+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Rhodococcus erythropolis PR4

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E RER_37950 putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] E RER_24310 rnc; probable ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E RER_27330 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] E RER_20080 putative guanyl-specific ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] E RER_38630 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E RER_40940 deaD; probable ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E RER_37840 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E RER_42830 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E RER_26440 gpsI; guanosine pentaphosphate synthetase/polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E RER_39190 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C Other RNA degradation factors D Chaperones E RER_13510 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E RER_19240 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E RER_15260 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others E RER_24120 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E RER_25780 putative polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E RER_15330 putative polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E RER_45880 ppk2; probable polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E RER_60120 putative tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E RER_00730 rraA; putative ribonuclease regulator K02553 rraA; regulator of ribonuclease activity A E RER_30260 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ E RER_31660 putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] E RER_27790 hrpA; putative ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024