+E	Replication protein	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; DNA Replication Proteins - Pediococcus pentosaceus ATCC 25745</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  DNA Replication Initiation Factors
C    pre-RC (pre-replication complex)
C    CDK (cyclin dependent kinase)
C    DDK (Dbf-4 dependent kinase)
C    GINS complex
C    Other initiation factors
B  DNA Replication Elongation Factors
C    DNA polymerase alpha / primase complex
C    DNA polymerase epsilon complex
C    DNA polymerase delta complex
C    DNA polymerase gamma complex (mitochondrial)
C    RPA (replication protein A)
C    RFC (replication factor C)
C    RNase H
D      PEPE_0304 RNase HI	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
C    Other elongation factors
B  DNA Replication Termination Factors
C    DNA methylation enzymes
D      PEPE_0532 Site-specific DNA methylase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
C    Prevention of re-replication factors
C    Telomere proteins
D      Shelterin complex
D      TERB1-TERB2-MAJIN complex
D      CST complex (animals)
D      CST complex (yeast)
D      RIF proteins
D      SIR proteins
C    Telomerase complex (animals)
D      Dyskerin complex
C    Telomerase complex (fungi)
D      Sm core complex
C    ELG1-RFC complex
C    MRN complex
C    Other termination factors
B  DNA Topoisomerases
#
A<b>Prokaryotic type</b>
B  DNA Replication Initiation Factors
C    Initiation factors (bacterial)
D      PEPE_1077 bacterial nucleoid protein Hbs	K03530 hupB; DNA-binding protein HU-beta 
D      PEPE_0001 DNA replication ATPase initiation	K02313 dnaA; chromosomal replication initiator protein 
D      PEPE_0012 primary replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] 
D      PEPE_0760 Replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] 
D      PEPE_1018 DNA replication protein	K02315 dnaC; DNA replication protein DnaC 
D      PEPE_1100 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101] 
D      PEPE_0692 replicative DNA helicase loader DnaB	K03346 dnaB; replication initiation and membrane attachment protein 
D      PEPE_0693 replicative DNA helicase loader DnaI	K11144 dnaI; primosomal protein DnaI 
D      PEPE_0008 single-strand binding protein	K03111 ssb; single-strand DNA-binding protein 
D      PEPE_0758 single-strand binding protein	K03111 ssb; single-strand DNA-binding protein 
D      PEPE_1021 Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein 
C    Initiation factors (archaeal)
B  DNA Replication Elongation Factors
C    Elongation factors (bacterial)
D      DNA polymerase III holoenzyme
E        PEPE_1094 DNA polymerase III catalytic subunit, DnaE type	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] 
E        PEPE_0885 DNA polymerase III catalytic subunit, PolC type	K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] 
E        PEPE_0002 DNA polymerase III, beta subunit	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] 
E        PEPE_1148 DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] 
E        PEPE_1479 DNA polymerase III, delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] 
E        PEPE_0472 DNA polymerase III, epsilon subunit related 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        PEPE_1484 DNA polymerase III, gamma/tau subunit	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] 
D      RNase H
E        PEPE_0304 RNase HI	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        PEPE_0971 Ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      Other elongation factors
E        PEPE_0688 DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7] 
E        PEPE_1612 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
C    Elongation factors (archaeal)
D      B-family DNA polymerases
D      D-family DNA polymerases
D      RNase H
E        PEPE_0304 RNase HI	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        PEPE_0971 Ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      RFC (replication factor C)
D      Other elongation factors
B  DNA Replication Termination Factors
C    Terminus site-binding protein
C    DNA methylation enzymes
C    Prevention of re-replication factors
B  DNA Topoisomerases
C    PEPE_0006 DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] 
C    PEPE_0005 DNA gyrase subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] 
C    PEPE_0958 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
C    PEPE_0959 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
C    PEPE_0965 DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: November 2, 2022