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Mitochondrial Biogenesis - Rhizobium johnstonii
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AMitochondrial DNA transcription, translation, and replication factors
B Mitochondrial DNA-encoded proteins
C Mitochondrial respiratory chain complex I
C Mitochondrial respiratory chain complex III
D RL3485 petB; putative cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
C Cytochrome c oxidase
C F-type ATPase
B Mitochondrial transcription and translation factors
C Mitochondrial RNA polymerase
C Mitochondrial transcription factors
C Mitochondrial translation factors
D RL0125 infB; putative translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RL0266 infC; putative translation initiation factor K02520 infC; translation initiation factor IF-3
D RL2222 tsf; putative elongation factor Ts (EF-TS) K02357 tsf; elongation factor Ts
D RL1757 tufB1; putative elongation factor Tu (Ef-Tu) K02358 tuf; elongation factor Tu
D RL1772 tufB2; putative elongation factor Tu (Ef-Tu) K02358 tuf; elongation factor Tu
D RL1771 fus; putative translation elongation factor G, EF-G K02355 fusA; elongation factor G
C RNase MRP
C Mitochondrial ribonuclease P
C Other mitochondrial DNA transcription and translation factors
D RL1636 conserved hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D RL4618 conserved hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RL1512 putative GTP and RNA-binding cell cycle regulator K03595 era; GTPase
D RL2588 tyrS1; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RL3013 tyrS2; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RL2798 leuS2; putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RL4732 leuS; putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RL1605 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RL1058 argS2; putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RL2041 argS; putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D pRL120136 glutamyl-tRNA(Gln) amidotransferase subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RL2076 gatA; putative glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RL0225 putative amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D pRL110427 half-amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RL2082 gatB; putative aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RL2075 gatC; putative glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
B Mitochondrial DNA replication factors
C Mitochondrial DNA polymerase
C Mitochondrial DNA maintenance factors
D RL3945 putative phage DNA primase/helicase K17680 PEO1; twinkle protein [EC:5.6.2.3]
C Other Mitochondrial DNA replication factors
D RL2399 ssb; putative single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
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AMitochondrial protein import machinery
B Endoplasmic reticulum membrane and cytosol
C ER-mitochondria encounter structure (ERMES) complex
C Other ER-memrane and cytosol factors
B Outer membrane
C Transporter outer membrane (TOM) complex
C TOB/SAM complex
D RL2228 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
C Porin
C ERMES complex
C Other outer membrane factor
B Inter membrane space
C Transporter inner membrane (TIM) 9/10 complex
C TIM8/13 complex
C Mitochondrial intermembrane space assembly (MIA) complex
B Inner mambrane
C MICOS complex
C MICOS complex (yeast)
C TIM22 complex
C TIM23 complex
C Mitochondrial calcium uniporter complex
C Other inner membrane factors
B Matrix
C MMC/PAM proteins
D RL0152 dnaK; putative heat shock chaperone protein K04043 dnaK; molecular chaperone DnaK
D RL0382 putative GrpE heat shock protein K03687 GRPE; molecular chaperone GrpE
C Other matrix factors
D pRL120642 groLp12; putative 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RL1412 groLch2; putative 60 kda chaperonin 5 (GroEL protein 5) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RL0883 groLch1; putative 60 kda chaperonin (protein cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RL0884 groSch1; putative 10 kda chaperonin (protein cpn10) K04078 groES; chaperonin GroES
D RL1410 groSch2; putative 10 kda chaperonin 5 (GroES protein 5) K04078 groES; chaperonin GroES
D pRL120643 groSp12; putative 10 kDa chaperonin K04078 groES; chaperonin GroES
D RL0151 dnaJ; putative chaperone protein K03686 dnaJ; molecular chaperone DnaJ
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AMitochondrial quality control factors
B Regulator of mitochondrial biogenesis
C Ubiquitas transcription factors
D RL1771 fus; putative translation elongation factor G, EF-G K02355 fusA; elongation factor G
C Nuclear respiratory factors
C Coactivators
C Proteins involved in Fe-S cluster biogenesis
D RL2583 sufS2; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RL0152 dnaK; putative heat shock chaperone protein K04043 dnaK; molecular chaperone DnaK
D RL2615 putative glutaredoxin K07390 grxD; monothiol glutaredoxin
C Other regulator of mitochondrial biogenesis
B Mitochondrial respiratory chain complex assembly factors
C Complex-I assembly factors
D RL0920 putative ATP-binding mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C Complex-II assembly factors
C Complex-III assembly factors
D RL1636 conserved hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
C Complex-IV assembly factors
D RL1023 ctaB; putative protoheme IX farnesyltransferase (heme o synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D RL1025 ctaG; putative cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RL1666 cox15; putative transmembrane heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D RL0453 oxaA; putative transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D pRL110038 putative surfeit locus protein 1 K14998 SURF1; surfeit locus 1 family protein
D RL1029 putative transmembrane cytochrome oxidase biogenesis protein K14998 SURF1; surfeit locus 1 family protein
D RL3288 putative Sco copper chaperone family protein K07152 SCO1; protein SCO1
C Complex-V assembly factors
B Mitochondrial dynamics
C Fission and Fusion factors
C Actin cytoskeleton organization
C Mitochondrial movement
C Retention of mitochondria
C Morphogenesis factors
B Mitophagy factors
C Autophagy-related proteins
C Parkin-dependent mechanism factors
C Parkin-independent mechanism factors
C Other mitophagy factors
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 14, 2024