+E Replication protein KO
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DNA Replication Proteins - Rhizobium johnstonii
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D RL2672 rnhA2; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RL1032 rnhA1; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D RL1932 putative modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D RL1691 hupA; putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D pRL70019 hupA2; putative DNA-binding protein Hu-alpha K03530 hupB; DNA-binding protein HU-beta
D RL1640 ihfA; putative integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D RL0417 ihfB; putative integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RL0375 dnaA; putative chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D RL1551 dnaC; putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RL3408 dnaG; putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D pRL70003 repCp7a; putative replication protein K18996 repC; replication initiation protein RepC
D pRL100003 repCp10; putative RepC replication protein K18996 repC; replication initiation protein RepC
D pRL110003 repCp11; putative replication protein C K18996 repC; replication initiation protein RepC
D pRL120003 repCp12; putative replication protein C K18996 repC; replication initiation protein RepC
D pRL70039 repCp7b; putative replication protein C K18996 repC; replication initiation protein RepC
D pRL70094 repCp7c; putative replication protein K18996 repC; replication initiation protein RepC
D pRL80003 repCp8; replication RepC protein K18996 repC; replication initiation protein RepC
D pRL90003 repCp9; putative replication protein RepC K18996 repC; replication initiation protein RepC
D RL2399 ssb; putative single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E RL4697 dnaE1; putative DNA polymerase I alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E RL1723 dnaE3; putative DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E RL0334 dnaN; putative DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E RL1572 putative DNA polymerase III subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E RL4734 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E RL2475 holB; putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E RL3291 putative DNA polymerase/exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E RL0005 putative DNA polymerase subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E pRL110533 putative exonuclease/polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E RL0134 dnaX; putative DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E RL2672 rnhA2; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E RL1032 rnhA1; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E RL0930 putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E RL0160 polA; putative DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E RL3293 ligA; putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E RL2672 rnhA2; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E RL1032 rnhA1; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E RL0930 putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C RL2401 gyrA; putative DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C RL0012 gyrB1; putative DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C RL1609 parC; putative topoisomerase IV subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C RL2515 gyrB2; putative DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C RL1735 topA; putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C pRL110305 putative topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022