+D GENES KO
#
KEGG Orthology (KO) - Rothia terrae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rter00010]
D IDM49_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IDM49_03000 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IDM49_09015 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IDM49_01310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IDM49_06700 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IDM49_01050 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_06710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_06705 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IDM49_09790 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IDM49_09125 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IDM49_06880 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IDM49_05200 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IDM49_07380 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_06470 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D IDM49_09480 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IDM49_07780 aldehyde dehydrogenase family protein K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IDM49_11075 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_07450 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D IDM49_09900 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D IDM49_01400 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IDM49_03075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:rter00020]
D IDM49_03975 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D IDM49_07210 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D IDM49_03875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IDM49_04505 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_02200 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IDM49_02195 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IDM49_09185 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_10625 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_09180 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_10620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_09195 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_10630 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_09190 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IDM49_09030 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IDM49_04820 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D IDM49_07645 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IDM49_09900 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D IDM49_05200 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IDM49_07380 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rter00030]
D IDM49_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IDM49_06680 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IDM49_06690 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D IDM49_05245 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IDM49_07105 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IDM49_06670 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IDM49_06675 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IDM49_05345 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IDM49_09305 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_08900 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IDM49_00455 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D IDM49_01310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IDM49_09015 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IDM49_03000 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rter00040]
D IDM49_03620 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IDM49_07105 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IDM49_01750 sugar kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:rter00051]
D IDM49_01060 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IDM49_09855 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IDM49_08710 deoC; deoxyribose-phosphate aldolase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IDM49_09860 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IDM49_09200 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IDM49_03000 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IDM49_09015 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IDM49_03445 hypothetical protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D IDM49_02005 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D IDM49_01310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IDM49_06700 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IDM49_05345 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IDM49_02010 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IDM49_00375 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D IDM49_00370 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D IDM49_00365 manZ; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:rter00052]
D IDM49_11075 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IDM49_00290 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IDM49_00780 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IDM49_11105 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IDM49_00775 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IDM49_03980 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IDM49_03620 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_00765 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D IDM49_04345 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IDM49_03000 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IDM49_10710 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_03055 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_03060 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_03065 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_10580 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D IDM49_03570 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D IDM49_03575 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D IDM49_07910 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D IDM49_07905 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:rter00500]
D IDM49_03070 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D IDM49_10710 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_03055 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_03060 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_03065 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IDM49_10580 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D IDM49_08725 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D IDM49_03620 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IDM49_01400 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IDM49_03570 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D IDM49_03575 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D IDM49_03075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IDM49_03585 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D IDM49_03580 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D IDM49_10460 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IDM49_01060 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rter00520]
D IDM49_03075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IDM49_01060 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IDM49_03460 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IDM49_03435 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D IDM49_08905 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IDM49_04955 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IDM49_02930 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IDM49_08865 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D IDM49_07450 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_03620 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IDM49_00290 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IDM49_00780 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IDM49_11105 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IDM49_00775 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IDM49_03980 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IDM49_04345 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IDM49_00375 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D IDM49_00370 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D IDM49_00365 manZ; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D IDM49_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IDM49_09855 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IDM49_08710 deoC; deoxyribose-phosphate aldolase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IDM49_09860 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IDM49_09200 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:rter00620]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IDM49_05200 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IDM49_07380 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_08405 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D IDM49_09480 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IDM49_00815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IDM49_00820 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IDM49_06880 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IDM49_08690 biotin/lipoyl-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_10795 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_01840 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D IDM49_06470 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D IDM49_09035 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D IDM49_02425 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D IDM49_07645 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IDM49_04820 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D IDM49_09030 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IDM49_09900 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D IDM49_06285 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rter00630]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IDM49_03975 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D IDM49_07210 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D IDM49_08690 biotin/lipoyl-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_10795 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_08660 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D IDM49_02830 catalase K03781 katE; catalase [EC:1.11.1.6]
D IDM49_06740 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D IDM49_07415 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07430 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_09235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IDM49_03170 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IDM49_03175 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_07670 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IDM49_11190 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IDM49_04505 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:rter00640]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IDM49_00815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IDM49_00820 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IDM49_01910 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IDM49_01915 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IDM49_01920 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_08405 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_08690 biotin/lipoyl-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_10795 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_08660 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D IDM49_02195 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IDM49_02200 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IDM49_06470 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:rter00650]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_09185 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_10625 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_09180 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_10620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_09195 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_10630 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_09190 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IDM49_10510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_01265 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_07110 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_08405 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D IDM49_00410 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04860 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04865 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IDM49_07420 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D IDM49_05850 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:rter00660]
D IDM49_00410 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04860 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04865 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IDM49_07420 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D IDM49_02195 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IDM49_02200 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IDM49_04945 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IDM49_04950 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IDM49_04895 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D IDM49_06700 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rter00190]
D IDM49_09105 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D IDM49_09185 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_10625 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_09180 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_10620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_09195 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_10630 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_09190 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IDM49_06340 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D IDM49_06335 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D IDM49_06345 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D IDM49_06665 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D IDM49_06330 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D IDM49_06350 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D IDM49_06325 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D IDM49_06320 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D IDM49_06645 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D IDM49_07335 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IDM49_07330 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IDM49_04665 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D IDM49_04675 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D IDM49_04670 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D IDM49_04660 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D IDM49_04680 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D IDM49_04645 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IDM49_04655 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D IDM49_04650 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D IDM49_11090 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D IDM49_02965 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IDM49_03430 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rter00710]
D IDM49_06705 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IDM49_01050 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_06710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_01310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IDM49_09015 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IDM49_06670 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IDM49_05345 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IDM49_06700 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IDM49_07105 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IDM49_06675 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rter00720]
D IDM49_07645 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IDM49_09030 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IDM49_09185 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_10625 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IDM49_09180 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_10620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IDM49_09195 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_10630 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IDM49_09190 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IDM49_02200 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IDM49_02195 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IDM49_03875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IDM49_07210 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D IDM49_06760 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IDM49_09230 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IDM49_00820 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IDM49_00815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rter00680]
D IDM49_02230 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IDM49_11535 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IDM49_09235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IDM49_09125 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IDM49_01310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IDM49_09015 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IDM49_03000 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IDM49_00815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IDM49_00820 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IDM49_09790 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IDM49_04875 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IDM49_02150 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IDM49_06510 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rter00910]
D IDM49_03165 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D IDM49_03145 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03150 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03160 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_05435 FAD-dependent oxidoreductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D IDM49_05440 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D IDM49_10655 multicopper oxidase domain-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D IDM49_05940 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D IDM49_00515 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IDM49_07415 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07430 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_06895 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IDM49_06890 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IDM49_08490 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D IDM49_09025 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rter00920]
D IDM49_00340 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D IDM49_01445 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D IDM49_05390 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IDM49_05385 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IDM49_05380 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D IDM49_05400 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D IDM49_01730 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IDM49_05250 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IDM49_05255 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IDM49_08585 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D IDM49_09800 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rter00061]
D IDM49_08690 biotin/lipoyl-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_10795 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_05185 acyl carrier protein K02078 acpP; acyl carrier protein
D IDM49_05195 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IDM49_05190 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IDM49_05180 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IDM49_11110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06515 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_07990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_01955 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_07625 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rter00071]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_07990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_01955 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_07625 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_12015 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rter00561]
D IDM49_11190 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IDM49_09480 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IDM49_07705 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IDM49_07940 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D IDM49_06735 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IDM49_07615 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IDM49_01380 NAD(+)/NADH kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IDM49_08500 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:rter00564]
D IDM49_04965 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D IDM49_07690 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D IDM49_06735 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IDM49_07615 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IDM49_08780 adenylyltransferase/cytidyltransferase family protein K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D IDM49_01380 NAD(+)/NADH kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IDM49_10345 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IDM49_10705 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IDM49_01075 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IDM49_08445 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D IDM49_11205 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D IDM49_08235 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D IDM49_08180 hypothetical protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D IDM49_10310 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D IDM49_00765 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D IDM49_05325 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rter00230]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_08900 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IDM49_02325 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IDM49_02360 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D IDM49_09255 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IDM49_10225 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D IDM49_10215 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D IDM49_10220 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IDM49_02320 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D IDM49_08990 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D IDM49_08995 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D IDM49_02365 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D IDM49_01890 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IDM49_09250 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IDM49_07975 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D IDM49_10955 S-layer homology domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IDM49_08705 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IDM49_08030 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IDM49_07515 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IDM49_09705 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D IDM49_01495 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D IDM49_03540 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IDM49_03545 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IDM49_05480 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IDM49_04770 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D IDM49_09520 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D IDM49_03560 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IDM49_07890 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D IDM49_06150 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D IDM49_05875 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IDM49_01245 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IDM49_05885 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IDM49_09825 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D IDM49_08525 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D IDM49_06010 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IDM49_10530 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D IDM49_08640 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D IDM49_10550 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IDM49_09135 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D IDM49_00565 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D IDM49_03370 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IDM49_05960 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D IDM49_05390 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IDM49_05385 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IDM49_01095 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D IDM49_01090 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D IDM49_01085 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D IDM49_08490 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:rter00240]
D IDM49_06135 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IDM49_06130 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IDM49_06115 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IDM49_06120 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D IDM49_06300 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D IDM49_01290 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D IDM49_06140 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D IDM49_08455 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D IDM49_05480 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IDM49_08685 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D IDM49_07830 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D IDM49_04220 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D IDM49_10955 S-layer homology domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IDM49_01710 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D IDM49_06110 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D IDM49_00565 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D IDM49_09150 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D IDM49_09825 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D IDM49_09530 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D IDM49_05875 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IDM49_01245 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IDM49_05885 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IDM49_09805 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D IDM49_07255 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D IDM49_09145 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D IDM49_03835 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D IDM49_02955 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IDM49_09920 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rter00250]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_01660 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D IDM49_03660 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IDM49_01335 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D IDM49_07985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IDM49_07980 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IDM49_10550 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IDM49_01890 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IDM49_06115 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IDM49_10510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_01265 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_07110 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_06895 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IDM49_06890 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IDM49_00515 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IDM49_07675 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IDM49_07415 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07430 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_06135 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IDM49_06130 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IDM49_03745 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IDM49_10220 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IDM49_03460 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IDM49_02325 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rter00260]
D IDM49_10180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IDM49_02945 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IDM49_04580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IDM49_04590 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D IDM49_04585 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IDM49_09235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IDM49_11190 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IDM49_09790 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IDM49_04875 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IDM49_02150 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IDM49_06510 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D IDM49_03170 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IDM49_03175 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_07670 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IDM49_10670 GMC family oxidoreductase N-terminal domain-containing protein K17755 codA; choline oxidase [EC:1.1.3.17]
D IDM49_10675 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IDM49_02190 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D IDM49_03180 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IDM49_04210 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IDM49_09080 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IDM49_06970 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IDM49_06975 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rter00270]
D IDM49_05250 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IDM49_05255 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IDM49_10365 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IDM49_10425 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IDM49_10435 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IDM49_06165 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IDM49_08300 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D IDM49_07515 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IDM49_00655 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IDM49_08295 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IDM49_10180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IDM49_02945 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IDM49_04580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IDM49_08585 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D IDM49_09800 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IDM49_08590 PLP-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D IDM49_04900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_01730 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IDM49_06470 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D IDM49_07340 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D IDM49_03180 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IDM49_04210 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IDM49_04875 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IDM49_02150 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rter00280]
D IDM49_04900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IDM49_01910 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IDM49_01915 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IDM49_01920 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_08690 biotin/lipoyl-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_10795 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D IDM49_08660 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rter00290]
D IDM49_09080 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IDM49_04945 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IDM49_04950 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IDM49_04895 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D IDM49_00410 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04860 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04865 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IDM49_04870 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IDM49_10415 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IDM49_04900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IDM49_03660 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IDM49_06285 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rter00300]
D IDM49_04580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IDM49_10180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IDM49_02945 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IDM49_08250 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IDM49_08260 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D IDM49_03985 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D IDM49_08005 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IDM49_05010 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D IDM49_03990 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IDM49_08185 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IDM49_01440 FAD/NAD(P)-binding protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IDM49_04575 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IDM49_07560 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IDM49_07555 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rter00310]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_10510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_01265 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_07110 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:rter00220]
D IDM49_08485 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D IDM49_07985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IDM49_07980 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IDM49_01095 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D IDM49_01090 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D IDM49_01085 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D IDM49_08480 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D IDM49_03745 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IDM49_10220 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IDM49_07415 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07430 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_06135 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IDM49_06130 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IDM49_08490 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D IDM49_00515 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_03660 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IDM49_01580 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D IDM49_08015 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D IDM49_08010 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D IDM49_08020 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D IDM49_08005 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IDM49_00445 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rter00330]
D IDM49_07915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IDM49_02605 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D IDM49_07675 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IDM49_09350 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D IDM49_05510 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IDM49_05515 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rter00340]
D IDM49_07050 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D IDM49_07055 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D IDM49_07000 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D IDM49_08115 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D IDM49_08125 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D IDM49_07045 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D IDM49_08130 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D IDM49_08135 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_01905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_04470 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D IDM49_07460 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D IDM49_07750 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IDM49_07765 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D IDM49_07760 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D IDM49_07755 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D IDM49_07780 aldehyde dehydrogenase family protein K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5]
C 00350 Tyrosine metabolism [PATH:rter00350]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_08135 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_01905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_07780 aldehyde dehydrogenase family protein K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5]
D IDM49_10510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_01265 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_07110 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_05910 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:rter00360]
D IDM49_07780 aldehyde dehydrogenase family protein K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_08135 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_01905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_07915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IDM49_12015 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:rter00380]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IDM49_07915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IDM49_02830 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rter00400]
D IDM49_07610 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IDM49_02475 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D IDM49_00510 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D IDM49_06090 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D IDM49_04480 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D IDM49_06085 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D IDM49_06995 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IDM49_06355 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D IDM49_08115 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D IDM49_06980 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D IDM49_06970 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IDM49_06975 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D IDM49_04255 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D IDM49_07835 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D IDM49_01370 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_08135 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_01905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rter00410]
D IDM49_07780 aldehyde dehydrogenase family protein K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5]
D IDM49_01545 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00430 Taurine and hypotaurine metabolism [PATH:rter00430]
D IDM49_01335 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D IDM49_00515 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IDM49_00820 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IDM49_00815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rter00450]
D IDM49_09800 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IDM49_10365 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IDM49_10425 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IDM49_10435 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IDM49_08790 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D IDM49_00035 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IDM49_05390 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IDM49_05385 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IDM49_04880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rter00460]
D IDM49_01660 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D IDM49_09235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rter00470]
D IDM49_03490 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IDM49_04970 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IDM49_03745 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IDM49_10220 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IDM49_04755 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IDM49_07545 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IDM49_08185 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IDM49_01440 FAD/NAD(P)-binding protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IDM49_04575 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rter00480]
D IDM49_10785 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D IDM49_03515 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D IDM49_07370 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IDM49_05340 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IDM49_06480 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IDM49_03875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IDM49_05245 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IDM49_06680 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:rter00515]
D IDM49_08960 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:rter00514]
D IDM49_08960 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rter00511]
D IDM49_00765 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rter00541]
D IDM49_03620 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IDM49_03980 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IDM49_04345 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IDM49_08815 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IDM49_08810 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D IDM49_08805 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D IDM49_09855 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IDM49_08710 deoC; deoxyribose-phosphate aldolase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IDM49_09860 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IDM49_09200 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IDM49_08905 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rter00550]
D IDM49_04955 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IDM49_02930 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IDM49_07530 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IDM49_07545 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IDM49_07560 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IDM49_04970 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IDM49_07555 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IDM49_06295 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IDM49_06455 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IDM49_07550 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IDM49_07535 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IDM49_07565 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IDM49_11010 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D IDM49_01480 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IDM49_05970 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D IDM49_05975 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:rter00552]
D IDM49_06455 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IDM49_09000 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D IDM49_08500 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rter00543]
D IDM49_05250 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rter00730]
D IDM49_03775 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D IDM49_04245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IDM49_07195 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IDM49_03765 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D IDM49_03770 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D IDM49_04985 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D IDM49_04475 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IDM49_03370 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rter00740]
D IDM49_07065 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IDM49_07075 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D IDM49_09095 HAD family phosphatase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D IDM49_07070 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D IDM49_07060 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D IDM49_08310 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D IDM49_00340 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D IDM49_01445 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D IDM49_03765 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:rter00750]
D IDM49_05375 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D IDM49_02150 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IDM49_04585 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IDM49_00685 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D IDM49_00680 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rter00760]
D IDM49_04740 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D IDM49_08705 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IDM49_08030 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IDM49_10050 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D IDM49_10955 S-layer homology domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IDM49_05525 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D IDM49_04170 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D IDM49_10575 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D IDM49_08230 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D IDM49_04735 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D IDM49_07925 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D IDM49_10510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_01265 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IDM49_07110 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rter00770]
D IDM49_00410 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04860 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IDM49_04865 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IDM49_04870 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IDM49_10415 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IDM49_07435 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D IDM49_01545 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D IDM49_03455 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D IDM49_06160 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D IDM49_05015 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D IDM49_06825 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D IDM49_03465 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D IDM49_02110 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D IDM49_04900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:rter00780]
D IDM49_05180 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IDM49_11110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06515 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_07095 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D IDM49_07090 AAA family ATPase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D IDM49_00300 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D IDM49_08650 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rter00785]
D IDM49_07395 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D IDM49_07400 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D IDM49_05895 lipoate--protein ligase family protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D IDM49_03795 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_05200 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IDM49_07380 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IDM49_04505 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D IDM49_01910 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IDM49_01915 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IDM49_01920 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IDM49_03170 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IDM49_03175 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IDM49_07670 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rter00790]
D IDM49_01505 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D IDM49_01515 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D IDM49_01520 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D IDM49_01510 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D IDM49_02950 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IDM49_05460 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D IDM49_07065 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IDM49_11025 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D IDM49_09475 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D IDM49_03105 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IDM49_03125 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IDM49_03135 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D IDM49_03090 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D IDM49_03120 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:rter00670]
D IDM49_02950 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IDM49_06760 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IDM49_09230 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IDM49_09235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IDM49_09255 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IDM49_09250 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IDM49_07120 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IDM49_03175 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IDM49_02955 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IDM49_03615 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rter00860]
D IDM49_02735 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04910 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04090 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D IDM49_04130 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IDM49_04125 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IDM49_04115 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D IDM49_11160 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D IDM49_04120 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D IDM49_04095 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D IDM49_04100 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D IDM49_04110 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D IDM49_05430 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D IDM49_05450 hypothetical protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D IDM49_06665 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D IDM49_06645 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D IDM49_11655 multicopper oxidase family protein K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
D IDM49_11870 multicopper oxidase family protein K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rter00130]
D IDM49_02765 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D IDM49_02105 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D IDM49_02755 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D IDM49_02750 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D IDM49_02700 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D IDM49_02720 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D IDM49_02695 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D IDM49_10730 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rter00900]
D IDM49_07195 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IDM49_08420 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D IDM49_09750 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D IDM49_08935 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D IDM49_09745 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D IDM49_08390 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D IDM49_03680 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D IDM49_07595 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IDM49_09050 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D IDM49_06295 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rter00907]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D IDM49_06670 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rter00523]
D IDM49_08815 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IDM49_08810 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D IDM49_08805 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D IDM49_08880 NAD(P)-dependent oxidoreductase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:rter01053]
D IDM49_02105 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D IDM49_02100 SDR family oxidoreductase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D IDM49_03275 AMP-binding protein K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D IDM49_03310 amino acid adenylation domain-containing protein K04780 dhbF; glyine---[glycyl-carrier protein] ligase [EC:6.2.1.66]
C 01055 Biosynthesis of vancomycin group antibiotics
D IDM49_08810 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:rter00332]
D IDM49_05510 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IDM49_05515 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rter00261]
D IDM49_05390 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IDM49_05385 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IDM49_10180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IDM49_02945 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IDM49_08250 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IDM49_08260 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rter00521]
D IDM49_01260 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IDM49_08815 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IDM49_08810 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D IDM49_08805 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:rter00525]
D IDM49_08815 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IDM49_08810 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rter00401]
D IDM49_07835 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_08135 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_01905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:rter00405]
D IDM49_10735 isochorismatase family protein K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D IDM49_02300 FAD-dependent monooxygenase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D IDM49_06995 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D IDM49_05195 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IDM49_11110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06515 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:rter00998]
D IDM49_05185 acyl carrier protein K02078 acpP; acyl carrier protein
D IDM49_01435 pyridoxal-phosphate dependent enzyme K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites
D IDM49_06165 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D IDM49_01435 pyridoxal-phosphate dependent enzyme K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rter00362]
D IDM49_03890 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D IDM49_07820 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D IDM49_12015 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D IDM49_09910 (2Fe-2S)-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00627 Aminobenzoate degradation [PATH:rter00627]
D IDM49_07915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IDM49_01840 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D IDM49_02230 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IDM49_11535 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D IDM49_03890 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:rter00622]
D IDM49_03890 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation [PATH:rter00633]
D IDM49_02235 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:rter00643]
D IDM49_07915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IDM49_03890 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D IDM49_01095 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D IDM49_01090 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D IDM49_01085 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D IDM49_00990 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rter03020]
D IDM49_03185 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IDM49_03190 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IDM49_03405 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IDM49_06155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rter03010]
D IDM49_06835 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D IDM49_08465 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D IDM49_03255 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D IDM49_06050 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D IDM49_03350 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D IDM49_11240 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D IDM49_03200 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D IDM49_03335 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D IDM49_03425 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D IDM49_03220 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D IDM49_03400 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D IDM49_03195 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D IDM49_03395 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D IDM49_09630 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D IDM49_08280 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D IDM49_05110 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D IDM49_03270 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D IDM49_11230 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D IDM49_03245 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D IDM49_06215 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D IDM49_03040 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D IDM49_03240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D IDM49_03225 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D IDM49_03230 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D IDM49_03330 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D IDM49_03340 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D IDM49_03050 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D IDM49_11225 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D IDM49_03045 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D IDM49_03035 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D IDM49_03420 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D IDM49_03320 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D IDM49_03360 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D IDM49_03260 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D IDM49_03410 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D IDM49_03345 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D IDM49_05130 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D IDM49_08090 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D IDM49_05495 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D IDM49_03250 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D IDM49_03235 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D IDM49_03325 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D IDM49_08800 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D IDM49_05500 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D IDM49_09640 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D IDM49_03265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D IDM49_03355 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D IDM49_06495 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IDM49_05025 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D IDM49_09635 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D IDM49_00105 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D IDM49_08095 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D IDM49_10005 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IDM49_03390 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IDM49_07960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_11130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_09725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_07955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_09720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_11125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_00155 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_00190 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_07950 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_09715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rter00970]
D IDM49_00150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IDM49_05540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IDM49_00185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IDM49_09905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_05300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_02175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_04565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_08515 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IDM49_00960 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IDM49_12060 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IDM49_07135 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IDM49_04915 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IDM49_08910 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IDM49_00955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IDM49_04920 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IDM49_04925 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IDM49_06950 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_07140 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_07150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_09535 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_05285 tRNA-His K14226 tRNA-His; tRNA His
D IDM49_00145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IDM49_04830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_09100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_06475 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_06955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_06870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_10980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_01645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IDM49_04845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IDM49_04850 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IDM49_02890 tRNA-Met K14230 tRNA-Met; tRNA Met
D IDM49_04200 tRNA-Met K14230 tRNA-Met; tRNA Met
D IDM49_08495 tRNA-Ile K14230 tRNA-Met; tRNA Met
D IDM49_00965 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IDM49_07815 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IDM49_02420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IDM49_06945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IDM49_10140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_01755 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_01745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_01705 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_09685 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_01810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_02885 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_02895 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_03020 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IDM49_02860 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IDM49_05230 tRNA-Val K14237 tRNA-Val; tRNA Val
D IDM49_05235 tRNA-Val K14237 tRNA-Val; tRNA Val
D IDM49_07145 tRNA-Val K14237 tRNA-Val; tRNA Val
D IDM49_02735 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04910 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_08615 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IDM49_08610 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D IDM49_08620 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D IDM49_06065 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IDM49_06030 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IDM49_08565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IDM49_05920 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IDM49_01385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IDM49_09735 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IDM49_04880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IDM49_07120 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IDM49_05360 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IDM49_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IDM49_05455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IDM49_10910 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IDM49_01550 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IDM49_04570 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IDM49_08365 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IDM49_06025 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IDM49_08045 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IDM49_08040 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IDM49_07965 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IDM49_09215 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rter03060]
D IDM49_03365 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IDM49_03025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IDM49_06695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IDM49_06000 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IDM49_06005 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IDM49_00090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IDM49_04290 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IDM49_05095 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IDM49_10145 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D IDM49_05065 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IDM49_06390 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D IDM49_04030 twin-arginine translocase TatA/TatE family subunit K03117 tatB; sec-independent protein translocase protein TatB
D IDM49_06385 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D IDM49_05135 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IDM49_05140 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IDM49_07490 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rter04122]
D IDM49_04245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IDM49_01730 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IDM49_04250 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IDM49_03135 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D IDM49_03105 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IDM49_03100 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D IDM49_03140 ThiF family adenylyltransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D IDM49_03125 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
D IDM49_06430 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:rter03018]
D IDM49_05490 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D IDM49_09125 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IDM49_08275 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IDM49_02880 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IDM49_01690 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IDM49_04595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IDM49_08245 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D IDM49_09430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IDM49_02055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_03530 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_02965 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IDM49_03430 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D IDM49_00015 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rter03030]
D IDM49_04145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IDM49_07480 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IDM49_10150 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IDM49_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IDM49_06210 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IDM49_00115 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IDM49_11185 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IDM49_08520 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IDM49_11235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_02115 DUF4440 domain-containing protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IDM49_05145 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IDM49_08630 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rter03410]
D IDM49_02485 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IDM49_02040 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IDM49_01585 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IDM49_05035 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IDM49_09930 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IDM49_05350 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IDM49_05310 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IDM49_07735 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IDM49_07205 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D IDM49_00970 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IDM49_05090 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IDM49_08630 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rter03420]
D IDM49_08720 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IDM49_02225 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IDM49_06745 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IDM49_06815 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D IDM49_06730 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D IDM49_02185 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_04160 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_04175 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_08630 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rter03430]
D IDM49_00660 restriction endonuclease K03573 mutH; DNA mismatch repair protein MutH
D IDM49_02185 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_04160 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_04175 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_03670 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IDM49_03665 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IDM49_11235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_07480 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IDM49_00115 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IDM49_10150 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IDM49_06210 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IDM49_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IDM49_04145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IDM49_08630 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IDM49_05420 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rter03440]
D IDM49_11235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_00120 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D IDM49_06290 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IDM49_10155 recR; recombination protein RecR K06187 recR; recombination protein RecR
D IDM49_08215 recA; recombinase RecA K03553 recA; recombination protein RecA
D IDM49_05990 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IDM49_05995 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D IDM49_05985 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IDM49_04995 DEAD/DEAH box helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IDM49_07480 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IDM49_00115 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IDM49_10150 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IDM49_06210 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IDM49_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IDM49_04145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IDM49_06170 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rter03250]
D IDM49_00245 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rter02010]
D IDM49_03110 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D IDM49_03115 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D IDM49_10485 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IDM49_03655 hypothetical protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IDM49_10490 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IDM49_10495 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IDM49_10500 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D IDM49_00755 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IDM49_09170 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D IDM49_09160 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D IDM49_09155 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D IDM49_09165 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IDM49_01610 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IDM49_01615 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D IDM49_01620 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D IDM49_01625 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IDM49_04005 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D IDM49_04000 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D IDM49_03995 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D IDM49_04010 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D IDM49_10360 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IDM49_10355 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D IDM49_10350 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D IDM49_01960 methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D IDM49_01970 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D IDM49_01965 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D IDM49_10255 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D IDM49_10260 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D IDM49_10265 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D IDM49_03305 fepB; Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D IDM49_10515 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D IDM49_09670 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D IDM49_03290 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein
D IDM49_09665 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D IDM49_10520 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D IDM49_03295 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D IDM49_09660 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D IDM49_10525 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D IDM49_03300 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IDM49_09655 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IDM49_01410 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D IDM49_01420 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D IDM49_01415 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D IDM49_06550 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D IDM49_06560 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D IDM49_06555 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D IDM49_09490 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D IDM49_09695 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D IDM49_01790 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D IDM49_01795 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D IDM49_09895 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D IDM49_06570 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IDM49_06575 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IDM49_07325 cydC; thiol reductant ABC exporter subunit CydC K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
C 02060 Phosphotransferase system (PTS) [PATH:rter02060]
D IDM49_02015 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D IDM49_02020 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IDM49_03075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IDM49_03070 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D IDM49_10235 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_10465 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_01395 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_07775 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_03585 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D IDM49_00375 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D IDM49_00370 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D IDM49_00365 manZ; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D IDM49_07910 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D IDM49_07905 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D IDM49_02010 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IDM49_02005 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rter03070]
D IDM49_06000 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IDM49_06005 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IDM49_03025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IDM49_06695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IDM49_03365 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IDM49_00090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IDM49_04290 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IDM49_05065 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IDM49_05095 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IDM49_06390 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D IDM49_04030 twin-arginine translocase TatA/TatE family subunit K03117 tatB; sec-independent protein translocase protein TatB
D IDM49_06385 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rter02020]
D IDM49_09770 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D IDM49_09765 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D IDM49_01610 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IDM49_06645 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D IDM49_08725 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D IDM49_04235 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D IDM49_04270 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D IDM49_04265 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D IDM49_00110 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IDM49_01410 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D IDM49_01415 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D IDM49_01420 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D IDM49_01800 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D IDM49_01935 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D IDM49_03145 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03150 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03160 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03155 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D IDM49_02065 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D IDM49_03695 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IDM49_03690 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D IDM49_02500 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IDM49_04365 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IDM49_02505 hypothetical protein K12510 tadB; tight adherence protein B
D IDM49_04410 type II secretion system F family protein K12510 tadB; tight adherence protein B
D IDM49_04415 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IDM49_05075 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D IDM49_07415 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07430 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07865 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D IDM49_02465 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IDM49_03745 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IDM49_07335 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IDM49_07330 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IDM49_09460 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rter02024]
D IDM49_08295 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IDM49_06995 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IDM49_07610 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IDM49_10735 isochorismatase family protein K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D IDM49_07990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_01955 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_07625 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_02465 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IDM49_07065 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IDM49_07075 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D IDM49_03790 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D IDM49_02805 TIGR04028 family ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IDM49_04825 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IDM49_02800 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IDM49_02795 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IDM49_10275 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IDM49_02790 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IDM49_00090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IDM49_10025 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IDM49_03025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IDM49_06695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IDM49_03365 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IDM49_04290 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IDM49_05065 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IDM49_05095 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:rter02040]
D IDM49_10360 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IDM49_07355 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D IDM49_09125 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D IDM49_07565 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rter01502]
D IDM49_04970 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IDM49_03490 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IDM49_07555 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IDM49_07550 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IDM49_07535 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D IDM49_00245 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rter01000]
C 01001 Protein kinases [BR:rter01001]
D IDM49_11015 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IDM49_11020 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IDM49_07605 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IDM49_08820 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D IDM49_09770 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D IDM49_04270 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D IDM49_00395 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IDM49_02125 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IDM49_03695 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IDM49_04325 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rter01009]
D IDM49_08635 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D IDM49_11000 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D IDM49_06510 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rter01002]
D IDM49_07490 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D IDM49_09045 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IDM49_03925 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D IDM49_03560 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IDM49_02160 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IDM49_02325 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IDM49_06895 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IDM49_03460 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IDM49_10845 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D IDM49_02220 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D IDM49_11530 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D IDM49_11035 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D IDM49_10600 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D IDM49_05340 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IDM49_06480 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IDM49_07370 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IDM49_03990 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IDM49_09565 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D IDM49_03375 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IDM49_07445 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IDM49_04055 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D IDM49_01500 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IDM49_02845 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D IDM49_04235 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D IDM49_10025 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IDM49_11180 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D IDM49_08595 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D IDM49_01480 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IDM49_06910 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D IDM49_06915 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D IDM49_04190 PDZ domain-containing protein K07177 K07177; Lon-like protease
D IDM49_08145 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D IDM49_00060 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IDM49_06655 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IDM49_05135 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IDM49_05140 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:rter01003]
D IDM49_06370 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D IDM49_08960 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D IDM49_08500 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D IDM49_00895 pelF; GT4 family glycosyltransferase PelF K21011 pelF; polysaccharide biosynthesis protein PelF
D IDM49_08725 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D IDM49_10640 DUF2029 domain-containing protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D IDM49_04350 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rter01011]
D IDM49_04955 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IDM49_02930 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IDM49_07530 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IDM49_07545 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IDM49_07560 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IDM49_04970 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IDM49_03490 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IDM49_04755 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IDM49_07550 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IDM49_07535 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IDM49_06455 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IDM49_00025 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D IDM49_07565 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IDM49_11010 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D IDM49_01480 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IDM49_02160 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IDM49_11035 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D IDM49_06075 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:rter01004]
D IDM49_05195 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IDM49_05190 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IDM49_05180 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IDM49_11110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06515 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_06520 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IDM49_05325 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D IDM49_02480 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IDM49_07990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_01955 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_07625 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_06735 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IDM49_07615 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rter01008]
D IDM49_03280 acyl carrier protein K14669 whiEV; minimal PKS acyl carrier protein
D IDM49_03275 AMP-binding protein K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D IDM49_03310 amino acid adenylation domain-containing protein K04780 dhbF; glyine---[glycyl-carrier protein] ligase [EC:6.2.1.66]
C 01006 Prenyltransferases [BR:rter01006]
D IDM49_07595 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IDM49_09050 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D IDM49_06295 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IDM49_08190 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IDM49_02695 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D IDM49_06665 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rter01007]
D IDM49_02735 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04910 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_07965 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IDM49_09215 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IDM49_09735 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IDM49_04570 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IDM49_04880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IDM49_05455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IDM49_05360 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IDM49_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IDM49_10910 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IDM49_01550 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IDM49_06030 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IDM49_06025 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IDM49_08565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IDM49_01385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IDM49_08365 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IDM49_05920 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IDM49_06065 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IDM49_08045 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IDM49_08040 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IDM49_03015 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IDM49_03660 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IDM49_05010 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D IDM49_08135 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_01905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IDM49_07095 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D IDM49_08005 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IDM49_04130 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IDM49_04900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IDM49_02150 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:rter00199]
D IDM49_07785 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:rter00194]
D IDM49_04680 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D IDM49_04675 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D IDM49_04670 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D IDM49_04665 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D IDM49_04660 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D IDM49_04655 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D IDM49_04650 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D IDM49_04645 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rter03000]
D IDM49_00655 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IDM49_00530 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D IDM49_02565 GyrI-like domain-containing protein K13653 K13653; AraC family transcriptional regulator
D IDM49_11060 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D IDM49_02000 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D IDM49_03085 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D IDM49_10455 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D IDM49_07770 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D IDM49_02370 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D IDM49_00690 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D IDM49_00295 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D IDM49_09975 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D IDM49_09415 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D IDM49_04535 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D IDM49_02835 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D IDM49_02465 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IDM49_09880 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D IDM49_02410 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D IDM49_11600 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D IDM49_11925 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D IDM49_08225 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D IDM49_02155 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D IDM49_01425 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D IDM49_08650 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D IDM49_10050 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D IDM49_07675 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IDM49_11515 peptidylprolyl isomerase K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D IDM49_00380 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D IDM49_08980 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D IDM49_04330 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D IDM49_00735 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D IDM49_12010 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D IDM49_12040 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D IDM49_00065 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IDM49_05760 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IDM49_09755 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D IDM49_08000 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D IDM49_06245 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D IDM49_09320 hypothetical protein K05346 deoR; deoxyribonucleoside regulator
D IDM49_07685 helix-turn-helix domain-containing protein K05346 deoR; deoxyribonucleoside regulator
D IDM49_06110 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D IDM49_07455 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D IDM49_07580 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rter03021]
D IDM49_03405 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IDM49_03185 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IDM49_03190 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IDM49_06155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IDM49_07355 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D IDM49_00715 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IDM49_04490 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IDM49_08345 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D IDM49_06105 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D IDM49_03030 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D IDM49_09075 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D IDM49_04595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rter03019]
D IDM49_05490 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D IDM49_05030 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IDM49_08245 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D IDM49_05290 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D IDM49_02880 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IDM49_01690 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IDM49_09125 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IDM49_08275 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IDM49_04595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IDM49_09430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IDM49_02055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_03530 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_02965 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IDM49_03430 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D IDM49_00015 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D IDM49_06725 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D IDM49_06380 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D IDM49_04550 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rter03011]
D IDM49_06835 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D IDM49_08465 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D IDM49_03255 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D IDM49_06050 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D IDM49_03350 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D IDM49_11240 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D IDM49_03200 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D IDM49_03335 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D IDM49_03425 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D IDM49_03220 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D IDM49_03400 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D IDM49_03195 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D IDM49_03395 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D IDM49_09630 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D IDM49_08280 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D IDM49_05110 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D IDM49_03270 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D IDM49_11230 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D IDM49_03245 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D IDM49_06215 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D IDM49_03040 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D IDM49_03240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D IDM49_03225 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D IDM49_03230 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D IDM49_03330 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D IDM49_03340 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D IDM49_11225 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D IDM49_03045 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D IDM49_03035 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D IDM49_03050 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D IDM49_03420 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D IDM49_03320 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D IDM49_03360 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D IDM49_03260 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D IDM49_03410 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D IDM49_03345 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D IDM49_05130 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D IDM49_08090 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D IDM49_05495 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D IDM49_03250 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D IDM49_03235 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D IDM49_03325 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D IDM49_05500 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D IDM49_09640 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D IDM49_03265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D IDM49_03355 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D IDM49_06495 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IDM49_05025 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D IDM49_09635 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D IDM49_00105 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D IDM49_08095 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D IDM49_10005 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IDM49_03390 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IDM49_08800 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D IDM49_00155 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_00190 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_07950 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_09715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_07960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_11130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_09725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_07955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_09720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_11125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rter03009]
D IDM49_05030 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IDM49_05290 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D IDM49_06275 GTPase Era K03595 era; GTPase
D IDM49_05505 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D IDM49_08345 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D IDM49_06105 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D IDM49_03030 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D IDM49_08940 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D IDM49_07115 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D IDM49_08165 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D IDM49_04460 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D IDM49_05000 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D IDM49_06255 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D IDM49_00080 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IDM49_07575 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D IDM49_08955 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D IDM49_07930 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D IDM49_09730 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D IDM49_05955 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D IDM49_03380 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D IDM49_02075 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D IDM49_09935 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IDM49_07840 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D IDM49_07485 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D IDM49_03505 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D IDM49_05120 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D IDM49_05490 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D IDM49_06070 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D IDM49_02880 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IDM49_04475 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IDM49_07825 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D IDM49_08160 hflX; GTPase HflX K03665 hflX; GTPase
D IDM49_04610 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IDM49_06010 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IDM49_08330 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D IDM49_08350 ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D IDM49_08570 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D IDM49_05535 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D IDM49_06265 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D IDM49_03710 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D IDM49_05020 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rter03016]
D IDM49_02735 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04910 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_08365 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IDM49_05455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IDM49_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IDM49_04880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IDM49_04570 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IDM49_10910 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IDM49_01550 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IDM49_06030 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IDM49_06065 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IDM49_08565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IDM49_05920 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IDM49_01385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IDM49_09735 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IDM49_05360 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IDM49_06025 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IDM49_08045 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IDM49_08040 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IDM49_07965 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IDM49_09215 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IDM49_06035 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D IDM49_06435 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D IDM49_09405 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D IDM49_03415 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D IDM49_08325 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D IDM49_04245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IDM49_04610 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IDM49_08190 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IDM49_00100 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D IDM49_05275 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D IDM49_04765 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D IDM49_07180 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D IDM49_07160 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D IDM49_01695 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D IDM49_08195 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D IDM49_05125 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D IDM49_04240 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D IDM49_08075 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D IDM49_09935 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IDM49_04250 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IDM49_02995 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D IDM49_01490 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D IDM49_03500 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D IDM49_03510 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D IDM49_03495 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D IDM49_08275 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rter03012]
D IDM49_08335 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D IDM49_08100 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D IDM49_08460 elongation factor Ts K02357 tsf; elongation factor Ts
D IDM49_03210 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IDM49_03205 fusA; elongation factor G K02355 fusA; elongation factor G
D IDM49_04600 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D IDM49_08450 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D IDM49_04605 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D IDM49_08795 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D IDM49_03385 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D IDM49_06100 efp; elongation factor P K02356 efp; elongation factor P
D IDM49_04440 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rter03110]
D IDM49_02270 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D IDM49_01565 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D IDM49_06905 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D IDM49_09430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IDM49_02055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_03530 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_09420 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D IDM49_06250 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IDM49_09425 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D IDM49_00590 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D IDM49_03525 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D IDM49_01500 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IDM49_04645 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IDM49_09610 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D IDM49_10025 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IDM49_00245 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IDM49_00040 trxA; thioredoxin K03671 TXN; thioredoxin
D IDM49_02865 trxA; thioredoxin K03671 TXN; thioredoxin
D IDM49_12080 trxA; thioredoxin K03671 TXN; thioredoxin
D IDM49_04705 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:rter04131]
D IDM49_05480 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IDM49_01050 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_06710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_09790 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IDM49_06880 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IDM49_09510 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rter04121]
D IDM49_06420 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:rter03051]
D IDM49_06430 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D IDM49_06415 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D IDM49_06400 WYL domain-containing protein K24033 pafBC; proteasome accessory factor BC
D IDM49_06425 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:rter03032]
D IDM49_02115 DUF4440 domain-containing protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IDM49_00655 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IDM49_09625 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D IDM49_00110 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IDM49_11185 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IDM49_08520 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IDM49_11235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_07480 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IDM49_00115 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IDM49_06210 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IDM49_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IDM49_04145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IDM49_10150 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IDM49_05145 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IDM49_08630 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IDM49_05420 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D IDM49_00135 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IDM49_07300 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IDM49_00130 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IDM49_07345 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IDM49_02590 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rter03036]
D IDM49_05905 GNAT family N-acetyltransferase K20791 NAA10_11; N-alpha-acetyltransferase 10/11 [EC:2.3.1.255]
D IDM49_00655 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IDM49_05030 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IDM49_01560 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D IDM49_09625 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D IDM49_00110 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IDM49_02255 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D IDM49_11060 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D IDM49_05055 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D IDM49_07850 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D IDM49_07845 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D IDM49_07565 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IDM49_08240 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IDM49_04340 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IDM49_07525 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D IDM49_07540 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D IDM49_07520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IDM49_07155 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D IDM49_07505 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D IDM49_07860 ParA family protein K03496 parA; chromosome partitioning protein
D IDM49_00070 ParA family protein K03496 parA; chromosome partitioning protein
D IDM49_07650 ParA family protein K03496 parA; chromosome partitioning protein
D IDM49_00065 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IDM49_05760 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IDM49_00080 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IDM49_05170 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D IDM49_07895 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D IDM49_02240 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D IDM49_04035 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D IDM49_10815 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D IDM49_06715 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rter03400]
D IDM49_07725 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D IDM49_02040 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IDM49_01585 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IDM49_02485 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IDM49_08070 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IDM49_10855 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IDM49_03005 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IDM49_03650 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IDM49_03885 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IDM49_07255 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D IDM49_07730 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D IDM49_07205 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D IDM49_05310 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IDM49_07735 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IDM49_05035 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IDM49_09930 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IDM49_05350 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IDM49_00970 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IDM49_05090 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IDM49_08630 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IDM49_02225 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IDM49_06745 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IDM49_06815 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D IDM49_06730 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D IDM49_02185 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_04160 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_04175 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IDM49_03185 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IDM49_03190 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IDM49_03405 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IDM49_06155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IDM49_08720 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IDM49_00660 restriction endonuclease K03573 mutH; DNA mismatch repair protein MutH
D IDM49_03670 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IDM49_03665 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IDM49_07480 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IDM49_00115 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IDM49_06210 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IDM49_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IDM49_04145 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IDM49_10150 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IDM49_11235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05420 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D IDM49_08215 recA; recombinase RecA K03553 recA; recombination protein RecA
D IDM49_05990 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IDM49_05995 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D IDM49_05985 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IDM49_06170 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D IDM49_04790 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D IDM49_04785 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D IDM49_01600 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D IDM49_00120 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D IDM49_04995 DEAD/DEAH box helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IDM49_06290 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IDM49_10155 recR; recombination protein RecR K06187 recR; recombination protein RecR
D IDM49_07920 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D IDM49_00135 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IDM49_07300 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IDM49_00130 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IDM49_07345 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IDM49_02590 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IDM49_09625 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D IDM49_01690 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IDM49_07590 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D IDM49_06660 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D IDM49_00060 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IDM49_06655 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IDM49_08145 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D IDM49_08210 regulatory protein RecX K03565 recX; regulatory protein
D IDM49_08155 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D IDM49_09925 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D IDM49_02960 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D IDM49_07900 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D IDM49_05875 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IDM49_01245 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IDM49_05885 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rter03029]
D IDM49_08335 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D IDM49_08100 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D IDM49_08460 elongation factor Ts K02357 tsf; elongation factor Ts
D IDM49_03210 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IDM49_03205 fusA; elongation factor G K02355 fusA; elongation factor G
D IDM49_06275 GTPase Era K03595 era; GTPase
D IDM49_07965 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IDM49_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IDM49_06030 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IDM49_08565 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IDM49_04570 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IDM49_08615 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IDM49_08610 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D IDM49_08620 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D IDM49_11235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_05315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IDM49_09430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IDM49_09425 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D IDM49_02055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_03530 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_03525 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D IDM49_09420 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D IDM49_06250 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IDM49_04245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IDM49_04035 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D IDM49_06665 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D IDM49_06645 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D IDM49_00090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rter02000]
D IDM49_08895 ABC transporter ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D IDM49_06570 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IDM49_06575 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IDM49_08430 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IDM49_02430 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IDM49_02435 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IDM49_07325 cydC; thiol reductant ABC exporter subunit CydC K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D IDM49_08915 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D IDM49_06770 ABC transporter ATP-binding protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D IDM49_03110 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D IDM49_03115 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D IDM49_10485 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IDM49_03655 hypothetical protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IDM49_10490 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IDM49_10495 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IDM49_10500 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D IDM49_00755 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IDM49_09170 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D IDM49_09160 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D IDM49_09155 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D IDM49_09165 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IDM49_01610 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IDM49_01615 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D IDM49_01620 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D IDM49_01625 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IDM49_04005 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D IDM49_04000 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D IDM49_03995 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D IDM49_04010 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D IDM49_10360 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IDM49_10355 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D IDM49_10350 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D IDM49_01960 methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D IDM49_01970 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D IDM49_01965 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D IDM49_10255 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D IDM49_10260 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D IDM49_10265 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D IDM49_02805 TIGR04028 family ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IDM49_04825 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IDM49_02800 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IDM49_02795 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IDM49_10275 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IDM49_02790 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IDM49_03305 fepB; Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D IDM49_10515 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D IDM49_09670 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D IDM49_03290 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein
D IDM49_09665 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D IDM49_10520 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D IDM49_03295 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D IDM49_09660 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D IDM49_10525 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D IDM49_03300 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IDM49_09655 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IDM49_06935 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D IDM49_06925 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D IDM49_06930 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D IDM49_06920 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D IDM49_01130 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D IDM49_01195 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D IDM49_01125 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D IDM49_01185 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D IDM49_06505 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D IDM49_01135 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D IDM49_01410 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D IDM49_01420 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D IDM49_01415 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D IDM49_06550 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D IDM49_06560 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D IDM49_06555 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D IDM49_09700 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D IDM49_09490 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D IDM49_09695 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D IDM49_09495 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IDM49_09690 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IDM49_09500 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D IDM49_04520 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D IDM49_04530 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D IDM49_04525 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D IDM49_01790 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D IDM49_01795 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D IDM49_09895 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D IDM49_10285 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_10290 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_00005 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_03700 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_04355 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_04715 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_06640 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IDM49_10280 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IDM49_00010 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IDM49_03705 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IDM49_04710 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IDM49_06635 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IDM49_06615 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D IDM49_00750 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D IDM49_00605 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D IDM49_10475 polysaccharide biosynthesis C-terminal domain-containing protein K26937 dinF; MATE family, multidrug efflux pump
D IDM49_10720 sugar porter family MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D IDM49_09315 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D IDM49_10395 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D IDM49_00825 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D IDM49_02065 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D IDM49_03165 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D IDM49_09470 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D IDM49_10775 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D IDM49_01685 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D IDM49_10760 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D IDM49_09545 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D IDM49_09390 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D IDM49_03930 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D IDM49_09510 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D IDM49_01240 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D IDM49_02015 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D IDM49_02020 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IDM49_03075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D IDM49_03070 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D IDM49_10235 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_10465 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_01395 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_07775 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D IDM49_03585 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D IDM49_02010 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IDM49_00375 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D IDM49_00370 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D IDM49_00365 manZ; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D IDM49_07910 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D IDM49_07905 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D IDM49_00430 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D IDM49_07700 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D IDM49_05070 ammonium transporter K03320 amt; ammonium transporter, Amt family
D IDM49_00050 formate/nitrite transporter family protein K06212 focA; formate transporter
D IDM49_03450 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D IDM49_03645 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D IDM49_01120 urea transporter K08717 utp; urea transporter
D IDM49_10535 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D IDM49_00400 CrcB family protein K06199 crcB; fluoride exporter
D IDM49_00405 CrcB family protein K06199 crcB; fluoride exporter
D IDM49_04515 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IDM49_04510 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IDM49_05405 SLC45 family MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D IDM49_03810 amino acid permease K11733 lysP; lysine-specific permease
D IDM49_09595 amino acid permease K11735 gabP; GABA permease
D IDM49_08150 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D IDM49_09395 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D IDM49_09360 amino acid permease K11738 ansP; L-asparagine permease
D IDM49_00435 amino acid permease K11738 ansP; L-asparagine permease
D IDM49_08285 amino acid permease K16234 hutT; histidine transporter
D IDM49_08475 arcD; arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D IDM49_01845 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D IDM49_12070 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D IDM49_03685 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D IDM49_11200 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D IDM49_01870 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D IDM49_02730 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D IDM49_02815 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D IDM49_03790 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D IDM49_00460 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D IDM49_02375 L-lactate permease K03303 lutP; lactate permease
D IDM49_07800 lactate permease LctP family transporter K03303 lutP; lactate permease
D IDM49_10680 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D IDM49_03945 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D IDM49_06820 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D IDM49_02725 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D IDM49_07865 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D IDM49_06600 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D IDM49_10895 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D IDM49_10900 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D IDM49_10665 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D IDM49_00320 cation:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D IDM49_00930 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D IDM49_02615 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D IDM49_00935 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D IDM49_02610 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D IDM49_07230 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D IDM49_07235 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D IDM49_00875 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D IDM49_04215 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D IDM49_09945 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D IDM49_11055 arsenic resistance protein K03325 ACR3; arsenite transporter
D IDM49_02405 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D IDM49_01150 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D IDM49_01155 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D IDM49_01160 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D IDM49_01165 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D IDM49_01170 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D IDM49_01175 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D IDM49_00025 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D IDM49_01455 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D IDM49_11065 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D IDM49_10045 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D IDM49_10040 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D IDM49_09085 AI-2E family transporter K20469 K20469; putative heme transporter
D IDM49_05770 hypothetical protein K16789 thiT; thiamine transporter
D IDM49_10030 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D IDM49_10635 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D IDM49_02250 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D IDM49_07540 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D IDM49_08065 FTR1 family protein K07243 FTR; high-affinity iron transporter
D IDM49_08060 EfeM/EfeO family lipoprotein K07224 efeO; iron uptake system component EfeO
D IDM49_08055 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D IDM49_02655 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D IDM49_03145 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03150 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_03160 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D IDM49_08820 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D IDM49_10055 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D IDM49_07080 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D IDM49_09950 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D IDM49_09615 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:rter02044]
D IDM49_09045 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IDM49_02500 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IDM49_04365 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IDM49_02505 hypothetical protein K12510 tadB; tight adherence protein B
D IDM49_04410 type II secretion system F family protein K12510 tadB; tight adherence protein B
D IDM49_04415 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IDM49_07500 YggT family protein K02221 yggT; YggT family protein
D IDM49_06195 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D IDM49_06200 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D IDM49_06205 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC
D IDM49_04290 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IDM49_06000 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IDM49_03025 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IDM49_06005 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IDM49_06695 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IDM49_03365 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IDM49_05095 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IDM49_05065 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IDM49_00090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IDM49_06390 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D IDM49_04030 twin-arginine translocase TatA/TatE family subunit K03117 tatB; sec-independent protein translocase protein TatB
D IDM49_06385 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rter02042]
D IDM49_04515 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IDM49_04510 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IDM49_09055 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rter02022]
D IDM49_09770 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D IDM49_09765 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D IDM49_04270 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D IDM49_04265 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D IDM49_00395 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IDM49_02125 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IDM49_00390 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D IDM49_02130 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D IDM49_01935 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D IDM49_03695 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IDM49_03690 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D IDM49_04325 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D IDM49_06865 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:rter02035]
D IDM49_10360 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IDM49_09045 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IDM49_02500 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IDM49_04365 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rter04812]
D IDM49_07520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IDM49_07860 ParA family protein K03496 parA; chromosome partitioning protein
D IDM49_00070 ParA family protein K03496 parA; chromosome partitioning protein
D IDM49_07650 ParA family protein K03496 parA; chromosome partitioning protein
D IDM49_00065 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IDM49_05760 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rter04147]
D IDM49_09125 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IDM49_01050 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_06710 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IDM49_06705 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IDM49_06880 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IDM49_00245 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IDM49_02055 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_03530 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IDM49_09430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IDM49_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IDM49_03540 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IDM49_03545 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IDM49_03210 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D IDM49_06470 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D IDM49_00750 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D IDM49_07990 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_01955 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_07625 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IDM49_03370 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IDM49_07975 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D IDM49_07980 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IDM49_07985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IDM49_00290 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IDM49_00780 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IDM49_07705 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IDM49_07415 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_07430 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IDM49_04125 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IDM49_04875 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IDM49_09250 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IDM49_07375 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IDM49_06680 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IDM49_06700 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IDM49_09790 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rter02048]
D IDM49_07035 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D IDM49_07025 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D IDM49_07020 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D IDM49_05420 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D IDM49_04395 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D IDM49_05415 DNA adenine methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D IDM49_04070 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D IDM49_00655 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IDM49_10810 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D IDM49_10805 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D IDM49_00845 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D IDM49_00840 ribbon-helix-helix protein, CopG family K26983 mazE3; antitoxin MazE3
D IDM49_11520 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D IDM49_11515 peptidylprolyl isomerase K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D IDM49_10820 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D IDM49_10825 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D IDM49_05830 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D IDM49_09280 plasmid stabilization protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D IDM49_02560 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D IDM49_07520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IDM49_02735 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04910 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IDM49_04245 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rter01504]
D IDM49_04165 macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase
D IDM49_10775 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D IDM49_01685 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rter03100]
D IDM49_00150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IDM49_05540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IDM49_00185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IDM49_09905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_05300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_02175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_04565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IDM49_08515 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IDM49_00960 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IDM49_12060 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IDM49_07135 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IDM49_04915 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IDM49_08910 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IDM49_00955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IDM49_04920 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IDM49_04925 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IDM49_06950 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_07140 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_07150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_09535 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IDM49_05285 tRNA-His K14226 tRNA-His; tRNA His
D IDM49_00145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IDM49_04830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_09100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_06475 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_06955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_06870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_10980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IDM49_01645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IDM49_04845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IDM49_04850 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IDM49_02890 tRNA-Met K14230 tRNA-Met; tRNA Met
D IDM49_04200 tRNA-Met K14230 tRNA-Met; tRNA Met
D IDM49_08495 tRNA-Ile K14230 tRNA-Met; tRNA Met
D IDM49_00965 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IDM49_07815 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IDM49_02420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IDM49_06945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IDM49_10140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_01755 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_01745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_01705 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IDM49_09685 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_01810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_02885 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_02895 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IDM49_03020 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IDM49_02860 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IDM49_05230 tRNA-Val K14237 tRNA-Val; tRNA Val
D IDM49_05235 tRNA-Val K14237 tRNA-Val; tRNA Val
D IDM49_07145 tRNA-Val K14237 tRNA-Val; tRNA Val
D IDM49_07960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_11130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_09725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IDM49_07955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_09720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_11125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IDM49_00155 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_00190 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_07950 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_09715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IDM49_10145 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D IDM49_05275 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D IDM49_04455 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D IDM49_04805 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D IDM49_07870 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IDM49_08305 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IDM49_09340 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IDM49_09345 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IDM49_05040 SDR family NAD(P)-dependent oxidoreductase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D IDM49_00940 FAD-binding protein K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D IDM49_10740 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D IDM49_08700 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D IDM49_08025 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D IDM49_01760 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D IDM49_07640 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D IDM49_05260 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D IDM49_07175 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D IDM49_09605 Dyp-type peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D IDM49_04835 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D IDM49_03800 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D IDM49_09980 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D IDM49_00350 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D IDM49_10605 carboxymuconolactone decarboxylase family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D IDM49_10610 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D IDM49_09875 hemin transporter K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D IDM49_01390 hemin transporter K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D IDM49_07465 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D IDM49_00920 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D IDM49_00270 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D IDM49_09820 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D IDM49_08415 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D IDM49_01945 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D IDM49_01655 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D IDM49_02970 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D IDM49_08530 hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D IDM49_05050 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D IDM49_03485 glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D IDM49_06965 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D IDM49_01030 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D IDM49_04990 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D IDM49_07425 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D IDM49_01595 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D IDM49_10840 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D IDM49_02415 low molecular weight phosphatase family protein K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D IDM49_07620 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D IDM49_10335 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D IDM49_05935 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D IDM49_10000 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D IDM49_04060 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D IDM49_01740 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D IDM49_08950 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D IDM49_10860 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D IDM49_04690 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D IDM49_05280 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IDM49_07125 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IDM49_03955 PIG-L family deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D IDM49_09065 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D IDM49_01830 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D IDM49_05045 alpha/beta fold hydrolase K25044 oleBC; cis-3-alkyl-4-acyloxetan-2-one decarboxylase / olefin beta-lactone synthetase [EC:4.1.1.114 6.1.3.1]
D IDM49_10930 alpha-keto acid decarboxylase family protein K21431 kdc; alpha-keto-acid decarboxylase [EC:4.1.1.-]
D IDM49_08175 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D IDM49_03470 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D IDM49_06450 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D IDM49_11630 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D IDM49_11895 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D IDM49_12035 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D IDM49_10230 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D IDM49_02620 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D IDM49_02380 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D IDM49_02385 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D IDM49_02390 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D IDM49_01005 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D IDM49_01045 ferredoxin K05337 fer; ferredoxin
D IDM49_08785 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D IDM49_06190 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D IDM49_05870 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D IDM49_07510 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D IDM49_00995 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D IDM49_08625 transglycosylase family protein K21687 rpfA; resuscitation-promoting factor RpfA
D IDM49_08920 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D IDM49_10880 DoxX family protein K15977 K15977; putative oxidoreductase
D IDM49_10885 DoxX family protein K15977 K15977; putative oxidoreductase
D IDM49_07470 hypothetical protein K15977 K15977; putative oxidoreductase
D IDM49_08575 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D IDM49_00580 cold-shock protein K03704 cspA; cold shock protein
D IDM49_05745 phage antirepressor KilAC domain-containing protein K07741 antB; anti-repressor protein
D IDM49_09370 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D IDM49_04745 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D IDM49_06940 trigger factor K03545 tig; trigger factor
D IDM49_01100 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D IDM49_01105 urease accessory protein UreF K03188 ureF; urease accessory protein
D IDM49_01110 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D IDM49_01115 urease accessory protein UreD K03190 ureD; urease accessory protein
D IDM49_04445 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D IDM49_05865 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D IDM49_05160 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D IDM49_08510 OsmC family protein K07397 yhfA; putative redox protein
D IDM49_03805 OsmC family protein K07397 yhfA; putative redox protein
D IDM49_02660 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D IDM49_08550 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D IDM49_05155 YraN family protein K07460 yraN; putative endonuclease
D IDM49_05165 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D IDM49_06040 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D IDM49_04225 PspA/IM30 family protein K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D IDM49_00760 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D IDM49_10020 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D IDM49_01020 CitMHS family transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D IDM49_01250 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D IDM49_00165 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D IDM49_01630 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D IDM49_11085 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D IDM49_02775 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D IDM49_10945 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D IDM49_03215 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D IDM49_10615 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D IDM49_08875 glycosyltransferase K06320 cgeB; spore maturation protein CgeB
D IDM49_00085 RNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D IDM49_03950 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D IDM49_09840 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D IDM49_06260 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D IDM49_02850 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D IDM49_08580 lysozyme K07273 acm; lysozyme
C 99994 Others
D IDM49_09775 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D IDM49_10245 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D IDM49_10250 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D IDM49_02530 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D IDM49_05335 globin K06886 glbN; hemoglobin
D IDM49_02350 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D IDM49_02400 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D IDM49_06625 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D IDM49_06620 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D IDM49_04815 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D IDM49_01735 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D IDM49_02570 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D IDM49_01680 VTT domain-containing protein K03975 dedA; membrane-associated protein
D IDM49_00615 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D IDM49_01825 DUF202 domain-containing protein K00389 yidH; putative membrane protein
D IDM49_01535 PH domain-containing protein K08981 K08981; putative membrane protein
D IDM49_07740 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D IDM49_00905 YagU family protein K08996 yagU; putative membrane protein
D IDM49_00865 YchJ family protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D IDM49_07995 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D IDM49_07165 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D IDM49_05115 RNA-binding protein K06960 K06960; uncharacterized protein
D IDM49_08385 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D IDM49_07805 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D IDM49_02535 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D IDM49_02585 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D IDM49_06565 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D IDM49_10960 TIGR01777 family protein K07071 K07071; uncharacterized protein
D IDM49_00800 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D IDM49_08360 TSUP family transporter K07090 K07090; uncharacterized protein
D IDM49_09865 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D IDM49_05395 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D IDM49_07810 PhoX family phosphatase K07093 K07093; uncharacterized protein
D IDM49_02440 metallophosphoesterase K07098 K07098; uncharacterized protein
D IDM49_09845 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D IDM49_06810 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D IDM49_09275 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D IDM49_10545 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D IDM49_01650 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D IDM49_00095 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D IDM49_04195 UPF0182 family protein K09118 K09118; uncharacterized protein
D IDM49_09835 PFL family protein K09157 K09157; uncharacterized protein
D IDM49_01530 PH domain-containing protein K09167 K09167; uncharacterized protein
D IDM49_08655 hypothetical protein K09780 K09780; uncharacterized protein
D IDM49_09325 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D IDM49_10650 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D IDM49_05270 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D IDM49_10570 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D IDM49_06235 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D IDM49_00880 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein
D IDM49_01635 phosphate transport regulator K07220 K07220; uncharacterized protein
D IDM49_08340 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024