC:3.4.13.21] D PPA1207 20S proteasome alpha-subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PPA1206 20S proteasome beta-subunit precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PPA2114 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] C 01003 Glycosyltransferases [BR:pac01003] D PPA1222 glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D PPA0523 putative dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D PPA1824 glycosyl transferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D PPA1791 glycosyl transferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D PPA0639 putative glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D PPA1248 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PPA0681 conserved protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D PPA1769 conserved membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D PPA1698 succinoglycan biosynthesis protein ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D PPA0961 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pac01005] D PPA1248 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pac01011] D PPA1226 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PPA1894 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PPA0759 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PPA0756 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PPA0753 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PPA2338 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA1359 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PPA2285 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1] D PPA1675 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PPA0755 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PPA0758 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PPA2224 putative undecaprenol kinase (bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PPA2147 conserved membrane protein, MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase D PPA0752 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PPA0185 putative penicillin-binding protein K05364 pbpA; penicillin-binding protein A D PPA0257 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PPA1137 putative beta-lactamase class C K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D PPA0721 putative NPL/P60 family secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D PPA1962 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D PPA1180 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D PPA2175 rare lipoprotein A (RlpA) family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:pac01004] D PPA0984 malonyl CoA-acyl carrier protein malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PPA0983 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PPA0980 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PPA1815 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PPA1030 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PPA1532 enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118] D PPA1632 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA1724 putative fatty acid--CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA2234 putative long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA0724 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA2237 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PPA1360 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:pac01008] C 01006 Prenyltransferases [BR:pac01006] D PPA0732 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PPA0564 undecaprenyl pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D PPA1019 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PPA1945 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D PPA1561 conserved membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pac01007] D PPA1383 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1869 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1870 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PPA1404 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PPA1327 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PPA0384 tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PPA2128 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PPA1728 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PPA0216 putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PPA1568 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PPA0893 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PPA0181 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PPA1621 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PPA1175 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PPA1169 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PPA0949 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PPA2219 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PPA1499 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PPA1076 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PPA1178 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PPA1409 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PPA1408 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PPA0034 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA1153 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PPA0403 aminotransferase, putative 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PPA1866 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PPA1347 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PPA0967 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PPA0301 glutamate-1-semialdehyde 2,1-aminomutase, HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PPA1368 probable branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PPA0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pac00194] D PPA1238 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PPA1239 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PPA1240 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PPA1241 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PPA1242 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PPA1243 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PPA1244 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PPA1245 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pac03000] D PPA1991 oxidative stress transcriptional regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PPA1010 putative transcriptional regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D PPA0144 transcriptional regulator, DeoR-family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D PPA0014 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PPA2330 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PPA1555 MalR repressor protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D PPA0676 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D PPA0165 regulator protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PPA1996 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PPA0964 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PPA1406 tetracycline repressor protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D PPA0831 putative TetR-family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D PPA1220 putative AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PPA0579 transcriptional regulator MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D PPA2037 putative heat shock transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D PPA0948 metal uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PPA0222 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PPA1009 possible transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D PPA1635 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D PPA0485 repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D PPA1705 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PPA1610 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D PPA0620 NAD-dependent aldehyde dehydrogenases K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PPA0292 conserved protein K03488 licT; beta-glucoside operon transcriptional antiterminator D PPA1482 putative regulator of sorbitol operon K03491 licR; probable licABCH operon transcriptional regulator D PPA0220 putative regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D PPA1694 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D PPA1264 probable transcription factor WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D PPA2243 conserved protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D PPA2341 probable chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PPA1292 hypothetical protein, putative transcriptional regulator K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225] D PPA0357 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D PPA0586 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PPA1405 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PPA0915 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D PPA1507 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D PPA1763 conserved protein K03973 pspC; phage shock protein C D PPA1215 putative sugar-binding domain K05346 deoR; deoxyribonucleoside regulator D PPA2306 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D PPA0995 pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PPA1339 conserved protein, DUF179 K07735 algH; putative transcriptional regulator D PPA0766 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor D PPA1025 putative regulatory protein NrdR K07738 nrdR; transcriptional repressor NrdR D PPA0749 conserved protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pac03021] D PPA0473 DNA or RNA helicase of superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D PPA1826 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PPA1884 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PPA1883 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PPA1191 probable DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PPA1032 RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor D PPA1266 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PPA0392 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PPA1494 transcriptional termination/antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D PPA1188 putative NusB-family protein K03625 nusB; transcription antitermination protein NusB D PPA1891 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PPA0766 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor D PPA0561 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D PPA1254 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pac03019] D PPA0826 conserved protein, putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D PPA1452 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PPA1467 metal dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D PPA1014 conserved protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D PPA0730 guanyl-specific ribonuclease Sa3 precursor K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D PPA1642 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D PPA0921 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PPA0545 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PPA1471 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PPA1254 transcription termination factor Rho K03628 rho; transcription termination factor Rho D PPA2267 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PPA2040 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PPA1772 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0453 60 kDa chaperonin TCP-1/Cpn60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0343 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PPA1186 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D PPA2301 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D PPA0813 P-loop ATPase family protein K06958 rapZ; RNase adapter protein RapZ D PPA1377 superfamily II RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D PPA1029 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D PPA0155 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pac03011] D PPA0778 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PPA1521 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PPA1857 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PPA1827 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PPA1844 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PPA2230 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PPA1876 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PPA1848 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PPA1802 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PPA1865 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PPA1828 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PPA1878 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PPA1829 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PPA1849 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PPA2161 30S ribosomal protein S14-2 K02954 RP-S14; small subunit ribosomal protein S14 D PPA1472 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PPA1443 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PPA1853 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PPA2228 30S ribosomal protein S18-1 K02963 RP-S18; small subunit ribosomal protein S18 D PPA1859 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PPA0898 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PPA1889 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PPA1860 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PPA1863 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PPA1862 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PPA1850 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PPA1846 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PPA2227 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PPA1887 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PPA1890 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PPA1885 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PPA1803 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PPA1852 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PPA1842 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PPA1856 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PPA1825 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PPA1845 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PPA1435 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PPA1412 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PPA0827 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PPA1858 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PPA1861 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PPA1851 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PPA0829 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PPA2158 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PPA1855 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PPA1843 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PPA2157 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D PPA1253 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PPA2162 50S ribosomal protein L32-2 K02911 RP-L32; large subunit ribosomal protein L32 D PPA1897 50S ribosomal protein L33 type 2 K02913 RP-L33; large subunit ribosomal protein L33 D PPA2160 50S ribosomal protein L33 type 1 K02913 RP-L33; large subunit ribosomal protein L33 D PPA2353 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PPA1413 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PPA1831 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PPA0535 ribosomal L25P family protein K02897 RP-L25; large subunit ribosomal protein L25 D PPA2419 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2442 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2434 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2417 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2436 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2444 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2418 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2443 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2435 23SrRNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pac03009] D PPA1452 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PPA1642 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D PPA0939 GTP-binding protein Era homolog K03595 era; GTPase D PPA0833 GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-] D PPA0766 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor D PPA1494 transcriptional termination/antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D PPA1188 putative NusB-family protein K03625 nusB; transcription antitermination protein NusB D PPA1891 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PPA0526 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PPA1196 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PPA2050 conserved protein (putative rRNA small subunit methyltransferase) K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PPA1810 conserved protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PPA1464 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PPA0917 conserved protein DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PPA2344 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PPA0750 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PPA0524 putative tetrapyrrole (corrin/porphyrin) methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PPA1396 putative cytotoxin/hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D PPA1536 putative resistance protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D PPA0383 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PPA1514 conserved protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PPA2310 putative RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PPA1385 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D PPA0768 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PPA1783 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PPA0495 putative ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D PPA1441 probable 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D PPA1006 conserved protein, radical SAM superfamily protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D PPA0862 conserved protein DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D PPA0826 conserved protein, putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D PPA1179 predicted endonuclease involved in recombination K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PPA1269 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PPA1210 putative GTP binding protein K03977 engA; GTPase D PPA1021 GTP-binding protein K03665 hflX; GTPase D PPA1249 SUA5 related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PPA1166 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PPA1489 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D PPA1495 conserved protein K09748 rimP; ribosome maturation factor RimP D PPA0599 conserved protein K14761 rlbA; ribosome-associated protein D PPA0837 conserved protein, DUF143 domain K09710 ybeB; ribosome-associated protein D PPA0937 conserved protein K07042 ybeY; probable rRNA maturation factor D PPA0575 putative ATP/GTP binding protein K06942 ychF; ribosome-binding ATPase D PPA1453 conserved protein, predicted metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pac03016] D PPA0730 guanyl-specific ribonuclease Sa3 precursor K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D PPA1383 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1869 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1499 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PPA0216 putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PPA0893 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PPA1728 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PPA1870 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PPA2128 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PPA0181 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PPA1621 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PPA1175 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PPA1178 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PPA0949 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PPA1076 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PPA2219 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PPA0384 tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PPA1568 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PPA1169 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PPA1409 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PPA1408 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PPA1404 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PPA1327 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PPA0346 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PPA1375 putative cell-cycle regulation histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PPA1201 putative methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D PPA1808 conserved methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PPA1809 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PPA1478 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PPA1116 aminotransferase class V, putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PPA1249 SUA5 related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PPA1019 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PPA2352 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PPA1674 probable ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D PPA1063 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D PPA2262 putative transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D PPA2182 putative cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PPA1017 MiaB family protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PPA1440 tRNA (Guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PPA1410 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D PPA2310 putative RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PPA1117 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PPA0348 conserved protein, putative glycine cleavage T-protein K06980 ygfZ; tRNA-modifying protein YgfZ D PPA0924 queuine/archaeosine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PPA0258 conserved protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PPA1784 peptidase, family M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PPA1782 putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PPA1785 predicted nucleotide-binding protein (P-loop hydrolase) K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PPA1471 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pac03012] D PPA1493 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PPA1414 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PPA1520 elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D PPA1873 elongation factor Tu K02358 tuf; elongation factor Tu D PPA1875 elongation factor G K02355 fusA; elongation factor G D PPA1252 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D PPA1518 ribosome recycling factor K02838 frr; ribosome recycling factor D PPA1250 putative methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PPA0536 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PPA1832 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D PPA1187 elongation factor P K02356 efp; elongation factor P D PPA1354 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D PPA1232 peptidyl-tRNA hydrolase domain K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:pac03110] D PPA2021 ATP-dependent protease (Clp chaperone) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PPA0278 putative Clp-family ATP-binding protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D PPA1571 ATP dependent Clp protease ATP binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PPA2040 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PPA1772 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0453 60 kDa chaperonin TCP-1/Cpn60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA2038 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D PPA0916 chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ D PPA2039 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D PPA0737 18 kDa antigen 2 K13993 HSP20; HSP20 family protein D PPA0202 putative heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D PPA1773 10 kDa chaperonin K04078 groES; chaperonin GroES D PPA0260 putative cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PPA1245 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PPA0497 putative component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D PPA0598 serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-] D PPA0066 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA1820 beta-galactosidase fused to beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PPA0718 probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PPA1100 probable peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PPA0487 thiol-disulfide isomerase K03671 TXN; thioredoxin D PPA2314 thioredoxin K03671 TXN; thioredoxin D PPA1106 putative thioredoxin K05838 ybbN; putative thioredoxin D PPA0224 conserved protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:pac04131] D PPA0823 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PPA0062 glycosyl hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D PPA1459 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA0816 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PPA0364 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0809 putative phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0769 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PPA1044 permease of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:pac04121] C 03051 Proteasome [BR:pac03051] D PPA1207 20S proteasome alpha-subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PPA1206 20S proteasome beta-subunit precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PPA1382 putative DeoR-family transcriptional regulator K13572 pafB; proteasome accessory factor B D PPA1381 regulatory protein K13573 pafC; proteasome accessory factor C C 03032 DNA replication proteins [BR:pac03032] D PPA1729 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PPA1682 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D PPA0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PPA2244 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PPA0957 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PPA2229 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1637 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PPA0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PPA0897 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PPA0244 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PPA0720 DNA polymerase III epsilon subunit (3'-5' exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1727 putative DNA polymerase III epsilon subunit (exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA0204 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PPA1433 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PPA0774 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PPA1626 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PPA0010 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PPA1045 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PPA0009 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PPA1042 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PPA0241 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pac03036] D PPA1452 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA0277 conserved protein K26249 lsr2; nucleoid-associated protein Lsr2 D PPA1682 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D PPA0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PPA2134 starvation-inducible DNA-binding protein or fine tangled pili major subunit K04047 dps; starvation-inducible DNA-binding protein D PPA1220 putative AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PPA1353 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D PPA0752 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PPA1356 FtsK/SpoIIIE protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PPA0760 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D PPA0757 cell division protein FtsW K03588 ftsW; cell division protein FtsW D PPA1352 cell division protein K09811 ftsX; cell division transport system permease protein D PPA0761 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PPA0763 conserved protein DUF552 K09772 sepF; cell division inhibitor SepF D PPA2342 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D PPA1387 chromosome partitioning protein K03496 parA; chromosome partitioning protein D PPA1280 plasmid partition protein ParA K03496 parA; chromosome partitioning protein D PPA2341 probable chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PPA2344 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PPA1522 integrase/recombinase K03733 xerC; integrase/recombinase XerC D PPA1388 site-specific recombinase K04763 xerD; integrase/recombinase XerD D PPA0645 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PPA0815 conserved protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:pac03400] D PPA1428 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PPA0558 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PPA2247 putative 3-methylpurine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D PPA0300 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PPA0223 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PPA0473 DNA or RNA helicase of superfamily II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D PPA1781 putative 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PPA2032 MutT/NudIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PPA1054 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PPA1235 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PPA1451 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PPA1623 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PPA1898 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PPA2235 probable endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PPA1626 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PPA0774 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PPA0807 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D PPA0803 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D PPA0812 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D PPA1756 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1314 putative DNA helicase II homolog K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1319 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA0852 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PPA1884 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PPA1883 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PPA1826 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PPA1191 probable DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PPA0541 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PPA0569 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PPA0568 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PPA1150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PPA0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PPA0897 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PPA0244 ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PPA0720 DNA polymerase III epsilon subunit (3'-5' exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA1727 putative DNA polymerase III epsilon subunit (exonuclease) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PPA0204 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PPA2229 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1637 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1316 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PPA1315 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PPA1317 exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PPA1012 RecA protein K03553 recA; recombination protein RecA D PPA1159 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PPA1160 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PPA1158 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PPA1194 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PPA0312 putative DNA repair protein K04485 radA; DNA repair protein RadA/Sms D PPA0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D PPA1466 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PPA0944 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PPA0206 putative recombination protein RecR K06187 recR; recombination protein RecR D PPA1394 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D PPA0010 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PPA1045 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PPA0009 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PPA1042 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PPA0241 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PPA1682 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D PPA0921 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PPA1670 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PPA1023 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D PPA1651 nucleotidyltransferase/DNA polymerase involved in DNA repair (UmuC) K14161 imuB; protein ImuB D PPA1650 DNA polymerase III, alpha chain K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D PPA1013 regulatory protein RecX K03565 recX; regulatory protein D PPA1022 putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PPA0342 conserved protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D PPA1389 putative ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D PPA2121 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PPA1026 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PPA2122 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:pac03029] D PPA1493 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PPA1414 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PPA1520 elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D PPA1873 elongation factor Tu K02358 tuf; elongation factor Tu D PPA1875 elongation factor G K02355 fusA; elongation factor G D PPA0939 GTP-binding protein Era homolog K03595 era; GTPase D PPA1404 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PPA0893 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PPA1175 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PPA0949 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PPA2128 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PPA1123 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PPA1124 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PPA1122 glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PPA2229 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA1637 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D PPA2040 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PPA2039 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D PPA1772 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0453 60 kDa chaperonin TCP-1/Cpn60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA1773 10 kDa chaperonin K04078 groES; chaperonin GroES D PPA2038 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D PPA0916 chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ D PPA1116 aminotransferase class V, putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PPA0645 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PPA1561 conserved membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PPA0649 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA1559 conserved membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PPA2350 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D PPA2339 conserved membrane-associated protein K14998 SURF1; surfeit locus 1 family protein B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pac02000] D PPA2082 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D PPA0179 ABC-type transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D PPA0178 putative ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D PPA0784 ABC-type transport system, fused ATPase and permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PPA2078 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PPA0173 transport ATP-binding protein, CydCD K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D PPA0174 transport ATP-binding protein, CydCD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D PPA0098 ABC transporter K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D PPA0682 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D PPA0099 ABC transporter K02021 ABC.MR; putative ABC transport system ATP-binding protein D PPA0504 putative molybdate-binding protein precursor K02020 modA; molybdate transport system substrate-binding protein D PPA0505 ABC transporter, putative molybdenum transport system K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PPA1475 substrate binding component of glycine/betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D PPA2017 periplasmic binding protein of proline/glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D PPA1476 glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein D PPA1477 putative glycine betaine/proline ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D PPA0404 putative substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D PPA0405 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein D PPA0406 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein D PPA0407 putative ABC transporter ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PPA0395 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PPA1552 putative periplasmic maltose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PPA1553 maltose transport system permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PPA1554 maltose transport system permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PPA2058 putative secreted sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D PPA2060 binding-protein-dependent transport system permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D PPA1966 bacterial extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D PPA1965 binding-protein-dependent transport permease K17316 gtsB; glucose/mannose transport system permease protein D PPA1964 binding-protein-dependent transport permease K17317 gtsC; glucose/mannose transport system permease protein D PPA1657 binding-protein-dependent transport system inner membrane component K10237 thuF; trehalose/maltose transport system permease protein D PPA1658 binding-protein-dependent transport system inner membrane component K10238 thuG; trehalose/maltose transport system permease protein D PPA0085 periplasmic protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein D PPA0086 putative permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein D PPA0087 permease protein K10202 ngcG; N-acetylglucosamine transport system permease protein D PPA0059 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein D PPA0058 transport permease K10241 cebF; cellobiose transport system permease protein D PPA0057 sugar transport permease BglB K10242 cebG; cellobiose transport system permease protein D PPA0604 conserved protein, putative sugar binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D PPA1454 solute-binding protein of transport system K17244 chiE; putative chitobiose transport system substrate-binding protein D PPA0605 putative sugar transport protein K17245 chiF; putative chitobiose transport system permease protein D PPA2403 hypothetical protein K17245 chiF; putative chitobiose transport system permease protein D PPA1455 transport system permease K17245 chiF; putative chitobiose transport system permease protein D PPA0606 putative transport system permease protein K17246 chiG; putative chitobiose transport system permease protein D PPA1456 transport system permease K17246 chiG; putative chitobiose transport system permease protein D PPA0017 periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D PPA0016 ribose ABC transporter K10440 rbsC; ribose transport system permease protein D PPA0015 ABC transporter protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PPA1734 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D PPA1732 ABC transporter associated permease K23535 nupB; general nucleoside transport system permease protein D PPA1731 ABC transporter associated permease K23536 nupC; general nucleoside transport system permease protein D PPA1733 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D PPA0956 conserved protein K02069 STAR2; UDP-glucose/iron transport system permease protein D PPA1961 sugar-binding periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PPA0398 conserved protein, putative sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PPA2295 solute-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PPA1959 binding-protein-dependent transport permease K02025 ABC.MS.P; multiple sugar transport system permease protein D PPA0399 sugar ABC transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D PPA2294 binding-protein-dependent transport system K02025 ABC.MS.P; multiple sugar transport system permease protein D PPA2059 binding-protein-dependent transport system permease K02025 ABC.MS.P; multiple sugar transport system permease protein D PPA1960 binding-protein-dependent transport permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D PPA0400 putative transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D PPA2293 binding-protein-dependent transport system K02026 ABC.MS.P1; multiple sugar transport system permease protein D PPA0341 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D PPA0340 putative phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D PPA0339 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D PPA0338 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PPA1758 outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D PPA1760 ABC transporter associated permease K02072 metI; D-methionine transport system permease protein D PPA1759 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D PPA0601 ABC-type transporter, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D PPA0600 ABC-transporter, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PPA2152 putative peptide transport system secreted peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PPA2153 putative peptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein D PPA2154 putative peptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein D PPA2155 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PPA2156 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D PPA1840 extracellular solute-binding transport protein, putative oligopeptide-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D PPA1277 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PPA2063 putative peptide-binding transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PPA1276 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PPA2064 dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D PPA2065 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PPA1275 permease protein of oligopeptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PPA2066 ATP-binding protein of dipeptide ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D PPA1274 putative ATP-binding ABC transporter protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PPA1273 dipeptide ABC transporter ATP-binding K02032 ddpF; peptide/nickel transport system ATP-binding protein D PPA0780 hemin receptor precursor K25132 hmuT; heme transport system substrate-binding protein D PPA0781 ABC-type transporter, permease component K25133 hmuU; heme transport system permease protein D PPA0782 ABC-type transporter, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D PPA0076 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PPA0656 iron transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PPA1780 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PPA0794 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PPA0427 putative iron transport lipoprotein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PPA0334 putative ABC-type transporter, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PPA0077 ABC transporter K02015 ABC.FEV.P; iron complex transport system permease protein D PPA0657 iron transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D PPA1779 Fe(III) dicitrate ABC transporter, permease K02015 ABC.FEV.P; iron complex transport system permease protein D PPA0793 iron(III) dicitrate transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D PPA0425 FecCD-family membrane transport protein K02015 ABC.FEV.P; iron complex transport system permease protein D PPA0336 putative permease, FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein D PPA0078 permease K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA0658 ABC transporter, nucleotide binding/ATPase protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA1778 Fe(III) dicitrate ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA0426 Fe uptake system permease K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA0335 ABC-type transporter, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA1530 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA0792 iron(III) dicitrate transport system permease protein FecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PPA0107 periplasmic-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D PPA0106 periplasmic-binding protein of ABC transporter K25034 btuF; cobalamin transport system substrate-binding protein D PPA0105 transporter (putative iron (III) permease) K25027 btuC; cobalamin transport system permease protein D PPA0104 ABC transporter K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D PPA1504 ABC transporter ATP-binding protein K09819 ABC.MN.P; manganese/iron transport system permease protein D PPA1503 ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D PPA0432 putative cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D PPA0433 cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D PPA0430 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D PPA0434 membrane associated cobalt transport protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PPA1400 BioY family protein K03523 bioY; biotin transport system substrate-specific component D PPA1398 cobalt permease or related transporter K16783 bioN; biotin transport system permease protein D PPA1399 ABC-type transporter, ATPase component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D PPA2083 putative permease K16926 htsT; energy-coupling factor transport system substrate-specific component D PPA1814 putative ABC transporter-associated permease K16927 cbrT; energy-coupling factor transport system substrate-specific component D PPA1812 ABC transporter-associated permease K16785 ecfT; energy-coupling factor transport system permease protein D PPA2085 ABC transporter associated permease (putative cobalt transport system) K16785 ecfT; energy-coupling factor transport system permease protein D PPA1813 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PPA2084 ABC transporter ATP-binding protein (putative cobalt transport system) K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PPA0157 ABC transporter K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-] D PPA0156 putative ABC-type transporter, permease component K16925 ykoE; energy-coupling factor transport system permease protein D PPA0617 solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D PPA0615 ABC-type transporter, permease components K02075 ABC.ZM.P; zinc/manganese transport system permease protein D PPA0616 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D PPA1352 cell division protein K09811 ftsX; cell division transport system permease protein D PPA1353 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D PPA0413 putative permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PPA1816 ABC transporter associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PPA2207 putative ABC transporter-associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PPA1558 putative ABC transporter-associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PPA0928 conserved protein, putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D PPA2091 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA1817 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA1915 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA0213 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA0927 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA0412 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA1557 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA0170 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA1492 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA1942 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PPA2031 ABC transporter associated permease K02004 ABC.CD.P; putative ABC transport system permease protein D PPA0053 ABC transporter associated permease K02004 ABC.CD.P; putative ABC transport system permease protein D PPA0209 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein D PPA0704 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D PPA2030 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA0054 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA0074 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA0612 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA0705 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA1790 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA0208 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PPA1546 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D PPA1527 transporter, sodium/bile acid symporter family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PPA2259 conserved membrane protein, MatE domain K26937 dinF; MATE family, multidrug efflux pump D PPA0987 galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D PPA0488 sugar transporter family protein K06609 iolT; MFS transporter, SP family, major inositol transporter D PPA0467 putative sugar transporter YfiG K06609 iolT; MFS transporter, SP family, major inositol transporter D PPA1213 L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D PPA2120 dicarboxylate transport protein / putative alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D PPA0634 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D PPA1089 putative oxalate/formate-specific permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D PPA0686 sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter D PPA2000 putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter D PPA0511 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D PPA1284 conserved protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D PPA1233 putative multidrug-efflux transporter protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D PPA1837 conserved membrane protein, putative permease K26602 yihN; MFS transporter, GlpU family, inner membrane protein D PPA1044 permease of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family D PPA1822 organic anion transporter family protein K08368 yaaU; MFS transporter, putative metabolite transport protein D PPA0884 sugar transporter, permease protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D PPA0351 putative phosphoenolpyruvate-protein kinase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PPA0141 hypothetical protein K02784 ptsH; phosphocarrier protein HPr D PPA0352 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D PPA1487 PTS HPr component K02784 ptsH; phosphocarrier protein HPr D PPA0293 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0679 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PPA0294 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PPA0675 PTS system, glucose-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PPA0678 PTS system, glucose-specific IIAB fragment K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193] D PPA0677 PTS system, glucose-specific IIB component K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193] D PPA1142 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PPA1109 phosphoenolpyruvate sugar phosphotransferase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PPA2232 PTS system, fructose/mannitol specific IIA subunit K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PPA0142 phosphotransferase system K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PPA0919 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D PPA1149 PTS cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PPA1147 PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PPA1148 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D PPA1486 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PPA0355 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PPA1485 PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D PPA1484 PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component D PPA0021 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D PPA0365 putative PTS system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D PPA0023 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0356 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0366 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D PPA0022 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D PPA0447 phosphotransferase system protein, mannitol/fructose-specific IIA subunit K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PPA0446 putative sugar-specific permease K03475 ulaA; ascorbate PTS system EIIC component D PPA1949 PTS protein, putative dihydroxyacetone kinase phosphotransfer protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D PPA2305 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D PPA1165 ion channel membrane protein K10716 kch; voltage-gated potassium channel D PPA0977 conserved protein, putative BatA (bacteroides aerotolerance operon) K07114 yfbK; Ca-activated chloride channel homolog D PPA0976 conserved protein, putative BatA (bacteroides aerotolerance operon) K07114 yfbK; Ca-activated chloride channel homolog D PPA0491 large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D PPA2298 conserved protein, putative mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D PPA1716 putative magnesium transport protein K03284 corA; magnesium transporter D PPA0770 CrcB-like protein K06199 crcB; fluoride exporter D PPA0771 CrcB homolog K06199 crcB; fluoride exporter D PPA1736 conserved protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PPA0938 conserved protein, putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D PPA0263 putative outer membrane protein A K16191 K16191; peptidoglycan-binding protein ArfA D PPA0591 lysine-specific permease K11733 lysP; lysine-specific permease D PPA1643 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D PPA1326 L-asparagine permease K11738 ansP; L-asparagine permease D PPA0368 amino acid permease K11738 ansP; L-asparagine permease D PPA0582 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D PPA0177 putative aminoacid permease K20265 gadC; glutamate:GABA antiporter D PPA1228 cation-efflux transport protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D PPA0923 conserved membrane spanning protein, DUF6 family K11939 rhtA; inner membrane transporter RhtA D PPA0738 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D PPA0095 C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D PPA1043 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D PPA0166 putative L-lactate permease K03303 lutP; lactate permease D PPA0227 putative sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D PPA2179 putative Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D PPA1057 Trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D PPA1058 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D PPA0480 putative xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease D PPA0218 putative transport protein K26604 cyuP; cysteine uptake transport protein D PPA0080 chloride channel protein K03281 clcA; chloride channel protein, CIC family D PPA2253 putative chloride channel K03281 clcA; chloride channel protein, CIC family D PPA2026 manganese transport protein K03322 mntH; manganese transport protein D PPA2147 conserved membrane protein, MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase D PPA2187 K+ potassium transporter K03549 kup; KUP system potassium uptake protein D PPA0931 conserved protein, DUF165 family K09125 yhhQ; queuosine precursor transporter D PPA0892 conserved mebrane associated protein, DUF125 K22736 VIT; vacuolar iron transporter family protein D PPA0757 cell division protein FtsW K03588 ftsW; cell division protein FtsW D PPA1556 inorganic H+ pyrophosphatase (vacuolar-type) K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D PPA0326 cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D PPA0510 nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D PPA0509 nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D PPA0507 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D PPA0517 anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D PPA0516 anaerobic dimethyl sulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D PPA1419 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D PPA1676 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D PPA1677 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D PPA0146 hypothetical protein K18814 ictB; putative inorganic carbon (hco3(-)) transporter C 02044 Secretion system [BR:pac02044] D PPA0230 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PPA0041 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PPA0231 hypothetical protein K12510 tadB; tight adherence protein B D PPA0043 membrane associated protein K12511 tadC; tight adherence protein C D PPA0267 hypothetical protein K02221 yggT; YggT family protein D PPA0764 conserved protein K02221 yggT; YggT family protein D PPA0894 ComE operon protein 1 K02237 comEA; competence protein ComEA D PPA1950 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PPA0895 putative ComE operon protein 3 K02238 comEC; competence protein ComEC D PPA1333 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PPA1162 translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PPA1892 putative SecE/Sec61-gamma subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE D PPA1163 translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PPA0819 putative SecG-like membrane spanning protein K03075 secG; preprotein translocase subunit SecG D PPA1835 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D PPA1445 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PPA1447 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D PPA1161 translocase subunit K03210 yajC; preprotein translocase subunit YajC D PPA2350 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D PPA1379 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D PPA0643 conserved protein, putative twin arginine translocation complex component K03117 tatB; sec-independent protein translocase protein TatB D PPA1378 Sec-independent protein translocase protein TatC homolog K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pac02042] D PPA1736 conserved protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PPA0938 conserved protein, putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D PPA0687 CAMP factor K11045 cfa; cAMP factor D PPA1198 CAMP factor K11045 cfa; cAMP factor D PPA1231 CAMP factor K11045 cfa; cAMP factor D PPA1340 CAMP factor K11045 cfa; cAMP factor D PPA2108 CAMP factor K11045 cfa; cAMP factor D PPA0565 conserved protein family (Hly-III / UPF0073), putative hemolysin K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:pac02022] D PPA0360 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D PPA0359 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D PPA0118 two-component sensor, KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PPA0119 two-component response regulator, KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PPA2113 putative two-component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D PPA2112 putative two-component response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D PPA1337 signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D PPA1338 putative response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D PPA2043 putative two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D PPA0415 putative sensor histidine kinase, two-component system K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D PPA0416 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR D PPA1265 sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D PPA0772 putative two-component system response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:pac02035] D PPA0230 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PPA0041 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pac04812] D PPA0761 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PPA2342 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D PPA1387 chromosome partitioning protein K03496 parA; chromosome partitioning protein D PPA1280 plasmid partition protein ParA K03496 parA; chromosome partitioning protein D PPA2341 probable chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pac04147] D PPA2024 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PPA0545 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PPA0816 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PPA0817 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PPA0769 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PPA0718 probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PPA1772 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA0453 60 kDa chaperonin TCP-1/Cpn60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PPA2040 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PPA2131 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PPA1767 IMP dehydrogenase / GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PPA1768 IMP dehydrogenase / GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PPA1873 elongation factor Tu K02358 tuf; elongation factor Tu D PPA1375 putative cell-cycle regulation histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PPA0887 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA0012 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1952 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PPA1527 transporter, sodium/bile acid symporter family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PPA1632 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA1724 putative fatty acid--CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA2234 putative long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PPA1834 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PPA1164 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PPA1346 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PPA2201 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PPA0607 glycosyl hydrolase, putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PPA2070 alpha-L-fucosidase precursor K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PPA2192 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PPA2287 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PPA1111 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PPA2304 glycerol kinase 2 K00864 glpK; glycerol kinase [EC:2.7.1.30] D PPA0671 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PPA0302 delta-aminolevulinic acid dehydratase, HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PPA1272 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PPA1747 Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PPA1227 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein) K03522 fixB; electron transfer flavoprotein alpha subunit D PPA1563 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PPA0818 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PPA0364 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PPA0809 putative phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:pac02048] D PPA1612 putative type III restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5] D PPA1611 putative type III restriction-modification system K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D PPA1592 phage associated protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D PPA1763 conserved protein K03973 pspC; phage shock protein C D PPA1602 hypothetical protein K03970 pspB; phage shock protein B D PPA2075 conserved protein (putative plasmid stability protein) K21495 fitA; antitoxin FitA D PPA0761 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PPA1383 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1869 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PPA1116 aminotransferase class V, putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:pac04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pac04090] C 01504 Antimicrobial resistance genes [BR:pac01504] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pac03100] D PPA2409 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PPA2421 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PPA2414 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PPA2429 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2459 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2413 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2440 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PPA2422 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PPA2453 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PPA2425 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PPA2433 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PPA2415 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PPA2432 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PPA2452 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PPA2426 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PPA2438 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PPA2455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PPA2441 tRNA-His K14226 tRNA-His; tRNA His D PPA2408 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PPA2446 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2437 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2456 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2416 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PPA2451 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PPA2445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PPA2423 tRNA-Met K14230 tRNA-Met; tRNA Met D PPA2430 tRNA-Met K14230 tRNA-Met; tRNA Met D PPA2448 tRNA-Met K14230 tRNA-Met; tRNA Met D PPA2454 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PPA2457 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PPA2428 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PPA2439 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PPA2458 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2460 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2461 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PPA2449 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PPA2411 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PPA2412 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PPA2447 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PPA2450 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PPA2427 tRNA-Val K14237 tRNA-Val; tRNA Val D PPA2424 tRNA-Val K14237 tRNA-Val; tRNA Val D PPA2431 tRNA-Val K14237 tRNA-Val; tRNA Val D PPA2417 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2436 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2444 16SrRNA K01977 16SrRNA; 16S ribosomal RNA D PPA2418 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2443 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2435 23SrRNA K01980 23SrRNA; 23S ribosomal RNA D PPA2419 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2442 5SrRNA K01985 5SrRNA; 5S ribosomal RNA D PPA2434 5SrRNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PPA2129 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D PPA0296 4-hydroxythreonine-4-phosphate dehydrogenase 2 K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D PPA0994 putative oxidoreductase protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D PPA1938 putative electron transfer oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D PPA2212 putative electron transfer flavoprotein-quinone oxidoreductase (FixC protein) K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D PPA1721 dihydrolipoamide dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PPA2245 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PPA0333 pyridine nucleotide-disulphide oxidoreductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D PPA1990 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D PPA0556 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PPA1065 peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PPA1661 putative peroxiredoxin (AhpC/TSA family protein) K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PPA0590 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PPA1989 alkyl hydroperoxide reductase C22 protein K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D PPA0580 stress-induced protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D PPA2225 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D PPA2136 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PPA2277 hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263] D PPA2278 putative threonine synthase / cystathionine beta-synthase K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263] D PPA1221 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D PPA0624 N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D PPA2221 leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D PPA0083 hypothetical protein K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211] D PPA0673 putative glycosyl transferases group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D PPA0147 putative glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D PPA1133 putative prolipoprotein diacyleglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PPA0298 conserved protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D PPA2049 conserved protein (DUF299) K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D PPA0666 glutamate-ammonia-ligase adenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D PPA0311 conserved protein K07067 disA; diadenylate cyclase [EC:2.7.7.85] D PPA2215 putative L-carnitine dehydratase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D PPA0879 putative phosphotriesterase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104] D PPA0410 conserved protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D PPA1631 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PPA0838 phosphoglycerate mutase/fructose-2,6-bisphosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D PPA1328 predicted metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D PPA0252 conserved protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D PPA0525 DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PPA1102 putative nuclease of the RecB family K07503 nucS; endonuclease [EC:3.1.-.-] D PPA1569 conserved protein (sialidase-like protein) K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97] D PPA0644 endoglycoceramidase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123] D PPA2106 endoglycoceramidase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123] D PPA1525 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PPA2143 hypothetical protein (polysaccharide deacetylase / xylanase) K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D PPA2146 hypothetical protein (polysaccharide deacetylase) K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D PPA0748 magnesium chelatase, subunit ChlI K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PPA0974 MoxR-like ATPases K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PPA0109 myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D PPA1792 conserved protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PPA0380 hyalorunate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1] D PPA2163 FK506-binding protein/peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D PPA2015 hypothetical membrane-spanning protein K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] C 99981 Carbohydrate metabolism D PPA0465 myo-inositol catabolism IolH protein K06605 iolH; myo-inositol catabolism protein IolH D PPA0167 conserved protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D PPA0168 putative iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D PPA0169 conserved protein DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D PPA1544 conserved protein K04488 iscU; nitrogen fixation protein NifU and related proteins D PPA2214 putative electron transfer flavoprotein (FixA protein) K03521 fixA; electron transfer flavoprotein beta subunit D PPA1981 pyridine nucleotide-disulphide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D PPA0978 conserved protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D PPA2239 conserved protein K21688 rpfB; resuscitation-promoting factor RpfB C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D PPA0245 hypothetical protein K15977 K15977; putative oxidoreductase D PPA0920 conserved protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D PPA1483 sorbitol operon activator K02466 gutM; glucitol operon activator protein D PPA0477 cold shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D PPA1680 conserved protein (DUF174) K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D PPA1575 trigger factor (chaperone in protein export) K03545 tig; trigger factor D PPA1351 SsrA-binding protein K03664 smpB; SsrA-binding protein D PPA1430 competence related protein (magnesium chelatase, ATPase) K07391 comM; magnesium chelatase family protein D PPA2313 conserved OsmC-like protein K07397 yhfA; putative redox protein D PPA0327 conserved protein, putative c-type cytochrome biogenesis protein K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D PPA0573 DNA recombination protein RmuC homolog K09760 rmuC; DNA recombination protein RmuC D PPA0851 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D PPA1431 putative endonuclease K07460 yraN; putative endonuclease D PPA1429 DNA processing / uptake protein K04096 smf; DNA processing protein D PPA1176 uncharacterized ATPase related to the helicase subunit of the holliday junction resolvase K07478 ycaJ; putative ATPase D PPA1596 phage-associated protein K06919 K06919; putative DNA primase/helicase D PPA2104 transposase fragment K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D PPA0698 phage shock protein A K03969 pspA; phage shock protein A D PPA0205 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PPA2331 glucuronide permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PPA2033 aromatic amino acid transport permease AroP K03293 TC.AAT; amino acid transporter, AAT family D PPA2269 D-serine/D-alanine/glycine transporter K03293 TC.AAT; amino acid transporter, AAT family D PPA2254 amino acid permease, putative GABA permease K03293 TC.AAT; amino acid transporter, AAT family D PPA1069 aromatic amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D PPA2283 D-serine/D-alanine/glycine transporter K03293 TC.AAT; amino acid transporter, AAT family D PPA2284 D-serine/D-alanine/glycine transporter K03293 TC.AAT; amino acid transporter, AAT family D PPA0138 dipeptide/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PPA2042 putative low-affinity phosphate transport protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D PPA2193 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PPA0557 sodium-and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PPA1770 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PPA2022 branched-chain amino acid transport permease K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D PPA0619 transport-protein, putative permease for cytosine/purines K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PPA2211 purine cytosine permease-like protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PPA2034 conserved membrane protein (putative permease) K07085 K07085; putative transport protein C 99978 Cell growth D PPA2349 JAG-like protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D PPA0660 carbon starvation protein A K06200 cstA; carbon starvation protein D PPA2003 GTPase K06207 typA; GTP-binding protein D PPA0936 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PPA0566 ATP-binding protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D PPA1662 lysozyme M1 precursor K07273 acm; lysozyme D PPA1574 conserved membrane protein, UPF0118 K11744 tqsA; AI-2 transport protein TqsA C 99994 Others D PPA0361 putative phosphate transport system protein K02039 phoU; phosphate transport system protein D PPA0471 putative copper homeostasis protein CutC K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D PPA1539 acetyltransferase family protein K02348 elaA; ElaA protein D PPA0237 putative helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D PPA0071 putative membrane transport protein K06994 K06994; putative drug exporter of the RND superfamily D PPA1953 patatin-like phospholipase K07001 K07001; NTE family protein D PPA1549 conserved protein, UPF0051 K09014 sufB; Fe-S cluster assembly protein SufB D PPA1548 conserved protein, UPF0051 K09015 sufD; Fe-S cluster assembly protein SufD D PPA1088 putative tRNA-processing ribonuclease K07058 K07058; membrane protein D PPA2014 conserved membrane protein (DedA family) K03975 dedA; membrane-associated protein D PPA0674 conserved protein DedA family K03975 dedA; membrane-associated protein D PPA1203 conserved membrane spanning protein YhgE K01421 yhgE; putative membrane protein D PPA0072 membrane associated protein K01421 yhgE; putative membrane protein D PPA0680 conserved protein K08996 yagU; putative membrane protein D PPA2018 putative preprotein translocase subunit K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D PPA0103 conserved radical SAM superfamily protein K06871 K06871; uncharacterized protein D PPA0563 conserved protein containing thioredoxin domain K06888 K06888; uncharacterized protein D PPA1442 putative RNA-binding protein K06960 K06960; uncharacterized protein D PPA0096 conserved protein K06975 K06975; uncharacterized protein D PPA1505 acetyltransferase family protein K06976 K06976; uncharacterized protein D PPA1465 conserved protein K07005 K07005; uncharacterized protein D PPA2188 glutamine amidotransferase / GMP synthase K07065 K07065; uncharacterized protein D PPA0286 conserved protein, putative cell division inhibitor K07071 K07071; uncharacterized protein D PPA2145 conserved mebrane protein, predicted permease K07089 K07089; uncharacterized protein D PPA1497 conserved membrane protein K07090 K07090; uncharacterized protein D PPA2150 calcineurin-like phosphoesterase K07098 K07098; uncharacterized protein D PPA0623 putative purine phosphoribosyltransferase K07101 K07101; uncharacterized protein D PPA2236 short chain dehydrogenase K07124 K07124; uncharacterized protein D PPA0330 putative short chain dehydrogenase K07124 K07124; uncharacterized protein D PPA0428 ATPase of the AAA superfamily K07133 K07133; uncharacterized protein D PPA0651 conserved protein DUF164 K07164 K07164; uncharacterized protein D PPA2351 conserved protein K08998 K08998; uncharacterized protein D PPA1086 uncharacterized conserved protein K08999 K08999; uncharacterized protein D PPA0547 conserved protein K09009 K09009; uncharacterized protein D PPA0065 conserved hypothetical protein K09704 K09704; uncharacterized protein D PPA2117 conserved protein K09780 K09780; uncharacterized protein D PPA1689 conserved protein K09791 K09791; uncharacterized protein D PPA0376 putative glycosyl hydrolase K09992 K09992; uncharacterized protein D PPA2046 hypothetical protein K09992 K09992; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024