+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Rhizobium johnstonii

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ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C pRL110101 hsdRp11; putative type I restriction-modification system HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C RL1100 hsdRch; putative type I restriction enzyme R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C RL1097 hsdSch; putative type I restriction enzyme specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C pRL110099 hsdSp11; putative type I restriction-modification system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C pRL110098 hsdMp11; putative type I restriction enzyme K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C RL1099 hsdMch1; putative type I restriction enzyme modification methylase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C RL1098 hsdMch2; putative type I restriction enzyme modification methylase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D RL1075 putative modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72] D pRL100027 putative restriction modification methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D RL1932 putative modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D RL2523 putative DNA-damage-inducible protein K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM C HipA-HipB D pRL110273 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D pRL110192 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D pRL110230 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D pRL100321 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D RL3203 putative DNA stabilisation protein K19092 parE1_3_4; toxin ParE1/3/4 D RL3202 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D pRL100012 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D pRL100322 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D RL1611 doc; putative phage death on curing protein K07341 doc; death on curing protein C HigB-HigA C MqsR-MqsA C VapC-VapB D pRL120363 putative PIN domain signalling protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D pRL120364 putative virulence-associated protein homologue K18829 mvpT; antitoxin VapB D pRL100005 conserved hypothetical PIN domain protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-] D pRL100006 conserved hypothetical protein K19687 vapB; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D pRL120076 stbB; putative plasmid stability protein StbB K07062 fitB; toxin FitB [EC:3.1.-.-] D pRL120133 stbB1; putative plasmid stability protein K07062 fitB; toxin FitB [EC:3.1.-.-] D RL1110 putative plasmid-stability like protein K07062 fitB; toxin FitB [EC:3.1.-.-] D RL0887 putative plasmid stability-like protein K07062 fitB; toxin FitB [EC:3.1.-.-] D pRL90095 putative plasmid stability protein K07062 fitB; toxin FitB [EC:3.1.-.-] D RL0432 putative plasmid stability protein K07062 fitB; toxin FitB [EC:3.1.-.-] D pRL120075 stbC; putative plasmid stability protein StbC K21495 fitA; antitoxin FitA D pRL120134 stbC1; putative plasmid stability protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D RL3071 ftsZ2; putative cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RL3298 ftsZ1; putative cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RL1609 parC; putative topoisomerase IV subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RL2515 gyrB2; putative DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RL4184 gltX; putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D RL2385 conserved hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C RL2583 sufS2; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023