+D GENES KO
#
KEGG Orthology (KO) - Pseudomonas sp. UW4
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ppuu00010]
D PputUW4_04261 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PputUW4_04634 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PputUW4_00292 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PputUW4_05061 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PputUW4_00702 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PputUW4_04263 gap2; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_03509 gap1; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_05064 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PputUW4_00276 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PputUW4_01108 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PputUW4_04336 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03823 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03653 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PputUW4_00395 aceE1; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_04151 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_00394 aceF1; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_04150 aceF2; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_03046 zinc-containing alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D PputUW4_02943 quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02942 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_04800 aldA; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_02572 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PputUW4_02935 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_05367 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PputUW4_02313 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D PputUW4_00211 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ppuu00020]
D PputUW4_03806 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PputUW4_03534 acnA1; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PputUW4_02915 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PputUW4_01821 icd1; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PputUW4_01822 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PputUW4_03801 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PputUW4_03800 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03797 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PputUW4_03798 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PputUW4_00103 cat1; succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PputUW4_03803 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PputUW4_03802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PputUW4_03805 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PputUW4_03804 sdhD; succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PputUW4_04340 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PputUW4_01343 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PputUW4_02058 mqo1; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PputUW4_04558 mqo2; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PputUW4_05384 pycA; pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D PputUW4_05383 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PputUW4_00211 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PputUW4_00395 aceE1; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_04151 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_00394 aceF1; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_04150 aceF2; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ppuu00030]
D PputUW4_04634 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PputUW4_02479 zwf1; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PputUW4_04250 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PputUW4_04249 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PputUW4_02856 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PputUW4_02478 gnd; 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PputUW4_04923 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PputUW4_02103 tktB; transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_02104 tktA; transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_05066 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_03492 tal; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PputUW4_05177 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PputUW4_03398 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_03830 phnN; phosphorous compounds metabolism-related ATP-binding protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D PputUW4_04582 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PputUW4_04262 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D PputUW4_04248 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PputUW4_02313 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D PputUW4_01803 hypothetical protein K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D PputUW4_00989 gdhA; quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D PputUW4_03011 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PputUW4_00843 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PputUW4_02432 kdgK; 2-dehydro-3-deoxygluconokinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13]
D PputUW4_02430 gluconate 2-dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D PputUW4_04225 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PputUW4_03822 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_00805 trxB1; thioredoxin reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9]
D PputUW4_05061 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PputUW4_00292 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:ppuu00040]
D PputUW4_01987 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_02777 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_02411 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PputUW4_04923 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PputUW4_02858 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03991 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03183 aldH; aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03029 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_00753 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_01242 class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PputUW4_01809 Class II Aldolase/Adducin Family Protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:ppuu00051]
D PputUW4_02513 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PputUW4_03365 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PputUW4_04482 algA; bifunctional protein mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_01528 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_01529 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PputUW4_01242 class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PputUW4_01809 Class II Aldolase/Adducin Family Protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PputUW4_01931 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D PputUW4_02149 fumarylacetoacetate (FAA) hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D PputUW4_03424 L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D PputUW4_00292 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PputUW4_00720 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PputUW4_04471 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D PputUW4_04472 alg8; alginate biosynthesis protein Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D PputUW4_04473 alg44; alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D PputUW4_04476 algG; alginate biosynthesis protein AlgG K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37]
D PputUW4_04478 algL; alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D PputUW4_05061 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PputUW4_00702 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PputUW4_01530 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D PputUW4_00721 fruA; PTS system fructose-specific transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PputUW4_01920 phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:ppuu00052]
D PputUW4_02935 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PputUW4_04841 galE2; NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PputUW4_02411 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_04261 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PputUW4_01316 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D PputUW4_01314 2-keto-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D PputUW4_01315 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D PputUW4_03371 cscA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:ppuu00053]
D PputUW4_01987 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_02777 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_03011 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PputUW4_01931 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D PputUW4_01986 UDP-glucuronate 5 -epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PputUW4_03050 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_01637 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D PputUW4_02861 ilvD2; dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D PputUW4_03993 L-rhamnonate dehydratase K25260 lxyD; L-lyxonate dehydratase [EC:4.2.1.176]
D PputUW4_02858 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03991 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03183 aldH; aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03029 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_00752 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D PputUW4_00755 garD; D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D PputUW4_02933 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:ppuu00500]
D PputUW4_03371 cscA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PputUW4_02411 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PputUW4_01227 glycoside hydrolase family protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PputUW4_03903 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PputUW4_02789 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PputUW4_02799 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PputUW4_00289 glgP; glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PputUW4_02800 treS; trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D PputUW4_02791 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PputUW4_02801 glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PputUW4_02794 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D PputUW4_02792 treY; malto-oligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D PputUW4_02790 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_04261 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PputUW4_04634 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PputUW4_02513 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PputUW4_03365 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppuu00520]
D PputUW4_03514 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PputUW4_00966 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PputUW4_00969 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PputUW4_02513 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PputUW4_03365 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PputUW4_05423 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PputUW4_00968 sugar isomerase (SIS) domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PputUW4_00701 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PputUW4_05425 glmU; bifunctional protein glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PputUW4_04903 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PputUW4_01354 gph1; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D PputUW4_03143 phosphotransferase family protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PputUW4_04934 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PputUW4_04933 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PputUW4_00789 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PputUW4_04047 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PputUW4_01377 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PputUW4_01376 capD1; polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PputUW4_03892 GCN5-related N-acetyltransferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D PputUW4_03893 pseF; acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D PputUW4_04261 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_02411 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PputUW4_01987 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_02777 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_04841 galE2; NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PputUW4_01986 UDP-glucuronate 5 -epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PputUW4_03050 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PputUW4_04634 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PputUW4_04482 algA; bifunctional protein mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_01528 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_01529 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PputUW4_01530 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D PputUW4_03899 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D PputUW4_04471 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D PputUW4_03903 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PputUW4_03902 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PputUW4_05247 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:ppuu00620]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_00395 aceE1; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_04151 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_00394 aceF1; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_04150 aceF2; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_01661 mhpF; acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_03046 zinc-containing alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D PputUW4_02943 quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D PputUW4_00798 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PputUW4_04336 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03823 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_01104 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PputUW4_00553 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PputUW4_00552 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PputUW4_03441 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02942 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_04800 aldA; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_02572 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PputUW4_00103 cat1; succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PputUW4_02750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PputUW4_04113 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PputUW4_00676 D-lactate dehydrogenase (cytochrome) K18930 dld; D-lactate dehydrogenase
D PputUW4_03426 lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D PputUW4_02418 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PputUW4_02881 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PputUW4_04539 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PputUW4_00843 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PputUW4_00342 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PputUW4_03216 carboxyphosphonoenolpyruvate phosphonomutase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112]
D PputUW4_05384 pycA; pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D PputUW4_05383 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PputUW4_02058 mqo1; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PputUW4_04558 mqo2; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PputUW4_04340 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PputUW4_01343 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PputUW4_01057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PputUW4_00211 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PputUW4_03653 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PputUW4_04990 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00946 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppuu00630]
D PputUW4_01813 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04990 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PputUW4_03806 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PputUW4_03534 acnA1; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PputUW4_02915 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_04244 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D PputUW4_02170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PputUW4_03117 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D PputUW4_03118 glcE; glycolate oxidase FAD binding subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D PputUW4_03119 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D PputUW4_00062 katE1; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D PputUW4_01756 catalase K03781 katE; catalase [EC:1.11.1.6]
D PputUW4_04857 cat; catalase-like protein K03781 katE; catalase [EC:1.11.1.6]
D PputUW4_00843 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PputUW4_04545 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PputUW4_00039 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PputUW4_04040 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PputUW4_04922 gph2; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PputUW4_05201 glnA5; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_05203 glnA6; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03105 puuA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03244 glnA3; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04145 glnA4; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00285 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01890 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_02765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01296 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01863 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04696 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_05012 glyA3; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_05228 gcvP2; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PputUW4_04281 gcvP1; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PputUW4_05230 gcvT2; glycine cleavage system aminomethyltransferaseT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_04283 gcvT1; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05229 gcvH3; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_01864 gcvH1; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_04280 gcvH2; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_03819 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D PputUW4_03820 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D PputUW4_03821 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D PputUW4_02428 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_03822 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_03426 lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D PputUW4_04248 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PputUW4_00910 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D PputUW4_00911 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D PputUW4_00912 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PputUW4_02556 fdnG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PputUW4_02557 fdoG; formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PputUW4_00913 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PputUW4_02558 fdoH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PputUW4_00914 NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PputUW4_02559 fdoI; formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PputUW4_04324 purU1; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PputUW4_05007 purU2; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PputUW4_00309 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:ppuu00640]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PputUW4_00798 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PputUW4_02962 bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PputUW4_02963 bkdA2; 2-oxoisovalerate dehydrogenase beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PputUW4_02964 bkdB; branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_02465 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PputUW4_02401 zinc-containing alcohol dehydrogenase superfamily protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_01104 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PputUW4_00553 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PputUW4_00552 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PputUW4_03441 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PputUW4_00600 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PputUW4_02170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PputUW4_03798 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PputUW4_03797 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PputUW4_00601 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_00607 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_02230 mmsA3; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_03657 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PputUW4_03656 acnA2; aconitate hydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D PputUW4_03655 prpF; methylitaconate delta2-delta3-isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D PputUW4_02915 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PputUW4_03658 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D PputUW4_04264 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:ppuu00650]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03317 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_01741 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_02465 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PputUW4_01661 mhpF; acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D PputUW4_04244 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D PputUW4_00331 phaC2; Poly(R)-hydroxyalkanoic acid synthase, class II K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PputUW4_00333 phaC1_1; Poly(3-hydroxyalkanoate) polymerase 1 K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PputUW4_02300 phaC1_2; poly(3-hydroxyalkanoate) synthase 1 K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PputUW4_01201 catI; 3-oxoadipate:succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D PputUW4_01202 catJ; 3-oxoadipate:succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D PputUW4_01689 CoA-transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D PputUW4_03803 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PputUW4_03802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PputUW4_03805 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PputUW4_03804 sdhD; succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PputUW4_00147 gabT1; 4-aminobutyrate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PputUW4_03199 gabD2; succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_00146 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_03323 succinate-semialdehyde dehydrogenase (NAD(P)(+)) K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D PputUW4_00103 cat1; succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PputUW4_01767 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PputUW4_03010 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PputUW4_01996 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PputUW4_01995 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PputUW4_02372 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D PputUW4_02373 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D PputUW4_04355 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04613 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_00877 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04612 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ppuu00660]
D PputUW4_04355 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04613 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_00877 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04612 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PputUW4_03339 L-carnitine dehydratase/bile acid-inducible protein F K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D PputUW4_03798 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PputUW4_03797 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PputUW4_01806 MaoC Domain Protein Dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D PputUW4_03342 hypothetical protein K18291 ich-P; itaconyl-CoA hydratase / mesaconyl-C4 CoA hydratase [EC:4.2.1.56 4.2.1.-]
D PputUW4_03343 citrate lyase beta chain K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D PputUW4_01805 citE; Citrate lyase subunit beta K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D PputUW4_03333 dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D PputUW4_03451 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PputUW4_03450 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PputUW4_03448 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ppuu00562]
D PputUW4_02517 hypothetical protein K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D PputUW4_02518 hypothetical protein K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D PputUW4_00924 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PputUW4_00601 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_00607 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_02230 mmsA3; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_00702 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ppuu00190]
D PputUW4_01802 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PputUW4_01801 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PputUW4_01800 nuoCD; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D PputUW4_01799 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PputUW4_01798 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PputUW4_01797 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PputUW4_01796 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PputUW4_01795 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PputUW4_01794 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PputUW4_01793 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PputUW4_01792 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PputUW4_01791 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PputUW4_01790 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PputUW4_04650 ndh2; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PputUW4_03247 ndh1; NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PputUW4_03803 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PputUW4_03802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PputUW4_03805 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PputUW4_03804 sdhD; succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PputUW4_04524 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PputUW4_04523 petB; cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PputUW4_04522 petC; ubiquinol--cytochrome C reductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PputUW4_00057 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00855 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00854 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PputUW4_02711 hypothetical protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D PputUW4_00052 ctaE1; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PputUW4_02712 ctaE2; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PputUW4_02713 ctaE3; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PputUW4_00050 ctaD1; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PputUW4_02714 ctaD2; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PputUW4_00049 ctaC; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PputUW4_02715 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PputUW4_00051 ctaG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PputUW4_00056 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PputUW4_03558 ccoN1; cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PputUW4_03562 ccoN2; cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PputUW4_03559 ccoO1; cytochrome c oxidase cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PputUW4_03563 ccoO2; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PputUW4_03560 ccoQ1; cytochrome-c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PputUW4_03564 ccoQ2; cytochrome c oxidase, cbb3-type, CcoQ subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PputUW4_03561 ccoP1; cytochrome c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PputUW4_03565 ccoP2; cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PputUW4_00853 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PputUW4_00852 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PputUW4_00851 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PputUW4_03055 cydA1; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PputUW4_04711 cydA2; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PputUW4_03054 cydB1; cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PputUW4_04710 cydB2; cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PputUW4_01878 cytochrome c2 K08738 CYC; cytochrome c
D PputUW4_04365 hypothetical protein K08738 CYC; cytochrome c
D PputUW4_05429 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PputUW4_05427 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PputUW4_05428 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PputUW4_05430 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PputUW4_05426 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PputUW4_05433 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PputUW4_05431 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PputUW4_05432 atpE; ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PputUW4_02102 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D PputUW4_04807 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PputUW4_05257 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PputUW4_03091 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ppuu00710]
D PputUW4_05064 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PputUW4_04263 gap2; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_03509 gap1; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_05061 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PputUW4_00292 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PputUW4_02103 tktB; transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_02104 tktA; transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_05066 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_05177 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PputUW4_00702 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PputUW4_04923 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PputUW4_03492 tal; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PputUW4_01057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PputUW4_00211 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PputUW4_00342 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Other carbon fixation pathways [PATH:ppuu00720]
D PputUW4_03653 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PputUW4_01057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PputUW4_05384 pycA; pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D PputUW4_05383 pycB; pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PputUW4_04340 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PputUW4_01343 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PputUW4_03803 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PputUW4_03802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PputUW4_03805 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PputUW4_03804 sdhD; succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PputUW4_03797 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PputUW4_03798 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01821 icd1; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PputUW4_01822 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PputUW4_03534 acnA1; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PputUW4_02915 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PputUW4_01104 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PputUW4_00553 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PputUW4_00552 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PputUW4_03441 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PputUW4_02170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PputUW4_01708 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PputUW4_05079 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PputUW4_00798 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ppuu00680]
D PputUW4_05006 fdhA; formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D PputUW4_02203 gfa; Glutathione-dependent formaldehyde-activating enzyme K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01113 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PputUW4_00912 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PputUW4_02556 fdnG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PputUW4_02557 fdoG; formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PputUW4_00913 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PputUW4_02558 fdoH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PputUW4_00914 NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PputUW4_02559 fdoI; formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PputUW4_00910 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D PputUW4_00911 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D PputUW4_01863 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04696 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_05012 glyA3; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04545 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PputUW4_03822 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_01108 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PputUW4_01057 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PputUW4_05061 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PputUW4_00292 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PputUW4_00798 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_03653 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PputUW4_00276 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PputUW4_05182 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PputUW4_01359 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PputUW4_00434 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PputUW4_03664 thrH; phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:ppuu00910]
D PputUW4_03640 nasA; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PputUW4_03644 nasC; assimilatory nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D PputUW4_03642 nasD; assimilatory nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D PputUW4_03643 nasE; assimilatory nitrite reductase small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D PputUW4_02400 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PputUW4_04908 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PputUW4_02136 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_02461 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_03019 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_02841 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PputUW4_05201 glnA5; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_05203 glnA6; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03105 puuA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03244 glnA3; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04145 glnA4; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00285 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01890 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_02765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01296 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00352 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PputUW4_00353 gltD1; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PputUW4_04277 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PputUW4_03410 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PputUW4_00046 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PputUW4_04598 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PputUW4_05204 cah; carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ppuu00920]
D PputUW4_03826 sbp; sulfate ABC transporter periplasmic protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PputUW4_00154 cysP; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PputUW4_00155 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PputUW4_00156 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PputUW4_00157 cysA; sulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PputUW4_05218 tauA3; taurine-binding periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D PputUW4_00200 tauA2; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D PputUW4_00198 tauC2; taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D PputUW4_00199 tauB2; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PputUW4_00197 tauD2; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D PputUW4_00167 atsR; periplasmic aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_05212 ssuA; sulfonate ABC transporter, periplasmic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_00119 tauA1; sulfonate/nitrate/taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_02319 nitrate ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_00166 atsB; aliphatic sulfonates ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PputUW4_05210 ssuC; aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D PputUW4_00121 tauC1; sulfonate/nitrate/taurine transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PputUW4_02320 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PputUW4_00165 atsC; sulfate ester transporter ATP-binding component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_05209 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_00120 tauB1; sulfonate/nitrate/taurine transport system ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_02321 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_05211 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PputUW4_05213 ssuE; NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PputUW4_00796 cysN; sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PputUW4_00795 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PputUW4_00228 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PputUW4_03665 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PputUW4_02945 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D PputUW4_00725 sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PputUW4_02350 cysI; sulphite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PputUW4_02958 oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PputUW4_05141 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PputUW4_00436 rhdA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PputUW4_04941 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PputUW4_00926 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PputUW4_00194 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PputUW4_01177 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PputUW4_04003 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PputUW4_05120 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PputUW4_02649 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PputUW4_03436 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PputUW4_02585 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PputUW4_04975 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PputUW4_04974 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PputUW4_00907 acyl-CoA dehydrogenase domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PputUW4_04977 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ppuu00061]
D PputUW4_01104 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PputUW4_00553 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PputUW4_00552 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PputUW4_03441 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PputUW4_00374 acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_00375 acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_03620 iacP; acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_04032 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_04034 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PputUW4_03890 fabH1; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PputUW4_00361 fabB1; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PputUW4_04100 fabB2; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PputUW4_00358 fabF1; 3-oxoacyl-[acyl carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_01383 fabF2; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_04031 fabF3; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_03669 fabG5; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00359 fabG1; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02063 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04390 fabG8; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02296 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_01652 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00574 fabG2; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02236 fabG3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04033 fabG6; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_03034 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04099 fabA2; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PputUW4_01099 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PputUW4_02888 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PputUW4_04241 fadD1; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04242 fadD2; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04092 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ppuu00071]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01341 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03522 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_02465 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PputUW4_01770 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_03338 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_03574 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02291 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02067 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02074 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02601 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02751 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02077 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_04528 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D PputUW4_04060 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PputUW4_00108 mmgC; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PputUW4_04241 fadD1; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04242 fadD2; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04092 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_05349 rubredoxin-NAD+ reductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ppuu00561]
D PputUW4_02428 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_03822 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_04416 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PputUW4_01072 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PputUW4_04035 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PputUW4_04948 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PputUW4_03680 plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PputUW4_00005 plsC1; phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PputUW4_01132 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PputUW4_00502 lipA1; lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D PputUW4_02381 lipA2; lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:ppuu00564]
D PputUW4_04095 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PputUW4_04418 glpD2; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PputUW4_00622 glpD1; FAD-dependent glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PputUW4_01072 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PputUW4_04948 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PputUW4_03680 plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PputUW4_00005 plsC1; phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PputUW4_03540 glycerol-3-phosphate cytidyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D PputUW4_01132 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PputUW4_04205 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PputUW4_03506 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PputUW4_04802 eutB; ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D PputUW4_04803 eutC; ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D PputUW4_01093 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PputUW4_03459 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PputUW4_02019 Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D PputUW4_02783 phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PputUW4_04610 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PputUW4_00435 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PputUW4_02388 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PputUW4_04824 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PputUW4_05405 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PputUW4_04847 cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PputUW4_02389 phospholipase D/transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D PputUW4_05316 phospholipase D/transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ppuu00565]
D PputUW4_00621 alkyldihydroxyacetonephosphate synthase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D PputUW4_00986 YhhN-like protein K18575 TMEM86B; alkenylglycerophosphocholine hydrolase [EC:3.3.2.2]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ppuu00592]
D PputUW4_01341 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03522 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ppuu01040]
D PputUW4_00151 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PputUW4_01409 acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PputUW4_04730 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PputUW4_05366 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ppuu00230]
D PputUW4_00424 nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PputUW4_00227 nudE1; ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PputUW4_01664 nudE2; ADP-ribose diphosphatase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_04582 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PputUW4_03437 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PputUW4_00546 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PputUW4_03785 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PputUW4_00977 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PputUW4_00963 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PputUW4_03784 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PputUW4_05370 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PputUW4_05371 purE; phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PputUW4_01290 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PputUW4_01817 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PputUW4_00547 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PputUW4_03573 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PputUW4_01419 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PputUW4_01116 surE1; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PputUW4_01671 surE2; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PputUW4_00226 HAD family hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D PputUW4_01471 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PputUW4_04652 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PputUW4_04562 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PputUW4_00979 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PputUW4_00935 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PputUW4_05123 rdgB; deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PputUW4_05304 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PputUW4_03599 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D PputUW4_03600 xdhB; Xanthine dehydrogenase, molybdopterin-binding subunit B K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D PputUW4_00980 guaA1; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PputUW4_03602 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PputUW4_05334 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PputUW4_04133 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PputUW4_04186 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PputUW4_01452 dgt; deoxyguanosinetriphospha tetriphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D PputUW4_05336 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PputUW4_05256 ppx; Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PputUW4_01875 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PputUW4_04105 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PputUW4_05281 cya; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D PputUW4_00457 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PputUW4_04755 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PputUW4_03273 lysine decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PputUW4_00587 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D PputUW4_01058 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PputUW4_04104 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PputUW4_00426 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PputUW4_04940 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D PputUW4_00796 cysN; sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PputUW4_00795 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PputUW4_03714 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D PputUW4_03716 hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D PputUW4_03667 hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D PputUW4_02132 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D PputUW4_03715 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D PputUW4_03717 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D PputUW4_03718 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D PputUW4_00512 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PputUW4_00513 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PputUW4_00516 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PputUW4_04277 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ppuu00240]
D PputUW4_00694 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PputUW4_00693 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PputUW4_05111 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PputUW4_05112 pyrC2; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PputUW4_04404 pyrC1; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PputUW4_03610 pyrD2; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PputUW4_05328 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PputUW4_04085 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PputUW4_01090 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PputUW4_00935 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PputUW4_04104 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PputUW4_00766 maf1; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PputUW4_05058 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D PputUW4_01106 pyrG1; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PputUW4_01363 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PputUW4_01419 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PputUW4_01116 surE1; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PputUW4_01671 surE2; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PputUW4_01471 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PputUW4_04563 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PputUW4_05110 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PputUW4_03273 lysine decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PputUW4_01604 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PputUW4_01151 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PputUW4_04133 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PputUW4_04186 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PputUW4_04028 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PputUW4_05325 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PputUW4_05168 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PputUW4_02929 gltD2; glutamate synthase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PputUW4_02930 pyrD1; dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PputUW4_02928 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PputUW4_02926 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppuu00250]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01277 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PputUW4_04533 asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PputUW4_05375 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PputUW4_03404 ansB; glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PputUW4_01338 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PputUW4_00945 yafV; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PputUW4_01441 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PputUW4_05373 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PputUW4_04402 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PputUW4_05277 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PputUW4_00457 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PputUW4_01817 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PputUW4_05111 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PputUW4_00147 gabT1; 4-aminobutyrate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PputUW4_03199 gabD2; succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_00146 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_03323 succinate-semialdehyde dehydrogenase (NAD(P)(+)) K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D PputUW4_00352 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PputUW4_00353 gltD1; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PputUW4_02841 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PputUW4_00387 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PputUW4_05201 glnA5; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_05203 glnA6; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03105 puuA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03244 glnA3; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04145 glnA4; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00285 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01890 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_02765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01296 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00694 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PputUW4_00693 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PputUW4_05423 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PputUW4_00968 sugar isomerase (SIS) domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PputUW4_03437 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ppuu00260]
D PputUW4_04164 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PputUW4_03447 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PputUW4_04427 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PputUW4_02644 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PputUW4_00068 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D PputUW4_03664 thrH; phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D PputUW4_04426 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PputUW4_02646 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PputUW4_02275 phenylserine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PputUW4_04166 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PputUW4_05014 ltaE; L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PputUW4_01863 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04696 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_05012 glyA3; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04545 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PputUW4_00843 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PputUW4_02428 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_03822 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PputUW4_00276 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PputUW4_05182 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PputUW4_01359 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PputUW4_00434 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PputUW4_05086 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PputUW4_05228 gcvP2; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PputUW4_04281 gcvP1; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PputUW4_05230 gcvT2; glycine cleavage system aminomethyltransferaseT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_04283 gcvT1; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05229 gcvH3; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_01864 gcvH1; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_04280 gcvH2; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_02783 phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PputUW4_04610 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PputUW4_01870 betA1; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PputUW4_02213 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PputUW4_05048 betA2; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PputUW4_05047 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PputUW4_03042 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PputUW4_03139 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PputUW4_04354 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PputUW4_05019 Rieske (2Fe-2S) domain-containing protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D PputUW4_05018 oxidoreductase FAD-binding domain protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D PputUW4_05025 NADH:flavin oxidoreductase/NADH oxidase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D PputUW4_05024 iron-binding membrane protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D PputUW4_05023 etfA3; electron transfer flavoprotein subunit alpha K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D PputUW4_05022 etfB3; electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D PputUW4_03843 sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D PputUW4_05009 soxA; sarcosine oxidase, alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D PputUW4_05011 soxB; sarcosine oxidase, beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D PputUW4_05008 soxG; sarcosine oxidase, gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D PputUW4_05010 soxD; sarcosine oxidase, delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D PputUW4_03161 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PputUW4_03162 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PputUW4_00833 sdaA1; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PputUW4_05041 sdaA3; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PputUW4_04282 sdaA2; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PputUW4_05176 ilvA2; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PputUW4_02508 ilvA1; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PputUW4_02706 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PputUW4_01924 pyridoxal-5'-phosphate-dependent protein beta subunit K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D PputUW4_02369 hypothetical protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PputUW4_00096 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PputUW4_00095 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PputUW4_01500 pvdH; diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:ppuu00270]
D PputUW4_00926 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PputUW4_00194 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PputUW4_01177 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PputUW4_04003 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PputUW4_03162 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PputUW4_02555 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PputUW4_03161 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PputUW4_02354 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PputUW4_02038 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PputUW4_05068 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PputUW4_04913 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PputUW4_03691 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PputUW4_02826 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PputUW4_04652 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PputUW4_01356 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PputUW4_03513 mtnP; 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D PputUW4_01357 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PputUW4_03699 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D PputUW4_03697 mtnC; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D PputUW4_03698 mtnD; acireductone dioxygenase, ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D PputUW4_03469 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PputUW4_01447 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PputUW4_04188 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PputUW4_05078 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PputUW4_04154 acdS; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PputUW4_01743 D-cysteine desulfhydrase family protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PputUW4_04164 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PputUW4_03447 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PputUW4_04427 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PputUW4_02644 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PputUW4_05120 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PputUW4_02649 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PputUW4_03436 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PputUW4_00866 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_02966 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_00201 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PputUW4_05106 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_05141 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PputUW4_00436 rhdA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PputUW4_00193 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D PputUW4_00833 sdaA1; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PputUW4_05041 sdaA3; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PputUW4_04282 sdaA2; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PputUW4_01924 pyridoxal-5'-phosphate-dependent protein beta subunit K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D PputUW4_04107 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D PputUW4_05182 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PputUW4_01359 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ppuu00280]
D PputUW4_00866 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_02966 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_00829 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PputUW4_02962 bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PputUW4_02963 bkdA2; 2-oxoisovalerate dehydrogenase beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PputUW4_02964 bkdB; branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_02465 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PputUW4_01770 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_03338 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_03574 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02291 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02067 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02074 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02601 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02751 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_02077 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PputUW4_01765 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_01341 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03522 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_02170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PputUW4_00608 mmsB1; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PputUW4_02229 mmsB2; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PputUW4_00601 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_00607 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_02230 mmsA3; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_00600 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PputUW4_01762 biotin carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D PputUW4_01764 propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PputUW4_01763 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PputUW4_01767 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PputUW4_03010 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PputUW4_01996 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PputUW4_01995 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PputUW4_02372 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppuu00290]
D PputUW4_05176 ilvA2; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PputUW4_02508 ilvA1; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PputUW4_02706 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PputUW4_01924 pyridoxal-5'-phosphate-dependent protein beta subunit K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D PputUW4_03451 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PputUW4_03450 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PputUW4_03448 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PputUW4_04355 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04613 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_00877 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04612 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PputUW4_04611 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PputUW4_02057 ilvD1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PputUW4_05153 ilvD3; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PputUW4_00866 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_02966 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_00829 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PputUW4_01441 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PputUW4_00946 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ppuu00300]
D PputUW4_04427 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PputUW4_02644 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PputUW4_04164 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PputUW4_03447 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PputUW4_01287 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PputUW4_01241 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PputUW4_03269 dapA3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PputUW4_00692 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PputUW4_01081 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PputUW4_00886 argD1; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PputUW4_04972 aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PputUW4_01085 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D PputUW4_01076 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PputUW4_05287 dapF2; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PputUW4_01603 dapF1; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PputUW4_05286 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PputUW4_03710 aminotransferase class I and II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PputUW4_04508 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PputUW4_04507 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ppuu00310]
D PputUW4_00479 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D PputUW4_00806 gabT2; 4-aminobutyrate aminotransferase K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39]
D PputUW4_03800 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_00108 mmgC; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_04962 iaaM; tryptophan 2-monooxygenase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D PputUW4_04963 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D PputUW4_01032 ydcW1; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D PputUW4_01037 ydcW2; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D PputUW4_00147 gabT1; 4-aminobutyrate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PputUW4_03199 gabD2; succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_00146 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_03220 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D PputUW4_00109 L-carnitine dehydratase/bile acid-inducible protein F K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D PputUW4_02457 malate dehydrogenase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D PputUW4_00480 puuB1; FAD dependent oxidoreductase K26065 amaA; L-pipecolate oxidase
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_05037 gamma-butyrobetaine hydroxylase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1]
C 00220 Arginine biosynthesis [PATH:ppuu00220]
D PputUW4_04411 argF2; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PputUW4_04276 argF1; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PputUW4_04402 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PputUW4_05277 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PputUW4_01257 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D PputUW4_01256 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D PputUW4_00512 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PputUW4_00513 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PputUW4_00516 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PputUW4_04275 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PputUW4_03404 ansB; glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PputUW4_05201 glnA5; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_05203 glnA6; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03105 puuA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03244 glnA3; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04145 glnA4; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00285 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01890 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_02765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01296 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00694 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PputUW4_00693 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PputUW4_04277 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PputUW4_02841 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01441 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PputUW4_05219 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PputUW4_04315 argJ; bifunctional protein amino-acid N-acetyltransferase/glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PputUW4_05327 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PputUW4_04905 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PputUW4_00886 argD1; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PputUW4_04972 aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PputUW4_05220 argE2; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D PputUW4_03157 argE1; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ppuu00330]
D PputUW4_01604 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PputUW4_02877 Orn/Lys/Arg decarboxylase family protein K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D PputUW4_02029 Arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D PputUW4_00561 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PputUW4_02471 speB2; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PputUW4_01867 speB1; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PputUW4_00235 aguA1; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PputUW4_02909 aguA2; peptidyl-arginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PputUW4_04531 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PputUW4_00729 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PputUW4_03070 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PputUW4_03691 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PputUW4_02826 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PputUW4_04913 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PputUW4_05200 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PputUW4_04745 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PputUW4_01030 spdH; spermidine dehydrogenase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_01032 ydcW1; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D PputUW4_01037 ydcW2; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D PputUW4_05318 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D PputUW4_03104 puuC1; aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D PputUW4_05086 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PputUW4_02748 aspartate transaminase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PputUW4_02429 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PputUW4_03176 aspartate aminotransferase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02749 hypothetical protein K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75]
D PputUW4_03956 speB3; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D PputUW4_03233 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_03350 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_04173 astA2; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PputUW4_04174 astA3; arginine N-succinyltransferase, alpha subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PputUW4_03214 astA1; arginine N-succinyltransferase subunit alpha K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PputUW4_03215 aruG; arginine N-succinyltransferase subunit beta K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PputUW4_04171 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D PputUW4_04175 argD2; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D PputUW4_04172 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PputUW4_04169 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D PputUW4_03417 puuB6; Gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PputUW4_03103 puuB4; FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PputUW4_05313 dadA2; glycine/D-amino acid oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PputUW4_02767 puuB2; FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PputUW4_03068 puuB3; gamma-glutamylputrescine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PputUW4_03246 puuB5; FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PputUW4_04746 puuC2; aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D PputUW4_05117 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PputUW4_03846 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PputUW4_00387 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PputUW4_04673 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PputUW4_04787 proA2; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PputUW4_03017 proA1; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PputUW4_00312 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ppuu00340]
D PputUW4_00790 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PputUW4_00456 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PputUW4_00322 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PputUW4_00323 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PputUW4_00270 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PputUW4_00268 hisH; imidazole glycerol phosphate synthase,glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PputUW4_00271 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PputUW4_00267 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PputUW4_01361 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00792 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_01810 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00791 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PputUW4_00369 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PputUW4_00305 hutH1; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PputUW4_00306 hutH2; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PputUW4_00301 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PputUW4_00308 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PputUW4_00297 hutF; N-formimino-L-glutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D PputUW4_00309 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_05086 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:ppuu00350]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01361 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00792 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_01810 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_03469 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PputUW4_02423 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PputUW4_00825 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PputUW4_00827 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PputUW4_00826 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PputUW4_05086 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PputUW4_01868 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01292 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D PputUW4_03425 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PputUW4_03199 gabD2; succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_00146 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ppuu00360]
D PputUW4_03913 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PputUW4_05086 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PputUW4_01868 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D PputUW4_02752 enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03317 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01361 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00792 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_01810 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_03469 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PputUW4_02833 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D PputUW4_02423 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PputUW4_05310 dadA1; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PputUW4_03185 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D PputUW4_03233 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_03350 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_00898 Rieske (2Fe-2S) domain-containing protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D PputUW4_02144 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:ppuu00380]
D PputUW4_03800 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_00108 mmgC; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_05086 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02136 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_02461 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_03019 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_03351 nthA; nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PputUW4_03352 nthB; nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PputUW4_04530 amine oxidase K00466 iaaM; tryptophan 2-monooxygenase [EC:1.13.12.3]
D PputUW4_03233 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_03350 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_00062 katE1; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D PputUW4_01756 catalase K03781 katE; catalase [EC:1.11.1.6]
D PputUW4_04857 cat; catalase-like protein K03781 katE; catalase [EC:1.11.1.6]
D PputUW4_03185 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppuu00400]
D PputUW4_02383 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PputUW4_01415 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PputUW4_01434 3-deoxy-D-arabino-heptulosonate-7-phosphatesynthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PputUW4_00350 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PputUW4_00554 aroQ1; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PputUW4_04720 aroQ2; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PputUW4_04723 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D PputUW4_04721 aroE2; shikimate 5-dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D PputUW4_00022 aroE1; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PputUW4_04960 quiA; quinate/shikimate dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D PputUW4_00349 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PputUW4_01362 aroA; bifunctional cyclohexadienyldehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D PputUW4_03701 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PputUW4_04921 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PputUW4_04919 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PputUW4_04918 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PputUW4_03442 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PputUW4_04917 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PputUW4_00096 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PputUW4_00095 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PputUW4_01885 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D PputUW4_01360 pheA; chorismate mutase/prephenate dehydrogenase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PputUW4_03490 pheC; cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01361 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00792 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_01810 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_03469 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PputUW4_03913 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ppuu00410]
D PputUW4_04633 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PputUW4_01030 spdH; spermidine dehydrogenase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_01032 ydcW1; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D PputUW4_01037 ydcW2; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D PputUW4_04632 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PputUW4_02929 gltD2; glutamate synthase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PputUW4_02930 pyrD1; dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PputUW4_02928 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PputUW4_02926 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PputUW4_00600 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_02465 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PputUW4_00601 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_00607 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PputUW4_02230 mmsA3; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ppuu00430]
D PputUW4_04590 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_01850 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_00197 tauD2; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D PputUW4_02841 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PputUW4_00798 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00440 Phosphonate and phosphinate metabolism [PATH:ppuu00440]
D PputUW4_01745 phnX1; phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PputUW4_02573 phnX2; 2-phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PputUW4_01746 phnW1; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PputUW4_02575 phnW2; 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PputUW4_05161 metal dependent phosphohydrolase K21196 phnZ; 2-amino-1-hydroxyethylphosphonate dioxygenase (glycine-forming) [EC:1.13.11.78]
C 00450 Selenocompound metabolism [PATH:ppuu00450]
D PputUW4_02649 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PputUW4_02555 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PputUW4_02354 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PputUW4_02038 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PputUW4_03162 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PputUW4_00796 cysN; sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PputUW4_00795 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PputUW4_01619 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PputUW4_02561 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PputUW4_04392 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ppuu00460]
D PputUW4_01227 glycoside hydrolase family protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PputUW4_02136 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_02461 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_03019 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_04590 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_01850 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_04533 asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PputUW4_05375 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PputUW4_01863 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04696 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_05012 glyA3; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ppuu00470]
D PputUW4_05308 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PputUW4_04501 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_04591 ddlA; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_03404 ansB; glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PputUW4_04574 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PputUW4_04505 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PputUW4_02369 hypothetical protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PputUW4_00193 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D PputUW4_05287 dapF2; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PputUW4_01603 dapF1; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PputUW4_05286 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PputUW4_04462 FAD dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D PputUW4_04461 ornithine cyclodeaminase K19744 dauB; L-arginine dehydrogenase [EC:1.4.1.25]
D PputUW4_03027 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D PputUW4_03030 D-amino-acid dehydrogenase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
D PputUW4_03028 dapA2; dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D PputUW4_02858 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03991 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03183 aldH; aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_03029 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PputUW4_05310 dadA1; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ppuu00480]
D PputUW4_04590 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_01850 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_05246 chaC; cation transport protein ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D PputUW4_04009 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PputUW4_04008 allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D PputUW4_04007 allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D PputUW4_00201 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PputUW4_05106 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PputUW4_00953 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PputUW4_02866 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PputUW4_05417 gstA; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_05278 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04228 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_03021 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04314 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_00864 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04058 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_02852 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_02413 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PputUW4_01821 icd1; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PputUW4_01822 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PputUW4_02430 gluconate 2-dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D PputUW4_02478 gnd; 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PputUW4_02479 zwf1; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PputUW4_04250 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PputUW4_03762 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PputUW4_00801 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PputUW4_01443 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PputUW4_00729 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PputUW4_03070 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PputUW4_03691 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PputUW4_02826 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ppuu00540]
D PputUW4_01100 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PputUW4_04497 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PputUW4_01098 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PputUW4_01777 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PputUW4_01101 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PputUW4_04051 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PputUW4_00782 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PputUW4_01107 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PputUW4_00781 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PputUW4_04049 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PputUW4_00419 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PputUW4_00010 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PputUW4_03724 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PputUW4_04002 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D PputUW4_02500 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D PputUW4_01297 transmembrane sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PputUW4_04573 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PputUW4_04518 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PputUW4_00413 rfaE; bifunctional heptose 7-phosphate kinase/heptose1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PputUW4_00006 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PputUW4_00398 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PputUW4_00397 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PputUW4_00400 rfaP; lipopolysaccharide kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D PputUW4_02477 membrane protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PputUW4_00399 rfaG; lipopolysaccharide core biosynthesis protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppuu00541]
D PputUW4_02411 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PputUW4_04841 galE2; NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PputUW4_01987 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_02777 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PputUW4_01986 UDP-glucuronate 5 -epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PputUW4_03050 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PputUW4_03548 rfbA2; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_01388 rfbA1; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_03547 rfbB2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_01389 rfbB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_00233 rfbC1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03549 rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03901 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03550 rfbD3; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01375 rfbD1; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01387 rfbD2; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_04842 rfbD4; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01369 rffA; lipopolysaccharide biosynthesis protein RffA K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D PputUW4_03903 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PputUW4_03902 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PputUW4_05247 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D PputUW4_04482 algA; bifunctional protein mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_01528 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_01529 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PputUW4_01530 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D PputUW4_03899 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D PputUW4_05425 glmU; bifunctional protein glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PputUW4_01377 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PputUW4_01376 capD1; polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PputUW4_03892 GCN5-related N-acetyltransferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D PputUW4_03893 pseF; acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D PputUW4_01380 capD2; polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D PputUW4_01378 galE1; UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:ppuu00550]
D PputUW4_00789 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PputUW4_04047 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PputUW4_04502 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PputUW4_04505 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PputUW4_04508 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PputUW4_04501 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_04591 ddlA; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_04507 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PputUW4_01092 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PputUW4_02492 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PputUW4_04506 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PputUW4_04503 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PputUW4_05130 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PputUW4_00343 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PputUW4_04616 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PputUW4_01522 mrdA1; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PputUW4_04783 mrdA2; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PputUW4_04509 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PputUW4_04779 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PputUW4_03606 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ppuu00552]
D PputUW4_02492 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PputUW4_03542 hypothetical protein K21591 tarF; teichoic acid glycerol-phosphate transferase [EC:2.7.8.45]
D PputUW4_01380 capD2; polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ppuu00543]
D PputUW4_04472 alg8; alginate biosynthesis protein Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D PputUW4_04473 alg44; alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D PputUW4_04479 algI; alginate biosynthesis protein AlgI K19294 algI; alginate O-acetyltransferase complex protein AlgI
D PputUW4_04480 algJ; alginate biosynthesis protein AlgJ K19295 algJ; alginate O-acetyltransferase complex protein AlgJ
D PputUW4_04481 algF; alginate biosynthesis protein AlgF K19296 algF; alginate O-acetyltransferase complex protein AlgF
D PputUW4_04477 algX; alginate biosynthesis protein AlgX K19293 algX; alginate biosynthesis protein AlgX
D PputUW4_00926 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PputUW4_00194 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PputUW4_03976 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ppuu00730]
D PputUW4_00421 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PputUW4_04758 bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PputUW4_00928 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_01513 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_00286 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PputUW4_04657 thiO; glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PputUW4_04818 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PputUW4_05127 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PputUW4_04759 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PputUW4_04825 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PputUW4_00443 rsgA; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PputUW4_01058 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ppuu00740]
D PputUW4_04822 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PputUW4_03228 ribBA2; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PputUW4_01669 ribBA1; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PputUW4_04828 ribBA3; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PputUW4_04830 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PputUW4_05290 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PputUW4_04168 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PputUW4_04827 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PputUW4_04829 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PputUW4_04669 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PputUW4_05213 ssuE; NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PputUW4_03773 bluB; cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D PputUW4_00424 nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PputUW4_04797 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ppuu00750]
D PputUW4_01173 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PputUW4_05396 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PputUW4_05065 epd; D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D PputUW4_03530 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D PputUW4_01359 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PputUW4_03994 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PputUW4_04937 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PputUW4_00961 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PputUW4_04426 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PputUW4_02646 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ppuu00760]
D PputUW4_01277 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PputUW4_04286 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PputUW4_00712 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PputUW4_00477 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PputUW4_01419 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PputUW4_01116 surE1; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PputUW4_01671 surE2; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PputUW4_04786 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PputUW4_04104 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PputUW4_02787 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PputUW4_00476 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PputUW4_01124 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PputUW4_02871 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PputUW4_03507 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PputUW4_00105 pntAB; NAD/NADP transhydrogenase alpha subunit part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PputUW4_00106 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PputUW4_00104 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PputUW4_03199 gabD2; succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_00146 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PputUW4_03323 succinate-semialdehyde dehydrogenase (NAD(P)(+)) K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:ppuu00770]
D PputUW4_04355 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04613 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_00877 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PputUW4_04612 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PputUW4_04611 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PputUW4_02057 ilvD1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PputUW4_05153 ilvD3; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PputUW4_04631 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PputUW4_04310 panE2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PputUW4_01418 panE1; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PputUW4_04632 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PputUW4_04899 coaX; pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PputUW4_05324 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PputUW4_04104 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PputUW4_05146 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PputUW4_04643 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PputUW4_01219 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PputUW4_00866 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_02966 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_02929 gltD2; glutamate synthase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PputUW4_02930 pyrD1; dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PputUW4_02928 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PputUW4_02926 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PputUW4_04633 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02572 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
C 00780 Biotin metabolism [PATH:ppuu00780]
D PputUW4_04980 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PputUW4_00361 fabB1; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PputUW4_04100 fabB2; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PputUW4_00358 fabF1; 3-oxoacyl-[acyl carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_01383 fabF2; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_04031 fabF3; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_03669 fabG5; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00359 fabG1; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02063 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04390 fabG8; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02296 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_01652 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00574 fabG2; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02236 fabG3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04033 fabG6; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_03034 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_01099 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PputUW4_02888 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PputUW4_04981 bioH; biotin synthesis protein BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PputUW4_04982 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PputUW4_05087 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PputUW4_04979 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PputUW4_04983 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PputUW4_04900 birA; bifunctional protein biotin operon repressor/biotin-[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ppuu00785]
D PputUW4_04777 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PputUW4_01862 lis1; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PputUW4_04776 lis2; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_00395 aceE1; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_04151 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PputUW4_00394 aceF1; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_04150 aceF2; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PputUW4_03801 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PputUW4_03800 sucB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PputUW4_02962 bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PputUW4_02963 bkdA2; 2-oxoisovalerate dehydrogenase beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PputUW4_02964 bkdB; branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PputUW4_05228 gcvP2; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PputUW4_04281 gcvP1; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PputUW4_05230 gcvT2; glycine cleavage system aminomethyltransferaseT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_04283 gcvT1; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_05229 gcvH3; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_01864 gcvH1; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PputUW4_04280 gcvH2; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ppuu00790]
D PputUW4_03708 folE2; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PputUW4_00810 folE1; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PputUW4_05401 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PputUW4_00393 phoD1; phosphodiesterase/alkaline phosphatase D-like protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PputUW4_00722 phoD2; putative exported alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PputUW4_04947 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PputUW4_04946 folK2; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PputUW4_04630 folK1; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PputUW4_00700 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PputUW4_05157 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PputUW4_03440 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PputUW4_04822 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PputUW4_03228 ribBA2; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PputUW4_01669 ribBA1; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PputUW4_04828 ribBA3; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PputUW4_03663 pabB; aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PputUW4_04030 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PputUW4_00809 folX; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D PputUW4_00811 short chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D PputUW4_01606 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PputUW4_03914 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PputUW4_03913 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PputUW4_04288 radical SAM family protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PputUW4_04287 ExsB family transcriptional regulator K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PputUW4_03498 cinQ; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PputUW4_04024 moaA2; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PputUW4_03057 moaA1; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PputUW4_03064 moaC1; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PputUW4_04467 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PputUW4_03066 moaE1; molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PputUW4_04465 moaE2; molybdopterin biosynthesis MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PputUW4_03061 moaB2; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PputUW4_01462 moaB1; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PputUW4_03060 moeA2; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PputUW4_01463 moeA1; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PputUW4_04043 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D PputUW4_01461 mobA; molybdopterin-guanine dinucleotidebiosynthesisprotein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ppuu00670]
D PputUW4_05157 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PputUW4_00811 short chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D PputUW4_01708 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PputUW4_01863 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_04696 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_05012 glyA3; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PputUW4_03785 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PputUW4_00547 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PputUW4_00015 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PputUW4_05230 gcvT2; glycine cleavage system aminomethyltransferaseT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_04283 gcvT1; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PputUW4_02354 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PputUW4_05168 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PputUW4_04324 purU1; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PputUW4_05007 purU2; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PputUW4_05079 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PputUW4_05239 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ppuu00860]
D PputUW4_03465 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PputUW4_04578 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PputUW4_04760 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PputUW4_01623 hemB1; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PputUW4_05258 hemB2; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PputUW4_05275 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PputUW4_05274 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PputUW4_00354 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PputUW4_00021 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PputUW4_03571 hemN1; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PputUW4_04907 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PputUW4_04565 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PputUW4_05273 hemX; uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PputUW4_01835 cobA1; uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PputUW4_03645 cobA2; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PputUW4_00057 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00855 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00056 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PputUW4_00540 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PputUW4_00538 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D PputUW4_00541 cobJ; precorrin-3 methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D PputUW4_02357 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PputUW4_02358 cbiG; cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D PputUW4_03212 cobF; precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D PputUW4_00534 cobK; cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PputUW4_00535 cbiD; cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PputUW4_00536 cobL; precorrin-6YC5, 15-methyltransferase(decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PputUW4_00539 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PputUW4_03774 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PputUW4_02362 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PputUW4_04312 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PputUW4_03775 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PputUW4_03770 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PputUW4_03772 cobD; cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PputUW4_03771 cobC2; threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D PputUW4_03769 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PputUW4_03766 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PputUW4_03768 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PputUW4_03767 cobC1; alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D PputUW4_02363 chlI; magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D PputUW4_04268 heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PputUW4_04389 pyridoxamine 5'-phosphate oxidase-like protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PputUW4_04408 bfr1; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D PputUW4_04856 bfr2; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppuu00130]
D PputUW4_04295 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PputUW4_05351 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PputUW4_05352 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PputUW4_05248 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PputUW4_04797 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PputUW4_05233 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PputUW4_01355 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PputUW4_05234 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PputUW4_00326 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PputUW4_04912 ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PputUW4_04091 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PputUW4_02746 ribosyldihydronicotinamide dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PputUW4_00611 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PputUW4_04118 wrbA; flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PputUW4_03311 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PputUW4_02114 quinone oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PputUW4_02423 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ppuu00900]
D PputUW4_04818 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PputUW4_01094 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PputUW4_01110 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PputUW4_04581 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PputUW4_01114 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PputUW4_00939 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PputUW4_04665 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_04797 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PputUW4_04817 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PputUW4_04677 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PputUW4_01092 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:ppuu00907]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_03046 zinc-containing alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D PputUW4_01477 Short-chain dehydrogenase/reductase SDR K13774 atuB; citronellol/citronellal dehydrogenase
D PputUW4_05017 short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase
D PputUW4_03695 acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D PputUW4_01475 acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D PputUW4_01473 biotin carboxylase K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D PputUW4_01476 propionyl-CoA carboxylase K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D PputUW4_01474 enoyl-CoA hydratase/isomerase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D PputUW4_01767 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PputUW4_03010 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PputUW4_01341 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03522 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PputUW4_02103 tktB; transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_02104 tktA; transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PputUW4_05066 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ppuu00523]
D PputUW4_03548 rfbA2; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_01388 rfbA1; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_03547 rfbB2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_01389 rfbB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_00233 rfbC1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03549 rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03901 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03550 rfbD3; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01375 rfbD1; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01387 rfbD2; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_04842 rfbD4; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PputUW4_04130 entD; 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D PputUW4_03547 rfbB2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_01389 rfbB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ppuu00946]
D PputUW4_01227 glycoside hydrolase family protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:ppuu00311]
D PputUW4_01913 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D PputUW4_05192 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:ppuu00332]
D PputUW4_04673 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PputUW4_04787 proA2; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PputUW4_03017 proA1; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ppuu00261]
D PputUW4_01501 mbtH; MbtH-like protein K05375 mbtH; MbtH protein
D PputUW4_00796 cysN; sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PputUW4_00795 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PputUW4_04164 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PputUW4_03447 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PputUW4_01287 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PputUW4_01241 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PputUW4_03269 dapA3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PputUW4_00692 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PputUW4_00514 GCN5-related N-acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ppuu00521]
D PputUW4_04261 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PputUW4_02541 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PputUW4_05326 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PputUW4_00924 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PputUW4_03548 rfbA2; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_01388 rfbA1; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_03547 rfbB2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_01389 rfbB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_00233 rfbC1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03549 rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03901 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PputUW4_03550 rfbD3; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01375 rfbD1; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_01387 rfbD2; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PputUW4_04842 rfbD4; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PputUW4_04261 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ppuu00525]
D PputUW4_03548 rfbA2; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_01388 rfbA1; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PputUW4_03547 rfbB2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PputUW4_01389 rfbB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ppuu00401]
D PputUW4_01362 aroA; bifunctional cyclohexadienyldehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01361 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00792 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_01810 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_03469 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PputUW4_04921 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PputUW4_04919 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PputUW4_04034 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PputUW4_03669 fabG5; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00359 fabG1; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02063 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04390 fabG8; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02296 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_01652 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00574 fabG2; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02236 fabG3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04033 fabG6; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_03034 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02888 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PputUW4_00374 acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_00375 acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_03620 iacP; acyl carrier protein K02078 acpP; acyl carrier protein
D PputUW4_04032 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppuu00999]
D PputUW4_05068 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PputUW4_00022 aroE1; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PputUW4_01227 glycoside hydrolase family protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D PputUW4_01481 pvdYII; Siderophore biosynthesis protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ppuu00362]
D PputUW4_03257 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D PputUW4_03256 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D PputUW4_03255 benC; benzoate 1,2-dioxygenase ferredoxin reductase subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PputUW4_03254 xylL; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D PputUW4_03259 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PputUW4_03261 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D PputUW4_03260 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D PputUW4_01207 pcaD1; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PputUW4_03981 Alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PputUW4_01341 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03522 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_01203 pcaF; beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D PputUW4_01660 mhpD; 2-hydroxypent-2,4-dienoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D PputUW4_01662 mhpE; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D PputUW4_01661 mhpF; acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D PputUW4_00243 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PputUW4_02734 hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D PputUW4_02735 tftE; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D PputUW4_01205 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PputUW4_01204 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D PputUW4_01206 pcaB1; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D PputUW4_02986 pcaB2; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D PputUW4_01208 pcaC1; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PputUW4_00757 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PputUW4_03200 pcaC2; carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PputUW4_02266 hybrid protein containing carboxymuconolactone decarboxylase domain and Cupin 2 barrel domain K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PputUW4_03333 dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D PputUW4_00933 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D PputUW4_04363 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D PputUW4_04295 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_00108 mmgC; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03317 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ppuu00627]
D PputUW4_03351 nthA; nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PputUW4_03352 nthB; nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PputUW4_03233 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_03350 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_02136 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_02461 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_03019 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_04797 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:ppuu00364]
D PputUW4_03257 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D PputUW4_03256 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D PputUW4_03255 benC; benzoate 1,2-dioxygenase ferredoxin reductase subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PputUW4_03254 xylL; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D PputUW4_03259 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PputUW4_03121 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PputUW4_03261 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D PputUW4_03351 nthA; nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PputUW4_03352 nthB; nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PputUW4_02735 tftE; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ppuu00625]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_02736 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_02747 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PputUW4_05006 fdhA; formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D PputUW4_02943 quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ppuu00361]
D PputUW4_03259 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PputUW4_03121 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PputUW4_02735 tftE; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D PputUW4_02734 hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D PputUW4_03261 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00623 Toluene degradation [PATH:ppuu00623]
D PputUW4_02070 enoyl-CoA hydratase/carnithine racemase K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180]
D PputUW4_03259 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PputUW4_03261 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D PputUW4_03121 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PputUW4_02735 tftE; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:ppuu00622]
D PputUW4_03257 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D PputUW4_03256 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D PputUW4_03255 benC; benzoate 1,2-dioxygenase ferredoxin reductase subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PputUW4_03254 xylL; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D PputUW4_00243 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PputUW4_01660 mhpD; 2-hydroxypent-2,4-dienoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D PputUW4_01662 mhpE; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D PputUW4_01661 mhpF; acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
C 00633 Nitrotoluene degradation [PATH:ppuu00633]
D PputUW4_02157 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D PputUW4_01341 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PputUW4_03522 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ppuu00643]
D PputUW4_01868 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D PputUW4_00825 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PputUW4_00827 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PputUW4_00826 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PputUW4_03351 nthA; nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PputUW4_03352 nthB; nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PputUW4_03233 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_03350 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PputUW4_02136 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_02461 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_03019 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D PputUW4_01201 catI; 3-oxoadipate:succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D PputUW4_01202 catJ; 3-oxoadipate:succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D PputUW4_01689 CoA-transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation [PATH:ppuu00791]
D PputUW4_01256 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D PputUW4_03242 isochorismatase hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D PputUW4_01257 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D PputUW4_00512 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PputUW4_00513 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PputUW4_00516 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ppuu00930]
D PputUW4_01540 isonitrile hydratase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D PputUW4_03011 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PputUW4_02466 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PputUW4_03523 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PputUW4_03683 fadJ; 3-hydroxyacyl-CoA dehydrogenase/short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D PputUW4_02595 2,4-dihydroxyacetophenone dioxygenase K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation [PATH:ppuu00621]
D PputUW4_00243 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PputUW4_01660 mhpD; 2-hydroxypent-2,4-dienoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D PputUW4_01662 mhpE; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D PputUW4_01661 mhpF; acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
C 00626 Naphthalene degradation [PATH:ppuu00626]
D PputUW4_02083 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PputUW4_01112 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D PputUW4_01205 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PputUW4_01204 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation [PATH:ppuu00365]
D PputUW4_02622 AMP-dependent synthetase and ligase K16876 hmfD; 2-furoate---CoA ligase [EC:6.2.1.31]
D PputUW4_02625 carbon-monoxide dehydrogenase, large subunit K16877 hmfA; 2-furoyl-CoA dehydrogenase large subunit [EC:1.3.99.8]
D PputUW4_02624 carbon monoxide dehydrogenase medium subunit K16878 hmfB; 2-furoyl-CoA dehydrogenase FAD binding subunit [EC:1.3.99.8]
D PputUW4_02623 carbon monoxide dehydrogenase small subunit K16879 hmfC; 2-furoyl-CoA dehydrogenase 2Fe-2S iron sulfur subunit [EC:1.3.99.8]
D PputUW4_02621 enoyl-CoA hydratase/isomerase K16880 hmfE; 2-oxoglutaroyl-CoA hydrolase
C 00984 Steroid degradation [PATH:ppuu00984]
D PputUW4_01674 3-oxosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D PputUW4_01666 rieske [2Fe-2S] domain protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D PputUW4_01678 FAD-binding oxidoreductase K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D PputUW4_01682 acyl-CoA dehydrogenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D PputUW4_03239 flavin reductase-like protein K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D PputUW4_01687 2,3-dihydroxybiphenyl-1,2-dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D PputUW4_01659 mhpC; 2,6-dioxo-6-phenylhexa-3-enoate hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D PputUW4_01676 acyl-CoA synthetase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D PputUW4_01679 3-beta-hydroxysteroid dehydrogenase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51]
D PputUW4_01655 3-ketosteroid-5-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
D PputUW4_01680 fumarate reductase/succinate dehydrogenase K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ppuu03020]
D PputUW4_04891 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PputUW4_04890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PputUW4_04859 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PputUW4_05335 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D PputUW4_02552 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ppuu03010]
D PputUW4_01364 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PputUW4_01088 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PputUW4_04878 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PputUW4_04860 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PputUW4_04867 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PputUW4_00463 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PputUW4_04888 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PputUW4_04870 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PputUW4_04525 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PputUW4_04885 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PputUW4_04861 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PputUW4_04889 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PputUW4_04862 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PputUW4_04871 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PputUW4_00709 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PputUW4_04433 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PputUW4_04875 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PputUW4_00464 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PputUW4_04880 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PputUW4_04671 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PputUW4_04950 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PputUW4_04894 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PputUW4_04881 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PputUW4_04884 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PputUW4_04883 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PputUW4_04872 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PputUW4_04869 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PputUW4_04892 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PputUW4_00466 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PputUW4_04893 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PputUW4_04895 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PputUW4_04526 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PputUW4_04874 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PputUW4_04865 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PputUW4_04877 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PputUW4_04858 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PputUW4_04868 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PputUW4_04430 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PputUW4_03387 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PputUW4_04676 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PputUW4_04879 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PputUW4_04882 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PputUW4_04873 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PputUW4_04583 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PputUW4_04675 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PputUW4_05321 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PputUW4_04876 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PputUW4_04866 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PputUW4_00340 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PputUW4_04036 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PputUW4_05320 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PputUW4_05443 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PputUW4_03388 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PputUW4_04863 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PputUW4_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0080 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0093 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0090 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0077 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0076 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0089 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppuu00970]
D PputUW4_R0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0091 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0078 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0069 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0059 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PputUW4_R0084 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PputUW4_R0052 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0053 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0061 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0041 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PputUW4_R0044 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PputUW4_R0074 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PputUW4_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0068 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0057 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0066 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0067 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0065 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0087 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0036 tRNA-His K14226 tRNA-His; tRNA His
D PputUW4_R0038 tRNA-His K14226 tRNA-His; tRNA His
D PputUW4_R0002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0013 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0021 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0031 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0079 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0092 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0048 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0042 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0073 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PputUW4_R0082 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PputUW4_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0075 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0094 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0009 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PputUW4_R0050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PputUW4_R0081 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PputUW4_R0083 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PputUW4_R0060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0072 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PputUW4_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PputUW4_R0086 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PputUW4_R0085 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PputUW4_R0088 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PputUW4_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0064 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0062 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0043 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PputUW4_03465 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PputUW4_00761 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PputUW4_00760 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PputUW4_00762 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PputUW4_01779 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PputUW4_04165 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PputUW4_04300 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PputUW4_00008 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PputUW4_00007 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PputUW4_03390 thrS1; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PputUW4_05403 thrS2; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PputUW4_01834 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PputUW4_02561 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PputUW4_01780 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PputUW4_04392 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PputUW4_00015 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PputUW4_04438 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PputUW4_04770 leuS2; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_01812 leuS1; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_04668 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PputUW4_01048 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PputUW4_00338 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PputUW4_01146 proS1; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PputUW4_03053 proS2; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PputUW4_00940 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PputUW4_03386 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PputUW4_03385 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PputUW4_04901 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PputUW4_04535 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ppuu03060]
D PputUW4_04864 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PputUW4_04897 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PputUW4_00703 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PputUW4_00920 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PputUW4_00921 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PputUW4_00919 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PputUW4_05440 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PputUW4_04316 secA2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PputUW4_00279 secB; preprotein translocase subunit K03071 secB; preprotein translocase subunit SecB
D PputUW4_04434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PputUW4_05135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PputUW4_00321 tatA; sec-independent translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D PputUW4_00320 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PputUW4_00319 tatC; Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D PputUW4_00957 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PputUW4_04667 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ppuu04122]
D PputUW4_00928 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_01513 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_05141 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PputUW4_00436 rhdA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PputUW4_03532 sirA; sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PputUW4_01283 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PputUW4_01839 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PputUW4_01840 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PputUW4_01841 tusD; tRNA 2-thiouridine synthesizing protein D K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PputUW4_01838 tusE; tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PputUW4_01819 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PputUW4_03066 moaE1; molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PputUW4_04465 moaE2; molybdopterin biosynthesis MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PputUW4_04024 moaA2; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PputUW4_03057 moaA1; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PputUW4_03065 moaD1; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D PputUW4_04466 moaD2; molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein
D PputUW4_04575 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PputUW4_02121 ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PputUW4_03064 moaC1; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PputUW4_04467 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PputUW4_03061 moaB2; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PputUW4_01462 moaB1; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PputUW4_00286 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PputUW4_05128 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:ppuu03018]
D PputUW4_05173 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PputUW4_04042 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PputUW4_04460 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PputUW4_01108 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PputUW4_00710 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PputUW4_05081 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PputUW4_04734 rhlE; ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PputUW4_00461 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PputUW4_01437 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PputUW4_03944 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PputUW4_00218 recQ1; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PputUW4_05249 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PputUW4_00690 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PputUW4_04386 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PputUW4_00452 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PputUW4_05257 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PputUW4_03091 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PputUW4_04629 pcnB; Poly(A) polymerase, PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ppuu03030]
D PputUW4_02878 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04993 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04737 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_01103 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PputUW4_03578 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PputUW4_04027 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PputUW4_04772 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PputUW4_00952 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PputUW4_00002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PputUW4_00467 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PputUW4_04951 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PputUW4_04853 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PputUW4_02879 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PputUW4_01102 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PputUW4_00070 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PputUW4_03595 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_05069 ligb; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ppuu03410]
D PputUW4_04398 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PputUW4_01266 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PputUW4_00263 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PputUW4_04788 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PputUW4_05148 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PputUW4_02907 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PputUW4_04272 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PputUW4_00009 tag1; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PputUW4_05329 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PputUW4_01773 xthA1; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PputUW4_03476 xthA2; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PputUW4_00070 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PputUW4_04420 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PputUW4_03595 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_05069 ligb; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ppuu03420]
D PputUW4_03510 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PputUW4_04855 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PputUW4_03468 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PputUW4_02387 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PputUW4_05390 mutB; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PputUW4_00070 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PputUW4_03595 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_05069 ligb; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_02552 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:ppuu03430]
D PputUW4_01121 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PputUW4_00450 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PputUW4_05390 mutB; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PputUW4_04326 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PputUW4_00948 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PputUW4_04816 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PputUW4_04420 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PputUW4_04853 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PputUW4_01103 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PputUW4_00002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PputUW4_03578 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PputUW4_04772 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PputUW4_04027 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PputUW4_02878 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04993 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04737 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_00952 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PputUW4_03595 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_05069 ligb; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ppuu03440]
D PputUW4_04420 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PputUW4_04853 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PputUW4_00003 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D PputUW4_00960 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PputUW4_03575 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PputUW4_01125 recA; recombinase A K03553 recA; recombination protein RecA
D PputUW4_00070 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PputUW4_04297 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PputUW4_04296 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PputUW4_04298 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PputUW4_05344 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PputUW4_00603 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PputUW4_00602 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PputUW4_00604 recD; DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PputUW4_01103 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PputUW4_00002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PputUW4_03578 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PputUW4_04772 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PputUW4_04027 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PputUW4_02878 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04993 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04737 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_00952 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PputUW4_00339 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D PputUW4_02501 KU domain-containing protein K10979 ku; DNA end-binding protein Ku
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ppuu03250]
D PputUW4_03982 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ppuu02010]
D PputUW4_03826 sbp; sulfate ABC transporter periplasmic protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PputUW4_00154 cysP; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PputUW4_00155 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PputUW4_00156 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PputUW4_00157 cysA; sulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PputUW4_05218 tauA3; taurine-binding periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D PputUW4_00200 tauA2; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D PputUW4_00198 tauC2; taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D PputUW4_00199 tauB2; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PputUW4_00167 atsR; periplasmic aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_05212 ssuA; sulfonate ABC transporter, periplasmic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_00119 tauA1; sulfonate/nitrate/taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_02319 nitrate ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_00166 atsB; aliphatic sulfonates ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PputUW4_05210 ssuC; aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D PputUW4_00121 tauC1; sulfonate/nitrate/taurine transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PputUW4_02320 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PputUW4_00165 atsC; sulfate ester transporter ATP-binding component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_05209 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_00120 tauB1; sulfonate/nitrate/taurine transport system ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_02321 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_02399 modA; molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D PputUW4_02398 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D PputUW4_02397 modC; molybdate ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PputUW4_05232 iron ABC transporter periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_02773 iron(III) ABC transporter periplasmic-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_05162 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_00460 iron(III) ABC transporter periplasmic-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_05231 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_02774 iron(III)-transport system permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_05163 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_00459 iron(III)-transporter permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_02775 Fe(3+) ions import ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PputUW4_04412 potA3; ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PputUW4_05164 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PputUW4_03039 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PputUW4_02334 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PputUW4_03150 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PputUW4_03041 putrescine transport system permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PputUW4_02335 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PputUW4_03148 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PputUW4_03040 spermidine/putrescine transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein
D PputUW4_02336 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PputUW4_03149 spermidine/putrescine transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein
D PputUW4_02337 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PputUW4_03038 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PputUW4_03147 spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PputUW4_05198 potF1; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_05199 potF2; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02766 putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02054 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_03110 putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_03236 potD2; putrescine ABC transporter periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02908 spermidine/putrescine transport system substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02470 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_01595 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02548 putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_01909 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_05378 potD4; putrescine/polyamine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_05195 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D PputUW4_03109 putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein
D PputUW4_05196 potH; putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein
D PputUW4_03108 putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein
D PputUW4_05197 potG; spermidine/putrescine ABC transporter ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PputUW4_03107 putrescine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PputUW4_00024 choline ABC transporter periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_00302 putative histidine transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_00310 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_04231 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_05033 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_05042 glycine betaine/L-proline ABC transporter periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_01946 ABC transporter periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_03810 glycine/betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_00303 opuAB; Glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PputUW4_05043 glycine betaine/L-proline ABC transporter permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PputUW4_00304 opuAA; glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PputUW4_05044 glycine betaine/L-proline transport ATP-binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PputUW4_00732 glycine betaine/L-proline ABC transporter periplasmic substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PputUW4_00731 glycine betaine/carnitine/choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PputUW4_00733 glycine betaine/carnitine/choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PputUW4_00730 glycine betaine/L-proline transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PputUW4_03370 malK; maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PputUW4_04254 glucose ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PputUW4_03367 malE; maltose/maltodextrin ABC transporter substrate binding periplasmic protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PputUW4_03368 malF; maltose/maltodextrin ABC transporter permease protein MalF K10237 thuF; trehalose/maltose transport system permease protein
D PputUW4_03369 malG; maltose/maltodextrin ABC transporter permease protein K10238 thuG; trehalose/maltose transport system permease protein
D PputUW4_00786 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PputUW4_00037 ABC transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PputUW4_00785 toluene tolerance ABC transporter periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PputUW4_00035 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PputUW4_00784 toluene tolerance ABC efflux transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PputUW4_00787 anti-sigma-factor antagonist (STAS) K07122 mlaB; phospholipid transport system transporter-binding protein
D PputUW4_00036 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PputUW4_00783 toluene tolerance ABC efflux transporter,ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PputUW4_00589 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PputUW4_00595 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D PputUW4_00594 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D PputUW4_00596 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PputUW4_04257 sugar ABC transporter periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PputUW4_04256 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D PputUW4_04255 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D PputUW4_03402 rbsB; ribose ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PputUW4_03400 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D PputUW4_03401 rbsA; ribose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PputUW4_03397 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PputUW4_01308 L-arabinose ABC transporter substrate-binding periplasmic protein K10537 araF; L-arabinose transport system substrate-binding protein
D PputUW4_01310 L-arabinose transporter permease protein K10538 araH; L-arabinose transport system permease protein
D PputUW4_01309 L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D PputUW4_01787 ABC transporter periplasmic protein K17321 glpV; glycerol transport system substrate-binding protein
D PputUW4_01784 ABC transporter permease K17322 glpP; glycerol transport system permease protein
D PputUW4_01785 ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D PputUW4_01782 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D PputUW4_01783 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D PputUW4_01771 OmpA/MotB domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D PputUW4_05364 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PputUW4_05363 pstC; phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D PputUW4_05362 pstA; phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D PputUW4_05361 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PputUW4_03163 phnD; phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D PputUW4_03165 phnE1; phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D PputUW4_03166 phnE2; phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D PputUW4_03164 phnC; phosphonate-transporting ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PputUW4_01155 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein
D PputUW4_02208 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D PputUW4_01156 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein
D PputUW4_02207 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D PputUW4_01153 amino acid ABC transporter ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02209 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_01157 amino acid ABC transporter periplasmic amino acid-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D PputUW4_02206 hisJ; periplasmic histidine-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein
D PputUW4_01023 extracellular solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PputUW4_01021 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D PputUW4_01022 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D PputUW4_01020 ABC transporter-like protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_04458 amino acid ABC transporter periplasmic protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PputUW4_04457 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D PputUW4_04456 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D PputUW4_04455 glnQ; amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_05184 extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_00192 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_00191 cystine transport system permease protein K10009 tcyB; L-cystine transport system permease protein
D PputUW4_00190 cystine transport system ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_04464 lysine-arginine-ornithine-binding periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_04182 ABC transporter periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_03208 lysine-arginine-ornithine-binding periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_02224 arginine/ornithine ABC transporter periplasmic-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_04180 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D PputUW4_02222 arginine/ornithine ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D PputUW4_04181 amino acid ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D PputUW4_02223 arginine/ornithine transport system permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D PputUW4_04178 ABC transporter-like protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02220 histidine transport ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_00250 amino acid ABC transporter, periplasmic amino acid-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D PputUW4_00249 amino acid ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PputUW4_00248 polar amino acid ABC transporter inner membrane subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PputUW4_00251 ABC transporter-like protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_00481 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_01187 branched-chain amino acid ABC transporter periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_02744 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_00482 braD; inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_01186 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_02741 ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_01185 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_02740 ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_00483 braE; high-affinity branched-chain amino acid ABC transporter permease BraE K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_00484 braF; high-affinity branched-chain aminoacidtransportATP-binding protein BraF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_01184 leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_02743 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_01183 ABC transporter-like protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_02742 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_00485 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_00059 metQ1; D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PputUW4_00176 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D PputUW4_00185 metQ2; D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PputUW4_00060 metI1; D-methionine ABC transport system permease K02072 metI; D-methionine transport system permease protein
D PputUW4_00183 metI2; D-methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PputUW4_00061 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D PputUW4_00184 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D PputUW4_00522 urea ABC transporter urea binding protein K11959 urtA; urea transport system substrate-binding protein
D PputUW4_00521 urtB; urea ABC transporter permease protein UrtB K11960 urtB; urea transport system permease protein
D PputUW4_00520 urtC; urea ABC transporter permease protein UrtC K11961 urtC; urea transport system permease protein
D PputUW4_00519 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D PputUW4_00518 urtE; urea ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D PputUW4_00743 nikA1; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00745 nikA2; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00746 nikA3; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_05322 periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00742 nikB; nickel transporter permease K12369 dppB; dipeptide transport system permease protein
D PputUW4_00741 nikC; nickel transporter permease K12370 dppC; dipeptide transport system permease protein
D PputUW4_00740 nikD; nickel import ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D PputUW4_00739 nikE; nickel import ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D PputUW4_02883 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PputUW4_02884 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PputUW4_02379 ABC transporter periplasmic protein K13893 yejA; microcin C transport system substrate-binding protein
D PputUW4_02885 ABC transporter permease K13894 yejB; microcin C transport system permease protein
D PputUW4_02378 peptide ABC transporter permease K13894 yejB; microcin C transport system permease protein
D PputUW4_02886 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PputUW4_02377 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PputUW4_02887 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PputUW4_02376 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PputUW4_04820 btuF; vitamin B12-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D PputUW4_00067 znuA; Zinc ABC transporter periplasmic protein K09815 znuA; zinc transport system substrate-binding protein
D PputUW4_01505 ABC transporter periplasmic protein K09815 znuA; zinc transport system substrate-binding protein
D PputUW4_00064 znuB; zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D PputUW4_01503 ABC transporter permease K09816 znuB; zinc transport system permease protein
D PputUW4_00065 znuC; Zinc import ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PputUW4_01504 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PputUW4_01527 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D PputUW4_01526 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PputUW4_03502 lolCE1; LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PputUW4_03504 lolCE2; LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PputUW4_03503 lolD; lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PputUW4_03837 ccmD; cytochrome c-type biogenesis protein K02196 ccmD; heme exporter protein D
D PputUW4_03838 ccmC; cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D PputUW4_03839 ccmB; cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D PputUW4_03840 ccmA; cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PputUW4_00954 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D PputUW4_00955 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D PputUW4_00778 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PputUW4_05133 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PputUW4_05134 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PputUW4_00412 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PputUW4_03983 multidrug ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PputUW4_00116 type I secretion system ATPase family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PputUW4_03952 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PputUW4_01721 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PputUW4_02633 prtD; type I secretion system ATPase PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PputUW4_01573 Macrolide ABC transporter ATP-binding protein/permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PputUW4_01567 pvdE; pyoverdine biosynthesis protein PvdE K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D PputUW4_00750 ABC transporter-like protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ppuu02060]
D PputUW4_00966 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PputUW4_00719 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PputUW4_00967 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PputUW4_00721 fruA; PTS system fructose-specific transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PputUW4_00720 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PputUW4_05172 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PputUW4_00773 phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D PputUW4_00775 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ppuu03070]
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_03616 prgI; type III secretion cytoplasmic protein K03221 yscF; type III secretion protein F
D PputUW4_03634 invA; invasion protein K03230 yscV; type III secretion protein V
D PputUW4_03629 spaO; surface presentation of antigens protein K03225 yscQ; type III secretion protein Q
D PputUW4_03285 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D PputUW4_03298 gspF; type II secretion system protein K02455 gspF; general secretion pathway protein F
D PputUW4_03297 gspG2; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PputUW4_03283 type II secretion system protein G K02456 gspG; general secretion pathway protein G
D PputUW4_03284 type II secretory pathway pseudopilin PulG-like protein K02456 gspG; general secretion pathway protein G
D PputUW4_05224 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PputUW4_03290 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PputUW4_00920 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PputUW4_00921 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PputUW4_04897 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PputUW4_00703 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PputUW4_04864 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PputUW4_00919 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PputUW4_05440 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PputUW4_04316 secA2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PputUW4_05135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PputUW4_00279 secB; preprotein translocase subunit K03071 secB; preprotein translocase subunit SecB
D PputUW4_04434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PputUW4_00321 tatA; sec-independent translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D PputUW4_00320 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PputUW4_00319 tatC; Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D PputUW4_01750 vgrG2; Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_00562 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_03279 vgrG3; type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_03083 vgrG1; type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_03085 hcp; type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D PputUW4_03073 tssJ; type VI secretion lipoprotein K11906 vasD; type VI secretion system protein VasD
D PputUW4_03077 tssM; ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL
D PputUW4_03087 tssL; DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D PputUW4_03084 clpV; ClpV1 family type VI secretion ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ppuu02020]
D PputUW4_05355 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PputUW4_05354 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PputUW4_00393 phoD1; phosphodiesterase/alkaline phosphatase D-like protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PputUW4_00722 phoD2; putative exported alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PputUW4_01771 OmpA/MotB domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D PputUW4_05364 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PputUW4_04127 phoQ; sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PputUW4_04128 phoP; DNA-binding response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PputUW4_00206 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PputUW4_00205 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PputUW4_03930 two component transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PputUW4_04131 rstB; sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PputUW4_04132 rstA; DNA-binding response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D PputUW4_01281 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PputUW4_05001 creC; sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D PputUW4_05002 creB; DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D PputUW4_02813 multidrug efflux system inner membrane protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D PputUW4_02812 multidrug efflux system transmembrane protein K07788 mdtB; multidrug efflux pump
D PputUW4_02811 multidrug efflux system transmembrane protein K07789 mdtC; multidrug efflux pump
D PputUW4_02046 czcS; heavy metal sensor signal transduction histidine kinase (STHK) K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_04494 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_03501 cinS; heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_02047 czcR; two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_04493 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_03500 cinR; two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_02689 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_01498 periplasmic sensor Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_02690 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PputUW4_01497 qseB; two component transcriptional regulatorn QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D PputUW4_03887 flagellin K02406 fliC; flagellin
D PputUW4_03858 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PputUW4_03853 motA2; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PputUW4_00438 motA1; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PputUW4_01394 kdpD; osmosensitive K+ channel Signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PputUW4_01395 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PputUW4_01391 kdpA; potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PputUW4_01392 kdpB; potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PputUW4_01393 kdpC; potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PputUW4_01390 K+-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit
D PputUW4_01272 periplasmic sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PputUW4_01271 tctD; DNA-binding response regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D PputUW4_01268 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PputUW4_02051 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PputUW4_03999 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PputUW4_01269 tctB; tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D PputUW4_02050 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PputUW4_03998 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PputUW4_01270 tctC; tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D PputUW4_02049 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PputUW4_03997 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PputUW4_00056 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PputUW4_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D PputUW4_01143 transmembrane acid tolerance protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PputUW4_04307 oprD3; outer membrane protein D K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PputUW4_01861 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PputUW4_04110 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PputUW4_04111 two component transcriptional regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D PputUW4_05276 algR; two-component response regulator AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR
D PputUW4_04471 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D PputUW4_04447 LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PputUW4_04112 gacS; multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PputUW4_02386 gacA; DNA-binding response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PputUW4_03408 csrA2; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_01334 csrA1; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_04163 csrA3; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_01449 multi-sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PputUW4_01581 Hpt sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PputUW4_04400 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01580 putative transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01450 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01636 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PputUW4_00570 PAS/PAC sensor signal transduction histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D PputUW4_04078 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PputUW4_04075 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PputUW4_04065 cpaC; Flp pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D PputUW4_04071 cpaE; Flp pilus assembly protein, ATPase CpaE K02282 cpaE; pilus assembly protein CpaE
D PputUW4_04070 cpaF; Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PputUW4_04069 tadB; Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PputUW4_04068 tadC; Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PputUW4_04066 TPR domain-containing protein K27079 tadD; tight adherence protein D
D PputUW4_01086 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PputUW4_00283 ntrB; Signal transduction histidine kinase,nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PputUW4_00282 ntrC; nitrogen metabolism transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PputUW4_05201 glnA5; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_05203 glnA6; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03105 puuA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03244 glnA3; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04145 glnA4; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00285 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01890 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_02765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01296 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04628 two-component response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D PputUW4_04595 short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00232 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PputUW4_04342 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PputUW4_00231 sigma-54 dependent DNA-binding response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PputUW4_04343 sigma-54 dependent DNA-binding response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PputUW4_04697 dctA3; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_02987 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_04125 dctA2; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_03375 dctA1; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_04656 pilR; two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D PputUW4_00777 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PputUW4_04640 pilA; type IV pilus protein PilA K02650 pilA; type IV pilus assembly protein PilA
D PputUW4_00079 kinB; alginate biosynthesis sensor protein K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D PputUW4_00080 algB; alginate biosynthesis transcriptional regulatory protein K11384 algB; two-component system, NtrC family, response regulator AlgB
D PputUW4_02522 chemotaxis protein methyltransferase, CheR-like protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PputUW4_04138 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PputUW4_00576 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04549 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00629 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02226 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04593 chemotaxis sensory transducer, Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00716 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01613 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04081 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02571 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04207 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00294 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00300 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00317 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01899 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02634 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04230 Pas/Pac sensor-containing chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01939 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04270 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00385 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04319 chemotaxis sensory transducer, Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_03556 aer; aerotaxis receptor K03776 aer; aerotaxis receptor
D PputUW4_03849 cheW1; purine-binding chemotaxis protein CheW1 K03408 cheW; purine-binding chemotaxis protein CheW
D PputUW4_03850 cheW2; CheW domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D PputUW4_03855 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PputUW4_03857 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PputUW4_02523 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_03854 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_00847 cheV1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_04139 cheV3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_01469 cheV2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_05102 pilJ; type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ
D PputUW4_05103 pilI; type IV pilus biogenesis protein PilI K02659 pilI; twitching motility protein PilI
D PputUW4_05101 pilL; type IV pili sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PputUW4_05105 pilG; type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PputUW4_05104 pilH; type IV pilus response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PputUW4_05100 chpC; chemosensory protein ChpC K06598 chpC; chemosensory pili system protein ChpC
D PputUW4_01042 wspC; chemotaxis protein methyltransferase WspC K13486 wspC; chemotaxis protein methyltransferase WspC
D PputUW4_01040 wspA; methyl-accepting chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D PputUW4_01041 wspB; chemotaxis signal transduction protein K13488 wspB; chemotaxis-related protein WspB
D PputUW4_01043 wspD; chemotaxis signal transduction protein K13489 wspD; chemotaxis-related protein WspD
D PputUW4_01044 wspE; Sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PputUW4_01045 wspF; chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D PputUW4_01046 wspR; response regulator WspR K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D PputUW4_02525 cheY1; chemotaxis protein CheY K13589 cpdR; two-component system, cell cycle response regulator CpdR
D PputUW4_03882 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PputUW4_03881 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PputUW4_03880 atoC; Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D PputUW4_01019 periplasmic sensor signal transduction histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D PputUW4_01018 two component, sigma-54 specific, Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D PputUW4_01020 ABC transporter-like protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_01021 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D PputUW4_01022 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D PputUW4_01023 extracellular solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PputUW4_03404 ansB; glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PputUW4_04915 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_00159 crp; cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_04016 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_00748 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PputUW4_00749 two component Fis family transcriptional regulator K15012 regA; two-component system, response regulator RegA
D PputUW4_04524 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PputUW4_04523 petB; cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PputUW4_04522 petC; ubiquinol--cytochrome C reductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PputUW4_01878 cytochrome c2 K08738 CYC; cytochrome c
D PputUW4_04365 hypothetical protein K08738 CYC; cytochrome c
D PputUW4_03558 ccoN1; cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PputUW4_03562 ccoN2; cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PputUW4_03559 ccoO1; cytochrome c oxidase cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PputUW4_03563 ccoO2; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PputUW4_03560 ccoQ1; cytochrome-c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PputUW4_03564 ccoQ2; cytochrome c oxidase, cbb3-type, CcoQ subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PputUW4_03561 ccoP1; cytochrome c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PputUW4_03565 ccoP2; cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PputUW4_03055 cydA1; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PputUW4_04711 cydA2; cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PputUW4_03054 cydB1; cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PputUW4_04710 cydB2; cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_01983 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PputUW4_03551 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D PputUW4_03536 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PputUW4_04048 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PputUW4_03537 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PputUW4_01377 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PputUW4_02896 ECF subfamily RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PputUW4_04994 fecI5; RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PputUW4_03434 fecI2; ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PputUW4_02897 sigma factor regulatory protein FecR/PupR family K07165 fecR; transmembrane sensor
D PputUW4_03433 fecR3; FecR protein K07165 fecR; transmembrane sensor
D PputUW4_00837 FecR family protein K07165 fecR; transmembrane sensor
D PputUW4_02455 fecR2; anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor
D PputUW4_01600 fecR1; anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor
D PputUW4_04995 fecR5; FecR protein K07165 fecR; transmembrane sensor
D PputUW4_04266 fecR4; sigma factor regulatory protein FecR K07165 fecR; transmembrane sensor
D PputUW4_01445 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PputUW4_04098 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_02954 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_03871 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D PputUW4_03872 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PputUW4_03873 anti-sigma-factor antagonist (STAS) K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D PputUW4_04141 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:ppuu04148]
D PputUW4_00729 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PputUW4_03070 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PputUW4_04524 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ppuu02024]
D PputUW4_00452 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PputUW4_04921 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PputUW4_04919 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PputUW4_02383 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PputUW4_01415 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PputUW4_01434 3-deoxy-D-arabino-heptulosonate-7-phosphatesynthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PputUW4_02689 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_01498 periplasmic sensor Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_02690 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PputUW4_01497 qseB; two component transcriptional regulatorn QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D PputUW4_01395 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PputUW4_01036 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_02761 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_04353 potD3; spermidine/putrescine ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_03229 potD1; polyamine ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_03733 ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_00874 polyamine ABC transporter periplasmic polyamine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_03156 binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_04927 ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_01033 binding-protein dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_04351 potC2; spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_03231 potB1; polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_03736 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_00872 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_04925 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_01034 binding-protein dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_04352 potB2; spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_03230 potC1; polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_03735 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_00873 polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_04926 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_01035 spermidine/putrescine ABC transporter ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_04350 potA2; spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_03232 potA1; polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_03737 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_00875 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_04928 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_00481 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_01187 branched-chain amino acid ABC transporter periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_02744 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_00482 braD; inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_01186 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_02741 ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_01185 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_02740 ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_00483 braE; high-affinity branched-chain amino acid ABC transporter permease BraE K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_00484 braF; high-affinity branched-chain aminoacidtransportATP-binding protein BraF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_01184 leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_02743 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_01183 ABC transporter-like protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_02742 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_00485 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_03950 VCBS protein K20276 bapA; large repetitive protein
D PputUW4_04241 fadD1; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04242 fadD2; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04092 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04915 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_00159 crp; cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_04016 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_00066 zur; ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PputUW4_04822 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PputUW4_04830 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PputUW4_01211 multidrug efflux RND outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D PputUW4_05440 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PputUW4_04897 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PputUW4_00703 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PputUW4_04864 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PputUW4_00919 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PputUW4_04316 secA2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PputUW4_05135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PputUW4_00279 secB; preprotein translocase subunit K03071 secB; preprotein translocase subunit SecB
D PputUW4_04434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa [PATH:ppuu02025]
D PputUW4_05102 pilJ; type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ
D PputUW4_05103 pilI; type IV pilus biogenesis protein PilI K02659 pilI; twitching motility protein PilI
D PputUW4_05101 pilL; type IV pili sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PputUW4_05100 chpC; chemosensory protein ChpC K06598 chpC; chemosensory pili system protein ChpC
D PputUW4_05104 pilH; type IV pilus response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PputUW4_05105 pilG; type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PputUW4_00426 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PputUW4_04915 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_00159 crp; cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_04016 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_03882 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PputUW4_04921 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PputUW4_04919 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PputUW4_04112 gacS; multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PputUW4_04757 periplasmic sensor hybrid histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D PputUW4_00545 periplasmic sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS
D PputUW4_02386 gacA; DNA-binding response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PputUW4_03408 csrA2; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_01334 csrA1; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_04163 csrA3; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_01445 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PputUW4_04098 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_02954 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_03871 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D PputUW4_03872 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PputUW4_03873 anti-sigma-factor antagonist (STAS) K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D PputUW4_04141 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PputUW4_03858 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PputUW4_03077 tssM; ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL
D PputUW4_03088 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ
D PputUW4_03090 tssB; type VI secretion protein K11901 impB; type VI secretion system protein ImpB
D PputUW4_03089 tssC; EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC
D PputUW4_03085 hcp; type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D PputUW4_03074 type VI secretion protein K11895 impH; type VI secretion system protein ImpH
D PputUW4_03084 clpV; ClpV1 family type VI secretion ATPase K11907 vasG; type VI secretion system protein VasG
D PputUW4_01040 wspA; methyl-accepting chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D PputUW4_01044 wspE; Sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PputUW4_01041 wspB; chemotaxis signal transduction protein K13488 wspB; chemotaxis-related protein WspB
D PputUW4_01043 wspD; chemotaxis signal transduction protein K13489 wspD; chemotaxis-related protein WspD
D PputUW4_01045 wspF; chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D PputUW4_01046 wspR; response regulator WspR K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D PputUW4_04339 diguanylate cyclase K21019 sadC; diguanylate cyclase [EC:2.7.7.65]
D PputUW4_02809 diguanylate cyclase/phosphodiesterase K21023 mucR; diguanylate cyclase [EC:2.7.7.65]
D PputUW4_04373 diguanylate cyclase/phosphodiesterase K21024 bifA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PputUW4_04482 algA; bifunctional protein mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_01528 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PputUW4_04473 alg44; alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ppuu02030]
D PputUW4_00576 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04549 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00629 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02226 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04593 chemotaxis sensory transducer, Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00716 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01613 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04081 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02571 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04207 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00294 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00300 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00317 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01899 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02634 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04230 Pas/Pac sensor-containing chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01939 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04270 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00385 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04319 chemotaxis sensory transducer, Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_03556 aer; aerotaxis receptor K03776 aer; aerotaxis receptor
D PputUW4_03402 rbsB; ribose ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PputUW4_00743 nikA1; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00745 nikA2; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00746 nikA3; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_05322 periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_03855 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PputUW4_03849 cheW1; purine-binding chemotaxis protein CheW1 K03408 cheW; purine-binding chemotaxis protein CheW
D PputUW4_03850 cheW2; CheW domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D PputUW4_03857 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PputUW4_03856 cheZ; chemotaxis phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D PputUW4_02523 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_03854 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_00847 cheV1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_04139 cheV3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_01469 cheV2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_02522 chemotaxis protein methyltransferase, CheR-like protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PputUW4_04138 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PputUW4_03877 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PputUW4_03868 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PputUW4_03867 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PputUW4_03853 motA2; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PputUW4_00438 motA1; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PputUW4_03852 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PputUW4_00439 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ppuu02040]
D PputUW4_03879 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PputUW4_03878 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PputUW4_03877 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PputUW4_03876 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D PputUW4_03875 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PputUW4_03874 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D PputUW4_03870 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PputUW4_05242 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL
D PputUW4_03869 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PputUW4_03868 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PputUW4_03867 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PputUW4_03866 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PputUW4_03865 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PputUW4_03864 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PputUW4_03863 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PputUW4_03861 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PputUW4_03862 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PputUW4_04140 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PputUW4_04137 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PputUW4_04136 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PputUW4_04135 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PputUW4_04134 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PputUW4_03911 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PputUW4_03910 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PputUW4_03909 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PputUW4_03908 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PputUW4_03907 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PputUW4_03906 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PputUW4_03905 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PputUW4_04403 OmpA family outer membrane protein K21218 motY; sodium-type flagellar protein MotY
D PputUW4_03887 flagellin K02406 fliC; flagellin
D PputUW4_03885 fliD; flagellar hook associated protein K02407 fliD; flagellar hook-associated protein 2
D PputUW4_03884 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PputUW4_03883 hypothetical protein K02423 fliT; flagellar protein FliT
D PputUW4_03853 motA2; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PputUW4_00438 motA1; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PputUW4_03852 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PputUW4_00439 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PputUW4_04141 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PputUW4_04142 flgN; flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PputUW4_05184 extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_00192 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_04952 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PputUW4_03882 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PputUW4_00777 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PputUW4_03880 atoC; Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D PputUW4_03858 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PputUW4_01108 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ppuu04980]
D PputUW4_04312 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PputUW4_02354 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ppuu01501]
D PputUW4_04307 oprD3; outer membrane protein D K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PputUW4_01147 AmpG-related permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PputUW4_03514 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PputUW4_01636 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PputUW4_02439 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01213 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_04378 RND family multidrug transporter membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01212 multidrug efflux RND inner membrane transporter K18138 acrB; multidrug efflux pump
D PputUW4_04379 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D PputUW4_02438 multidrug efflux system transmembrane protein K18138 acrB; multidrug efflux pump
D PputUW4_01211 multidrug efflux RND outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_00343 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PputUW4_01522 mrdA1; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PputUW4_04783 mrdA2; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PputUW4_04509 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ppuu01502]
D PputUW4_01861 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PputUW4_04501 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_04591 ddlA; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_05308 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PputUW4_04507 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PputUW4_04506 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PputUW4_04503 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppuu01503]
D PputUW4_04127 phoQ; sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PputUW4_04128 phoP; DNA-binding response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PputUW4_01297 transmembrane sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PputUW4_03930 two component transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PputUW4_00449 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PputUW4_01281 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PputUW4_00074 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PputUW4_03982 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PputUW4_02439 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01213 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_04378 RND family multidrug transporter membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01212 multidrug efflux RND inner membrane transporter K18138 acrB; multidrug efflux pump
D PputUW4_04379 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D PputUW4_02438 multidrug efflux system transmembrane protein K18138 acrB; multidrug efflux pump
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_01100 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PputUW4_01143 transmembrane acid tolerance protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ppuu01000]
C 01001 Protein kinases [BR:ppuu01001]
D PputUW4_00577 protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PputUW4_00161 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PputUW4_00213 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PputUW4_03537 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PputUW4_05355 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PputUW4_04127 phoQ; sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PputUW4_00206 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PputUW4_04131 rstB; sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PputUW4_05001 creC; sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D PputUW4_02046 czcS; heavy metal sensor signal transduction histidine kinase (STHK) K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_04494 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_03501 cinS; heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_02689 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_01498 periplasmic sensor Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_01394 kdpD; osmosensitive K+ channel Signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PputUW4_01272 periplasmic sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PputUW4_04110 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PputUW4_02441 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PputUW4_03932 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PputUW4_04112 gacS; multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PputUW4_01449 multi-sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PputUW4_01581 Hpt sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PputUW4_00570 PAS/PAC sensor signal transduction histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D PputUW4_03189 two-component sensory histidine protein kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PputUW4_01467 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PputUW4_00283 ntrB; Signal transduction histidine kinase,nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PputUW4_00232 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PputUW4_04342 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PputUW4_00079 kinB; alginate biosynthesis sensor protein K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D PputUW4_03855 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PputUW4_05101 pilL; type IV pili sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PputUW4_01044 wspE; Sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PputUW4_03881 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PputUW4_00748 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PputUW4_01445 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PputUW4_04098 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_02954 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_04757 periplasmic sensor hybrid histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D PputUW4_00545 periplasmic sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS
C 01009 Protein phosphatases and associated proteins [BR:ppuu01009]
D PputUW4_05078 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PputUW4_03790 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PputUW4_00434 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PputUW4_03670 HAD family hydrolase K17623 PUDP; pseudouridine 5'-phosphatase [EC:3.1.3.96]
C 01002 Peptidases and inhibitors [BR:ppuu01002]
D PputUW4_04667 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PputUW4_04642 pilD; type IV pilus prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PputUW4_04077 cpaA; Flp pilus assembly protein, protease CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PputUW4_00980 guaA1; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PputUW4_03106 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D PputUW4_03437 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PputUW4_00352 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PputUW4_05423 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PputUW4_00968 sugar isomerase (SIS) domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PputUW4_01338 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PputUW4_01913 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D PputUW4_01238 pfpI; peptidase C56, PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D PputUW4_04713 protease K03152 thiJ; protein deglycase [EC:3.5.1.124]
D PputUW4_01540 isonitrile hydratase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D PputUW4_01412 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D PputUW4_03482 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PputUW4_03535 abortive infection protein K07052 K07052; CAAX protease family protein
D PputUW4_02866 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PputUW4_00041 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PputUW4_01861 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PputUW4_05136 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PputUW4_05137 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PputUW4_00953 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PputUW4_05027 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PputUW4_01570 pvdM; dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PputUW4_01076 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PputUW4_02205 hipO; hippurate hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D PputUW4_01087 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PputUW4_05235 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PputUW4_01514 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PputUW4_00699 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PputUW4_01440 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PputUW4_01282 peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PputUW4_00144 peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PputUW4_01095 rseP; membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PputUW4_04806 hypothetical protein K09933 mtfA; MtfA peptidase
D PputUW4_01908 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D PputUW4_01281 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PputUW4_00793 peptidase S1 and S6, chymotrypsin/Hap K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PputUW4_00217 extracellular serine protease K01342 aprE; subtilisin [EC:3.4.21.62]
D PputUW4_04015 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PputUW4_04779 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PputUW4_01707 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D PputUW4_03606 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PputUW4_01710 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PputUW4_01712 lon2; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PputUW4_00988 lon1; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PputUW4_02327 lexA1; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PputUW4_03516 lexA2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PputUW4_00957 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PputUW4_00312 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PputUW4_02191 alpha/beta hydrolase fold protein K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D PputUW4_03740 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PputUW4_00274 carboxy-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PputUW4_05192 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PputUW4_04039 sppA; signal peptide peptidase A K04773 sppA; protease IV [EC:3.4.21.-]
D PputUW4_02347 putative periplasmic protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PputUW4_02869 rhomboid-like protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PputUW4_04775 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PputUW4_00336 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PputUW4_04590 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_01850 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PputUW4_01642 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PputUW4_03023 peptidase U32 K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D PputUW4_00772 pmbA; PmbA protein K03592 pmbA; PmbA protein
D PputUW4_00770 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D PputUW4_02509 ecotin K08276 eco; ecotin
D PputUW4_04811 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D PputUW4_05409 SPFH domain-containing protein K04087 hflC; modulator of FtsH protease HflC
D PputUW4_00455 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D PputUW4_00454 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ppuu01003]
D PputUW4_04320 glycosyl transferase, group 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PputUW4_02789 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PputUW4_05130 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PputUW4_04616 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PputUW4_00343 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PputUW4_04472 alg8; alginate biosynthesis protein Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D PputUW4_00315 glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D PputUW4_02168 cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppuu01005]
D PputUW4_01100 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PputUW4_01101 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PputUW4_04497 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PputUW4_01098 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PputUW4_01777 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PputUW4_04051 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PputUW4_00010 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PputUW4_03724 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PputUW4_04002 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D PputUW4_02500 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D PputUW4_00419 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PputUW4_04573 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PputUW4_01297 transmembrane sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PputUW4_01107 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PputUW4_04049 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PputUW4_00781 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PputUW4_00782 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PputUW4_00398 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PputUW4_00397 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PputUW4_00399 rfaG; lipopolysaccharide core biosynthesis protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PputUW4_00400 rfaP; lipopolysaccharide kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D PputUW4_02477 membrane protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PputUW4_00410 glycosyl transferase group 2 family protein K12988 wapR; alpha-1,3-rhamnosyltransferase [EC:2.4.1.-]
D PputUW4_04518 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PputUW4_00006 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PputUW4_00413 rfaE; bifunctional heptose 7-phosphate kinase/heptose1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PputUW4_01379 glycosyl transferase family protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D PputUW4_01367 chain length determinant family protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D PputUW4_01006 bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppuu01011]
D PputUW4_00789 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PputUW4_04047 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PputUW4_04502 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PputUW4_04505 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PputUW4_04508 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PputUW4_04501 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_04591 ddlA; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PputUW4_05308 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PputUW4_04574 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PputUW4_04775 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PputUW4_04506 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PputUW4_04503 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PputUW4_02492 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PputUW4_04670 mviN; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PputUW4_00343 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PputUW4_04616 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PputUW4_01522 mrdA1; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PputUW4_04783 mrdA2; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PputUW4_04509 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PputUW4_04779 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PputUW4_03606 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PputUW4_01707 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D PputUW4_05130 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PputUW4_01412 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D PputUW4_03482 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PputUW4_01861 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PputUW4_03527 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PputUW4_05072 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PputUW4_04781 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PputUW4_04774 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PputUW4_02882 membrane-bound lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PputUW4_00962 mltF; Membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PputUW4_04029 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PputUW4_00759 rlpA1; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PputUW4_04780 rlpA2; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PputUW4_00449 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PputUW4_00077 amiD1; N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PputUW4_00714 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ppuu01004]
D PputUW4_04034 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PputUW4_03890 fabH1; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PputUW4_00361 fabB1; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PputUW4_04100 fabB2; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PputUW4_00358 fabF1; 3-oxoacyl-[acyl carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_01383 fabF2; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_04031 fabF3; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PputUW4_03669 fabG5; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00359 fabG1; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02063 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04390 fabG8; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02296 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_01652 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_00574 fabG2; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_02236 fabG3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04033 fabG6; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_03034 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PputUW4_04099 fabA2; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PputUW4_01099 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PputUW4_02888 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PputUW4_01409 acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PputUW4_04730 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PputUW4_05366 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PputUW4_00151 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PputUW4_04183 acsA2; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02231 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_04635 acsA3; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02462 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02570 acsA1; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PputUW4_02372 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D PputUW4_02750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PputUW4_03695 acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D PputUW4_04241 fadD1; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04242 fadD2; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04092 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_01766 long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PputUW4_02150 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PputUW4_01072 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PputUW4_04035 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PputUW4_04948 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PputUW4_03680 plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PputUW4_00005 plsC1; phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ppuu01008]
D PputUW4_01501 mbtH; MbtH-like protein K05375 mbtH; MbtH protein
D PputUW4_04130 entD; 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01006 Prenyltransferases [BR:ppuu01006]
D PputUW4_04817 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PputUW4_04677 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PputUW4_01092 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PputUW4_00451 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PputUW4_05352 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PputUW4_00057 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00855 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ppuu01007]
D PputUW4_03465 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PputUW4_01779 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PputUW4_04625 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PputUW4_04901 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PputUW4_04535 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PputUW4_01780 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PputUW4_00338 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PputUW4_04392 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PputUW4_04668 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PputUW4_04438 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PputUW4_04770 leuS2; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_01812 leuS1; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_01048 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PputUW4_04300 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PputUW4_00940 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PputUW4_00008 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PputUW4_00007 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PputUW4_01834 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PputUW4_01146 proS1; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PputUW4_03053 proS2; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PputUW4_03390 thrS1; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PputUW4_05403 thrS2; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PputUW4_04165 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PputUW4_03386 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PputUW4_03385 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PputUW4_03334 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_03915 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PputUW4_01441 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PputUW4_04222 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D PputUW4_03469 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PputUW4_00944 putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D PputUW4_02748 aspartate transaminase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PputUW4_02429 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PputUW4_03176 aspartate aminotransferase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_01085 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D PputUW4_01361 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_00792 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_01810 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PputUW4_04982 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PputUW4_02555 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PputUW4_00600 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PputUW4_00147 gabT1; 4-aminobutyrate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PputUW4_00886 argD1; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PputUW4_04972 aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PputUW4_04175 argD2; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D PputUW4_01500 pvdH; diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PputUW4_05200 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PputUW4_04745 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PputUW4_05087 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PputUW4_04760 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PputUW4_00866 ilvE1; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_02966 ilvE2; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PputUW4_01746 phnW1; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PputUW4_02575 phnW2; 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PputUW4_01359 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PputUW4_01369 rffA; lipopolysaccharide biosynthesis protein RffA K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D PputUW4_03899 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:ppuu00199]
C 00194 Photosynthesis proteins [BR:ppuu00194]
D PputUW4_05426 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PputUW4_05427 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PputUW4_05428 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PputUW4_05429 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PputUW4_05430 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PputUW4_05431 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PputUW4_05432 atpE; ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PputUW4_05433 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PputUW4_05434 atpI; ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ppuu03000]
D PputUW4_04188 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PputUW4_02726 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D PputUW4_04362 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PputUW4_04220 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D PputUW4_02602 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PputUW4_02707 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PputUW4_00840 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PputUW4_02270 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PputUW4_03309 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PputUW4_02402 O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PputUW4_02905 DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PputUW4_03211 ftrA; transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D PputUW4_05032 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D PputUW4_04177 AraC family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D PputUW4_02099 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D PputUW4_05039 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D PputUW4_04356 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_02052 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_00834 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_01737 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_02910 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_00876 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_02647 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_02211 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_00478 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_00499 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_02107 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_05300 gcvA2; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_02194 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PputUW4_01015 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PputUW4_01700 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D PputUW4_05343 oxyR; oxidative stress regulatory protein OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PputUW4_04368 iciA; chromosome replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PputUW4_04973 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PputUW4_01421 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PputUW4_03379 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D PputUW4_05090 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D PputUW4_02204 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D PputUW4_01997 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D PputUW4_02537 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_01291 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_03308 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_01928 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_02451 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D PputUW4_03326 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D PputUW4_05372 LysR family regulatory protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D PputUW4_00599 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D PputUW4_01852 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D PputUW4_02578 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D PputUW4_05165 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D PputUW4_05385 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D PputUW4_03262 catR; transcriptional activator CatR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D PputUW4_02344 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D PputUW4_00094 trpI; HTH-type transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D PputUW4_04417 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PputUW4_03399 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PputUW4_02434 LacI family transcription regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D PputUW4_00718 fruR; DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PputUW4_04226 LacI family transcription regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PputUW4_00298 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PputUW4_00970 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PputUW4_02316 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D PputUW4_02985 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D PputUW4_05251 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PputUW4_00681 Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PputUW4_04698 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PputUW4_00751 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PputUW4_02836 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PputUW4_02260 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PputUW4_02686 MocR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PputUW4_05379 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PputUW4_03201 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D PputUW4_05046 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PputUW4_01214 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D PputUW4_00598 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PputUW4_02931 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PputUW4_03816 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PputUW4_04198 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D PputUW4_02158 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PputUW4_02919 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PputUW4_01384 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PputUW4_01519 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PputUW4_01065 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D PputUW4_00494 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D PputUW4_01479 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D PputUW4_05412 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_04752 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_05311 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_02310 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_04736 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_02961 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_05222 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PputUW4_02586 LuxR family ATP-dependent transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PputUW4_04540 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PputUW4_02081 ATP-dependent transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PputUW4_00823 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PputUW4_00132 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PputUW4_03943 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PputUW4_01428 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PputUW4_01444 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PputUW4_02697 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PputUW4_01561 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_00578 cueR; MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_03359 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_00610 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_02975 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PputUW4_00813 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PputUW4_04569 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PputUW4_00687 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PputUW4_00066 zur; ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PputUW4_04726 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PputUW4_01199 pcaR; Pca regulon regulatory protein PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D PputUW4_03002 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D PputUW4_04915 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_00159 crp; cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_04016 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PputUW4_03572 Crp/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PputUW4_02287 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PputUW4_00927 BadM/Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PputUW4_02251 arsR; arsenic resistance transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PputUW4_01876 protein-tyrosine-phosphatase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PputUW4_05387 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PputUW4_04251 hexR; DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PputUW4_04900 birA; bifunctional protein biotin operon repressor/biotin-[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PputUW4_00548 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PputUW4_00634 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PputUW4_00160 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PputUW4_03882 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PputUW4_01781 sigma 54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D PputUW4_04799 acoR; sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D PputUW4_00848 anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D PputUW4_02427 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D PputUW4_04985 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D PputUW4_04463 hypothetical protein K21829 dauR; D-arginine utilization repressor
D PputUW4_00242 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator
D PputUW4_00856 hypothetical protein K07726 K07726; putative transcriptional regulator
D PputUW4_01881 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D PputUW4_00387 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PputUW4_03488 relB; bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PputUW4_02658 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D PputUW4_01345 bolA; transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PputUW4_05435 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PputUW4_03538 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D PputUW4_03912 tyrR2; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PputUW4_01865 tyrR1; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PputUW4_04279 tyrR3; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PputUW4_03619 hilA; invasion protein regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D PputUW4_01286 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D PputUW4_01725 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D PputUW4_05282 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D PputUW4_05110 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PputUW4_05380 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D PputUW4_05108 hypothetical protein K07735 algH; putative transcriptional regulator
D PputUW4_04624 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PputUW4_01938 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D PputUW4_04831 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PputUW4_04512 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ppuu03021]
D PputUW4_02552 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PputUW4_04859 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PputUW4_04891 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PputUW4_04890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PputUW4_05335 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PputUW4_04952 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PputUW4_01119 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PputUW4_01278 algU; RNA polymerase sigma factor AlgU K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PputUW4_03647 sigX; RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PputUW4_04215 ECF subfamily RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PputUW4_02444 RNA polymerase sigma factor protein (sigma-24) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PputUW4_02896 ECF subfamily RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PputUW4_04994 fecI5; RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PputUW4_03434 fecI2; ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PputUW4_05132 rpoH; RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D PputUW4_00777 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PputUW4_03858 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PputUW4_01194 hepA; ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PputUW4_00705 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PputUW4_04826 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PputUW4_04896 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PputUW4_04521 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D PputUW4_04520 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B
D PputUW4_02101 sensory box histidine kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PputUW4_03494 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PputUW4_01279 mucA; sigma factor algU negative regulatory protein MucA K03597 rseA; sigma-E factor negative regulatory protein RseA
D PputUW4_01280 mucB; sigma factor algU regulatory protein MucB K03598 rseB; sigma-E factor negative regulatory protein RseB
D PputUW4_04624 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PputUW4_01938 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D PputUW4_00695 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PputUW4_01406 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D PputUW4_04688 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D PputUW4_05249 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ppuu03019]
D PputUW4_04042 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PputUW4_00767 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PputUW4_00958 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PputUW4_00461 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PputUW4_00444 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PputUW4_04460 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PputUW4_05081 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PputUW4_04734 rhlE; ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PputUW4_01437 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PputUW4_03944 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PputUW4_00218 recQ1; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PputUW4_01108 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PputUW4_00710 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PputUW4_05249 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PputUW4_00690 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PputUW4_04386 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PputUW4_00452 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PputUW4_05257 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PputUW4_03091 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PputUW4_04629 pcnB; Poly(A) polymerase, PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PputUW4_05173 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PputUW4_03408 csrA2; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_01334 csrA1; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_04163 csrA3; carbon storage regulator K03563 csrA; carbon storage regulator
D PputUW4_03651 rraA; ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A
D PputUW4_00774 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D PputUW4_03988 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PputUW4_04748 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ppuu03011]
D PputUW4_01364 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PputUW4_01088 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PputUW4_04878 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PputUW4_04860 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PputUW4_04867 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PputUW4_00463 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PputUW4_04888 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PputUW4_04870 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PputUW4_04525 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PputUW4_04885 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PputUW4_04861 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PputUW4_04889 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PputUW4_04862 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PputUW4_04871 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PputUW4_00709 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PputUW4_04433 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PputUW4_04875 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PputUW4_00464 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PputUW4_04880 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PputUW4_04671 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PputUW4_04950 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PputUW4_04894 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PputUW4_04881 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PputUW4_04884 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PputUW4_04883 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PputUW4_04872 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PputUW4_04869 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PputUW4_00466 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PputUW4_04893 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PputUW4_04895 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PputUW4_04892 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PputUW4_04526 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PputUW4_04874 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PputUW4_04865 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PputUW4_04877 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PputUW4_04858 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PputUW4_04868 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PputUW4_04430 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PputUW4_03387 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PputUW4_04676 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PputUW4_04879 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PputUW4_04882 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PputUW4_04873 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PputUW4_04675 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PputUW4_05321 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PputUW4_04876 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PputUW4_04866 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PputUW4_00340 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PputUW4_04036 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PputUW4_05320 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PputUW4_05443 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PputUW4_03388 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PputUW4_04863 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PputUW4_04583 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PputUW4_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0076 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0089 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0080 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0093 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0090 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0077 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ppuu03009]
D PputUW4_00958 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PputUW4_00577 protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PputUW4_00444 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PputUW4_00959 era; GTP-binding protein Era K03595 era; GTPase
D PputUW4_04674 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PputUW4_04624 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PputUW4_01938 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D PputUW4_00705 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PputUW4_04826 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PputUW4_04896 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PputUW4_01253 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PputUW4_04938 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PputUW4_00014 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PputUW4_04546 rsmC1; 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PputUW4_05138 rsmD; 16S rRNA m2G966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PputUW4_05088 rsmE2; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PputUW4_05437 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PputUW4_04511 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PputUW4_04515 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PputUW4_01064 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PputUW4_01075 rlmA; rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PputUW4_00462 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PputUW4_00698 rlmE; ribosomal RNA large subunit methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PputUW4_04439 rlmF; ribosomal RNA large subunit methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D PputUW4_04708 rsmC2; 16S rRNA m(2)G 1207 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D PputUW4_04784 rlmH; rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PputUW4_05150 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PputUW4_04637 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PputUW4_01915 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PputUW4_00390 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PputUW4_03608 rlmL; 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D PputUW4_03533 rlmM; RNA 2-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PputUW4_00936 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PputUW4_04106 rumA; 23S rRNA 5-methyluridine methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PputUW4_03728 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PputUW4_01459 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PputUW4_03922 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PputUW4_04041 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PputUW4_04653 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PputUW4_04754 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PputUW4_01138 RNA-binding S4 K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PputUW4_04600 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PputUW4_00207 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PputUW4_04432 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PputUW4_01140 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PputUW4_03321 YcaO-like fatty acid binding protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PputUW4_00551 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PputUW4_03704 prmB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PputUW4_01816 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PputUW4_04042 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PputUW4_00767 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PputUW4_05109 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PputUW4_05052 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PputUW4_01437 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PputUW4_00443 rsgA; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PputUW4_00943 engA; GTP-binding protein EngA K03977 engA; GTPase
D PputUW4_00453 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D PputUW4_00019 rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PputUW4_05336 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PputUW4_00707 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PputUW4_00704 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PputUW4_04785 hypothetical protein K09710 ybeB; ribosome-associated protein
D PputUW4_04765 metalloprotease K07042 ybeY; probable rRNA maturation factor
D PputUW4_00697 hypothetical protein K07574 yhbY; RNA-binding protein
D PputUW4_00771 hypothetical protein K09889 yjgA; ribosome-associated protein
D PputUW4_03609 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D PputUW4_00776 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D PputUW4_04585 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D PputUW4_04037 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ppuu03016]
D PputUW4_04945 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PputUW4_03465 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PputUW4_01146 proS1; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PputUW4_03053 proS2; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PputUW4_04668 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PputUW4_04770 leuS2; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_01812 leuS1; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_04392 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PputUW4_01779 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PputUW4_00338 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PputUW4_01048 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PputUW4_04300 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PputUW4_04165 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PputUW4_03390 thrS1; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PputUW4_05403 thrS2; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PputUW4_01834 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PputUW4_01780 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PputUW4_04438 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PputUW4_00940 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PputUW4_03386 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PputUW4_03385 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PputUW4_04901 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PputUW4_04535 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PputUW4_00313 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PputUW4_04911 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PputUW4_05126 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PputUW4_01135 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PputUW4_03443 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PputUW4_00708 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PputUW4_01115 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PputUW4_00928 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_01513 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_00019 rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PputUW4_00451 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PputUW4_05439 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PputUW4_05438 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PputUW4_01619 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PputUW4_00228 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PputUW4_05442 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PputUW4_04405 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PputUW4_05332 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PputUW4_01299 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PputUW4_03111 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PputUW4_04694 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PputUW4_00008 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PputUW4_00007 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PputUW4_04625 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PputUW4_04414 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PputUW4_00128 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PputUW4_00983 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PputUW4_03491 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PputUW4_00549 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PputUW4_03461 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PputUW4_04763 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PputUW4_00985 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PputUW4_00984 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PputUW4_00567 smtA; S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D PputUW4_04716 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PputUW4_04431 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PputUW4_00925 trmH; RNA methyltransferase TrmH, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PputUW4_02705 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D PputUW4_00280 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PputUW4_03728 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PputUW4_01459 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PputUW4_01819 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PputUW4_04121 hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PputUW4_03532 sirA; sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PputUW4_01283 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PputUW4_01839 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PputUW4_01840 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PputUW4_01841 tusD; tRNA 2-thiouridine synthesizing protein D K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PputUW4_01838 tusE; tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PputUW4_00930 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D PputUW4_01274 glycine cleavage T protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PputUW4_02912 miaE; tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PputUW4_01339 mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PputUW4_00917 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PputUW4_04287 ExsB family transcriptional regulator K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PputUW4_01606 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PputUW4_04288 radical SAM family protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PputUW4_03498 cinQ; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PputUW4_00446 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PputUW4_01620 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PputUW4_00918 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PputUW4_00286 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PputUW4_01105 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PputUW4_01059 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PputUW4_04949 gcp; UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PputUW4_00448 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PputUW4_01078 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PputUW4_00461 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PputUW4_00710 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PputUW4_00253 virulence-associated protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ppuu03012]
D PputUW4_00560 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D PputUW4_00706 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PputUW4_03389 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PputUW4_05266 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PputUW4_01089 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PputUW4_04886 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PputUW4_04887 fusA2; elongation factor G K02355 fusA; elongation factor G
D PputUW4_02562 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D PputUW4_04577 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PputUW4_01091 rrf; ribosome recycling factor K02838 frr; ribosome recycling factor
D PputUW4_03845 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PputUW4_04576 hemK; modification methylase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PputUW4_04584 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PputUW4_01826 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PputUW4_01425 efp; translation elongation factor P K02356 efp; elongation factor P
D PputUW4_01047 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PputUW4_00735 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PputUW4_04773 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D PputUW4_03919 peptidyl-tRNA hydrolase domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ppuu03110]
D PputUW4_01825 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PputUW4_04651 clpB; chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PputUW4_01711 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PputUW4_00335 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PputUW4_03790 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PputUW4_00690 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PputUW4_00932 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D PputUW4_00507 yegD; heat shock protein YegD K04046 yegD; hypothetical chaperone protein
D PputUW4_04386 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PputUW4_00691 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PputUW4_00508 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D PputUW4_04932 heat shock protein DnaJ-like protein K05801 djlA; DnaJ like chaperone protein
D PputUW4_00931 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D PputUW4_00210 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D PputUW4_00689 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PputUW4_03460 ibpA; heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D PputUW4_00209 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D PputUW4_04387 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D PputUW4_01281 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PputUW4_00699 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PputUW4_05433 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PputUW4_00279 secB; preprotein translocase subunit K03071 secB; preprotein translocase subunit SecB
D PputUW4_03931 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D PputUW4_02033 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D PputUW4_00530 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D PputUW4_00217 extracellular serine protease K01342 aprE; subtilisin [EC:3.4.21.62]
D PputUW4_03982 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PputUW4_01778 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PputUW4_01714 ppiD; PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PputUW4_05269 peptidylprolyl isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PputUW4_03746 peptidylprolyl isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PputUW4_04680 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PputUW4_04666 peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D PputUW4_00800 slyD; FKBP-type peptidyl-prolyl cis-transisomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PputUW4_02380 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PputUW4_02370 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PputUW4_02582 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PputUW4_04936 surA; PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PputUW4_05250 trxA; thioredoxin K03671 TXN; thioredoxin
D PputUW4_00379 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D PputUW4_04834 ybbN; thioredoxin K05838 ybbN; putative thioredoxin
D PputUW4_00278 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D PputUW4_04409 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D PputUW4_00074 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PputUW4_00850 dsbB1; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PputUW4_05271 dsbB2; disulfide bond formation protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PputUW4_04428 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PputUW4_01495 dsbD2; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PputUW4_00555 dsbD1; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PputUW4_03834 dsbE2; thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D PputUW4_01493 dsbG; disulfide isomerase/thiol-disulfide oxidase K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:ppuu04131]
D PputUW4_00935 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PputUW4_04547 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PputUW4_04263 gap2; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_03509 gap1; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_04336 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03823 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03790 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ppuu04121]
C 03051 Proteasome [BR:ppuu03051]
D PputUW4_03790 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ppuu03032]
D PputUW4_02879 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PputUW4_04188 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PputUW4_05348 hupA; DNA-binding protein, subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D PputUW4_04441 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PputUW4_01713 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PputUW4_03384 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PputUW4_01366 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PputUW4_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D PputUW4_00467 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PputUW4_04951 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PputUW4_04853 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PputUW4_01103 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PputUW4_00002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PputUW4_00952 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PputUW4_04772 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PputUW4_04027 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PputUW4_02878 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04993 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04737 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_03578 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PputUW4_01102 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PputUW4_00070 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PputUW4_03595 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_05069 ligb; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_03781 hda; DNA replication initiation factor K10763 hda; DnaA-homolog protein
D PputUW4_01358 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PputUW4_00004 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PputUW4_00431 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PputUW4_00428 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PputUW4_02396 DNA topoisomerase, type I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PputUW4_03520 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PputUW4_03014 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ppuu03036]
D PputUW4_04188 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PputUW4_00958 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PputUW4_05348 hupA; DNA-binding protein, subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D PputUW4_04441 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PputUW4_01713 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PputUW4_03384 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PputUW4_01366 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PputUW4_00508 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D PputUW4_00509 cbpM; chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D PputUW4_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D PputUW4_00548 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PputUW4_00452 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PputUW4_04368 iciA; chromosome replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PputUW4_05412 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_04752 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_05311 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_02310 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_04736 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_02961 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PputUW4_04442 ndpA; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D PputUW4_03597 smc; chromosome partition protein K03529 smc; chromosome segregation protein
D PputUW4_03924 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D PputUW4_03923 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D PputUW4_04499 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PputUW4_01109 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D PputUW4_05134 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PputUW4_04509 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PputUW4_01830 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PputUW4_04510 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PputUW4_04500 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PputUW4_04504 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PputUW4_05133 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PputUW4_04498 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PputUW4_03596 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D PputUW4_05238 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D PputUW4_00384 hypothetical protein K09888 zapA; cell division protein ZapA
D PputUW4_05237 hypothetical protein K09892 zapB; cell division protein ZapB
D PputUW4_01753 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D PputUW4_04534 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D PputUW4_02473 ATPase K06916 zapE; cell division protein ZapE
D PputUW4_00449 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PputUW4_02439 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01213 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_04378 RND family multidrug transporter membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_03725 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D PputUW4_03726 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PputUW4_03727 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PputUW4_03517 sulA; SOS cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
D PputUW4_00763 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PputUW4_00764 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PputUW4_00765 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PputUW4_04782 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PputUW4_00378 ParA family protein K03496 parA; chromosome partitioning protein
D PputUW4_03851 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D PputUW4_05436 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PputUW4_02668 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D PputUW4_05435 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PputUW4_00431 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PputUW4_00428 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PputUW4_05438 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PputUW4_05437 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PputUW4_05289 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PputUW4_02776 phage integrase K03733 xerC; integrase/recombinase XerC
D PputUW4_04429 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PputUW4_04391 ParA family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PputUW4_00071 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ppuu03400]
D PputUW4_01849 methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PputUW4_04570 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PputUW4_01266 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PputUW4_04788 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PputUW4_00263 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PputUW4_04398 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PputUW4_02552 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PputUW4_04313 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PputUW4_01012 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PputUW4_05325 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PputUW4_02402 O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PputUW4_02905 DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PputUW4_02403 alkB; alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D PputUW4_02907 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PputUW4_04272 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PputUW4_00009 tag1; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PputUW4_05148 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PputUW4_05329 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PputUW4_01773 xthA1; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PputUW4_03476 xthA2; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PputUW4_04420 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PputUW4_03595 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_05069 ligb; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PputUW4_00070 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PputUW4_04855 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PputUW4_03468 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PputUW4_02387 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PputUW4_05390 mutB; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PputUW4_04891 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PputUW4_04890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PputUW4_04859 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PputUW4_05335 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PputUW4_03510 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PputUW4_01121 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PputUW4_00450 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PputUW4_04326 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PputUW4_00948 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PputUW4_04816 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PputUW4_01103 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PputUW4_00002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PputUW4_00952 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PputUW4_04772 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PputUW4_04027 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PputUW4_02878 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04993 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_04737 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PputUW4_03578 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PputUW4_04853 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PputUW4_04193 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PputUW4_00603 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PputUW4_00602 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PputUW4_00604 recD; DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PputUW4_01125 recA; recombinase A K03553 recA; recombination protein RecA
D PputUW4_04297 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PputUW4_04296 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PputUW4_04298 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PputUW4_00339 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PputUW4_02851 nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D PputUW4_02850 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D PputUW4_04704 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PputUW4_00003 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D PputUW4_05344 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PputUW4_00960 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PputUW4_03575 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PputUW4_00688 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PputUW4_03749 recombination associated protein K03554 rdgC; recombination associated protein RdgC
D PputUW4_00646 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PputUW4_04318 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PputUW4_02501 KU domain-containing protein K10979 ku; DNA end-binding protein Ku
D PputUW4_01358 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PputUW4_00004 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PputUW4_02396 DNA topoisomerase, type I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PputUW4_03520 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PputUW4_05348 hupA; DNA-binding protein, subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D PputUW4_04441 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PputUW4_01713 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PputUW4_00548 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PputUW4_03384 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PputUW4_01366 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PputUW4_03944 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PputUW4_00218 recQ1; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PputUW4_01144 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PputUW4_02327 lexA1; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PputUW4_03516 lexA2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PputUW4_01630 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D PputUW4_02328 hypothetical protein K14160 imuA; protein ImuA
D PputUW4_02329 hypothetical protein K14161 imuB; protein ImuB
D PputUW4_02330 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PputUW4_01126 recX; recombination regulator RecX K03565 recX; regulatory protein
D PputUW4_05303 rep2; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PputUW4_01169 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PputUW4_04843 lhr; ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PputUW4_04133 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PputUW4_04186 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ppuu03029]
D PputUW4_04523 petB; cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PputUW4_00706 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PputUW4_03389 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PputUW4_01089 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PputUW4_04886 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PputUW4_04887 fusA2; elongation factor G K02355 fusA; elongation factor G
D PputUW4_00959 era; GTP-binding protein Era K03595 era; GTPase
D PputUW4_04901 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PputUW4_04770 leuS2; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_01812 leuS1; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PputUW4_04300 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PputUW4_00338 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PputUW4_00761 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PputUW4_00760 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PputUW4_00762 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PputUW4_04853 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PputUW4_01096 yaeT; outer membrane protein assembly complex,YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D PputUW4_00690 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PputUW4_00689 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PputUW4_04386 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PputUW4_04387 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D PputUW4_00691 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PputUW4_00928 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_01513 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_00931 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D PputUW4_04409 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D PputUW4_04391 ParA family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PputUW4_00057 cyoE1; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00855 cyoE2; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PputUW4_00051 ctaG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PputUW4_00056 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PputUW4_05440 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PputUW4_00054 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D PputUW4_02034 SCO1/SenC family protein K07152 SCO1; protein SCO1
D PputUW4_00058 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D PputUW4_03295 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D PputUW4_01964 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D PputUW4_03294 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D PputUW4_03790 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ppuu02000]
D PputUW4_00412 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PputUW4_03983 multidrug ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PputUW4_03528 multidrug ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PputUW4_00116 type I secretion system ATPase family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PputUW4_03952 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PputUW4_01721 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PputUW4_02633 prtD; type I secretion system ATPase PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PputUW4_01348 ABC transporter family protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PputUW4_01573 Macrolide ABC transporter ATP-binding protein/permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PputUW4_01567 pvdE; pyoverdine biosynthesis protein PvdE K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D PputUW4_00750 ABC transporter-like protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PputUW4_03526 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PputUW4_03826 sbp; sulfate ABC transporter periplasmic protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PputUW4_00154 cysP; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PputUW4_00155 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PputUW4_00156 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PputUW4_00157 cysA; sulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PputUW4_02399 modA; molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D PputUW4_02398 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D PputUW4_02397 modC; molybdate ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PputUW4_05218 tauA3; taurine-binding periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D PputUW4_00200 tauA2; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D PputUW4_00198 tauC2; taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D PputUW4_00199 tauB2; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PputUW4_00167 atsR; periplasmic aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_05212 ssuA; sulfonate ABC transporter, periplasmic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_00119 tauA1; sulfonate/nitrate/taurine transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_02319 nitrate ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PputUW4_00166 atsB; aliphatic sulfonates ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PputUW4_05210 ssuC; aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D PputUW4_00121 tauC1; sulfonate/nitrate/taurine transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PputUW4_02320 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PputUW4_00165 atsC; sulfate ester transporter ATP-binding component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_05209 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_00120 tauB1; sulfonate/nitrate/taurine transport system ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_02321 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PputUW4_05232 iron ABC transporter periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_02773 iron(III) ABC transporter periplasmic-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_05162 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_00460 iron(III) ABC transporter periplasmic-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PputUW4_05231 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_02774 iron(III)-transport system permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_05163 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_00459 iron(III)-transporter permease K02011 afuB; iron(III) transport system permease protein
D PputUW4_02775 Fe(3+) ions import ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PputUW4_04412 potA3; ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PputUW4_05164 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PputUW4_03039 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PputUW4_02334 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PputUW4_03150 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PputUW4_03041 putrescine transport system permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PputUW4_02335 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PputUW4_03148 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PputUW4_03040 spermidine/putrescine transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein
D PputUW4_02336 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PputUW4_03149 spermidine/putrescine transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein
D PputUW4_02337 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PputUW4_03038 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PputUW4_03147 spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PputUW4_05198 potF1; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_05199 potF2; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02766 putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02054 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_03110 putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_03236 potD2; putrescine ABC transporter periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02908 spermidine/putrescine transport system substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02470 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_01595 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_02548 putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_01909 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_05378 potD4; putrescine/polyamine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D PputUW4_05195 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D PputUW4_03109 putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein
D PputUW4_05196 potH; putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein
D PputUW4_03108 putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein
D PputUW4_05197 potG; spermidine/putrescine ABC transporter ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PputUW4_03107 putrescine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PputUW4_01036 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_02761 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_04353 potD3; spermidine/putrescine ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_03229 potD1; polyamine ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_03733 ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_00874 polyamine ABC transporter periplasmic polyamine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_03156 binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_04927 ABC transporter periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PputUW4_01033 binding-protein dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_04351 potC2; spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_03231 potB1; polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_03736 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_00872 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_04925 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PputUW4_01034 binding-protein dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_04352 potB2; spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_03230 potC1; polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_03735 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_00873 polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_04926 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PputUW4_01035 spermidine/putrescine ABC transporter ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_04350 potA2; spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_03232 potA1; polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_03737 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_00875 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_04928 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PputUW4_00024 choline ABC transporter periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_00302 putative histidine transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_00310 choline ABC transporter, periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_04231 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_05033 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_05042 glycine betaine/L-proline ABC transporter periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_01946 ABC transporter periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_03810 glycine/betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PputUW4_00303 opuAB; Glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PputUW4_05043 glycine betaine/L-proline ABC transporter permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PputUW4_00304 opuAA; glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PputUW4_05044 glycine betaine/L-proline transport ATP-binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PputUW4_00732 glycine betaine/L-proline ABC transporter periplasmic substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PputUW4_00731 glycine betaine/carnitine/choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PputUW4_00733 glycine betaine/carnitine/choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PputUW4_00730 glycine betaine/L-proline transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PputUW4_04744 sulfonate/nitrate transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PputUW4_01262 urea carboxylase-related ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PputUW4_04743 binding-protein dependent transport system inner membrane protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PputUW4_01261 urea carboxylase-related ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PputUW4_04742 ABC transporter-like protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PputUW4_01260 urea carboxylase-related ABC transporter, ATPase protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PputUW4_03370 malK; maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PputUW4_04254 glucose ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PputUW4_04257 sugar ABC transporter periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PputUW4_04256 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D PputUW4_04255 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D PputUW4_03367 malE; maltose/maltodextrin ABC transporter substrate binding periplasmic protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PputUW4_03368 malF; maltose/maltodextrin ABC transporter permease protein MalF K10237 thuF; trehalose/maltose transport system permease protein
D PputUW4_03369 malG; maltose/maltodextrin ABC transporter permease protein K10238 thuG; trehalose/maltose transport system permease protein
D PputUW4_01308 L-arabinose ABC transporter substrate-binding periplasmic protein K10537 araF; L-arabinose transport system substrate-binding protein
D PputUW4_01310 L-arabinose transporter permease protein K10538 araH; L-arabinose transport system permease protein
D PputUW4_01309 L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D PputUW4_03402 rbsB; ribose ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PputUW4_03400 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D PputUW4_03401 rbsA; ribose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PputUW4_01787 ABC transporter periplasmic protein K17321 glpV; glycerol transport system substrate-binding protein
D PputUW4_01784 ABC transporter permease K17322 glpP; glycerol transport system permease protein
D PputUW4_01785 ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D PputUW4_01782 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D PputUW4_01783 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D PputUW4_00589 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PputUW4_00595 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D PputUW4_00594 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D PputUW4_00596 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PputUW4_00037 ABC transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PputUW4_00785 toluene tolerance ABC transporter periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PputUW4_00035 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PputUW4_00784 toluene tolerance ABC efflux transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PputUW4_00036 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PputUW4_00783 toluene tolerance ABC efflux transporter,ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PputUW4_00038 lipoprotein K18480 linN; cholesterol transport system auxiliary component
D PputUW4_00786 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PputUW4_00787 anti-sigma-factor antagonist (STAS) K07122 mlaB; phospholipid transport system transporter-binding protein
D PputUW4_01771 OmpA/MotB domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D PputUW4_05364 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PputUW4_05363 pstC; phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D PputUW4_05362 pstA; phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D PputUW4_05361 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PputUW4_03163 phnD; phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D PputUW4_03165 phnE1; phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D PputUW4_03166 phnE2; phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D PputUW4_03164 phnC; phosphonate-transporting ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PputUW4_01155 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein
D PputUW4_02208 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D PputUW4_01156 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein
D PputUW4_02207 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D PputUW4_01153 amino acid ABC transporter ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02209 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_01157 amino acid ABC transporter periplasmic amino acid-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D PputUW4_02206 hisJ; periplasmic histidine-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein
D PputUW4_01023 extracellular solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PputUW4_01021 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D PputUW4_01022 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D PputUW4_01020 ABC transporter-like protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_04458 amino acid ABC transporter periplasmic protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PputUW4_04457 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D PputUW4_04456 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D PputUW4_04455 glnQ; amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_05184 extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_00192 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_00191 cystine transport system permease protein K10009 tcyB; L-cystine transport system permease protein
D PputUW4_00190 cystine transport system ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_04464 lysine-arginine-ornithine-binding periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_04182 ABC transporter periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_03208 lysine-arginine-ornithine-binding periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_02224 arginine/ornithine ABC transporter periplasmic-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PputUW4_04180 amino acid ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D PputUW4_02222 arginine/ornithine ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D PputUW4_04181 amino acid ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D PputUW4_02223 arginine/ornithine transport system permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D PputUW4_04178 ABC transporter-like protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02220 histidine transport ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_00481 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_01187 branched-chain amino acid ABC transporter periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_02744 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PputUW4_00482 braD; inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_01186 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_02741 ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PputUW4_01185 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_02740 ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_00483 braE; high-affinity branched-chain amino acid ABC transporter permease BraE K01998 livM; branched-chain amino acid transport system permease protein
D PputUW4_00484 braF; high-affinity branched-chain aminoacidtransportATP-binding protein BraF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_01184 leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_02743 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PputUW4_01183 ABC transporter-like protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_02742 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_00485 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PputUW4_00059 metQ1; D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PputUW4_00176 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D PputUW4_00185 metQ2; D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PputUW4_00060 metI1; D-methionine ABC transport system permease K02072 metI; D-methionine transport system permease protein
D PputUW4_00183 metI2; D-methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PputUW4_00061 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D PputUW4_00184 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D PputUW4_00522 urea ABC transporter urea binding protein K11959 urtA; urea transport system substrate-binding protein
D PputUW4_00521 urtB; urea ABC transporter permease protein UrtB K11960 urtB; urea transport system permease protein
D PputUW4_00520 urtC; urea ABC transporter permease protein UrtC K11961 urtC; urea transport system permease protein
D PputUW4_00519 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D PputUW4_00518 urtE; urea ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D PputUW4_00250 amino acid ABC transporter, periplasmic amino acid-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D PputUW4_00249 amino acid ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PputUW4_00248 polar amino acid ABC transporter inner membrane subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PputUW4_00251 ABC transporter-like protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02684 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_02666 amino acid ABC transporter periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_05252 ABC transporter periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_03001 periplasmic amino acid binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_03175 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_05055 amino acid ABC transporter periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_05080 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_02755 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_03579 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_02238 ABC transporter periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_00272 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_01322 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PputUW4_05253 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PputUW4_05254 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PputUW4_03173 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PputUW4_03174 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PputUW4_02665 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PputUW4_03000 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PputUW4_02237 glutamine ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_05255 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_02999 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_03176 aspartate aminotransferase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PputUW4_00743 nikA1; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00745 nikA2; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00746 nikA3; nickel ABC transporter periplasmic nickel-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_05322 periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D PputUW4_00742 nikB; nickel transporter permease K12369 dppB; dipeptide transport system permease protein
D PputUW4_00741 nikC; nickel transporter permease K12370 dppC; dipeptide transport system permease protein
D PputUW4_00740 nikD; nickel import ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D PputUW4_00739 nikE; nickel import ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D PputUW4_02883 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PputUW4_02884 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PputUW4_02379 ABC transporter periplasmic protein K13893 yejA; microcin C transport system substrate-binding protein
D PputUW4_02885 ABC transporter permease K13894 yejB; microcin C transport system permease protein
D PputUW4_02378 peptide ABC transporter permease K13894 yejB; microcin C transport system permease protein
D PputUW4_02886 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PputUW4_02377 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PputUW4_02887 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PputUW4_02376 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PputUW4_02037 iron complex transport system permease protein K25133 hmuU; heme transport system permease protein
D PputUW4_02036 hemin importer ATP-binding subunit K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PputUW4_03431 cbrA; achromobactin-binding periplasmic protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D PputUW4_03430 cbrB; achromobactin transport system permease protein CbrB K25110 sirB; iron-siderophore transport system permease protein
D PputUW4_03429 cbrC; achromobactin transport system permease protein CbrC K25111 sirC; iron-siderophore transport system permease protein
D PputUW4_03428 cbrD; achromobactin transport ATP-binding protein CbrD K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PputUW4_00525 iron ABC transporter periplasmic substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PputUW4_00524 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PputUW4_00526 iron complex transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PputUW4_04820 btuF; vitamin B12-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D PputUW4_00067 znuA; Zinc ABC transporter periplasmic protein K09815 znuA; zinc transport system substrate-binding protein
D PputUW4_01505 ABC transporter periplasmic protein K09815 znuA; zinc transport system substrate-binding protein
D PputUW4_00064 znuB; zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D PputUW4_01503 ABC transporter permease K09816 znuB; zinc transport system permease protein
D PputUW4_00065 znuC; Zinc import ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PputUW4_01504 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PputUW4_01527 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D PputUW4_01526 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PputUW4_00954 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D PputUW4_00955 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D PputUW4_00778 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PputUW4_03502 lolCE1; LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PputUW4_03504 lolCE2; LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PputUW4_03503 lolD; lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PputUW4_03837 ccmD; cytochrome c-type biogenesis protein K02196 ccmD; heme exporter protein D
D PputUW4_03838 ccmC; cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D PputUW4_03839 ccmB; cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D PputUW4_03840 ccmA; cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PputUW4_05133 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PputUW4_05134 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PputUW4_02325 mcbE; protein McbE K01992 ABC-2.P; ABC-2 type transport system permease protein
D PputUW4_02951 ABC efflux system permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PputUW4_04056 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PputUW4_02324 mcbF; Protein McbF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PputUW4_02950 ABC efflux system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PputUW4_04057 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PputUW4_03224 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PputUW4_01407 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PputUW4_02118 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PputUW4_02119 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PputUW4_04838 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PputUW4_03225 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PputUW4_01408 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PputUW4_02117 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PputUW4_04837 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PputUW4_03234 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PputUW4_05301 norA; multidrug resistance-transport membrane protein K26939 norM; MATE family, multidrug efflux pump
D PputUW4_03531 multidrug efflux transporter K26939 norM; MATE family, multidrug efflux pump
D PputUW4_01901 MatE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D PputUW4_00564 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D PputUW4_03382 citA3; citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D PputUW4_04345 alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D PputUW4_03327 major facilitator transporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D PputUW4_02681 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PputUW4_02620 major facilitator superfamily protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PputUW4_05365 major facilitator family transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PputUW4_00754 D-galactonate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D PputUW4_01598 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PputUW4_04724 major facilitator transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PputUW4_03008 major facilitator transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D PputUW4_01317 D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D PputUW4_03996 major facilitator transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D PputUW4_03423 major facilitator transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D PputUW4_01200 pcaK; 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D PputUW4_02656 MFS family benzoate membrane transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D PputUW4_04453 cyanate transport system protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PputUW4_01295 cynX; cyanate transport protein CynX K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PputUW4_03700 major facilitator transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PputUW4_05245 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PputUW4_03640 nasA; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PputUW4_01147 AmpG-related permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PputUW4_00582 Bcr/CflA subfamily drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PputUW4_05151 multidrug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PputUW4_01217 major facilitator family transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PputUW4_05075 major facilitator transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PputUW4_04845 major facilitator transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PputUW4_01699 major facilitator transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PputUW4_01895 EmrB/QacA subfamily drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PputUW4_03467 emrB; EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PputUW4_01591 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PputUW4_00123 multidrug efflux MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PputUW4_02412 transporter-like membrane protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PputUW4_03032 fsr1; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PputUW4_04587 fsr2; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PputUW4_00355 major facilitator transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PputUW4_02688 major facilitator family protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D PputUW4_05172 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PputUW4_00773 phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D PputUW4_00719 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PputUW4_00967 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PputUW4_00966 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PputUW4_00721 fruA; PTS system fructose-specific transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PputUW4_00775 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PputUW4_03984 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D PputUW4_04415 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PputUW4_03825 ion transport protein K10716 kch; voltage-gated potassium channel
D PputUW4_05293 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D PputUW4_01456 Rh family protein/ammonium transporter K03320 amt; ammonium transporter, Amt family
D PputUW4_05417 gstA; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_05278 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04228 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_03021 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04314 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_00864 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04058 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_02852 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PputUW4_04521 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D PputUW4_02847 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D PputUW4_02848 TPR domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PputUW4_02821 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D PputUW4_02822 TPR repeat-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PputUW4_02308 hypothetical protein K19416 yccA; modulator of FtsH protease
D PputUW4_04705 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PputUW4_00381 kefA; potassium efflux system K05802 mscK; potassium-dependent mechanosensitive channel
D PputUW4_02045 mscS1; mechanosensitive ion channel MscS K05802 mscK; potassium-dependent mechanosensitive channel
D PputUW4_04308 mscS3; mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D PputUW4_04844 mscS4; MscS mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D PputUW4_03731 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D PputUW4_03975 MscS mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D PputUW4_04162 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D PputUW4_03824 urea transporter K08717 utp; urea transporter
D PputUW4_03853 motA2; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PputUW4_00438 motA1; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PputUW4_03852 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PputUW4_00439 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PputUW4_04403 OmpA family outer membrane protein K21218 motY; sodium-type flagellar protein MotY
D PputUW4_05340 exbB; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D PputUW4_00172 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PputUW4_04053 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D PputUW4_05341 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PputUW4_04052 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D PputUW4_00173 biopolymer transport protein ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD
D PputUW4_04294 tolQ; biopolymer transport protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D PputUW4_04293 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D PputUW4_02506 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter
D PputUW4_03681 CorA-like Mg2+ transporter protein K03284 corA; magnesium transporter
D PputUW4_03650 corA; CorA-like Mg2+ transporter protein K16074 zntB; zinc transporter
D PputUW4_04208 cation transporter K16074 zntB; zinc transporter
D PputUW4_01833 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D PputUW4_03058 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D PputUW4_04436 corB; CBS (cystathionine beta-synthase) domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PputUW4_05356 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PputUW4_03366 scrY; sucrose porin K16077 scrY; sucrose porin
D PputUW4_03646 ompF; outer membrane porin F K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PputUW4_01165 OmpA/MotB domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PputUW4_02024 fadL; Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D PputUW4_01729 fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D PputUW4_02151 Outer membrane protein precursor K06076 fadL; long-chain fatty acid transport protein
D PputUW4_03761 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein
D PputUW4_04920 estA; esterase EstA K12686 apeE; outer membrane lipase/esterase
D PputUW4_04475 algE; outer membrane protein AlgE K16081 algE; alginate production protein
D PputUW4_00726 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D PputUW4_01601 fecA; FecA-like outer membrane receptor K16091 fecA; Fe(3+) dicitrate transport protein
D PputUW4_04819 btuB; B12 family TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D PputUW4_02898 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PputUW4_02911 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PputUW4_01566 fpvA; TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PputUW4_04267 TonB-dependent outer membrane heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PputUW4_00238 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_03432 ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_00839 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_01625 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_04096 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_02258 outer membrane siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_00528 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_00170 sftP; TonB-dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_04996 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PputUW4_01719 TolC family type I secretion outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_00115 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PputUW4_03951 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PputUW4_02534 multidrug efflux system outer membrane protein K18300 oprN; outer membrane protein, multidrug efflux system
D PputUW4_01211 multidrug efflux RND outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D PputUW4_01983 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PputUW4_03551 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D PputUW4_00990 oprB1; porin B K07267 oprB; porin
D PputUW4_04253 oprB2; carbohydrate-selective porin OprB K07267 oprB; porin
D PputUW4_04307 oprD3; outer membrane protein D K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PputUW4_01096 yaeT; outer membrane protein assembly complex,YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D PputUW4_00942 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D PputUW4_01288 NlpB/DapX lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D PputUW4_04654 comL; competence lipoprotein ComL K05807 bamD; outer membrane protein assembly factor BamD
D PputUW4_00686 omlA; outer membrane lipoprotein OmlA K06186 bamE; outer membrane protein assembly factor BamE
D PputUW4_01775 surface antigen family protein K07278 tamA; translocation and assembly module TamA
D PputUW4_01776 hypothetical protein K09800 tamB; translocation and assembly module TamB
D PputUW4_04149 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PputUW4_00779 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D PputUW4_00780 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D PputUW4_04935 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D PputUW4_04771 rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D PputUW4_03623 sipB; invasin K13285 sipB; invasin B
D PputUW4_03621 sipD; type III effector protein cell invasion protein K13287 sipD; invasin D
D PputUW4_04766 transporter-associated region K06189 corC; hemolysin (HlyC) family protein
D PputUW4_04792 LrgA family protein K06518 cidA; holin-like protein
D PputUW4_03921 aromatic amino acid permease K11734 aroP; aromatic amino acid transport protein AroP
D PputUW4_00252 gabP; GABA permease K11735 gabP; GABA permease
D PputUW4_02100 GABA permease K11735 gabP; GABA permease
D PputUW4_00307 proY; proline-specific permease K16234 hutT; histidine transporter
D PputUW4_02648 amino acid transporter K16235 mmuP; S-methylmethionine transporter
D PputUW4_02753 amino acid transporter K02205 rocE; arginine/ornithine permease
D PputUW4_02030 putrescine transporter K03756 potE; putrescine:ornithine antiporter
D PputUW4_02685 putrescine transporter K03756 potE; putrescine:ornithine antiporter
D PputUW4_04273 arcD1; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PputUW4_04274 arcD2; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PputUW4_04801 amino acid permease-associated region K16238 eat; ethanolamine permease
D PputUW4_01386 amino acid transport-related membrane protein K16238 eat; ethanolamine permease
D PputUW4_04750 cation efflux protein K13283 fieF; ferrous-iron efflux pump FieF
D PputUW4_02535 mexF; multidrug efflux RND transporter permease MexF K18299 mexF; multidrug efflux pump
D PputUW4_01067 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D PputUW4_02139 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D PputUW4_04492 multidrug efflux system transmembrane protein K21133 mexN; multidrug efflux pump
D PputUW4_01212 multidrug efflux RND inner membrane transporter K18138 acrB; multidrug efflux pump
D PputUW4_04379 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D PputUW4_02438 multidrug efflux system transmembrane protein K18138 acrB; multidrug efflux pump
D PputUW4_00180 acriflavin resistance protein K21134 triC; multidrug efflux pump
D PputUW4_02812 multidrug efflux system transmembrane protein K07788 mdtB; multidrug efflux pump
D PputUW4_02811 multidrug efflux system transmembrane protein K07789 mdtC; multidrug efflux pump
D PputUW4_00417 Quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D PputUW4_00501 sugE; small multidrug resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PputUW4_03751 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PputUW4_05391 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PputUW4_01521 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D PputUW4_04988 rarD3; RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PputUW4_02424 rarD1; RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PputUW4_03844 rarD2; RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PputUW4_01333 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PputUW4_01614 nhaC; Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter
D PputUW4_04224 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PputUW4_03116 L-lactate permease K03303 lutP; lactate permease
D PputUW4_00680 L-lactate permease K03303 lutP; lactate permease
D PputUW4_00195 putative choline/betaine transporter-like membrane protein K02168 betT; choline/glycine/proline betaine transport protein
D PputUW4_05045 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein
D PputUW4_00758 K+-dependent Na+/Ca+ exchanger protein K07301 yrbG; cation:H+ antiporter
D PputUW4_01197 pitA; low-affinity inorganic phosphate transport membrane protein K16322 pit; low-affinity inorganic phosphate transporter
D PputUW4_00388 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D PputUW4_02233 acetate permease K14393 actP; cation/acetate symporter
D PputUW4_03808 acetate permease K14393 actP; cation/acetate symporter
D PputUW4_00083 gltP; glutamate/aspartate:proton symporter K11102 gltP; proton glutamate symport protein
D PputUW4_02637 sodium:dicarboxylate symporter K11102 gltP; proton glutamate symport protein
D PputUW4_04697 dctA3; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_02987 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_04125 dctA2; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_03375 dctA1; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D PputUW4_01698 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D PputUW4_02277 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D PputUW4_01176 nhaA; pH-dependent sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D PputUW4_02480 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D PputUW4_01083 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PputUW4_02554 sodium/hydrogen exchanger family protein K24160 NHA1; sodium/hydrogen antiporter
D PputUW4_00382 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D PputUW4_02991 kefB; glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PputUW4_05394 sodium/proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D PputUW4_03934 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PputUW4_00013 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D PputUW4_03238 permease for cytosine/purines, uracil, thiamine, allantoin K23467 tgnP; trigonelline permease
D PputUW4_04564 xanthine/uracil permease K02824 uraA; uracil permease
D PputUW4_03472 xanthine/uracil permease K24206 uacT; uric acid transporter
D PputUW4_03720 uracil-xanthine permease K24206 uacT; uric acid transporter
D PputUW4_02780 xanthine/uracil permease K16345 xanP; xanthine permease XanP
D PputUW4_03712 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PputUW4_04715 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PputUW4_02917 sdaC; serine transporter K03837 sdaC; serine transporter
D PputUW4_03604 benE; benzoate transporter membrane protein K05782 benE; benzoate membrane transport protein
D PputUW4_02655 benzoate transport protein K05782 benE; benzoate membrane transport protein
D PputUW4_03067 chrA; chromate transporter K07240 chrA; chromate transporter
D PputUW4_00023 SulP family sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PputUW4_00617 SulP family sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PputUW4_03092 SulP family sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PputUW4_00032 yjbB; sodium-dependent inorganic phosphate(Pi) transporter family protein K03324 yjbB; phosphate:Na+ symporter
D PputUW4_02250 arsB; arsenite efflux transporter K03893 arsB; arsenical pump membrane protein
D PputUW4_01953 phaAB; K(+)/H(+) antiporter subunit A/B K05559 phaA; multicomponent K+:H+ antiporter subunit A
D PputUW4_01952 phaC; K(+)/H(+) antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D PputUW4_01951 phaD2; K(+)/H(+) antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D PputUW4_01950 phaE; K(+)/H(+) antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D PputUW4_01949 phaF2; K(+)/H(+) antiporter, subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D PputUW4_01948 phaG2; K(+)/H(+) antiporter, subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D PputUW4_04670 mviN; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PputUW4_00756 auxin efflux carrier K24180 mleP; malate permease and related proteins
D PputUW4_02579 Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein
D PputUW4_01141 potassium transporter K03549 kup; KUP system potassium uptake protein
D PputUW4_04370 lysE; amino acid transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PputUW4_04221 lysine exporter protein LysE/YggA K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PputUW4_05264 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein
D PputUW4_02904 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein
D PputUW4_03713 amino acid efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D PputUW4_02217 lysine exporter protein LysE/YggA K05835 rhtC; threonine efflux protein
D PputUW4_04544 lysine exporter protein LysE/YggA K05835 rhtC; threonine efflux protein
D PputUW4_03267 azlC; branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D PputUW4_03266 branched chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump
D PputUW4_01268 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PputUW4_02051 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PputUW4_03999 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PputUW4_01269 tctB; tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D PputUW4_02050 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PputUW4_03998 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PputUW4_01270 tctC; tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D PputUW4_02049 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PputUW4_03997 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PputUW4_01284 putative permease K03548 perM; putative permease
D PputUW4_00544 MarC family integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D PputUW4_04504 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PputUW4_04547 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PputUW4_05263 membrane protein K07243 FTR; high-affinity iron transporter
D PputUW4_03188 cstA1; carbon starvation protein CstA K23676 btsT; pyruvate/proton symporter
D PputUW4_04702 cstA2; carbon starvation protein CstA K23676 btsT; pyruvate/proton symporter
D PputUW4_05107 TonB-like protein K03832 tonB; periplasmic protein TonB
D PputUW4_05342 tonB; TonB-like protein K03832 tonB; periplasmic protein TonB
D PputUW4_00171 TonB-dependent membrane protein K03832 tonB; periplasmic protein TonB
D PputUW4_05244 TonB domain-containing protein K03832 tonB; periplasmic protein TonB
D PputUW4_04290 oprL; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D PputUW4_04292 tolA; TolA colicin import membrane protein K03646 tolA; colicin import membrane protein
D PputUW4_04291 tolB; translocation protein TolB K03641 tolB; TolB protein
D PputUW4_05099 mdcA; malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D PputUW4_05097 mdcC; malonate decarboxylase subunit delta K13931 mdcC; malonate decarboxylase delta subunit
D PputUW4_00124 multidrug efflux MFS membrane fusion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PputUW4_01592 emrA1; multidrug resistance protein (HlyD family), EmrA-like secretion K03543 emrA; membrane fusion protein, multidrug efflux system
D PputUW4_01894 multidrug resistance efflux protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PputUW4_03466 emrA2; multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system
D PputUW4_01720 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D PputUW4_02632 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D PputUW4_00117 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PputUW4_03953 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PputUW4_02536 RND family efflux transporter MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D PputUW4_01066 multidrug RND transporter, membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D PputUW4_04491 RND family multidrug transporter membrane fusion protein K21135 mexM; membrane fusion protein, multidrug efflux system
D PputUW4_02439 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01213 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_04378 RND family multidrug transporter membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_00178 multidrug RND transporter, membrane fusion protein K21136 triA; membrane fusion protein, multidrug efflux system
D PputUW4_00179 multidrug RND transporter, membrane fusion protein K21137 triB; membrane fusion protein, multidrug efflux system
D PputUW4_02140 RND family efflux transporter MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system
D PputUW4_02813 multidrug efflux system inner membrane protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D PputUW4_01574 Macrolide-specific efflux protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PputUW4_03537 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PputUW4_02491 pnuC; nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D PputUW4_03835 ccmF; cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PputUW4_02803 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PputUW4_01578 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PputUW4_03714 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D PputUW4_03487 copD; copper resistance protein D K07245 pcoD; copper resistance protein D
D PputUW4_03486 copC; copper resistance protein C K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:ppuu02044]
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_01721 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PputUW4_02633 prtD; type I secretion system ATPase PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PputUW4_01720 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D PputUW4_02632 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D PputUW4_01719 TolC family type I secretion outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D PputUW4_00116 type I secretion system ATPase family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PputUW4_03952 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PputUW4_00117 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PputUW4_03953 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PputUW4_00115 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PputUW4_03951 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PputUW4_03285 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D PputUW4_05224 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PputUW4_03290 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PputUW4_03298 gspF; type II secretion system protein K02455 gspF; general secretion pathway protein F
D PputUW4_03297 gspG2; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PputUW4_03283 type II secretion system protein G K02456 gspG; general secretion pathway protein G
D PputUW4_03284 type II secretory pathway pseudopilin PulG-like protein K02456 gspG; general secretion pathway protein G
D PputUW4_04642 pilD; type IV pilus prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PputUW4_04640 pilA; type IV pilus protein PilA K02650 pilA; type IV pilus assembly protein PilA
D PputUW4_04641 pilC; type 4 fimbrial assembly protein K02653 pilC; type IV pilus assembly protein PilC
D PputUW4_04658 pilE; type IV pilus biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
D PputUW4_00937 pilF; type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D PputUW4_05105 pilG; type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PputUW4_05104 pilH; type IV pilus response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PputUW4_05103 pilI; type IV pilus biogenesis protein PilI K02659 pilI; twitching motility protein PilI
D PputUW4_05102 pilJ; type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ
D PputUW4_00344 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PputUW4_00345 pilN; type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D PputUW4_00346 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PputUW4_00347 pilP; type 4 fimbrial biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PputUW4_00348 pilQ; type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D PputUW4_05115 pilT; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D PputUW4_04662 pilV; type IV pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV
D PputUW4_04661 pilW; type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D PputUW4_04660 pilX; type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D PputUW4_04664 fimT2; type IV pilus related protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D PputUW4_04663 fimT1; type IV pilus related protein K08085 fimU; type IV fimbrial biogenesis protein FimU
D PputUW4_03444 LysM domain-containing protein K08086 fimV; pilus assembly protein FimV
D PputUW4_04077 cpaA; Flp pilus assembly protein, protease CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PputUW4_04075 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PputUW4_04065 cpaC; Flp pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D PputUW4_04071 cpaE; Flp pilus assembly protein, ATPase CpaE K02282 cpaE; pilus assembly protein CpaE
D PputUW4_04070 cpaF; Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PputUW4_04069 tadB; Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PputUW4_04068 tadC; Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PputUW4_04066 TPR domain-containing protein K27079 tadD; tight adherence protein D
D PputUW4_04078 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PputUW4_05118 hypothetical protein K02221 yggT; YggT family protein
D PputUW4_01381 competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA
D PputUW4_04054 competence protein K02238 comEC; competence protein ComEC
D PputUW4_03616 prgI; type III secretion cytoplasmic protein K03221 yscF; type III secretion protein F
D PputUW4_03629 spaO; surface presentation of antigens protein K03225 yscQ; type III secretion protein Q
D PputUW4_03634 invA; invasion protein K03230 yscV; type III secretion protein V
D PputUW4_03636 invG; invasion protein K22504 invG; type III secretion system outer membrane ring protein
D PputUW4_03614 prgK; type III secretion apparatus lipoprotein K22505 prgK; type III secretion system inner membrane ring protein
D PputUW4_03632 invC; secretory apparatus ATP synthase K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D PputUW4_03628 spaP; surface presentation of antigens protein K22507 spaP; type III secretion system export apparatus protein
D PputUW4_03627 spaQ; surface presentation of antigens protein K22508 spaQ; type III secretion system export apparatus protein
D PputUW4_03626 spaR; surface presentation of antigens protein K22509 spaR; type III secretion system export apparatus protein
D PputUW4_03625 spaS; surface presentation of antigens protein K22510 spaS; type III secretion system export apparatus switch protein
D PputUW4_03635 invE; invasion protein K22511 invE; type III secretion system protein
D PputUW4_03633 invB; invasion protein K22512 spaK; type III secretion system chaperone
D PputUW4_03631 invI; type III secretion system secretory apparatus K22513 spaM; type III secretion system protein
D PputUW4_03617 prgH; type III secretion system needle complex protein K22488 prgH; type III secretion system protein
D PputUW4_03615 prgJ; type III secretion system needle complex protein K22487 prgJ; type III secretion system protein
D PputUW4_03861 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PputUW4_03862 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PputUW4_03842 FlhB domain-containing protein K04061 flhB2; flagellar biosynthesis protein
D PputUW4_03847 FlhB domain-containing protein K04061 flhB2; flagellar biosynthesis protein
D PputUW4_03878 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PputUW4_03876 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D PputUW4_03875 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PputUW4_03867 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PputUW4_03866 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PputUW4_03865 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PputUW4_03864 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PputUW4_03863 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PputUW4_04428 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PputUW4_04920 estA; esterase EstA K12686 apeE; outer membrane lipase/esterase
D PputUW4_03077 tssM; ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL
D PputUW4_03087 tssL; DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D PputUW4_03088 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ
D PputUW4_03074 type VI secretion protein K11895 impH; type VI secretion system protein ImpH
D PputUW4_03075 type VI secretion protein K11896 impG; type VI secretion system protein ImpG
D PputUW4_03089 tssC; EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC
D PputUW4_03090 tssB; type VI secretion protein K11901 impB; type VI secretion system protein ImpB
D PputUW4_03085 hcp; type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D PputUW4_01750 vgrG2; Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_00562 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_03279 vgrG3; type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_03083 vgrG1; type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PputUW4_03072 tssE; type VI secretion system lysozyme-like protein K11905 K11905; type VI secretion system protein
D PputUW4_03073 tssJ; type VI secretion lipoprotein K11906 vasD; type VI secretion system protein VasD
D PputUW4_03084 clpV; ClpV1 family type VI secretion ATPase K11907 vasG; type VI secretion system protein VasG
D PputUW4_03076 type VI secretion-associated protein K11910 vasJ; type VI secretion system protein VasJ
D PputUW4_03071 type VI secretion system OmpA/MotB domain-containing protein K11911 vasL; type VI secretion system protein VasL
D PputUW4_00998 hypothetical protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D PputUW4_01491 hypothetical protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D PputUW4_00996 hypothetical protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D PputUW4_04316 secA2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PputUW4_00279 secB; preprotein translocase subunit K03071 secB; preprotein translocase subunit SecB
D PputUW4_00920 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PputUW4_04897 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PputUW4_00921 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PputUW4_00703 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PputUW4_04864 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PputUW4_04434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PputUW4_05135 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PputUW4_00919 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PputUW4_05440 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PputUW4_00321 tatA; sec-independent translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D PputUW4_00320 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PputUW4_00319 tatC; Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ppuu02042]
D PputUW4_02798 YD repeat-containing protein K11021 tccC; insecticidal toxin complex protein TccC
D PputUW4_02807 YD repeat-containing protein K11021 tccC; insecticidal toxin complex protein TccC
D PputUW4_01929 hypothetical protein K11021 tccC; insecticidal toxin complex protein TccC
D PputUW4_04436 corB; CBS (cystathionine beta-synthase) domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PputUW4_05356 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PputUW4_05089 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ppuu02022]
D PputUW4_05355 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PputUW4_05354 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PputUW4_04127 phoQ; sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PputUW4_04128 phoP; DNA-binding response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PputUW4_00206 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PputUW4_00205 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PputUW4_04131 rstB; sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PputUW4_04132 rstA; DNA-binding response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D PputUW4_03930 two component transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PputUW4_05001 creC; sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D PputUW4_05002 creB; DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D PputUW4_02046 czcS; heavy metal sensor signal transduction histidine kinase (STHK) K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_04494 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_03501 cinS; heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_02047 czcR; two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_04493 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_03500 cinR; two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_02689 sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_01498 periplasmic sensor Signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PputUW4_02690 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PputUW4_01497 qseB; two component transcriptional regulatorn QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D PputUW4_01394 kdpD; osmosensitive K+ channel Signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PputUW4_01395 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PputUW4_01272 periplasmic sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PputUW4_01271 tctD; DNA-binding response regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D PputUW4_04110 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PputUW4_04111 two component transcriptional regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D PputUW4_02441 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PputUW4_03932 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PputUW4_02440 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_01935 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_02003 OmpR family response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_04260 two-component Response regulator, OmpR family K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_02756 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_02758 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_01610 Response regulator, OmpR family K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_00882 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D PputUW4_04447 LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PputUW4_04112 gacS; multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PputUW4_02386 gacA; DNA-binding response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PputUW4_01449 multi-sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PputUW4_01581 Hpt sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PputUW4_04400 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01580 putative transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01450 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_00570 PAS/PAC sensor signal transduction histidine kinase K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D PputUW4_03189 two-component sensory histidine protein kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PputUW4_01467 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PputUW4_05276 algR; two-component response regulator AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR
D PputUW4_00283 ntrB; Signal transduction histidine kinase,nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PputUW4_00282 ntrC; nitrogen metabolism transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PputUW4_04628 two-component response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D PputUW4_04656 pilR; two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D PputUW4_00232 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PputUW4_04342 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PputUW4_00231 sigma-54 dependent DNA-binding response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PputUW4_04343 sigma-54 dependent DNA-binding response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PputUW4_00079 kinB; alginate biosynthesis sensor protein K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D PputUW4_00080 algB; alginate biosynthesis transcriptional regulatory protein K11384 algB; two-component system, NtrC family, response regulator AlgB
D PputUW4_03855 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PputUW4_03857 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PputUW4_02523 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_03854 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_00847 cheV1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_04139 cheV3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_01469 cheV2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_05101 pilL; type IV pili sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PputUW4_05105 pilG; type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PputUW4_05104 pilH; type IV pilus response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PputUW4_01044 wspE; Sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PputUW4_01046 wspR; response regulator WspR K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D PputUW4_01045 wspF; chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D PputUW4_02525 cheY1; chemotaxis protein CheY K13589 cpdR; two-component system, cell cycle response regulator CpdR
D PputUW4_03881 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PputUW4_03880 atoC; Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D PputUW4_01019 periplasmic sensor signal transduction histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D PputUW4_01018 two component, sigma-54 specific, Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D PputUW4_00748 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PputUW4_00749 two component Fis family transcriptional regulator K15012 regA; two-component system, response regulator RegA
D PputUW4_01445 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PputUW4_04098 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_02954 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PputUW4_03871 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D PputUW4_03872 response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PputUW4_03638 nasS; nitrate-binding protein NasS K22067 nasS; two-component system, oxyanion-binding sensor
D PputUW4_03639 nasT; response regulator, AmiR/NasR family K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D PputUW4_04757 periplasmic sensor hybrid histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D PputUW4_00545 periplasmic sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS
C 02035 Bacterial motility proteins [BR:ppuu02035]
D PputUW4_03855 cheA; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PputUW4_03849 cheW1; purine-binding chemotaxis protein CheW1 K03408 cheW; purine-binding chemotaxis protein CheW
D PputUW4_03850 cheW2; CheW domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D PputUW4_02522 chemotaxis protein methyltransferase, CheR-like protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PputUW4_04138 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PputUW4_02523 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_03854 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PputUW4_03857 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PputUW4_03856 cheZ; chemotaxis phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D PputUW4_00847 cheV1; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_04139 cheV3; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_01469 cheV2; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PputUW4_00576 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04549 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00629 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02226 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04593 chemotaxis sensory transducer, Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00716 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01613 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04081 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02571 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04207 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00294 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00300 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00317 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01899 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_02634 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04230 Pas/Pac sensor-containing chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_01939 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04270 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_00385 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_04319 chemotaxis sensory transducer, Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D PputUW4_03556 aer; aerotaxis receptor K03776 aer; aerotaxis receptor
D PputUW4_03876 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D PputUW4_03875 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PputUW4_03874 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D PputUW4_03866 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PputUW4_03865 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PputUW4_03864 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PputUW4_03863 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PputUW4_03861 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PputUW4_03862 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PputUW4_03877 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PputUW4_03868 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PputUW4_03867 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PputUW4_03878 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PputUW4_03908 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PputUW4_04140 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PputUW4_03909 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PputUW4_05242 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL
D PputUW4_03869 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PputUW4_03879 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PputUW4_03870 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PputUW4_04137 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PputUW4_04136 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PputUW4_04135 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PputUW4_03911 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PputUW4_03910 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PputUW4_03907 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PputUW4_04134 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PputUW4_03906 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PputUW4_03905 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PputUW4_04142 flgN; flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PputUW4_04403 OmpA family outer membrane protein K21218 motY; sodium-type flagellar protein MotY
D PputUW4_03887 flagellin K02406 fliC; flagellin
D PputUW4_03885 fliD; flagellar hook associated protein K02407 fliD; flagellar hook-associated protein 2
D PputUW4_03884 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PputUW4_03883 hypothetical protein K02423 fliT; flagellar protein FliT
D PputUW4_03858 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PputUW4_03853 motA2; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PputUW4_00438 motA1; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PputUW4_03852 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PputUW4_00439 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PputUW4_03882 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PputUW4_03881 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PputUW4_03880 atoC; Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D PputUW4_05184 extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_00192 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein
D PputUW4_04141 flgM; anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PputUW4_03886 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D PputUW4_03860 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D PputUW4_03415 flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D PputUW4_03859 fleN; flagellar number regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D PputUW4_05105 pilG; type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PputUW4_05104 pilH; type IV pilus response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PputUW4_05103 pilI; type IV pilus biogenesis protein PilI K02659 pilI; twitching motility protein PilI
D PputUW4_05102 pilJ; type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ
D PputUW4_05101 pilL; type IV pili sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PputUW4_04656 pilR; two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D PputUW4_05115 pilT; pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D PputUW4_05100 chpC; chemosensory protein ChpC K06598 chpC; chemosensory pili system protein ChpC
D PputUW4_04640 pilA; type IV pilus protein PilA K02650 pilA; type IV pilus assembly protein PilA
D PputUW4_04641 pilC; type 4 fimbrial assembly protein K02653 pilC; type IV pilus assembly protein PilC
D PputUW4_04642 pilD; type IV pilus prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PputUW4_00937 pilF; type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D PputUW4_00348 pilQ; type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D PputUW4_00347 pilP; type 4 fimbrial biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PputUW4_00346 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PputUW4_00345 pilN; type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D PputUW4_00344 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PputUW4_04662 pilV; type IV pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV
D PputUW4_04661 pilW; type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D PputUW4_04660 pilX; type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D PputUW4_04658 pilE; type IV pilus biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
D PputUW4_04078 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PputUW4_04077 cpaA; Flp pilus assembly protein, protease CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PputUW4_04075 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PputUW4_04065 cpaC; Flp pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D PputUW4_04071 cpaE; Flp pilus assembly protein, ATPase CpaE K02282 cpaE; pilus assembly protein CpaE
D PputUW4_04070 cpaF; Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ppuu04812]
D PputUW4_00763 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PputUW4_04498 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PputUW4_04499 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PputUW4_03725 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D PputUW4_03726 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PputUW4_03727 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PputUW4_00378 ParA family protein K03496 parA; chromosome partitioning protein
D PputUW4_03851 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D PputUW4_05436 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PputUW4_02668 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D PputUW4_05435 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ppuu04147]
D PputUW4_03790 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PputUW4_01108 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PputUW4_04263 gap2; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_03509 gap1; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PputUW4_05064 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PputUW4_04336 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03823 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PputUW4_03982 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PputUW4_05027 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PputUW4_01570 pvdM; dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PputUW4_04406 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PputUW4_04386 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PputUW4_00690 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PputUW4_04634 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PputUW4_03011 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PputUW4_00979 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PputUW4_04886 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PputUW4_04911 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PputUW4_03234 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PputUW4_04241 fadD1; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04242 fadD2; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_04092 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PputUW4_01994 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01654 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_00575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_03684 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_02464 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01695 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_01593 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PputUW4_05078 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PputUW4_01058 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PputUW4_03573 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PputUW4_05277 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PputUW4_04402 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PputUW4_03162 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PputUW4_02928 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PputUW4_00826 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PputUW4_00292 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PputUW4_02799 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PputUW4_04416 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PputUW4_05201 glnA5; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_05203 glnA6; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03105 puuA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_03244 glnA3; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_04145 glnA4; L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_00285 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01890 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_02765 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01296 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PputUW4_01623 hemB1; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PputUW4_05258 hemB2; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PputUW4_02423 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PputUW4_03914 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PputUW4_05182 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PputUW4_00547 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PputUW4_02965 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_05411 lpdA3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_03799 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PputUW4_01321 etfA1; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D PputUW4_03341 etfA2; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D PputUW4_02479 zwf1; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PputUW4_04250 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PputUW4_00702 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PputUW4_00296 blc; outer membrane lipoprotein blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:ppuu02048]
D PputUW4_04188 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PputUW4_04192 5-methylcytosine-specific restriction enzyme K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PputUW4_00674 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D PputUW4_00638 ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D PputUW4_00673 5-methylcytosine-specific restriction protein C K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D PputUW4_00639 McrBC 5-methylcytosine restriction system component-like protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D PputUW4_03489 relE2; addiction module toxin RelE K06218 relE; mRNA interferase RelE/StbE
D PputUW4_00131 relE1; stability cassette protein K06218 relE; mRNA interferase RelE/StbE
D PputUW4_05029 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D PputUW4_03488 relB; bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PputUW4_00130 prevent-host-death family protein K18923 stbD; antitoxin StbD
D PputUW4_00887 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D PputUW4_00888 prevent-host-death family protein K19159 yefM; antitoxin YefM
D PputUW4_00161 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PputUW4_00213 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PputUW4_00634 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PputUW4_00160 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PputUW4_02563 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D PputUW4_02564 addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4
D PputUW4_05298 higB; plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D PputUW4_05297 virulence-associated protein K21498 higA-1; antitoxin HigA-1
D PputUW4_00253 virulence-associated protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D PputUW4_00254 virulence-associated protein K18829 mvpT; antitoxin VapB
D PputUW4_00628 PilT domain-containing protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D PputUW4_00627 hypothetical protein K21495 fitA; antitoxin FitA
D PputUW4_04498 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PputUW4_00763 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PputUW4_00431 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PputUW4_00428 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PputUW4_03465 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PputUW4_01276 hypothetical protein K19168 cptA; toxin CptA
D PputUW4_01275 hypothetical protein K09159 cptB; antitoxin CptB
D PputUW4_00928 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PputUW4_01513 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:ppuu04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ppuu04090]
C 01504 Antimicrobial resistance genes [BR:ppuu01504]
D PputUW4_02412 transporter-like membrane protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PputUW4_02046 czcS; heavy metal sensor signal transduction histidine kinase (STHK) K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_04494 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_03501 cinS; heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PputUW4_02047 czcR; two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_04493 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_03500 cinR; two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PputUW4_02537 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_01291 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_03308 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_01928 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PputUW4_04307 oprD3; outer membrane protein D K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PputUW4_01861 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PputUW4_01143 transmembrane acid tolerance protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PputUW4_04127 phoQ; sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PputUW4_04128 phoP; DNA-binding response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PputUW4_02439 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01213 multidrug efflux RND membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_04378 RND family multidrug transporter membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PputUW4_01212 multidrug efflux RND inner membrane transporter K18138 acrB; multidrug efflux pump
D PputUW4_04379 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D PputUW4_02438 multidrug efflux system transmembrane protein K18138 acrB; multidrug efflux pump
D PputUW4_01211 multidrug efflux RND outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D PputUW4_02536 RND family efflux transporter MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D PputUW4_02535 mexF; multidrug efflux RND transporter permease MexF K18299 mexF; multidrug efflux pump
D PputUW4_02534 multidrug efflux system outer membrane protein K18300 oprN; outer membrane protein, multidrug efflux system
D PputUW4_01065 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D PputUW4_01066 multidrug RND transporter, membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D PputUW4_01067 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D PputUW4_02139 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D PputUW4_01561 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_00578 cueR; MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_03359 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_00610 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PputUW4_00420 tolC; outer membrane protein TolC K12340 tolC; outer membrane protein
D PputUW4_04400 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01580 putative transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_01450 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PputUW4_02451 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppuu00537]
D PputUW4_05027 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PputUW4_01570 pvdM; dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ppuu03100]
D PputUW4_R0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0091 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0078 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PputUW4_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0069 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PputUW4_R0059 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PputUW4_R0084 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PputUW4_R0052 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0053 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0061 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PputUW4_R0041 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PputUW4_R0044 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PputUW4_R0074 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PputUW4_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0068 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0057 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0066 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PputUW4_R0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0067 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0065 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0087 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0028 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PputUW4_R0036 tRNA-His K14226 tRNA-His; tRNA His
D PputUW4_R0038 tRNA-His K14226 tRNA-His; tRNA His
D PputUW4_R0002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0013 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0021 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0031 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0079 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0092 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0048 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PputUW4_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0042 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PputUW4_R0073 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PputUW4_R0082 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PputUW4_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0075 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0094 tRNA-Met K14230 tRNA-Met; tRNA Met
D PputUW4_R0009 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PputUW4_R0050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PputUW4_R0081 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PputUW4_R0083 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PputUW4_R0060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0072 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PputUW4_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PputUW4_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PputUW4_R0086 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PputUW4_R0085 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PputUW4_R0088 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PputUW4_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0064 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0062 tRNA-Val K14237 tRNA-Val; tRNA Val
D PputUW4_R0043 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PputUW4_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0080 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0093 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PputUW4_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0090 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0077 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PputUW4_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0076 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0089 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PputUW4_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PputUW4_05035 hbd; 3-hydroxybutyryl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D PputUW4_01582 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D PputUW4_04924 eutG; Iron-containing alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-]
D PputUW4_02503 dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PputUW4_05143 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PputUW4_02298 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PputUW4_01739 NAD-dependent aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PputUW4_02082 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PputUW4_03197 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D PputUW4_01742 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PputUW4_03576 zinc-containing alcohol dehydrogenase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D PputUW4_04967 pqqC2; pyrroloquinoline quinone biosynthesis proteinPqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D PputUW4_02940 pqqC1; pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D PputUW4_02894 iorA1; isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PputUW4_04046 iorA2; isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PputUW4_02893 iorB1; isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PputUW4_04045 iorB2; isoquinoline 1-oxidoreductase, beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PputUW4_03033 NADP oxidoreductase, coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D PputUW4_01319 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PputUW4_04567 FAD dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D PputUW4_00020 qor1; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PputUW4_05243 qor4; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PputUW4_00893 qor2; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PputUW4_01516 zinc-containing alcohol dehydrogenase superfamily protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PputUW4_00615 NAD(P)H dehydrogenase (quinone) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D PputUW4_00500 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PputUW4_03978 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PputUW4_02496 azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PputUW4_02417 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D PputUW4_00391 msrA1; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PputUW4_02115 msrA3; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PputUW4_00884 msrA2; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PputUW4_00883 msrB1; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PputUW4_01442 msrB2; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PputUW4_03237 gst; glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PputUW4_04088 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PputUW4_01622 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PputUW4_03204 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PputUW4_01836 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PputUW4_04609 yedY; sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PputUW4_01744 cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D PputUW4_03310 non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PputUW4_02244 cpo; chloride peroxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PputUW4_01285 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PputUW4_02814 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PputUW4_05215 lsfA; peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PputUW4_03122 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PputUW4_02416 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PputUW4_00089 osmC; Peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PputUW4_02032 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PputUW4_03179 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PputUW4_02698 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PputUW4_02699 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PputUW4_01427 ohr; organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PputUW4_02314 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PputUW4_03315 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PputUW4_02542 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PputUW4_01585 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PputUW4_00169 atsK; alkylsulfatase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D PputUW4_00727 putative hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D PputUW4_00849 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PputUW4_01576 pvdA; L-ornithine 5-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D PputUW4_00186 DszA family monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D PputUW4_02664 FMN-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D PputUW4_03240 luciferase-like monooxygenase family protein K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]
D PputUW4_01904 multicopper oxidase type 2 K22350 mcoA; manganese oxidase [EC:1.16.3.3]
D PputUW4_02679 multicopper oxidase type 2 K22350 mcoA; manganese oxidase [EC:1.16.3.3]
D PputUW4_04706 fpr2; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PputUW4_01134 fpr1; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PputUW4_04117 arsC3; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PputUW4_04443 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D PputUW4_02249 arsC1; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PputUW4_04969 pqqE2; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D PputUW4_02938 pqqE1; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D PputUW4_01117 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PputUW4_02981 cfa1; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PputUW4_05406 cfa2; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PputUW4_01248 tam; trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D PputUW4_00405 carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PputUW4_05093 mdcH; acyl-carrier-protein S-malonyltransferase K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D PputUW4_03475 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D PputUW4_03987 fabH2; 3-oxoacyl-(acyl carrier protein) synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D PputUW4_04767 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PputUW4_01220 acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D PputUW4_01139 GCN5-related N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PputUW4_00515 phosphinothricin acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PputUW4_01828 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PputUW4_01827 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PputUW4_05098 mdcB; triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D PputUW4_01130 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PputUW4_03954 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PputUW4_05169 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PputUW4_03508 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PputUW4_03654 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PputUW4_01340 polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D PputUW4_00396 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PputUW4_05094 mdcG; phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D PputUW4_00380 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PputUW4_03989 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D PputUW4_04422 frc; formyl-coenzyme A transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D PputUW4_02301 phaZ2; poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76]
D PputUW4_00332 phaZ1; Poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76]
D PputUW4_05036 hypothetical protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D PputUW4_00220 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PputUW4_00368 4-hydroxybenzoyl-CoA thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PputUW4_03462 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PputUW4_03926 phosphotransferase domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PputUW4_04093 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PputUW4_02421 diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PputUW4_00078 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PputUW4_00025 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D PputUW4_01730 metallo-beta-lactamase family protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D PputUW4_03406 endA2; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PputUW4_02640 endA1; deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PputUW4_00717 TatD-like deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PputUW4_01402 tatD; deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PputUW4_04026 TatD-like deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PputUW4_00820 amiD2; N-acetylmuramoyl-L-alanine amidase AmiD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PputUW4_00618 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D PputUW4_00016 def1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PputUW4_04237 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PputUW4_02454 pvdQ; acyl-homoserine lactone acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D PputUW4_01158 peptidase S45, penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D PputUW4_01010 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K18540 ramA; (R)-amidase [EC:3.5.1.100]
D PputUW4_00769 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PputUW4_03196 3-oxoadipate enol-lactonase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-]
D PputUW4_00590 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D PputUW4_04038 maf2; Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D PputUW4_02844 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PputUW4_04332 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PputUW4_02818 MoxR domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PputUW4_00902 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D PputUW4_00174 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D PputUW4_05096 mdcD; malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D PputUW4_05095 mdcE; malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D PputUW4_00447 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PputUW4_01080 class V aminotransferase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D PputUW4_03348 phenylacetaldoxime dehydratase K13028 oxdA; aliphatic aldoxime dehydratase [EC:4.8.1.2]
D PputUW4_02972 FKBP-type peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PputUW4_04258 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D PputUW4_02171 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D PputUW4_04798 mpl; UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PputUW4_04395 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PputUW4_04394 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PputUW4_03568 ccoI; copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PputUW4_05166 cadA1; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PputUW4_01577 mgtA; magnesium-transporting ATPase MgtA K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D PputUW4_04622 sfsA; sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D PputUW4_00679 glycolate oxidase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PputUW4_00678 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PputUW4_00677 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PputUW4_00223 fdhD1; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D PputUW4_03063 fdhD2; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D PputUW4_01120 fdxA; ferredoxin K05524 fdxA; ferredoxin
D PputUW4_04396 rnfG; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PputUW4_04397 rnfE; electron transport complex protein rnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PputUW4_04393 rnfA; electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PputUW4_00816 flavodoxin K06205 mioC; MioC protein
D PputUW4_00929 iscU; FeS cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PputUW4_03381 citB; citrate utilization protein B K13795 citB; citrate/tricarballylate utilization protein
D PputUW4_03380 tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase
D PputUW4_01320 etfB1; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D PputUW4_03340 etfB2; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D PputUW4_00092 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D PputUW4_04756 acyl-CoA dehydrogenase-like protein K09456 aidB; putative acyl-CoA dehydrogenase
D PputUW4_05155 hypothetical protein K21830 pchP; phosphorylcholine phosphatase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PputUW4_00804 cysZ; sulfate transport protein CysZ K06203 cysZ; CysZ protein
D PputUW4_05116 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PputUW4_04474 algK; alginate biosynthesis protein AlgK K19292 algK; alginate biosynthesis protein AlgK
D PputUW4_04848 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D PputUW4_04322 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PputUW4_02361 cobW1; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D PputUW4_05272 hemY; HemY protein K02498 hemY; HemY protein
D PputUW4_00324 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D PputUW4_00325 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PputUW4_05295 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PputUW4_02364 chlD; magnesium chelatase subunit ChlD K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D PputUW4_02873 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PputUW4_03305 DoxX family protein K15977 K15977; putative oxidoreductase
D PputUW4_01404 DoxX family protein K15977 K15977; putative oxidoreductase
D PputUW4_02271 DoxX family protein K15977 K15977; putative oxidoreductase
D PputUW4_03018 DoxX family protein K15977 K15977; putative oxidoreductase
D PputUW4_04459 estB; carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D PputUW4_03206 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PputUW4_01823 cspD; cold-shock protein CspD K03704 cspA; cold shock protein
D PputUW4_03392 capA; cold shock protein CapA K03704 cspA; cold shock protein
D PputUW4_01150 capB; cold shock protein CapB K03704 cspA; cold shock protein
D PputUW4_01073 cspA; cold shock protein CspA K03704 cspA; cold shock protein
D PputUW4_04284 temperature acclimation protein B K03704 cspA; cold shock protein
D PputUW4_04303 cspC; cold-shock DNA-binding protein K03704 cspA; cold shock protein
D PputUW4_05270 anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D
D PputUW4_05294 glnK; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D PputUW4_00204 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D PputUW4_04115 hslJ; heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D PputUW4_01824 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PputUW4_01709 tig; trigger factor K03545 tig; trigger factor
D PputUW4_04608 yedZ; sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PputUW4_02560 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D PputUW4_00493 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D PputUW4_00492 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D PputUW4_00491 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D PputUW4_00517 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D PputUW4_00490 hupE; HupE/UreJ protein K03192 ureJ; urease accessory protein
D PputUW4_00682 smpB; ssrA-binding protein K03664 smpB; SsrA-binding protein
D PputUW4_05299 magnesium chelatase K07391 comM; magnesium chelatase family protein
D PputUW4_05186 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D PputUW4_00239 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D PputUW4_01347 protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D PputUW4_04914 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D PputUW4_03787 OsmC-like protein K07397 yhfA; putative redox protein
D PputUW4_02356 Fe/S biogenesis protein K07400 nfuA; Fe/S biogenesis protein NfuA
D PputUW4_03941 SelT/selW/selH selenoprotein K07401 K07401; selenoprotein W-related protein
D PputUW4_02618 xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D PputUW4_03418 xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D PputUW4_03601 xdhC1; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D PputUW4_04044 xdhC2; xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D PputUW4_01628 glutathione S-transferase-like protein K11208 yncG; GST-like protein
C 99976 Replication and repair
D PputUW4_01148 methylated-DNA-(protein)-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PputUW4_05323 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PputUW4_03756 DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D PputUW4_03167 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PputUW4_04517 hypothetical protein K07460 yraN; putative endonuclease
D PputUW4_04445 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D PputUW4_00018 smf; SMF protein K04096 smf; DNA processing protein
D PputUW4_01832 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D PputUW4_03587 transposon resolvase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D PputUW4_00316 transposase IS116/IS110/IS902 K07486 K07486; transposase
D PputUW4_03446 IS110 family transposase K07486 K07486; transposase
D PputUW4_04223 IS110 family transposase K07486 K07486; transposase
D PputUW4_01993 IS110 family transposase K07486 K07486; transposase
D PputUW4_02021 IS110 family transposase K07486 K07486; transposase
D PputUW4_05131 IS110 family transposase K07486 K07486; transposase
D PputUW4_01251 transposase, IS110 family K07486 K07486; transposase
D PputUW4_00472 transposase, IS110 family K07486 K07486; transposase
D PputUW4_04440 IS110 family transposase K07486 K07486; transposase
D PputUW4_05207 IS110 family transposase K07486 K07486; transposase
D PputUW4_05330 IS110 family transposase K07486 K07486; transposase
D PputUW4_02996 IS110 family transposase K07486 K07486; transposase
D PputUW4_04586 IS110 family transposase K07486 K07486; transposase
D PputUW4_05358 IS110 family transposase K07486 K07486; transposase
D PputUW4_03127 IS110 family transposase K07486 K07486; transposase
D PputUW4_00838 transposase, IS110 family K07486 K07486; transposase
D PputUW4_03192 IS110 family transposase K07486 K07486; transposase
D PputUW4_05152 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D PputUW4_01499 IS3 family transposase K07497 K07497; putative transposase
D PputUW4_04236 IS3 family transposase K07497 K07497; putative transposase
D PputUW4_01772 integrase catalytic protein K07497 K07497; putative transposase
D PputUW4_02011 IS3 family transposase K07497 K07497; putative transposase
D PputUW4_04344 IS3 family transposase K07497 K07497; putative transposase
D PputUW4_03138 IS3 family transposase K07497 K07497; putative transposase
D PputUW4_03920 IS3 family transposase K07497 K07497; putative transposase
D PputUW4_00149 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PputUW4_03577 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PputUW4_05076 formate/nitrate transporter K21990 yfdC; formate-nitrite transporter family protein
D PputUW4_01003 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PputUW4_00030 citN; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D PputUW4_03374 citA2; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D PputUW4_03012 citA1; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D PputUW4_03959 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PputUW4_00683 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PputUW4_03328 amino acid transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PputUW4_05374 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PputUW4_03796 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PputUW4_03750 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PputUW4_02927 transporter membrane protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_03243 purine-cytosine permease-like protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_01859 permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_03666 cytosine/purines, uracil, thiamine, allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_01853 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_01869 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_02214 cytosine/purines uracil thiamine allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_00422 permease for cytosine/purines,uracil,thiamine,allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PputUW4_01370 hypothetical protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D PputUW4_03927 intracellular septation protein A K06190 ispZ; intracellular septation protein
D PputUW4_03205 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB
D PputUW4_04944 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D PputUW4_00275 peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PputUW4_04619 TfoX domain-containing protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D PputUW4_00715 ampE; inner membrane protein AmpE K03807 ampE; AmpE protein
D PputUW4_03525 universal stress protein K06149 uspA; universal stress protein A
D PputUW4_02828 universal stress family protein K14055 uspE; universal stress protein E
D PputUW4_02282 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_02284 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_02286 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_02288 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_02290 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_02913 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_02199 universal stress protein K14055 uspE; universal stress protein E
D PputUW4_00287 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D PputUW4_02779 CBS domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D PputUW4_04764 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PputUW4_04468 PhoH family protein K07175 phoH2; PhoH-like ATPase
D PputUW4_04942 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D PputUW4_04992 cyclic nucleotide-binding (cNMP-BD) protein K07182 K07182; CBS domain-containing protein
D PputUW4_03929 hypothetical protein K07184 ygiM; SH3 domain protein
D PputUW4_02527 kaiC; circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D PputUW4_04309 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PputUW4_01831 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D PputUW4_04580 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D PputUW4_03495 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PputUW4_03814 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PputUW4_01175 surface antigen protein K06077 slyB; outer membrane lipoprotein SlyB
D PputUW4_01726 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB
D PputUW4_01097 ompH; outer membrane protein OmpH K06142 hlpA; outer membrane protein
D PputUW4_01118 nlpD; Lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D PputUW4_04840 ompW; outer membrane protein W K07275 ompW; outer membrane protein
D PputUW4_04556 lipoprotein K07286 yajG; uncharacterized lipoprotein
D PputUW4_00264 AsmA family protein K07289 asmA; AsmA protein
D PputUW4_00496 AsmA family protein K07290 yhjG; AsmA family protein
D PputUW4_05226 hypothetical protein K07340 ybbJ; inner membrane protein
D PputUW4_02116 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D PputUW4_03251 SmpA/OmlA domain-containing protein K04064 osmE; osmotically inducible lipoprotein OsmE
D PputUW4_05000 creD; inner membrane protein K06143 creD; inner membrane protein
D PputUW4_03836 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PputUW4_03832 cycH; cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PputUW4_03833 ccmH; cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PputUW4_00938 XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ
D PputUW4_02532 hypothetical protein K21695 aaeX; protein AaeX
C 99994 Others
D PputUW4_05360 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D PputUW4_04407 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D PputUW4_00314 glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D PputUW4_04939 apaG; ApaG K06195 apaG; ApaG protein
D PputUW4_05284 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PputUW4_03160 FAD dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D PputUW4_04374 hypothetical protein K07231 K07231; putative iron-regulated protein
D PputUW4_03485 copB; copper resistance protein B K07233 pcoB; copper resistance protein B
D PputUW4_02895 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D PputUW4_01616 metallothionein K21904 smtA; metallothionein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PputUW4_03438 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D PputUW4_02770 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D PputUW4_04605 paraquat-inducible protein K06192 pqiB; paraquat-inducible protein B
D PputUW4_05056 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein
D PputUW4_04639 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PputUW4_02096 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PputUW4_04965 pqqA; pyrroloquinoline quinone biosynthesis protein PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D PputUW4_04966 pqqB2; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D PputUW4_02941 pqqB1; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D PputUW4_04968 pqqD2; pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D PputUW4_02939 pqqD1; pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D PputUW4_00664 putative helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PputUW4_01396 patatin K07001 K07001; NTE family protein
D PputUW4_03723 patatin K07001 K07001; NTE family protein
D PputUW4_04904 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D PputUW4_04238 ribonuclease BN K07058 K07058; membrane protein
D PputUW4_01902 phosphoribosyl transferase domain-containing protein K07100 K07100; putative phosphoribosyl transferase
D PputUW4_04388 fxsA; FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D PputUW4_01079 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D PputUW4_01346 hypothetical protein K07146 K07146; UPF0176 protein
D PputUW4_01818 hypothetical protein K07153 hflD; high frequency lysogenization protein
D PputUW4_01510 glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D PputUW4_03120 glcG; GlcG protein K11477 glcG; glc operon protein GlcG
D PputUW4_02248 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D PputUW4_01228 LemA family protein K03744 lemA; LemA protein
D PputUW4_04304 hypothetical protein K03745 slyX; SlyX protein
D PputUW4_04672 creA; CreA K05805 creA; CreA protein
D PputUW4_04123 SprT family peptidase K02742 sprT; SprT protein
D PputUW4_03439 argininosuccinate synthase K03749 dedD; DedD protein
D PputUW4_00351 damX; sporulation domain-containing protein K03112 damX; DamX protein
D PputUW4_04805 DedA family protein K03975 dedA; membrane-associated protein
D PputUW4_02768 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PputUW4_02769 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PputUW4_04606 pqiA1; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PputUW4_04607 pqiA2; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PputUW4_03409 hypothetical protein K08983 K08983; putative membrane protein
D PputUW4_01179 putative lipoprotein K08985 K08985; putative lipoprotein
D PputUW4_01230 hypothetical protein K08988 K08988; putative membrane protein
D PputUW4_01166 hypothetical protein K08993 yhhL; putative membrane protein
D PputUW4_01247 hypothetical protein K08995 K08995; putative membrane protein
D PputUW4_02340 hypothetical protein K08995 K08995; putative membrane protein
D PputUW4_01162 hypothetical protein K09858 K09858; SEC-C motif domain protein
D PputUW4_01071 lipoprotein K09914 K09914; putative lipoprotein
D PputUW4_04678 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D PputUW4_03694 ankyrin K06867 K06867; uncharacterized protein
D PputUW4_02592 Radical SAM domain protein K06871 K06871; uncharacterized protein
D PputUW4_02127 hypothetical protein K06871 K06871; uncharacterized protein
D PputUW4_01229 hypothetical protein K06872 K06872; uncharacterized protein
D PputUW4_01052 lipoprotein K06889 K06889; uncharacterized protein
D PputUW4_03124 hypothetical protein K06889 K06889; uncharacterized protein
D PputUW4_02265 alpha/beta fold family hydrolase K06889 K06889; uncharacterized protein
D PputUW4_03702 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D PputUW4_04849 hypothetical protein K06889 K06889; uncharacterized protein
D PputUW4_01446 hypothetical protein K06923 K06923; uncharacterized protein
D PputUW4_01028 ATPase-like protein K06926 K06926; uncharacterized protein
D PputUW4_02914 hypothetical protein K06938 K06938; uncharacterized protein
D PputUW4_00975 hypothetical protein K06938 K06938; uncharacterized protein
D PputUW4_02661 hypothetical protein K06938 K06938; uncharacterized protein
D PputUW4_05283 hypothetical protein K06938 K06938; uncharacterized protein
D PputUW4_01192 hypothetical protein K06940 K06940; uncharacterized protein
D PputUW4_05312 hypothetical protein K06940 K06940; uncharacterized protein
D PputUW4_01327 hypothetical protein K06940 K06940; uncharacterized protein
D PputUW4_00288 hypothetical protein K06940 K06940; uncharacterized protein
D PputUW4_04572 hypothetical protein K06940 K06940; uncharacterized protein
D PputUW4_04655 hypothetical protein K06950 K06950; uncharacterized protein
D PputUW4_02979 amine oxidase K06954 K06954; uncharacterized protein
D PputUW4_05156 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D PputUW4_01414 hypothetical protein K06975 K06975; uncharacterized protein
D PputUW4_04321 hypothetical protein K06986 K06986; uncharacterized protein
D PputUW4_04179 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D PputUW4_01154 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D PputUW4_03207 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D PputUW4_03171 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D PputUW4_02221 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D PputUW4_02890 glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D PputUW4_02638 glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D PputUW4_02486 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein
D PputUW4_05319 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_00609 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_03144 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_03145 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_03154 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_02547 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_02212 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_02997 hypothetical protein K06995 K06995; uncharacterized protein
D PputUW4_00427 hypothetical protein K07000 K07000; uncharacterized protein
D PputUW4_02307 RND efflux transporter K07003 K07003; uncharacterized protein
D PputUW4_02591 RND efflux transporter K07003 K07003; uncharacterized protein
D PputUW4_00906 RND efflux transporter K07003 K07003; uncharacterized protein
D PputUW4_02863 RND efflux transporter K07003 K07003; uncharacterized protein
D PputUW4_05416 oxidoreductase, FAD-binding protein K07006 K07006; uncharacterized protein
D PputUW4_04536 hypothetical protein K07018 K07018; uncharacterized protein
D PputUW4_05139 Alpha/beta hydrolase fold protein K07019 K07019; uncharacterized protein
D PputUW4_03557 hypothetical protein K07020 K07020; uncharacterized protein
D PputUW4_04617 hypothetical protein K07028 K07028; uncharacterized protein
D PputUW4_03945 YgfB and YecA K07039 K07039; uncharacterized protein
D PputUW4_04727 hypothetical protein K07054 K07054; uncharacterized protein
D PputUW4_00042 hypothetical protein K07070 K07070; uncharacterized protein
D PputUW4_04566 hypothetical protein K07071 K07071; uncharacterized protein
D PputUW4_05170 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_00260 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_02786 membrane protein K07090 K07090; uncharacterized protein
D PputUW4_01634 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_00950 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_02957 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_02259 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_00613 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_01430 hypothetical protein K07090 K07090; uncharacterized protein
D PputUW4_04986 twin-arginine translocation pathway signal protein K07093 K07093; uncharacterized protein
D PputUW4_02670 phosphoesterase K07095 K07095; uncharacterized protein
D PputUW4_02629 hypothetical protein K07112 K07112; uncharacterized protein
D PputUW4_02630 hypothetical protein K07112 K07112; uncharacterized protein
D PputUW4_04597 hypothetical protein K07117 K07117; uncharacterized protein
D PputUW4_00027 hypothetical protein K07118 K07118; uncharacterized protein
D PputUW4_01267 ammonia monooxygenase family protein K07120 K07120; uncharacterized protein
D PputUW4_04516 lppC; lipoprotein K07121 K07121; uncharacterized protein
D PputUW4_01382 Short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D PputUW4_02156 Short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D PputUW4_04910 Short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D PputUW4_01923 Short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D PputUW4_00728 Sel1 repeat-containing protein K07126 K07126; uncharacterized protein
D PputUW4_04761 Sel1 repeat-containing protein K07126 K07126; uncharacterized protein
D PputUW4_03276 lipoprotein K07126 K07126; uncharacterized protein
D PputUW4_03277 lipoprotein K07126 K07126; uncharacterized protein
D PputUW4_01178 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D PputUW4_01470 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D PputUW4_04790 peptidase S16, lon-like protein K07157 K07157; uncharacterized protein
D PputUW4_05441 hypothetical protein K08998 K08998; uncharacterized protein
D PputUW4_05119 hypothetical protein K09131 K09131; uncharacterized protein
D PputUW4_04778 hypothetical protein K09158 K09158; uncharacterized protein
D PputUW4_01303 hypothetical protein K09160 K09160; uncharacterized protein
D PputUW4_02980 hypothetical protein K09701 K09701; uncharacterized protein
D PputUW4_05262 hypothetical protein K09768 K09768; uncharacterized protein
D PputUW4_03928 YciI-like protein K09780 K09780; uncharacterized protein
D PputUW4_02733 hypothetical protein K09780 K09780; uncharacterized protein
D PputUW4_03815 hypothetical protein K09781 K09781; uncharacterized protein
D PputUW4_04943 hypothetical protein K09786 K09786; uncharacterized protein
D PputUW4_03946 hypothetical protein K09790 K09790; uncharacterized protein
D PputUW4_04269 hypothetical protein K09790 K09790; uncharacterized protein
D PputUW4_04050 hypothetical protein K09791 K09791; uncharacterized protein
D PputUW4_03570 hypothetical protein K09792 K09792; uncharacterized protein
D PputUW4_00273 hypothetical protein K09798 K09798; uncharacterized protein
D PputUW4_00685 hypothetical protein K09801 K09801; uncharacterized protein
D PputUW4_03473 hypothetical protein K09803 K09803; uncharacterized protein
D PputUW4_03967 RNA binding S1 K00243 K00243; uncharacterized protein
D PputUW4_02771 hypothetical protein K09857 K09857; uncharacterized protein
D PputUW4_00432 hypothetical protein K09857 K09857; uncharacterized protein
D PputUW4_04470 hypothetical protein K09861 K09861; uncharacterized protein
D PputUW4_04644 zinc-binding protein K09862 K09862; uncharacterized protein
D PputUW4_05236 hypothetical protein K09895 K09895; uncharacterized protein
D PputUW4_01335 hypothetical protein K09898 K09898; uncharacterized protein
D PputUW4_01300 hypothetical protein K09902 K09902; uncharacterized protein
D PputUW4_04537 hypothetical protein K09908 K09908; uncharacterized protein
D PputUW4_04103 hypothetical protein K09912 K09912; uncharacterized protein
D PputUW4_01649 hypothetical protein K09915 K09915; uncharacterized protein
D PputUW4_02868 hypothetical protein K09916 K09916; uncharacterized protein
D PputUW4_00830 YebG family protein K09918 K09918; uncharacterized protein
D PputUW4_03985 hypothetical protein K09919 K09919; uncharacterized protein
D PputUW4_00425 hypothetical protein K09920 K09920; uncharacterized protein
D PputUW4_05288 hypothetical protein K09921 K09921; uncharacterized protein
D PputUW4_03605 hypothetical protein K09923 K09923; uncharacterized protein
D PputUW4_01344 hypothetical protein K09924 K09924; uncharacterized protein
D PputUW4_03567 hypothetical protein K09926 K09926; uncharacterized protein
D PputUW4_01433 hypothetical protein K09927 K09927; uncharacterized protein
D PputUW4_04055 hypothetical protein K09928 K09928; uncharacterized protein
D PputUW4_02001 hypothetical protein K09929 K09929; uncharacterized protein
D PputUW4_02000 hypothetical protein K09930 K09930; uncharacterized protein
D PputUW4_03304 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D PputUW4_00812 hypothetical protein K09932 K09932; uncharacterized protein
D PputUW4_04812 hypothetical protein K09934 K09934; uncharacterized protein
D PputUW4_03783 hypothetical protein K09938 K09938; uncharacterized protein
D PputUW4_05331 hypothetical protein K09940 K09940; uncharacterized protein
D PputUW4_04739 periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein
D PputUW4_01240 hypothetical protein K09946 K09946; uncharacterized protein
D PputUW4_04377 hypothetical protein K09947 K09947; uncharacterized protein
D PputUW4_00808 hypothetical protein K09948 K09948; uncharacterized protein
D PputUW4_04839 lipoprotein K09950 K09950; uncharacterized protein
D PputUW4_05368 hypothetical protein K09950 K09950; uncharacterized protein
D PputUW4_04246 hypothetical protein K09954 K09954; uncharacterized protein
D PputUW4_02785 hypothetical protein K09958 K09958; uncharacterized protein
D PputUW4_02680 hypothetical protein K09962 K09962; uncharacterized protein
D PputUW4_04369 hypothetical protein K09964 K09964; uncharacterized protein
D PputUW4_01258 urea carboxylase-related aminomethyltransferase K09967 K09967; uncharacterized protein
D PputUW4_01259 urea carboxylase-related aminomethyltransferase K09967 K09967; uncharacterized protein
D PputUW4_00299 hypothetical protein K09975 K09975; uncharacterized protein
D PputUW4_02872 hypothetical protein K09977 K09977; uncharacterized protein
D PputUW4_01697 hypothetical protein K09983 K09983; uncharacterized protein
D PputUW4_04022 hypothetical protein K09986 K09986; uncharacterized protein
D PputUW4_04006 hypothetical protein K09989 K09989; uncharacterized protein
D PputUW4_02404 hypothetical protein K09990 K09990; uncharacterized protein
D PputUW4_04376 putative lipoprotein K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024